Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:03:55 (2655454): wrapper (7.7.26015): starting
23:03:55 (2655454): wrapper: running run_atlas (--nthreads 11)
[2025-11-20 23:03:56] Arguments: --nthreads 11
[2025-11-20 23:03:56] Threads: 11
[2025-11-20 23:03:56] Checking for CVMFS
[2025-11-20 23:03:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:03:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:03:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:03:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:03:56] 2.13.3.0 290515 25103 353760 153106 1 335 37646563 40960001 11913 16776704 0 120667104 99.744 79323810 38516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-20 23:03:56] CVMFS is ok
[2025-11-20 23:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 23:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 23:03:56] Further information can be found at the LHC@home message board.
[2025-11-20 23:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:03:56] Checking for apptainer binary...
[2025-11-20 23:03:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:03:56] Running /usr/bin/apptainer --version
[2025-11-20 23:03:56] apptainer version 1.4.4-1.el9
[2025-11-20 23:03:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:03:56] c6-5-37-4.aglt2.org
[2025-11-20 23:03:56] apptainer works
[2025-11-20 23:03:56] Set ATHENA_PROC_NUMBER=11
[2025-11-20 23:03:56] Set ATHENA_CORE_NUMBER=11
[2025-11-20 23:03:56] Starting ATLAS job with PandaID=6893875888
[2025-11-20 23:03:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 10:17:24]  *** The last 200 lines of the pilot log: ***
[2025-11-21 10:17:24] 2025-11-21 15:16:33,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 10:17:24] 2025-11-21 15:16:33,272 | INFO     | time since job start (40344s) is within the limit (172800.0s)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,349 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 10:17:24] 2025-11-21 15:16:34,357 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3128.5793214285704
[2025-11-21 10:17:24] 2025-11-21 15:16:34,367 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893875888/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,367 | INFO     | extracted standard info from prmon json
[2025-11-21 10:17:24] 2025-11-21 15:16:34,368 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 10:17:24] 2025-11-21 15:16:34,368 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 10:17:24] 2025-11-21 15:16:34,378 | INFO     | fitting pss+swap vs Time
[2025-11-21 10:17:24] 2025-11-21 15:16:34,379 | INFO     | sum of square deviations: 89547078814.09691
[2025-11-21 10:17:24] 2025-11-21 15:16:34,387 | INFO     | sum of deviations: 1263072185794.0176
[2025-11-21 10:17:24] 2025-11-21 15:16:34,387 | INFO     | mean x: 1763718010.2829046
[2025-11-21 10:17:24] 2025-11-21 15:16:34,388 | INFO     | mean y: 3318986.010590015
[2025-11-21 10:17:24] 2025-11-21 15:16:34,388 | INFO     | intersect: -24874133097.011562
[2025-11-21 10:17:24] 2025-11-21 15:16:34,388 | INFO     | chi2: 8.709838974007223
[2025-11-21 10:17:24] 2025-11-21 15:16:34,389 | INFO     | sum of square deviations: 87530443815.80493
[2025-11-21 10:17:24] 2025-11-21 15:16:34,397 | INFO     | sum of deviations: 1546435731718.7073
[2025-11-21 10:17:24] 2025-11-21 15:16:34,397 | INFO     | mean x: 1763717857.792683
[2025-11-21 10:17:24] 2025-11-21 15:16:34,398 | INFO     | mean y: 3340415.31402439
[2025-11-21 10:17:24] 2025-11-21 15:16:34,398 | INFO     | intersect: -31156975893.609932
[2025-11-21 10:17:24] 2025-11-21 15:16:34,398 | INFO     | chi2: 4.922919465840454
[2025-11-21 10:17:24] 2025-11-21 15:16:34,399 | INFO     | current chi2=4.922919465840454 (change=43.47863972535055 %)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,399 | INFO     | sum of square deviations: 85544281246.98935
[2025-11-21 10:17:24] 2025-11-21 15:16:34,407 | INFO     | sum of deviations: 1616023926163.055
[2025-11-21 10:17:24] 2025-11-21 15:16:34,408 | INFO     | mean x: 1763717705.3010752
[2025-11-21 10:17:24] 2025-11-21 15:16:34,408 | INFO     | mean y: 3345741.9231950846
[2025-11-21 10:17:24] 2025-11-21 15:16:34,408 | INFO     | intersect: -33315187878.513855
[2025-11-21 10:17:24] 2025-11-21 15:16:34,409 | INFO     | chi2: 4.444485456936952
[2025-11-21 10:17:24] 2025-11-21 15:16:34,409 | INFO     | current chi2=4.444485456936952 (change=9.718501637560761 %)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,409 | INFO     | right removable region: 650
[2025-11-21 10:17:24] 2025-11-21 15:16:34,410 | INFO     | sum of square deviations: 87529926535.8049
[2025-11-21 10:17:24] 2025-11-21 15:16:34,418 | INFO     | sum of deviations: 968434164209.4775
[2025-11-21 10:17:24] 2025-11-21 15:16:34,418 | INFO     | mean x: 1763718162.792683
[2025-11-21 10:17:24] 2025-11-21 15:16:34,418 | INFO     | mean y: 3341254.599085366
[2025-11-21 10:17:24] 2025-11-21 15:16:34,418 | INFO     | intersect: -19510498097.094143
[2025-11-21 10:17:24] 2025-11-21 15:16:34,419 | INFO     | chi2: 4.878173085222851
[2025-11-21 10:17:24] 2025-11-21 15:16:34,419 | INFO     | current chi2=4.878173085222851 (change=43.992384936383026 %)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,420 | INFO     | sum of square deviations: 85543725640.85727
[2025-11-21 10:17:24] 2025-11-21 15:16:34,428 | INFO     | sum of deviations: 869604736202.429
[2025-11-21 10:17:24] 2025-11-21 15:16:34,428 | INFO     | mean x: 1763718315.2857144
[2025-11-21 10:17:24] 2025-11-21 15:16:34,428 | INFO     | mean y: 3348828.4116743472
[2025-11-21 10:17:24] 2025-11-21 15:16:34,428 | INFO     | intersect: -17925935742.83319
[2025-11-21 10:17:24] 2025-11-21 15:16:34,429 | INFO     | chi2: 4.450375975625173
[2025-11-21 10:17:24] 2025-11-21 15:16:34,429 | INFO     | current chi2=4.450375975625173 (change=8.769617275237279 %)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,429 | INFO     | left removable region: 20
[2025-11-21 10:17:24] 2025-11-21 15:16:34,430 | INFO     | sum of square deviations: 77532161478.64282
[2025-11-21 10:17:24] 2025-11-21 15:16:34,437 | INFO     | sum of deviations: 1116386727045.4766
[2025-11-21 10:17:24] 2025-11-21 15:16:34,438 | INFO     | mean x: 1763718284.6904762
[2025-11-21 10:17:24] 2025-11-21 15:16:34,438 | INFO     | mean y: 3384193.012698413
[2025-11-21 10:17:24] 2025-11-21 15:16:34,438 | INFO     | intersect: -25392421182.77636
[2025-11-21 10:17:24] 2025-11-21 15:16:34,439 | INFO     | chi2: 0.03365565745164433
[2025-11-21 10:17:24] 2025-11-21 15:16:34,439 | INFO     | current memory leak: 14.40 B/s (using 630 data points, chi2=0.03)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,439 | INFO     | could have reported an average CPU frequency of 2992 MHz (26 samples)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,440 | INFO     | ..............................
[2025-11-21 10:17:24] 2025-11-21 15:16:34,440 | INFO     | . Timing measurements:
[2025-11-21 10:17:24] 2025-11-21 15:16:34,440 | INFO     | . get job = 0 s
[2025-11-21 10:17:24] 2025-11-21 15:16:34,440 | INFO     | . initial setup = 2 s
[2025-11-21 10:17:24] 2025-11-21 15:16:34,440 | INFO     | . payload setup = 7 s
[2025-11-21 10:17:24] 2025-11-21 15:16:34,440 | INFO     | . stage-in = 0 s
[2025-11-21 10:17:24] 2025-11-21 15:16:34,440 | INFO     | . payload execution = 40301 s
[2025-11-21 10:17:24] 2025-11-21 15:16:34,440 | INFO     | . stage-out = 4 s
[2025-11-21 10:17:24] 2025-11-21 15:16:34,440 | INFO     | . log creation = 0 s
[2025-11-21 10:17:24] 2025-11-21 15:16:34,440 | INFO     | ..............................
[2025-11-21 10:17:24] 2025-11-21 15:16:34,525 | INFO     | 
[2025-11-21 10:17:24] 2025-11-21 15:16:34,525 | INFO     | job summary report
[2025-11-21 10:17:24] 2025-11-21 15:16:34,525 | INFO     | --------------------------------------------------
[2025-11-21 10:17:24] 2025-11-21 15:16:34,525 | INFO     | PanDA job id: 6893875888
[2025-11-21 10:17:24] 2025-11-21 15:16:34,525 | INFO     | task id: 47523449
[2025-11-21 10:17:24] 2025-11-21 15:16:34,525 | INFO     | errors: (none)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 10:17:24] 2025-11-21 15:16:34,525 | INFO     | pilot state: finished 
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | transexitcode: 0
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | exeerrorcode: 0
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | exeerrordiag: 
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | exitcode: 0
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | exitmsg: OK
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | cpuconsumptiontime: 230540 s
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | nevents: 1000
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | neventsw: 0
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | pid: 2666982
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | pgrp: 2666982
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | corecount: 11
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | event service: False
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | sizes: {0: 2298534, 1: 2298733, 6: 2298995, 11: 2299023, 40312: 2342920, 40313: 2342919, 40318: 2352153, 40329: 2352343}
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | --------------------------------------------------
[2025-11-21 10:17:24] 2025-11-21 15:16:34,526 | INFO     | 
[2025-11-21 10:17:24] 2025-11-21 15:16:34,527 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 10:17:24] 2025-11-21 15:16:34,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,546 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,547 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 10:17:24] 2025-11-21 15:16:34,548 | INFO     | job 6893875888 has completed (purged errors)
[2025-11-21 10:17:24] 2025-11-21 15:16:34,548 | INFO     | overall cleanup function is called
[2025-11-21 10:17:24] 2025-11-21 15:16:35,578 | INFO     | --- collectZombieJob: --- 10, [2666982]
[2025-11-21 10:17:24] 2025-11-21 15:16:35,579 | INFO     | zombie collector waiting for pid 2666982
[2025-11-21 10:17:24] 2025-11-21 15:16:35,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 10:17:24] 2025-11-21 15:16:35,579 | INFO     | collected zombie processes
[2025-11-21 10:17:24] 2025-11-21 15:16:35,579 | INFO     | will attempt to kill all subprocesses of pid=2666982
[2025-11-21 10:17:24] 2025-11-21 15:16:36,409 | INFO     | process IDs to be killed: [2666982] (in reverse order)
[2025-11-21 10:17:24] 2025-11-21 15:16:36,541 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 10:17:24] 2025-11-21 15:16:36,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 10:17:24] 2025-11-21 15:16:36,559 | INFO     | did not find any defunct processes belonging to 2666982
[2025-11-21 10:17:24] 2025-11-21 15:16:36,588 | INFO     | did not find any defunct processes belonging to 2666982
[2025-11-21 10:17:24] 2025-11-21 15:16:36,593 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 10:17:24] 2025-11-21 15:16:36,593 | INFO     | ready for new job
[2025-11-21 10:17:24] 2025-11-21 15:16:36,593 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 10:17:24] 2025-11-21 15:16:36,605 | INFO     | ***************************************
[2025-11-21 10:17:24] 2025-11-21 15:16:36,605 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 10:17:24] 2025-11-21 15:16:36,605 | INFO     | ***************************************
[2025-11-21 10:17:24] 2025-11-21 15:16:36,605 | INFO     | 
[2025-11-21 10:17:24] 2025-11-21 15:16:36,616 | INFO     | architecture information:
[2025-11-21 10:17:24] 2025-11-21 15:16:36,620 | INFO     | executing command: cat /etc/os-release
[2025-11-21 10:17:24] 2025-11-21 15:16:36,692 | INFO     | cat /etc/os-release:
[2025-11-21 10:17:24] NAME="CentOS Linux"
[2025-11-21 10:17:24] VERSION="7 (Core)"
[2025-11-21 10:17:24] ID="centos"
[2025-11-21 10:17:24] ID_LIKE="rhel fedora"
[2025-11-21 10:17:24] VERSION_ID="7"
[2025-11-21 10:17:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 10:17:24] ANSI_COLOR="0;31"
[2025-11-21 10:17:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 10:17:24] HOME_URL="https://www.centos.org/"
[2025-11-21 10:17:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 10:17:24] 
[2025-11-21 10:17:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 10:17:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 10:17:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 10:17:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 10:17:24] 
[2025-11-21 10:17:24] 2025-11-21 15:16:36,693 | INFO     | ***************************************
[2025-11-21 10:17:24] 2025-11-21 15:16:37,196 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 10:17:24] 2025-11-21 15:16:37,239 | INFO     | sufficient remaining disk space (67001909248 B)
[2025-11-21 10:17:24] 2025-11-21 15:16:37,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 10:17:24] 2025-11-21 15:16:37,239 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 10:17:24] 2025-11-21 15:16:37,239 | INFO     | update_server=False
[2025-11-21 10:17:24] 2025-11-21 15:16:37,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 10:17:24] 2025-11-21 15:16:37,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 10:17:24] 2025-11-21 15:16:37,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:17:24] 2025-11-21 15:16:37,240 | INFO     | aborting loop
[2025-11-21 10:17:24] 2025-11-21 15:16:37,402 | INFO     | all payload control threads have been joined
[2025-11-21 10:17:24] 2025-11-21 15:16:37,447 | INFO     | all data control threads have been joined
[2025-11-21 10:17:24] 2025-11-21 15:16:38,148 | INFO     | all job control threads have been joined
[2025-11-21 10:17:24] 2025-11-21 15:16:38,245 | INFO     | [job] retrieve thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:38,246 | INFO     | [job] job monitor thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:38,294 | INFO     | [data] copytool_in thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:38,408 | INFO     | [payload] control thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:38,429 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:38,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 10:17:24] 2025-11-21 15:16:38,453 | INFO     | [data] control thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:38,667 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:38,677 | INFO     | [payload] validate_post thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:38,681 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:39,155 | INFO     | [job] control thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:39,246 | INFO     | [data] copytool_out thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:39,412 | INFO     | [job] validate thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:39,537 | INFO     | [payload] failed_post thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:39,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:17:24] 2025-11-21 15:16:40,577 | INFO     | [job] queue monitor thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:42,442 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:16:48,107 | INFO     | job.realtimelogging is not enabled
[2025-11-21 10:17:24] 2025-11-21 15:16:49,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 10:17:24] 2025-11-21 15:17:06,902 | INFO     | PID=2659222 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 10:17:24] 2025-11-21 15:17:06,902 | INFO     | .. there are 20 such processes running
[2025-11-21 10:17:24] 2025-11-21 15:17:06,908 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 10:17:24] 2025-11-21 15:17:06,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 10:17:24] 2025-11-21 15:17:06,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 10:17:24] 2025-11-21 15:17:18,030 | INFO     | [monitor] cgroup control has ended
[2025-11-21 10:17:24] 2025-11-21 15:17:18,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650564753216)>', '<ExcThread(monitor, started 140650196473600)>']
[2025-11-21 10:17:24] 2025-11-21 15:17:18,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 10:17:24] 2025-11-21 15:17:18,980 | INFO     | [monitor] control thread has ended
[2025-11-21 10:17:24] 2025-11-21 15:17:23,475 | INFO     | all workflow threads have been joined
[2025-11-21 10:17:24] 2025-11-21 15:17:23,475 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 10:17:24] 2025-11-21 15:17:23,476 | INFO     | traces error code: 0
[2025-11-21 10:17:24] 2025-11-21 15:17:23,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 10:17:24] 2025-11-21 15:17:23,780 [wrapper] ==== pilot stdout END ====
[2025-11-21 10:17:24] 2025-11-21 15:17:23,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 10:17:24] 2025-11-21 15:17:23,817 [wrapper] pilotpid: 2659222
[2025-11-21 10:17:24] 2025-11-21 15:17:23,834 [wrapper] Pilot exit status: 0
[2025-11-21 10:17:24] 2025-11-21 15:17:23,912 [wrapper] pandaids: 6893875888
[2025-11-21 10:17:24] 2025-11-21 15:17:24,198 [wrapper] cleanup supervisor_pilot  296633 2659224
[2025-11-21 10:17:24] 2025-11-21 15:17:24,217 [wrapper] Test setup, not cleaning
[2025-11-21 10:17:24] 2025-11-21 15:17:24,231 [wrapper] apfmon messages muted
[2025-11-21 10:17:24] 2025-11-21 15:17:24,246 [wrapper] ==== wrapper stdout END ====
[2025-11-21 10:17:24] 2025-11-21 15:17:24,265 [wrapper] ==== wrapper stderr END ====
[2025-11-21 10:17:24]  *** Error codes and diagnostics ***
[2025-11-21 10:17:24]     "exeErrorCode": 0,
[2025-11-21 10:17:24]     "exeErrorDiag": "",
[2025-11-21 10:17:24]     "pilotErrorCode": 0,
[2025-11-21 10:17:24]     "pilotErrorDiag": "",
[2025-11-21 10:17:24]  *** Listing of results directory ***
[2025-11-21 10:17:24] total 1322792
[2025-11-21 10:17:24] -rwx------. 1 boincer umatlas     36292 Nov 20 11:47 runpilot2-wrapper.sh
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 11:47 queuedata.json
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 11:47 pilot3.tar.gz
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas       100 Nov 20 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 10:17:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 23:03 run_atlas
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas       105 Nov 20 23:03 job.xml
[2025-11-21 10:17:24] -rw-r--r--. 2 boincer umatlas 409853675 Nov 20 23:03 EVNT.47493127._000747.pool.root.1
[2025-11-21 10:17:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:03 start_atlas.sh
[2025-11-21 10:17:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 23:03 shared
[2025-11-21 10:17:24] -rw-r--r--. 2 boincer umatlas    590091 Nov 20 23:03 input.tar.gz
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas         0 Nov 20 23:03 boinc_lockfile
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas      2784 Nov 20 23:03 pandaJob.out
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas        57 Nov 20 23:03 setup.sh.local
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas    989817 Nov 20 23:04 agis_schedconf.cvmfs.json
[2025-11-21 10:17:24] drwx------. 5 boincer umatlas      4096 Nov 20 23:04 pilot3
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas       533 Nov 21 10:06 boinc_task_state.xml
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas      6843 Nov 21 10:13 init_data.xml
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas 925171975 Nov 21 10:15 HITS.47523449._007470.pool.root.1
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas      1050 Nov 21 10:16 memory_monitor_summary.json
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas   1526164 Nov 21 10:16 agis_ddmendpoints.agis.ALL.json
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas   2265451 Nov 21 10:16 log.47523449._007470.job.log.tgz.1
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas      8624 Nov 21 10:16 heartbeat.json
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas        95 Nov 21 10:17 pilot_heartbeat.json
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas        29 Nov 21 10:17 wrapper_checkpoint.txt
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 10:17 boinc_mmap_file
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas      4896 Nov 21 10:17 pilotlog.txt
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas   5528150 Nov 21 10:17 log.47523449._007470.job.log.1
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas       353 Nov 21 10:17 output.list
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas       620 Nov 21 10:17 runtime_log
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas   7813120 Nov 21 10:17 result.tar.gz
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas      9350 Nov 21 10:17 runtime_log.err
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas       661 Nov 21 10:17 41AMDmwzMg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuJIKDmEkxbMo.diag
[2025-11-21 10:17:24] -rw-r--r--. 1 boincer umatlas     21317 Nov 21 10:17 stderr.txt
[2025-11-21 10:17:24] HITS file was successfully produced:
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas 925171975 Nov 21 10:15 shared/HITS.pool.root.1
[2025-11-21 10:17:24]  *** Contents of shared directory: ***
[2025-11-21 10:17:24] total 1311972
[2025-11-21 10:17:24] -rw-r--r--. 2 boincer umatlas 409853675 Nov 20 23:03 ATLAS.root_0
[2025-11-21 10:17:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:03 start_atlas.sh
[2025-11-21 10:17:24] -rw-r--r--. 2 boincer umatlas    590091 Nov 20 23:03 input.tar.gz
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas 925171975 Nov 21 10:15 HITS.pool.root.1
[2025-11-21 10:17:24] -rw-------. 1 boincer umatlas   7813120 Nov 21 10:17 result.tar.gz
10:17:26 (2655454): run_atlas exited; CPU time 231069.139835
10:17:26 (2655454): called boinc_finish(0)

</stderr_txt>
]]>

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