Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:05:10 (1301486): wrapper (7.7.26015): starting
23:05:10 (1301486): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 23:05:10] Arguments: --nthreads 4
[2025-11-23 23:05:10] Threads: 4
[2025-11-23 23:05:10] Checking for CVMFS
[2025-11-23 23:05:10] No cvmfs_config command found, will try listing directly
[2025-11-23 23:05:10] CVMFS is ok
[2025-11-23 23:05:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 23:05:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 23:05:10] Further information can be found at the LHC@home message board.
[2025-11-23 23:05:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 23:05:10] Checking for apptainer binary...
[2025-11-23 23:05:10] which: no apptainer in ((null))
[2025-11-23 23:05:10] apptainer is not installed, using version from CVMFS
[2025-11-23 23:05:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 23:05:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-11-23 23:05:10] apptainer works
[2025-11-23 23:05:10] Set ATHENA_PROC_NUMBER=4
[2025-11-23 23:05:10] Set ATHENA_CORE_NUMBER=4
[2025-11-23 23:05:10] Starting ATLAS job with PandaID=6893876483
[2025-11-23 23:05:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 16:08:48]  *** The last 200 lines of the pilot log: ***
[2025-11-24 16:08:48] 2025-11-24 15:00:06,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 16:08:48] 2025-11-24 15:00:07,490 | INFO     | PID=1306037 has CPU usage=19.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 16:08:48] 2025-11-24 15:00:07,490 | INFO     | .. there are 5 such processes running
[2025-11-24 16:08:48] 2025-11-24 15:00:07,868 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 16:08:48] 2025-11-24 15:00:07,878 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2745.384640625001
[2025-11-24 16:08:48] 2025-11-24 15:00:07,890 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6893876483/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 16:08:48] 2025-11-24 15:00:07,891 | INFO     | extracted standard info from prmon json
[2025-11-24 16:08:48] 2025-11-24 15:00:07,891 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 16:08:48] 2025-11-24 15:00:07,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 16:08:48] 2025-11-24 15:00:07,910 | INFO     | fitting pss+swap vs Time
[2025-11-24 16:08:48] 2025-11-24 15:00:07,911 | INFO     | sum of square deviations: 308226549180.9702
[2025-11-24 16:08:48] 2025-11-24 15:00:07,933 | INFO     | sum of deviations: 1148330311094.7935
[2025-11-24 16:08:48] 2025-11-24 15:00:07,933 | INFO     | mean x: 1763965956.523046
[2025-11-24 16:08:48] 2025-11-24 15:00:07,933 | INFO     | mean y: 2284991.3567134268
[2025-11-24 16:08:48] 2025-11-24 15:00:07,933 | INFO     | intersect: -6569555043.180438
[2025-11-24 16:08:48] 2025-11-24 15:00:07,935 | INFO     | chi2: 4.124914456070771
[2025-11-24 16:08:48] 2025-11-24 15:00:07,936 | INFO     | sum of square deviations: 303617065118.46735
[2025-11-24 16:08:48] 2025-11-24 15:00:07,958 | INFO     | sum of deviations: 1361326245179.2554
[2025-11-24 16:08:48] 2025-11-24 15:00:07,958 | INFO     | mean x: 1763965804.0231621
[2025-11-24 16:08:48] 2025-11-24 15:00:07,958 | INFO     | mean y: 2292031.988922457
[2025-11-24 16:08:48] 2025-11-24 15:00:07,958 | INFO     | intersect: -7906792207.6551485
[2025-11-24 16:08:48] 2025-11-24 15:00:07,960 | INFO     | chi2: 1.7823196200657276
[2025-11-24 16:08:48] 2025-11-24 15:00:07,960 | INFO     | current chi2=1.7823196200657276 (change=56.791355577262216 %)
[2025-11-24 16:08:48] 2025-11-24 15:00:07,961 | INFO     | sum of square deviations: 299053767968.4647
[2025-11-24 16:08:48] 2025-11-24 15:00:07,982 | INFO     | sum of deviations: 1343590820734.3994
[2025-11-24 16:08:48] 2025-11-24 15:00:07,983 | INFO     | mean x: 1763965651.5232794
[2025-11-24 16:08:48] 2025-11-24 15:00:07,983 | INFO     | mean y: 2291439.3087044535
[2025-11-24 16:08:48] 2025-11-24 15:00:07,983 | INFO     | intersect: -7922865543.590018
[2025-11-24 16:08:48] 2025-11-24 15:00:07,984 | INFO     | chi2: 1.7822366051289045
[2025-11-24 16:08:48] 2025-11-24 15:00:07,984 | INFO     | current chi2=1.7822366051289045 (change=0.004657690791739451 %)
[2025-11-24 16:08:48] 2025-11-24 15:00:07,984 | INFO     | right removable region: 987
[2025-11-24 16:08:48] 2025-11-24 15:00:07,986 | INFO     | sum of square deviations: 303617051088.4674
[2025-11-24 16:08:48] 2025-11-24 15:00:08,006 | INFO     | sum of deviations: 979598740037.3336
[2025-11-24 16:08:48] 2025-11-24 15:00:08,007 | INFO     | mean x: 1763966109.0231621
[2025-11-24 16:08:48] 2025-11-24 15:00:08,007 | INFO     | mean y: 2290563.072507553
[2025-11-24 16:08:48] 2025-11-24 15:00:08,007 | INFO     | intersect: -5689020157.695122
[2025-11-24 16:08:48] 2025-11-24 15:00:08,008 | INFO     | chi2: 2.4647510570956115
[2025-11-24 16:08:48] 2025-11-24 15:00:08,008 | INFO     | current chi2=2.4647510570956115 (change=40.24722007342098 %)
[2025-11-24 16:08:48] 2025-11-24 15:00:08,010 | INFO     | sum of square deviations: 299053739908.4647
[2025-11-24 16:08:48] 2025-11-24 15:00:08,030 | INFO     | sum of deviations: 936302585084.6428
[2025-11-24 16:08:48] 2025-11-24 15:00:08,031 | INFO     | mean x: 1763966261.5232794
[2025-11-24 16:08:48] 2025-11-24 15:00:08,031 | INFO     | mean y: 2292009.863360324
[2025-11-24 16:08:48] 2025-11-24 15:00:08,031 | INFO     | intersect: -5520481827.279984
[2025-11-24 16:08:48] 2025-11-24 15:00:08,032 | INFO     | chi2: 2.43108407916814
[2025-11-24 16:08:48] 2025-11-24 15:00:08,032 | INFO     | current chi2=2.43108407916814 (change=1.365938269122554 %)
[2025-11-24 16:08:48] 2025-11-24 15:00:08,033 | INFO     | left removable region: 20
[2025-11-24 16:08:48] 2025-11-24 15:00:08,034 | INFO     | sum of square deviations: 280386976432.45294
[2025-11-24 16:08:48] 2025-11-24 15:00:08,054 | INFO     | sum of deviations: 1066628013337.5841
[2025-11-24 16:08:48] 2025-11-24 15:00:08,054 | INFO     | mean x: 1763966231.0237849
[2025-11-24 16:08:48] 2025-11-24 15:00:08,055 | INFO     | mean y: 2300616.4963805582
[2025-11-24 16:08:48] 2025-11-24 15:00:08,055 | INFO     | intersect: -6708053125.788615
[2025-11-24 16:08:48] 2025-11-24 15:00:08,056 | INFO     | chi2: 0.05829598679857105
[2025-11-24 16:08:48] 2025-11-24 15:00:08,056 | INFO     | current memory leak: 3.80 B/s (using 967 data points, chi2=0.06)
[2025-11-24 16:08:48] 2025-11-24 15:00:08,057 | INFO     | could have reported an average CPU frequency of 2663 MHz (37 samples)
[2025-11-24 16:08:48] 2025-11-24 15:00:08,058 | INFO     | ..............................
[2025-11-24 16:08:48] 2025-11-24 15:00:08,058 | INFO     | . Timing measurements:
[2025-11-24 16:08:48] 2025-11-24 15:00:08,058 | INFO     | . get job = 0 s
[2025-11-24 16:08:48] 2025-11-24 15:00:08,058 | INFO     | . initial setup = 1 s
[2025-11-24 16:08:48] 2025-11-24 15:00:08,058 | INFO     | . payload setup = 5 s
[2025-11-24 16:08:48] 2025-11-24 15:00:08,058 | INFO     | . stage-in = 0 s
[2025-11-24 16:08:48] 2025-11-24 15:00:08,058 | INFO     | . payload execution = 60850 s
[2025-11-24 16:08:48] 2025-11-24 15:00:08,058 | INFO     | . stage-out = 2 s
[2025-11-24 16:08:48] 2025-11-24 15:00:08,058 | INFO     | . log creation = 0 s
[2025-11-24 16:08:48] 2025-11-24 15:00:08,058 | INFO     | ..............................
[2025-11-24 16:08:48] 2025-11-24 15:00:08,161 | INFO     | 
[2025-11-24 16:08:48] 2025-11-24 15:00:08,162 | INFO     | job summary report
[2025-11-24 16:08:48] 2025-11-24 15:00:08,162 | INFO     | --------------------------------------------------
[2025-11-24 16:08:48] 2025-11-24 15:00:08,162 | INFO     | PanDA job id: 6893876483
[2025-11-24 16:08:48] 2025-11-24 15:00:08,162 | INFO     | task id: 47523449
[2025-11-24 16:08:48] 2025-11-24 15:00:08,162 | INFO     | errors: (none)
[2025-11-24 16:08:48] 2025-11-24 15:00:08,162 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 16:08:48] 2025-11-24 15:00:08,162 | INFO     | pilot state: finished 
[2025-11-24 16:08:48] 2025-11-24 15:00:08,162 | INFO     | transexitcode: 0
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | exeerrorcode: 0
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | exeerrordiag: 
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | exitcode: 0
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | exitmsg: OK
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | cpuconsumptiontime: 240731 s
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | nevents: 1000
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | neventsw: 0
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | pid: 1320387
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | pgrp: 1320387
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | corecount: 4
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | event service: False
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | sizes: {0: 2298596, 1: 2298795, 5: 2299057, 12: 2299113, 60859: 2351739, 60860: 2351738, 60863: 2361729, 60865: 2361785, 60871: 2362031}
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | --------------------------------------------------
[2025-11-24 16:08:48] 2025-11-24 15:00:08,163 | INFO     | 
[2025-11-24 16:08:48] 2025-11-24 15:00:08,164 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-11-24 16:08:48] 2025-11-24 15:00:08,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,183 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 16:08:48] 2025-11-24 15:00:08,185 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,185 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 16:08:48] 2025-11-24 15:00:08,185 | INFO     | job 6893876483 has completed (purged errors)
[2025-11-24 16:08:48] 2025-11-24 15:00:08,185 | INFO     | overall cleanup function is called
[2025-11-24 16:08:48] 2025-11-24 15:00:09,198 | INFO     | --- collectZombieJob: --- 10, [1320387]
[2025-11-24 16:08:48] 2025-11-24 15:00:09,198 | INFO     | zombie collector waiting for pid 1320387
[2025-11-24 16:08:48] 2025-11-24 15:00:09,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 16:08:48] 2025-11-24 15:00:09,199 | INFO     | collected zombie processes
[2025-11-24 16:08:48] 2025-11-24 15:00:09,199 | INFO     | will attempt to kill all subprocesses of pid=1320387
[2025-11-24 16:08:48] 2025-11-24 15:00:09,576 | INFO     | process IDs to be killed: [1320387] (in reverse order)
[2025-11-24 16:08:48] 2025-11-24 15:00:09,683 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 16:08:48] 2025-11-24 15:00:09,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 16:08:48] 2025-11-24 15:00:09,696 | INFO     | did not find any defunct processes belonging to 1320387
[2025-11-24 16:08:48] 2025-11-24 15:00:09,708 | INFO     | did not find any defunct processes belonging to 1320387
[2025-11-24 16:08:48] 2025-11-24 15:00:09,710 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 16:08:48] 2025-11-24 15:00:09,710 | INFO     | ready for new job
[2025-11-24 16:08:48] 2025-11-24 15:00:09,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 16:08:48] 2025-11-24 15:00:09,715 | INFO     | ***************************************
[2025-11-24 16:08:48] 2025-11-24 15:00:09,716 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 16:08:48] 2025-11-24 15:00:09,716 | INFO     | ***************************************
[2025-11-24 16:08:48] 2025-11-24 15:00:09,716 | INFO     | 
[2025-11-24 16:08:48] 2025-11-24 15:00:09,719 | INFO     | architecture information:
[2025-11-24 16:08:48] 2025-11-24 15:00:09,720 | INFO     | executing command: cat /etc/os-release
[2025-11-24 16:08:48] 2025-11-24 15:00:09,735 | INFO     | cat /etc/os-release:
[2025-11-24 16:08:48] NAME="CentOS Linux"
[2025-11-24 16:08:48] VERSION="7 (Core)"
[2025-11-24 16:08:48] ID="centos"
[2025-11-24 16:08:48] ID_LIKE="rhel fedora"
[2025-11-24 16:08:48] VERSION_ID="7"
[2025-11-24 16:08:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 16:08:48] ANSI_COLOR="0;31"
[2025-11-24 16:08:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 16:08:48] HOME_URL="https://www.centos.org/"
[2025-11-24 16:08:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 16:08:48] 
[2025-11-24 16:08:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 16:08:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 16:08:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 16:08:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 16:08:48] 
[2025-11-24 16:08:48] 2025-11-24 15:00:09,735 | INFO     | ***************************************
[2025-11-24 16:08:48] 2025-11-24 15:00:10,238 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-11-24 16:08:48] 2025-11-24 15:00:10,254 | INFO     | sufficient remaining disk space (670549671936 B)
[2025-11-24 16:08:48] 2025-11-24 15:00:10,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 16:08:48] 2025-11-24 15:00:10,255 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 16:08:48] 2025-11-24 15:00:10,255 | INFO     | update_server=False
[2025-11-24 16:08:48] 2025-11-24 15:00:10,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 16:08:48] 2025-11-24 15:00:10,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:08:48] 2025-11-24 15:00:10,256 | INFO     | aborting loop
[2025-11-24 16:08:48] 2025-11-24 15:00:10,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 16:08:48] 2025-11-24 15:00:10,763 | INFO     | all job control threads have been joined
[2025-11-24 16:08:48] 2025-11-24 15:00:10,833 | INFO     | all data control threads have been joined
[2025-11-24 16:08:48] 2025-11-24 15:00:11,261 | INFO     | [job] job monitor thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:11,262 | INFO     | [job] retrieve thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:11,485 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:11,677 | INFO     | all payload control threads have been joined
[2025-11-24 16:08:48] 2025-11-24 15:00:11,769 | INFO     | [job] control thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:11,838 | INFO     | [data] control thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:11,868 | INFO     | [payload] validate_post thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:11,983 | INFO     | [data] copytool_in thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:12,055 | INFO     | [job] validate thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:12,300 | INFO     | [payload] failed_post thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:12,370 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:12,576 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:12,577 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:12,682 | INFO     | [payload] control thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:12,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 16:08:48] 2025-11-24 15:00:12,768 | INFO     | [data] copytool_out thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:13,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:08:48] 2025-11-24 15:00:14,177 | INFO     | [job] queue monitor thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:16,736 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 16:08:48] 2025-11-24 15:00:40,031 | INFO     | PID=1306037 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 16:08:48] 2025-11-24 15:00:40,031 | INFO     | .. there are 5 such processes running
[2025-11-24 16:08:48] 2025-11-24 15:00:40,032 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 16:08:48] 2025-11-24 15:00:40,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 16:08:48] 2025-11-24 15:00:40,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 16:08:48] 2025-11-24 15:01:00,180 | INFO     | [monitor] cgroup control has ended
[2025-11-24 16:08:48] 2025-11-24 15:01:00,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22779135690560)>', '<ExcThread(monitor, started 22778558277376)>']
[2025-11-24 16:08:48] 2025-11-24 15:01:01,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 16:08:48] 2025-11-24 15:01:01,122 | INFO     | [monitor] control thread has ended
[2025-11-24 16:08:48] 2025-11-24 15:01:05,273 | INFO     | all workflow threads have been joined
[2025-11-24 16:08:48] 2025-11-24 15:01:05,273 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 16:08:48] 2025-11-24 15:01:05,273 | INFO     | traces error code: 0
[2025-11-24 16:08:48] 2025-11-24 15:01:05,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 16:08:48] 2025-11-24 15:01:05,468 [wrapper] ==== pilot stdout END ====
[2025-11-24 16:08:48] 2025-11-24 15:01:05,471 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 16:08:48] 2025-11-24 15:01:05,474 [wrapper] pilotpid: 1306037
[2025-11-24 16:08:48] 2025-11-24 15:01:05,477 [wrapper] Pilot exit status: 0
[2025-11-24 16:08:48] 2025-11-24 15:01:05,487 [wrapper] pandaids: 6893876483
[2025-11-24 16:08:48] 2025-11-24 15:01:05,560 [wrapper] cleanup supervisor_pilot 2205643 1306038
[2025-11-24 16:08:48] 2025-11-24 15:01:05,564 [wrapper] Test setup, not cleaning
[2025-11-24 16:08:48] 2025-11-24 15:01:05,566 [wrapper] apfmon messages muted
[2025-11-24 16:08:48] 2025-11-24 15:01:05,569 [wrapper] ==== wrapper stdout END ====
[2025-11-24 16:08:48] 2025-11-24 15:01:05,571 [wrapper] ==== wrapper stderr END ====
[2025-11-24 16:08:48]  *** Error codes and diagnostics ***
[2025-11-24 16:08:48]     "exeErrorCode": 0,
[2025-11-24 16:08:48]     "exeErrorDiag": "",
[2025-11-24 16:08:48]     "pilotErrorCode": 0,
[2025-11-24 16:08:48]     "pilotErrorDiag": "",
[2025-11-24 16:08:48]  *** Listing of results directory ***
[2025-11-24 16:08:48] total 1332904
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc    576529 Nov 20 18:01 pilot3.tar.gz
[2025-11-24 16:08:48] -rwx------ 1 boinc boinc     36292 Nov 20 18:12 runpilot2-wrapper.sh
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc      5112 Nov 20 18:12 queuedata.json
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc       100 Nov 23 23:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 16:08:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 23:05 run_atlas
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc       105 Nov 23 23:05 job.xml
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc      6632 Nov 23 23:05 init_data.xml
[2025-11-24 16:08:48] -rw-r--r-- 2 boinc boinc 410250176 Nov 23 23:05 EVNT.47493127._000756.pool.root.1
[2025-11-24 16:08:48] -rw-r--r-- 2 boinc boinc     15847 Nov 23 23:05 start_atlas.sh
[2025-11-24 16:08:48] drwxrwx--x 2 boinc boinc      4096 Nov 23 23:05 shared
[2025-11-24 16:08:48] -rw-r--r-- 2 boinc boinc    590092 Nov 23 23:05 input.tar.gz
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc         0 Nov 23 23:05 boinc_lockfile
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc      2785 Nov 23 23:05 pandaJob.out
[2025-11-24 16:08:48] -rw------- 1 boinc boinc    989786 Nov 23 23:05 agis_schedconf.cvmfs.json
[2025-11-24 16:08:48] drwx------ 5 boinc boinc      4096 Nov 23 23:05 pilot3
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc       531 Nov 24 15:54 boinc_task_state.xml
[2025-11-24 16:08:48] -rw------- 1 boinc boinc 930165015 Nov 24 15:59 HITS.47523449._007559.pool.root.1
[2025-11-24 16:08:48] -rw------- 1 boinc boinc      1055 Nov 24 15:59 memory_monitor_summary.json
[2025-11-24 16:08:48] -rw------- 1 boinc boinc   1516227 Nov 24 15:59 agis_ddmendpoints.agis.ALL.json
[2025-11-24 16:08:48] -rw------- 1 boinc boinc   1744713 Nov 24 15:59 log.47523449._007559.job.log.tgz.1
[2025-11-24 16:08:48] -rw------- 1 boinc boinc      8659 Nov 24 16:00 heartbeat.json
[2025-11-24 16:08:48] -rw------- 1 boinc boinc        95 Nov 24 16:00 pilot_heartbeat.json
[2025-11-24 16:08:48] -rw------- 1 boinc boinc      4833 Nov 24 16:01 pilotlog.txt
[2025-11-24 16:08:48] -rw------- 1 boinc boinc   8538976 Nov 24 16:01 log.47523449._007559.job.log.1
[2025-11-24 16:08:48] -rw------- 1 boinc boinc       353 Nov 24 16:01 output.list
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc       620 Nov 24 16:01 runtime_log
[2025-11-24 16:08:48] -rw------- 1 boinc boinc  10301440 Nov 24 16:01 result.tar.gz
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc      9206 Nov 24 16:01 runtime_log.err
[2025-11-24 16:08:48] -rw------- 1 boinc boinc       674 Nov 24 16:01 jODNDmrNNg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVuGKDmGNsf2m.diag
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc        28 Nov 24 16:08 wrapper_checkpoint.txt
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc      8192 Nov 24 16:08 boinc_mmap_file
[2025-11-24 16:08:48] -rw-r--r-- 1 boinc boinc     21221 Nov 24 16:08 stderr.txt
[2025-11-24 16:08:48] HITS file was successfully produced:
[2025-11-24 16:08:48] -rw------- 1 boinc boinc 930165015 Nov 24 15:59 shared/HITS.pool.root.1
[2025-11-24 16:08:48]  *** Contents of shared directory: ***
[2025-11-24 16:08:48] total 1319668
[2025-11-24 16:08:48] -rw-r--r-- 2 boinc boinc 410250176 Nov 23 23:05 ATLAS.root_0
[2025-11-24 16:08:48] -rw-r--r-- 2 boinc boinc     15847 Nov 23 23:05 start_atlas.sh
[2025-11-24 16:08:48] -rw-r--r-- 2 boinc boinc    590092 Nov 23 23:05 input.tar.gz
[2025-11-24 16:08:48] -rw------- 1 boinc boinc 930165015 Nov 24 15:59 HITS.pool.root.1
[2025-11-24 16:08:48] -rw------- 1 boinc boinc  10301440 Nov 24 16:01 result.tar.gz
16:08:50 (1301486): run_atlas exited; CPU time 243043.336766
16:08:50 (1301486): called boinc_finish(0)

</stderr_txt>
]]>

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