Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
21:02:02 (85144): wrapper (7.7.26015): starting
21:02:02 (85144): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 21:02:02] Arguments: --nthreads 8
[2025-11-20 21:02:02] Threads: 8
[2025-11-20 21:02:02] Checking for CVMFS
[2025-11-20 21:02:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 21:02:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 21:02:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 21:02:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 21:02:03] 2.13.3.0 4524 59 48308 153108 0 90 1180844 4096000 3768 130560 0 1582002 99.618 500174 876 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-20 21:02:03] CVMFS is ok
[2025-11-20 21:02:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 21:02:03] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-20 21:02:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-20 21:02:03] Further information can be found at the LHC@home message board.
[2025-11-20 21:02:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 21:02:03] Checking for apptainer binary...
[2025-11-20 21:02:03] apptainer is not installed, using version from CVMFS
[2025-11-20 21:02:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 21:02:03] 7950x-linux
[2025-11-20 21:02:03] apptainer works
[2025-11-20 21:02:03] Set ATHENA_PROC_NUMBER=8
[2025-11-20 21:02:03] Set ATHENA_CORE_NUMBER=8
[2025-11-20 21:02:03] Starting ATLAS job with PandaID=6893876476
[2025-11-20 21:02:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc501/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 10:23:43]  *** The last 200 lines of the pilot log: ***
[2025-11-21 10:23:43] 2025-11-21 18:22:56,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,156 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 10:23:43] 2025-11-21 18:22:57,159 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.853875
[2025-11-21 10:23:43] 2025-11-21 18:22:57,162 | INFO     | using path: /var/lib/multiboinc/boinc501/slots/1/PanDA_Pilot-6893876476/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,162 | INFO     | extracted standard info from prmon json
[2025-11-21 10:23:43] 2025-11-21 18:22:57,162 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 10:23:43] 2025-11-21 18:22:57,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 10:23:43] 2025-11-21 18:22:57,169 | INFO     | fitting pss+swap vs Time
[2025-11-21 10:23:43] 2025-11-21 18:22:57,169 | INFO     | sum of square deviations: 151147831178.0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,178 | INFO     | sum of deviations: 1010815640444.0001
[2025-11-21 10:23:43] 2025-11-21 18:22:57,179 | INFO     | mean x: 1763725336.0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,179 | INFO     | mean y: 2878726.2795425667
[2025-11-21 10:23:43] 2025-11-21 18:22:57,179 | INFO     | intersect: -11792203883.782024
[2025-11-21 10:23:43] 2025-11-21 18:22:57,179 | INFO     | chi2: 4.752105213626984
[2025-11-21 10:23:43] 2025-11-21 18:22:57,180 | INFO     | sum of square deviations: 148285256575.5
[2025-11-21 10:23:43] 2025-11-21 18:22:57,187 | INFO     | sum of deviations: 1208898790804.0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,188 | INFO     | mean x: 1763725183.5
[2025-11-21 10:23:43] 2025-11-21 18:22:57,188 | INFO     | mean y: 2889265.265984655
[2025-11-21 10:23:43] 2025-11-21 18:22:57,188 | INFO     | intersect: -14375918789.451935
[2025-11-21 10:23:43] 2025-11-21 18:22:57,188 | INFO     | chi2: 2.578911735135365
[2025-11-21 10:23:43] 2025-11-21 18:22:57,188 | INFO     | current chi2=2.578911735135365 (change=45.73117346518 %)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,191 | INFO     | sum of square deviations: 145459054748.0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,198 | INFO     | sum of deviations: 1201871123848.9998
[2025-11-21 10:23:43] 2025-11-21 18:22:57,198 | INFO     | mean x: 1763725031.0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,198 | INFO     | mean y: 2888883.9703989704
[2025-11-21 10:23:43] 2025-11-21 18:22:57,198 | INFO     | intersect: -14570079356.75528
[2025-11-21 10:23:43] 2025-11-21 18:22:57,198 | INFO     | chi2: 2.5623547966300806
[2025-11-21 10:23:43] 2025-11-21 18:22:57,198 | INFO     | current chi2=2.5623547966300806 (change=0.6420126086407355 %)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,198 | INFO     | right removable region: 776
[2025-11-21 10:23:43] 2025-11-21 18:22:57,202 | INFO     | sum of square deviations: 148285256575.5
[2025-11-21 10:23:43] 2025-11-21 18:22:57,208 | INFO     | sum of deviations: 787095226626.4995
[2025-11-21 10:23:43] 2025-11-21 18:22:57,209 | INFO     | mean x: 1763725488.5
[2025-11-21 10:23:43] 2025-11-21 18:22:57,209 | INFO     | mean y: 2890628.269820972
[2025-11-21 10:23:43] 2025-11-21 18:22:57,209 | INFO     | intersect: -9358929589.986492
[2025-11-21 10:23:43] 2025-11-21 18:22:57,209 | INFO     | chi2: 2.3990211509710555
[2025-11-21 10:23:43] 2025-11-21 18:22:57,209 | INFO     | current chi2=2.3990211509710555 (change=49.51666591699823 %)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,210 | INFO     | sum of square deviations: 145459054748.0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,216 | INFO     | sum of deviations: 736908984882.0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,216 | INFO     | mean x: 1763725641.0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,216 | INFO     | mean y: 2893335.2187902187
[2025-11-21 10:23:43] 2025-11-21 18:22:57,216 | INFO     | intersect: -8932303404.312717
[2025-11-21 10:23:43] 2025-11-21 18:22:57,217 | INFO     | chi2: 2.345181585664721
[2025-11-21 10:23:43] 2025-11-21 18:22:57,217 | INFO     | current chi2=2.345181585664721 (change=2.244230538965523 %)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,217 | INFO     | left removable region: 20
[2025-11-21 10:23:43] 2025-11-21 18:22:57,217 | INFO     | sum of square deviations: 133980949305.0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,224 | INFO     | sum of deviations: 850316611288.5001
[2025-11-21 10:23:43] 2025-11-21 18:22:57,224 | INFO     | mean x: 1763725610.5
[2025-11-21 10:23:43] 2025-11-21 18:22:57,224 | INFO     | mean y: 2907997.0674603176
[2025-11-21 10:23:43] 2025-11-21 18:22:57,224 | INFO     | intersect: -11190662373.516062
[2025-11-21 10:23:43] 2025-11-21 18:22:57,224 | INFO     | chi2: 0.09826892670042912
[2025-11-21 10:23:43] 2025-11-21 18:22:57,224 | INFO     | current memory leak: 6.35 B/s (using 756 data points, chi2=0.10)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | could have reported an average CPU frequency of 3999 MHz (30 samples)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | ..............................
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | . Timing measurements:
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | . get job = 0 s
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | . initial setup = 3 s
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | . payload setup = 5 s
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | . stage-in = 0 s
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | . payload execution = 48004 s
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | . stage-out = 3 s
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | . log creation = 0 s
[2025-11-21 10:23:43] 2025-11-21 18:22:57,225 | INFO     | ..............................
[2025-11-21 10:23:43] 2025-11-21 18:22:57,292 | INFO     | 
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | job summary report
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | --------------------------------------------------
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | PanDA job id: 6893876476
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | task id: 47523449
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | errors: (none)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | pilot state: finished 
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | transexitcode: 0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | exeerrorcode: 0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | exeerrordiag: 
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | exitcode: 0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | exitmsg: OK
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | cpuconsumptiontime: 132819 s
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | nevents: 1000
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | neventsw: 0
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | pid: 96006
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | pgrp: 96006
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | corecount: 8
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | event service: False
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | sizes: {0: 2298548, 1: 2298747, 5: 2299009, 11: 2299065, 48014: 2345825, 48018: 2354847, 48019: 2355031, 48024: 2355277}
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | --------------------------------------------------
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | 
[2025-11-21 10:23:43] 2025-11-21 18:22:57,293 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc501/slots/1
[2025-11-21 10:23:43] 2025-11-21 18:22:57,317 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,317 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,317 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,317 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | job 6893876476 has completed (purged errors)
[2025-11-21 10:23:43] 2025-11-21 18:22:57,318 | INFO     | overall cleanup function is called
[2025-11-21 10:23:43] 2025-11-21 18:22:58,336 | INFO     | --- collectZombieJob: --- 10, [96006]
[2025-11-21 10:23:43] 2025-11-21 18:22:58,337 | INFO     | zombie collector waiting for pid 96006
[2025-11-21 10:23:43] 2025-11-21 18:22:58,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 10:23:43] 2025-11-21 18:22:58,337 | INFO     | collected zombie processes
[2025-11-21 10:23:43] 2025-11-21 18:22:58,337 | INFO     | will attempt to kill all subprocesses of pid=96006
[2025-11-21 10:23:43] 2025-11-21 18:22:58,646 | INFO     | process IDs to be killed: [96006] (in reverse order)
[2025-11-21 10:23:43] 2025-11-21 18:22:58,776 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 10:23:43] 2025-11-21 18:22:58,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 10:23:43] 2025-11-21 18:22:58,780 | INFO     | did not find any defunct processes belonging to 96006
[2025-11-21 10:23:43] 2025-11-21 18:22:58,784 | INFO     | did not find any defunct processes belonging to 96006
[2025-11-21 10:23:43] 2025-11-21 18:22:58,785 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 10:23:43] 2025-11-21 18:22:58,785 | INFO     | ready for new job
[2025-11-21 10:23:43] 2025-11-21 18:22:58,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 10:23:43] 2025-11-21 18:22:58,788 | INFO     | ***************************************
[2025-11-21 10:23:43] 2025-11-21 18:22:58,791 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 10:23:43] 2025-11-21 18:22:58,791 | INFO     | ***************************************
[2025-11-21 10:23:43] 2025-11-21 18:22:58,791 | INFO     | 
[2025-11-21 10:23:43] 2025-11-21 18:22:58,793 | INFO     | architecture information:
[2025-11-21 10:23:43] 2025-11-21 18:22:58,797 | INFO     | executing command: cat /etc/os-release
[2025-11-21 10:23:43] 2025-11-21 18:22:58,815 | INFO     | cat /etc/os-release:
[2025-11-21 10:23:43] NAME="CentOS Linux"
[2025-11-21 10:23:43] VERSION="7 (Core)"
[2025-11-21 10:23:43] ID="centos"
[2025-11-21 10:23:43] ID_LIKE="rhel fedora"
[2025-11-21 10:23:43] VERSION_ID="7"
[2025-11-21 10:23:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 10:23:43] ANSI_COLOR="0;31"
[2025-11-21 10:23:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 10:23:43] HOME_URL="https://www.centos.org/"
[2025-11-21 10:23:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 10:23:43] 
[2025-11-21 10:23:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 10:23:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 10:23:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 10:23:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 10:23:43] 
[2025-11-21 10:23:43] 2025-11-21 18:22:58,816 | INFO     | ***************************************
[2025-11-21 10:23:43] 2025-11-21 18:22:59,318 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc501/slots/1
[2025-11-21 10:23:43] 2025-11-21 18:22:59,329 | INFO     | sufficient remaining disk space (197163745280 B)
[2025-11-21 10:23:43] 2025-11-21 18:22:59,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 10:23:43] 2025-11-21 18:22:59,329 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 10:23:43] 2025-11-21 18:22:59,329 | INFO     | update_server=False
[2025-11-21 10:23:43] 2025-11-21 18:22:59,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 10:23:43] 2025-11-21 18:22:59,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 10:23:43] 2025-11-21 18:22:59,414 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 10:23:43] 2025-11-21 18:22:59,415 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 10:23:43] 2025-11-21 18:22:59,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:23:43] 2025-11-21 18:22:59,415 | INFO     | will abort loop
[2025-11-21 10:23:43] 2025-11-21 18:22:59,709 | INFO     | all data control threads have been joined
[2025-11-21 10:23:43] 2025-11-21 18:23:00,260 | INFO     | all job control threads have been joined
[2025-11-21 10:23:43] 2025-11-21 18:23:00,337 | INFO     | [job] retrieve thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:00,423 | INFO     | [job] job monitor thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:00,614 | INFO     | [job] validate thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:00,634 | INFO     | [payload] validate_post thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:00,677 | INFO     | all payload control threads have been joined
[2025-11-21 10:23:43] 2025-11-21 18:23:00,714 | INFO     | [data] control thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:00,805 | INFO     | [data] copytool_in thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:00,898 | INFO     | [payload] failed_post thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:01,016 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:01,165 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:01,254 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:01,265 | INFO     | [job] control thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:01,334 | INFO     | [data] copytool_out thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:01,682 | INFO     | [payload] control thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:01,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:02,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:23:43] 2025-11-21 18:23:02,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 10:23:43] 2025-11-21 18:23:03,289 | INFO     | [job] queue monitor thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:06,576 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 10:23:43] 2025-11-21 18:23:29,331 | INFO     | PID=89333 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 10:23:43] 2025-11-21 18:23:29,331 | INFO     | .. there are 12 such processes running
[2025-11-21 10:23:43] 2025-11-21 18:23:29,331 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 10:23:43] 2025-11-21 18:23:29,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 10:23:43] 2025-11-21 18:23:29,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 10:23:43] 2025-11-21 18:23:37,613 | INFO     | [monitor] cgroup control has ended
[2025-11-21 10:23:43] 2025-11-21 18:23:37,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133783171671872)>', '<ExcThread(monitor, started 133782459905792)>']
[2025-11-21 10:23:43] 2025-11-21 18:23:38,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 10:23:43] 2025-11-21 18:23:38,376 | INFO     | [monitor] control thread has ended
[2025-11-21 10:23:43] 2025-11-21 18:23:42,923 | INFO     | all workflow threads have been joined
[2025-11-21 10:23:43] 2025-11-21 18:23:42,924 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 10:23:43] 2025-11-21 18:23:42,924 | INFO     | traces error code: 0
[2025-11-21 10:23:43] 2025-11-21 18:23:42,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 10:23:43] 2025-11-21 18:23:43,006 [wrapper] ==== pilot stdout END ====
[2025-11-21 10:23:43] 2025-11-21 18:23:43,007 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 10:23:43] 2025-11-21 18:23:43,009 [wrapper] pilotpid: 89333
[2025-11-21 10:23:43] 2025-11-21 18:23:43,010 [wrapper] Pilot exit status: 0
[2025-11-21 10:23:43] 2025-11-21 18:23:43,016 [wrapper] pandaids: 6893876476
[2025-11-21 10:23:43] 2025-11-21 18:23:43,071 [wrapper] cleanup supervisor_pilot 1040560 89334
[2025-11-21 10:23:43] 2025-11-21 18:23:43,073 [wrapper] Test setup, not cleaning
[2025-11-21 10:23:43] 2025-11-21 18:23:43,075 [wrapper] apfmon messages muted
[2025-11-21 10:23:43] 2025-11-21 18:23:43,076 [wrapper] ==== wrapper stdout END ====
[2025-11-21 10:23:43] 2025-11-21 18:23:43,078 [wrapper] ==== wrapper stderr END ====
[2025-11-21 10:23:43]  *** Error codes and diagnostics ***
[2025-11-21 10:23:43]     "exeErrorCode": 0,
[2025-11-21 10:23:43]     "exeErrorDiag": "",
[2025-11-21 10:23:43]     "pilotErrorCode": 0,
[2025-11-21 10:23:43]     "pilotErrorDiag": "",
[2025-11-21 10:23:43]  *** Listing of results directory ***
[2025-11-21 10:23:43] total 1315988
[2025-11-21 10:23:43] -rw-r--r-- 1 root root    576529 Nov 20 09:01 pilot3.tar.gz
[2025-11-21 10:23:43] -rw-r--r-- 1 root root      5112 Nov 20 09:03 queuedata.json
[2025-11-21 10:23:43] -rwx------ 1 4871 1028     36292 Nov 20 09:06 runpilot2-wrapper.sh
[2025-11-21 10:23:43] -rw-r--r-- 1 root root       100 Nov 20 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 10:23:43] -rwxr-xr-x 1 root root      7986 Nov 20 21:02 run_atlas
[2025-11-21 10:23:43] -rw-r--r-- 1 root root       105 Nov 20 21:02 job.xml
[2025-11-21 10:23:43] -rw-r--r-- 2 root root 410250176 Nov 20 21:02 EVNT.47493127._000756.pool.root.1
[2025-11-21 10:23:43] -rw-r--r-- 2 root root     15847 Nov 20 21:02 start_atlas.sh
[2025-11-21 10:23:43] drwxrwx--x 2 root root      4096 Nov 20 21:02 shared
[2025-11-21 10:23:43] -rw-r--r-- 2 root root    590097 Nov 20 21:02 input.tar.gz
[2025-11-21 10:23:43] -rw-r--r-- 1 root root         0 Nov 20 21:02 boinc_lockfile
[2025-11-21 10:23:43] -rw-r--r-- 1 root root      2784 Nov 20 21:02 pandaJob.out
[2025-11-21 10:23:43] -rw------- 1 root root    989817 Nov 20 21:02 agis_schedconf.cvmfs.json
[2025-11-21 10:23:43] drwxr-xr-x 5  320  320      4096 Nov 20 21:02 pilot3
[2025-11-21 10:23:43] -rw-r--r-- 1 root root     13016 Nov 20 21:44 init_data.xml
[2025-11-21 10:23:43] -rw-r--r-- 1 root root       533 Nov 21 10:15 boinc_task_state.xml
[2025-11-21 10:23:43] -rw------- 1 root root 915742379 Nov 21 10:22 HITS.47523449._007552.pool.root.1
[2025-11-21 10:23:43] -rw------- 1 root root        95 Nov 21 10:22 pilot_heartbeat.json
[2025-11-21 10:23:43] -rw------- 1 root root      1037 Nov 21 10:22 memory_monitor_summary.json
[2025-11-21 10:23:43] -rw------- 1 root root   1526164 Nov 21 10:22 agis_ddmendpoints.agis.ALL.json
[2025-11-21 10:23:43] -rw------- 1 root root   1980722 Nov 21 10:22 log.47523449._007552.job.log.tgz.1
[2025-11-21 10:23:43] -rw------- 1 root root      8561 Nov 21 10:22 heartbeat.json
[2025-11-21 10:23:43] -rw-r--r-- 1 root root        29 Nov 21 10:23 wrapper_checkpoint.txt
[2025-11-21 10:23:43] -rw-r--r-- 1 root root      8192 Nov 21 10:23 boinc_mmap_file
[2025-11-21 10:23:43] -rw------- 1 root root      5023 Nov 21 10:23 pilotlog.txt
[2025-11-21 10:23:43] -rw------- 1 root root   6847369 Nov 21 10:23 log.47523449._007552.job.log.1
[2025-11-21 10:23:43] -rw------- 1 root root       353 Nov 21 10:23 output.list
[2025-11-21 10:23:43] -rw-r--r-- 1 root root       620 Nov 21 10:23 runtime_log
[2025-11-21 10:23:43] -rw------- 1 root root   8847360 Nov 21 10:23 result.tar.gz
[2025-11-21 10:23:43] -rw------- 1 root root       659 Nov 21 10:23 UTQNDmkHNg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOuGKDmCXJPXo.diag
[2025-11-21 10:23:43] -rw-r--r-- 1 root root      9019 Nov 21 10:23 runtime_log.err
[2025-11-21 10:23:43] -rw-r--r-- 1 root root     21363 Nov 21 10:23 stderr.txt
[2025-11-21 10:23:43] HITS file was successfully produced:
[2025-11-21 10:23:43] -rw------- 1 root root 915742379 Nov 21 10:22 shared/HITS.pool.root.1
[2025-11-21 10:23:43]  *** Contents of shared directory: ***
[2025-11-21 10:23:43] total 1304156
[2025-11-21 10:23:43] -rw-r--r-- 2 root root 410250176 Nov 20 21:02 ATLAS.root_0
[2025-11-21 10:23:43] -rw-r--r-- 2 root root     15847 Nov 20 21:02 start_atlas.sh
[2025-11-21 10:23:43] -rw-r--r-- 2 root root    590097 Nov 20 21:02 input.tar.gz
[2025-11-21 10:23:43] -rw------- 1 root root 915742379 Nov 21 10:22 HITS.pool.root.1
[2025-11-21 10:23:43] -rw------- 1 root root   8847360 Nov 21 10:23 result.tar.gz
10:23:44 (85144): run_atlas exited; CPU time 133131.134631
10:23:44 (85144): called boinc_finish(0)

</stderr_txt>
]]>

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