Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:36:34 (1212342): wrapper (7.7.26015): starting
23:36:34 (1212342): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 23:36:34] Arguments: --nthreads 8
[2025-11-20 23:36:34] Threads: 8
[2025-11-20 23:36:34] Checking for CVMFS
[2025-11-20 23:36:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:36:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:36:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:36:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:36:35] 2.13.2.0 8649 25238 171364 153108 3 145 24105902 39288833 5795 16776704 0 12741576 99.482 13935790 29104 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 23:36:35] CVMFS is ok
[2025-11-20 23:36:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 23:36:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 23:36:35] Further information can be found at the LHC@home message board.
[2025-11-20 23:36:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:36:35] Checking for apptainer binary...
[2025-11-20 23:36:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:36:35] Running /usr/bin/apptainer --version
[2025-11-20 23:36:35] apptainer version 1.4.4-1.el9
[2025-11-20 23:36:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:36:36] c-211-23.aglt2.org
[2025-11-20 23:36:36] apptainer works
[2025-11-20 23:36:36] Set ATHENA_PROC_NUMBER=8
[2025-11-20 23:36:36] Set ATHENA_CORE_NUMBER=8
[2025-11-20 23:36:36] Starting ATLAS job with PandaID=6893876393
[2025-11-20 23:36:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:23:49]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:23:49] 2025-11-23 04:23:09,655 | INFO     | monitor loop #7834: job 0:6893876393 is in state 'finished'
[2025-11-22 23:23:49] 2025-11-23 04:23:09,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:23:49] 2025-11-23 04:23:10,606 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 23:23:49] 2025-11-23 04:23:10,617 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9792500000003
[2025-11-22 23:23:49] 2025-11-23 04:23:10,625 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6893876393/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 23:23:49] 2025-11-23 04:23:10,630 | INFO     | extracted standard info from prmon json
[2025-11-22 23:23:49] 2025-11-23 04:23:10,630 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 23:23:49] 2025-11-23 04:23:10,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 23:23:49] 2025-11-23 04:23:10,705 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:23:49] 2025-11-23 04:23:10,713 | INFO     | sum of square deviations: 6932607276121.933
[2025-11-22 23:23:49] 2025-11-23 04:23:10,952 | INFO     | sum of deviations: 13095551466426.68
[2025-11-22 23:23:49] 2025-11-23 04:23:10,952 | INFO     | mean x: 1763785872.1306355
[2025-11-22 23:23:49] 2025-11-23 04:23:10,953 | INFO     | mean y: 3003860.313454029
[2025-11-22 23:23:49] 2025-11-23 04:23:10,953 | INFO     | intersect: -3328751097.709175
[2025-11-22 23:23:49] 2025-11-23 04:23:10,956 | INFO     | chi2: 13.080468306846027
[2025-11-22 23:23:49] 2025-11-23 04:23:10,961 | INFO     | sum of square deviations: 6895768934837.233
[2025-11-22 23:23:49] 2025-11-23 04:23:11,406 | INFO     | time since job start (171937s) is within the limit (172800.0s)
[2025-11-22 23:23:49] 2025-11-23 04:23:11,520 | INFO     | sum of deviations: 14087209742550.172
[2025-11-22 23:23:49] 2025-11-23 04:23:11,521 | INFO     | mean x: 1763785719.6433144
[2025-11-22 23:23:49] 2025-11-23 04:23:11,521 | INFO     | mean y: 3007965.0021337126
[2025-11-22 23:23:49] 2025-11-23 04:23:11,521 | INFO     | intersect: -3600189823.137884
[2025-11-22 23:23:49] 2025-11-23 04:23:11,568 | INFO     | chi2: 9.939895790042627
[2025-11-22 23:23:49] 2025-11-23 04:23:11,568 | INFO     | current chi2=9.939895790042627 (change=24.009633624200553 %)
[2025-11-22 23:23:49] 2025-11-23 04:23:11,568 | INFO     | right removable region: 2811
[2025-11-22 23:23:49] 2025-11-23 04:23:11,665 | INFO     | sum of square deviations: 6895756681767.231
[2025-11-22 23:23:49] 2025-11-23 04:23:12,234 | INFO     | monitor loop #7835: job 0:6893876393 is in state 'finished'
[2025-11-22 23:23:49] 2025-11-23 04:23:12,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:23:49] 2025-11-23 04:23:12,845 | INFO     | sum of deviations: 11980027259087.406
[2025-11-22 23:23:49] 2025-11-23 04:23:12,846 | INFO     | mean x: 1763786024.6433144
[2025-11-22 23:23:49] 2025-11-23 04:23:12,846 | INFO     | mean y: 3008476.6913229018
[2025-11-22 23:23:49] 2025-11-23 04:23:12,846 | INFO     | intersect: -3061224446.4763064
[2025-11-22 23:23:49] 2025-11-23 04:23:12,850 | INFO     | chi2: 9.376486794922503
[2025-11-22 23:23:49] 2025-11-23 04:23:12,851 | INFO     | current chi2=9.376486794922503 (change=28.316887629970733 %)
[2025-11-22 23:23:49] 2025-11-23 04:23:12,856 | INFO     | sum of square deviations: 6859037223286.2705
[2025-11-22 23:23:49] 2025-11-23 04:23:13,501 | INFO     | time since job start (171939s) is within the limit (172800.0s)
[2025-11-22 23:23:49] 2025-11-23 04:23:13,510 | INFO     | sum of deviations: 11437539416830.871
[2025-11-22 23:23:49] 2025-11-23 04:23:13,511 | INFO     | mean x: 1763786177.155326
[2025-11-22 23:23:49] 2025-11-23 04:23:13,511 | INFO     | mean y: 3010728.9383683647
[2025-11-22 23:23:49] 2025-11-23 04:23:13,511 | INFO     | intersect: -2938127111.163643
[2025-11-22 23:23:49] 2025-11-23 04:23:13,515 | INFO     | chi2: 8.446505081895888
[2025-11-22 23:23:49] 2025-11-23 04:23:13,515 | INFO     | current chi2=8.446505081895888 (change=9.918231992074187 %)
[2025-11-22 23:23:49] 2025-11-23 04:23:13,516 | INFO     | left removable region: 20
[2025-11-22 23:23:49] 2025-11-23 04:23:13,520 | INFO     | sum of square deviations: 6742426492314.296
[2025-11-22 23:23:49] 2025-11-23 04:23:13,805 | INFO     | sum of deviations: 12205900270474.36
[2025-11-22 23:23:49] 2025-11-23 04:23:13,805 | INFO     | mean x: 1763786299.1927624
[2025-11-22 23:23:49] 2025-11-23 04:23:13,806 | INFO     | mean y: 3017562.207452526
[2025-11-22 23:23:49] 2025-11-23 04:23:13,806 | INFO     | intersect: -3189987165.529127
[2025-11-22 23:23:49] 2025-11-23 04:23:13,809 | INFO     | chi2: 4.44408695331767
[2025-11-22 23:23:49] 2025-11-23 04:23:13,810 | INFO     | current memory leak: 1.81 B/s (using 2791 data points, chi2=4.44)
[2025-11-22 23:23:49] 2025-11-23 04:23:13,813 | INFO     | could have reported an average CPU frequency of 2899 MHz (96 samples)
[2025-11-22 23:23:49] 2025-11-23 04:23:13,813 | INFO     | ..............................
[2025-11-22 23:23:49] 2025-11-23 04:23:13,814 | INFO     | . Timing measurements:
[2025-11-22 23:23:49] 2025-11-23 04:23:13,814 | INFO     | . get job = 0 s
[2025-11-22 23:23:49] 2025-11-23 04:23:13,814 | INFO     | . initial setup = 3 s
[2025-11-22 23:23:49] 2025-11-23 04:23:13,814 | INFO     | . payload setup = 38 s
[2025-11-22 23:23:49] 2025-11-23 04:23:13,814 | INFO     | . stage-in = 0 s
[2025-11-22 23:23:49] 2025-11-23 04:23:13,814 | INFO     | . payload execution = 171806 s
[2025-11-22 23:23:49] 2025-11-23 04:23:13,814 | INFO     | . stage-out = 13 s
[2025-11-22 23:23:49] 2025-11-23 04:23:13,815 | INFO     | . log creation = 4 s
[2025-11-22 23:23:49] 2025-11-23 04:23:13,815 | INFO     | ..............................
[2025-11-22 23:23:49] 2025-11-23 04:23:13,976 | INFO     | 
[2025-11-22 23:23:49] 2025-11-23 04:23:13,978 | INFO     | job summary report
[2025-11-22 23:23:49] 2025-11-23 04:23:13,978 | INFO     | --------------------------------------------------
[2025-11-22 23:23:49] 2025-11-23 04:23:13,978 | INFO     | PanDA job id: 6893876393
[2025-11-22 23:23:49] 2025-11-23 04:23:13,978 | INFO     | task id: 47523449
[2025-11-22 23:23:49] 2025-11-23 04:23:13,978 | INFO     | errors: (none)
[2025-11-22 23:23:49] 2025-11-23 04:23:13,978 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:23:49] 2025-11-23 04:23:13,978 | INFO     | pilot state: finished 
[2025-11-22 23:23:49] 2025-11-23 04:23:13,979 | INFO     | transexitcode: 0
[2025-11-22 23:23:49] 2025-11-23 04:23:13,979 | INFO     | exeerrorcode: 0
[2025-11-22 23:23:49] 2025-11-23 04:23:13,979 | INFO     | exeerrordiag: 
[2025-11-22 23:23:49] 2025-11-23 04:23:13,979 | INFO     | exitcode: 0
[2025-11-22 23:23:49] 2025-11-23 04:23:13,979 | INFO     | exitmsg: OK
[2025-11-22 23:23:49] 2025-11-23 04:23:13,979 | INFO     | cpuconsumptiontime: 503100 s
[2025-11-22 23:23:49] 2025-11-23 04:23:13,979 | INFO     | nevents: 1000
[2025-11-22 23:23:49] 2025-11-23 04:23:13,980 | INFO     | neventsw: 0
[2025-11-22 23:23:49] 2025-11-23 04:23:13,980 | INFO     | pid: 1223901
[2025-11-22 23:23:49] 2025-11-23 04:23:13,980 | INFO     | pgrp: 1223901
[2025-11-22 23:23:49] 2025-11-23 04:23:13,980 | INFO     | corecount: 8
[2025-11-22 23:23:49] 2025-11-23 04:23:13,980 | INFO     | event service: False
[2025-11-22 23:23:49] 2025-11-23 04:23:13,980 | INFO     | sizes: {0: 2298585, 1: 2298613, 2: 2298812, 13: 2298812, 24: 2298868, 26: 2299158, 35: 2299314, 171847: 2397281, 171848: 2397280, 171862: 2406330, 171863: 2406386,
[2025-11-22 23:23:49] 2025-11-23 04:23:13,980 | INFO     | --------------------------------------------------
[2025-11-22 23:23:49] 2025-11-23 04:23:13,981 | INFO     | 
[2025-11-22 23:23:49] 2025-11-23 04:23:13,981 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-22 23:23:49] 2025-11-23 04:23:14,281 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,281 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,281 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,281 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:23:49] 2025-11-23 04:23:14,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:23:49] 2025-11-23 04:23:14,288 | INFO     | job 6893876393 has completed (purged errors)
[2025-11-22 23:23:49] 2025-11-23 04:23:14,288 | INFO     | overall cleanup function is called
[2025-11-22 23:23:49] 2025-11-23 04:23:15,321 | INFO     | --- collectZombieJob: --- 10, [1223901]
[2025-11-22 23:23:49] 2025-11-23 04:23:15,321 | INFO     | zombie collector waiting for pid 1223901
[2025-11-22 23:23:49] 2025-11-23 04:23:15,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:23:49] 2025-11-23 04:23:15,322 | INFO     | collected zombie processes
[2025-11-22 23:23:49] 2025-11-23 04:23:15,322 | INFO     | will attempt to kill all subprocesses of pid=1223901
[2025-11-22 23:23:49] 2025-11-23 04:23:15,584 | INFO     | PID=1216120 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-22 23:23:49] 2025-11-23 04:23:15,584 | INFO     | .. there are 30 such processes running
[2025-11-22 23:23:49] 2025-11-23 04:23:18,229 | INFO     | process IDs to be killed: [1223901] (in reverse order)
[2025-11-22 23:23:49] 2025-11-23 04:23:18,548 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:23:49] 2025-11-23 04:23:18,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:23:49] 2025-11-23 04:23:18,691 | INFO     | did not find any defunct processes belonging to 1223901
[2025-11-22 23:23:49] 2025-11-23 04:23:18,782 | INFO     | did not find any defunct processes belonging to 1223901
[2025-11-22 23:23:49] 2025-11-23 04:23:18,787 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:23:49] 2025-11-23 04:23:18,787 | INFO     | ready for new job
[2025-11-22 23:23:49] 2025-11-23 04:23:18,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:23:49] 2025-11-23 04:23:18,809 | INFO     | ***************************************
[2025-11-22 23:23:49] 2025-11-23 04:23:18,809 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:23:49] 2025-11-23 04:23:18,809 | INFO     | ***************************************
[2025-11-22 23:23:49] 2025-11-23 04:23:18,809 | INFO     | 
[2025-11-22 23:23:49] 2025-11-23 04:23:18,811 | INFO     | architecture information:
[2025-11-22 23:23:49] 2025-11-23 04:23:18,815 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:23:49] 2025-11-23 04:23:18,883 | INFO     | cat /etc/os-release:
[2025-11-22 23:23:49] NAME="CentOS Linux"
[2025-11-22 23:23:49] VERSION="7 (Core)"
[2025-11-22 23:23:49] ID="centos"
[2025-11-22 23:23:49] ID_LIKE="rhel fedora"
[2025-11-22 23:23:49] VERSION_ID="7"
[2025-11-22 23:23:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:23:49] ANSI_COLOR="0;31"
[2025-11-22 23:23:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:23:49] HOME_URL="https://www.centos.org/"
[2025-11-22 23:23:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:23:49] 
[2025-11-22 23:23:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:23:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:23:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:23:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:23:49] 
[2025-11-22 23:23:49] 2025-11-23 04:23:18,884 | INFO     | ***************************************
[2025-11-22 23:23:49] 2025-11-23 04:23:19,387 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-22 23:23:49] 2025-11-23 04:23:19,519 | INFO     | sufficient remaining disk space (50102009856 B)
[2025-11-22 23:23:49] 2025-11-23 04:23:19,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:23:49] 2025-11-23 04:23:19,520 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:23:49] 2025-11-23 04:23:19,520 | INFO     | update_server=False
[2025-11-22 23:23:49] 2025-11-23 04:23:19,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:23:49] 2025-11-23 04:23:19,520 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:23:49] 2025-11-23 04:23:19,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:23:49] 2025-11-23 04:23:19,823 | INFO     | all payload control threads have been joined
[2025-11-22 23:23:49] 2025-11-23 04:23:19,839 | INFO     | all data control threads have been joined
[2025-11-22 23:23:49] 2025-11-23 04:23:19,856 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 23:23:49] 2025-11-23 04:23:19,857 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 23:23:49] 2025-11-23 04:23:19,857 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:23:49] 2025-11-23 04:23:19,857 | INFO     | will abort loop
[2025-11-22 23:23:49] 2025-11-23 04:23:20,526 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:20,551 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:20,685 | INFO     | all job control threads have been joined
[2025-11-22 23:23:49] 2025-11-23 04:23:20,700 | INFO     | [job] validate thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:20,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:20,832 | INFO     | [payload] control thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:20,863 | INFO     | [data] control thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:20,875 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:21,086 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:21,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:23:49] 2025-11-23 04:23:21,339 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:21,566 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:21,567 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:21,697 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:21,712 | INFO     | [job] control thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:21,796 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:21,830 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:25,320 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:23:49] 2025-11-23 04:23:33,437 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:23:49] 2025-11-23 04:23:33,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140593540745024)>', '<ExcThread(monitor, started 140593036506880)>']
[2025-11-22 23:23:49] 2025-11-23 04:23:38,642 | INFO     | all workflow threads have been joined
[2025-11-22 23:23:49] 2025-11-23 04:23:38,643 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:23:49] 2025-11-23 04:23:38,643 | INFO     | traces error code: 0
[2025-11-22 23:23:49] 2025-11-23 04:23:38,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:23:49] 2025-11-23 04:23:48,595 | INFO     | PID=1216120 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 23:23:49] 2025-11-23 04:23:48,596 | INFO     | .. there are 30 such processes running
[2025-11-22 23:23:49] 2025-11-23 04:23:48,597 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:23:49] 2025-11-23 04:23:48,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:23:49] 2025-11-23 04:23:48,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:23:49] 2025-11-23 04:23:48,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:23:49] 2025-11-23 04:23:48,598 | INFO     | [monitor] control thread has ended
[2025-11-22 23:23:49] 2025-11-23 04:23:48,968 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:23:49] 2025-11-23 04:23:48,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:23:49] 2025-11-23 04:23:48,989 [wrapper] pilotpid: 1216120
[2025-11-22 23:23:49] 2025-11-23 04:23:48,993 [wrapper] Pilot exit status: 0
[2025-11-22 23:23:49] 2025-11-23 04:23:49,064 [wrapper] pandaids: 6893876393
[2025-11-22 23:23:49] 2025-11-23 04:23:49,649 [wrapper] cleanup supervisor_pilot 2804139 1216121
[2025-11-22 23:23:49] 2025-11-23 04:23:49,681 [wrapper] Test setup, not cleaning
[2025-11-22 23:23:49] 2025-11-23 04:23:49,689 [wrapper] apfmon messages muted
[2025-11-22 23:23:49] 2025-11-23 04:23:49,692 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:23:49] 2025-11-23 04:23:49,695 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:23:49]  *** Error codes and diagnostics ***
[2025-11-22 23:23:50]     "exeErrorCode": 0,
[2025-11-22 23:23:50]     "exeErrorDiag": "",
[2025-11-22 23:23:50]     "pilotErrorCode": 0,
[2025-11-22 23:23:50]     "pilotErrorDiag": "",
[2025-11-22 23:23:50]  *** Listing of results directory ***
[2025-11-22 23:23:50] total 1358968
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 11:47 pilot3.tar.gz
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 11:53 queuedata.json
[2025-11-22 23:23:50] -rwx------. 1 boincer umatlas     36292 Nov 20 11:53 runpilot2-wrapper.sh
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas       100 Nov 20 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:23:50] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 23:36 run_atlas
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas       105 Nov 20 23:36 job.xml
[2025-11-22 23:23:50] -rw-r--r--. 2 boincer umatlas 413367970 Nov 20 23:36 EVNT.47493127._000752.pool.root.1
[2025-11-22 23:23:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:36 start_atlas.sh
[2025-11-22 23:23:50] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 23:36 shared
[2025-11-22 23:23:50] -rw-r--r--. 2 boincer umatlas    590099 Nov 20 23:36 input.tar.gz
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas         0 Nov 20 23:36 boinc_lockfile
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas      2785 Nov 20 23:36 pandaJob.out
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas        57 Nov 20 23:36 setup.sh.local
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas    989817 Nov 20 23:37 agis_schedconf.cvmfs.json
[2025-11-22 23:23:50] drwx------. 5 boincer umatlas      4096 Nov 20 23:37 pilot3
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas       534 Nov 22 23:02 boinc_task_state.xml
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas      6526 Nov 22 23:20 init_data.xml
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas 931479371 Nov 22 23:21 HITS.47523449._007520.pool.root.1
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas      1061 Nov 22 23:22 memory_monitor_summary.json
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas   1526164 Nov 22 23:22 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas   3205239 Nov 22 23:22 log.47523449._007520.job.log.tgz.1
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas      8617 Nov 22 23:23 heartbeat.json
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 23:23 boinc_mmap_file
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas        30 Nov 22 23:23 wrapper_checkpoint.txt
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas        95 Nov 22 23:23 pilot_heartbeat.json
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas       823 Nov 22 23:23 pilotlog.txt
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas  18202333 Nov 22 23:23 log.47523449._007520.job.log.1
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas       353 Nov 22 23:23 output.list
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas       620 Nov 22 23:23 runtime_log
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas  21432320 Nov 22 23:23 result.tar.gz
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas      9344 Nov 22 23:23 runtime_log.err
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas       665 Nov 22 23:23 DvNMDms5Mg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCLIKDmGZF3Bo.diag
[2025-11-22 23:23:50] -rw-r--r--. 1 boincer umatlas     21651 Nov 22 23:23 stderr.txt
[2025-11-22 23:23:50] HITS file was successfully produced:
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas 931479371 Nov 22 23:21 shared/HITS.pool.root.1
[2025-11-22 23:23:50]  *** Contents of shared directory: ***
[2025-11-22 23:23:50] total 1334860
[2025-11-22 23:23:50] -rw-r--r--. 2 boincer umatlas 413367970 Nov 20 23:36 ATLAS.root_0
[2025-11-22 23:23:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:36 start_atlas.sh
[2025-11-22 23:23:50] -rw-r--r--. 2 boincer umatlas    590099 Nov 20 23:36 input.tar.gz
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas 931479371 Nov 22 23:21 HITS.pool.root.1
[2025-11-22 23:23:50] -rw-------. 1 boincer umatlas  21432320 Nov 22 23:23 result.tar.gz
23:23:51 (1212342): run_atlas exited; CPU time 508776.880520
23:23:51 (1212342): called boinc_finish(0)

</stderr_txt>
]]>

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