Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:02:51 (1956699): wrapper (7.7.26015): starting
23:02:51 (1956699): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 23:02:51] Arguments: --nthreads 8
[2025-11-20 23:02:51] Threads: 8
[2025-11-20 23:02:51] Checking for CVMFS
[2025-11-20 23:02:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:02:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:02:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:02:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:02:52] 2.13.2.0 5895 25205 188692 153106 0 99 35356178 39288833 6305 16776704 0 14277823 99.473 15607816 36428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 23:02:52] CVMFS is ok
[2025-11-20 23:02:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 23:02:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 23:02:52] Further information can be found at the LHC@home message board.
[2025-11-20 23:02:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:02:52] Checking for apptainer binary...
[2025-11-20 23:02:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:02:52] Running /usr/bin/apptainer --version
[2025-11-20 23:02:52] apptainer version 1.4.4-1.el9
[2025-11-20 23:02:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:02:53] c-210-9.aglt2.org
[2025-11-20 23:02:53] apptainer works
[2025-11-20 23:02:53] Set ATHENA_PROC_NUMBER=8
[2025-11-20 23:02:53] Set ATHENA_CORE_NUMBER=8
[2025-11-20 23:02:53] Starting ATLAS job with PandaID=6893875909
[2025-11-20 23:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 14:11:17]  *** The last 200 lines of the pilot log: ***
[2025-11-21 14:11:17] 2025-11-21 19:10:29,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 14:11:17] 2025-11-21 19:10:31,947 | INFO     | time since job start (54422s) is within the limit (172800.0s)
[2025-11-21 14:11:17] 2025-11-21 19:10:32,400 | INFO     | monitor loop #3831: job 0:6893875909 is in state 'finished'
[2025-11-21 14:11:17] 2025-11-21 19:10:32,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 14:11:17] 2025-11-21 19:10:33,980 | INFO     | time since job start (54424s) is within the limit (172800.0s)
[2025-11-21 14:11:17] 2025-11-21 19:10:34,933 | INFO     | monitor loop #3832: job 0:6893875909 is in state 'finished'
[2025-11-21 14:11:17] 2025-11-21 19:10:34,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 14:11:17] 2025-11-21 19:10:35,989 | INFO     | time since job start (54426s) is within the limit (172800.0s)
[2025-11-21 14:11:17] 2025-11-21 19:10:37,442 | INFO     | monitor loop #3833: job 0:6893875909 is in state 'finished'
[2025-11-21 14:11:17] 2025-11-21 19:10:37,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 14:11:17] 2025-11-21 19:10:37,999 | INFO     | time since job start (54428s) is within the limit (172800.0s)
[2025-11-21 14:11:17] 2025-11-21 19:10:39,951 | INFO     | monitor loop #3834: job 0:6893875909 is in state 'finished'
[2025-11-21 14:11:17] 2025-11-21 19:10:39,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 14:11:17] 2025-11-21 19:10:40,026 | INFO     | time since job start (54431s) is within the limit (172800.0s)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,039 | INFO     | time since job start (54433s) is within the limit (172800.0s)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,301 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 14:11:17] 2025-11-21 19:10:42,311 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2293250000007
[2025-11-21 14:11:17] 2025-11-21 19:10:42,326 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893875909/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,326 | INFO     | extracted standard info from prmon json
[2025-11-21 14:11:17] 2025-11-21 19:10:42,326 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 14:11:17] 2025-11-21 19:10:42,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 14:11:17] 2025-11-21 19:10:42,358 | INFO     | fitting pss+swap vs Time
[2025-11-21 14:11:17] 2025-11-21 19:10:42,364 | INFO     | sum of square deviations: 219319234773.8275
[2025-11-21 14:11:17] 2025-11-21 19:10:42,404 | INFO     | sum of deviations: 196311784834.09976
[2025-11-21 14:11:17] 2025-11-21 19:10:42,404 | INFO     | mean x: 1763725029.0493827
[2025-11-21 14:11:17] 2025-11-21 19:10:42,404 | INFO     | mean y: 2867366.179573513
[2025-11-21 14:11:17] 2025-11-21 19:10:42,404 | INFO     | intersect: -1575835973.5722637
[2025-11-21 14:11:17] 2025-11-21 19:10:42,406 | INFO     | chi2: 17.78999933311473
[2025-11-21 14:11:17] 2025-11-21 19:10:42,407 | INFO     | sum of square deviations: 215647665050.7899
[2025-11-21 14:11:17] 2025-11-21 19:10:42,452 | INFO     | sum of deviations: 526105996066.2655
[2025-11-21 14:11:17] 2025-11-21 19:10:42,452 | INFO     | mean x: 1763724876.5553048
[2025-11-21 14:11:17] 2025-11-21 19:10:42,452 | INFO     | mean y: 2881060.208803612
[2025-11-21 14:11:17] 2025-11-21 19:10:42,452 | INFO     | intersect: -4299999904.203387
[2025-11-21 14:11:17] 2025-11-21 19:10:42,460 | INFO     | chi2: 13.755910100333466
[2025-11-21 14:11:17] 2025-11-21 19:10:42,460 | INFO     | current chi2=13.755910100333466 (change=22.676162923019973 %)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,460 | INFO     | right removable region: 885
[2025-11-21 14:11:17] 2025-11-21 19:10:42,462 | INFO     | sum of square deviations: 215647094700.79004
[2025-11-21 14:11:17] 2025-11-21 19:10:42,474 | INFO     | monitor loop #3835: job 0:6893875909 is in state 'finished'
[2025-11-21 14:11:17] 2025-11-21 19:10:42,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,507 | INFO     | sum of deviations: -94746928952.9602
[2025-11-21 14:11:17] 2025-11-21 19:10:42,511 | INFO     | mean x: 1763725181.5553048
[2025-11-21 14:11:17] 2025-11-21 19:10:42,512 | INFO     | mean y: 2879445.182844244
[2025-11-21 14:11:17] 2025-11-21 19:10:42,512 | INFO     | intersect: 777791551.9340562
[2025-11-21 14:11:17] 2025-11-21 19:10:42,513 | INFO     | chi2: 14.988970526112382
[2025-11-21 14:11:17] 2025-11-21 19:10:42,513 | INFO     | current chi2=14.988970526112382 (change=15.744962967977433 %)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,513 | INFO     | left removable region: 10
[2025-11-21 14:11:17] 2025-11-21 19:10:42,514 | INFO     | sum of square deviations: 207714178369.7899
[2025-11-21 14:11:17] 2025-11-21 19:10:42,554 | INFO     | sum of deviations: 231336429234.12152
[2025-11-21 14:11:17] 2025-11-21 19:10:42,554 | INFO     | mean x: 1763725151.0605714
[2025-11-21 14:11:17] 2025-11-21 19:10:42,554 | INFO     | mean y: 2898368.9977142857
[2025-11-21 14:11:17] 2025-11-21 19:10:42,554 | INFO     | intersect: -1961406050.657184
[2025-11-21 14:11:17] 2025-11-21 19:10:42,560 | INFO     | chi2: 10.211613776262867
[2025-11-21 14:11:17] 2025-11-21 19:10:42,560 | INFO     | current memory leak: 1.11 B/s (using 875 data points, chi2=10.21)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,561 | INFO     | could have reported an average CPU frequency of 2600 MHz (33 samples)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,561 | INFO     | ..............................
[2025-11-21 14:11:17] 2025-11-21 19:10:42,561 | INFO     | . Timing measurements:
[2025-11-21 14:11:17] 2025-11-21 19:10:42,561 | INFO     | . get job = 0 s
[2025-11-21 14:11:17] 2025-11-21 19:10:42,561 | INFO     | . initial setup = 3 s
[2025-11-21 14:11:17] 2025-11-21 19:10:42,561 | INFO     | . payload setup = 20 s
[2025-11-21 14:11:17] 2025-11-21 19:10:42,562 | INFO     | . stage-in = 0 s
[2025-11-21 14:11:17] 2025-11-21 19:10:42,562 | INFO     | . payload execution = 54327 s
[2025-11-21 14:11:17] 2025-11-21 19:10:42,562 | INFO     | . stage-out = 8 s
[2025-11-21 14:11:17] 2025-11-21 19:10:42,562 | INFO     | . log creation = 1 s
[2025-11-21 14:11:17] 2025-11-21 19:10:42,562 | INFO     | ..............................
[2025-11-21 14:11:17] 2025-11-21 19:10:42,772 | INFO     | 
[2025-11-21 14:11:17] 2025-11-21 19:10:42,773 | INFO     | job summary report
[2025-11-21 14:11:17] 2025-11-21 19:10:42,773 | INFO     | --------------------------------------------------
[2025-11-21 14:11:17] 2025-11-21 19:10:42,773 | INFO     | PanDA job id: 6893875909
[2025-11-21 14:11:17] 2025-11-21 19:10:42,773 | INFO     | task id: 47523449
[2025-11-21 14:11:17] 2025-11-21 19:10:42,773 | INFO     | errors: (none)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 14:11:17] 2025-11-21 19:10:42,773 | INFO     | pilot state: finished 
[2025-11-21 14:11:17] 2025-11-21 19:10:42,773 | INFO     | transexitcode: 0
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | exeerrorcode: 0
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | exeerrordiag: 
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | exitcode: 0
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | exitmsg: OK
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | cpuconsumptiontime: 296259 s
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | nevents: 1000
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | neventsw: 0
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | pid: 1967154
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | pgrp: 1967154
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | corecount: 8
[2025-11-21 14:11:17] 2025-11-21 19:10:42,774 | INFO     | event service: False
[2025-11-21 14:11:17] 2025-11-21 19:10:42,775 | INFO     | sizes: {0: 2298699, 1: 2298699, 12: 2298727, 16: 2299017, 22: 2299045, 54350: 2348912, 54351: 2349039, 54360: 2358089, 54362: 2358145, 54394: 2358455}
[2025-11-21 14:11:17] 2025-11-21 19:10:42,775 | INFO     | --------------------------------------------------
[2025-11-21 14:11:17] 2025-11-21 19:10:42,775 | INFO     | 
[2025-11-21 14:11:17] 2025-11-21 19:10:42,775 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-21 14:11:17] 2025-11-21 19:10:42,823 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,823 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,823 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,823 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,823 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,823 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,824 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,824 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,824 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,824 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,825 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,825 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 14:11:17] 2025-11-21 19:10:42,825 | INFO     | job 6893875909 has completed (purged errors)
[2025-11-21 14:11:17] 2025-11-21 19:10:42,825 | INFO     | overall cleanup function is called
[2025-11-21 14:11:17] 2025-11-21 19:10:43,854 | INFO     | --- collectZombieJob: --- 10, [1967154]
[2025-11-21 14:11:17] 2025-11-21 19:10:43,855 | INFO     | zombie collector waiting for pid 1967154
[2025-11-21 14:11:17] 2025-11-21 19:10:43,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 14:11:17] 2025-11-21 19:10:43,855 | INFO     | collected zombie processes
[2025-11-21 14:11:17] 2025-11-21 19:10:43,855 | INFO     | will attempt to kill all subprocesses of pid=1967154
[2025-11-21 14:11:17] 2025-11-21 19:10:44,864 | INFO     | process IDs to be killed: [1967154] (in reverse order)
[2025-11-21 14:11:17] 2025-11-21 19:10:44,972 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 14:11:17] 2025-11-21 19:10:44,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 14:11:17] 2025-11-21 19:10:44,987 | INFO     | did not find any defunct processes belonging to 1967154
[2025-11-21 14:11:17] 2025-11-21 19:10:45,000 | INFO     | did not find any defunct processes belonging to 1967154
[2025-11-21 14:11:17] 2025-11-21 19:10:45,002 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 14:11:17] 2025-11-21 19:10:45,002 | INFO     | ready for new job
[2025-11-21 14:11:17] 2025-11-21 19:10:45,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 14:11:17] 2025-11-21 19:10:45,011 | INFO     | ***************************************
[2025-11-21 14:11:17] 2025-11-21 19:10:45,011 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 14:11:17] 2025-11-21 19:10:45,011 | INFO     | ***************************************
[2025-11-21 14:11:17] 2025-11-21 19:10:45,011 | INFO     | 
[2025-11-21 14:11:17] 2025-11-21 19:10:45,013 | INFO     | architecture information:
[2025-11-21 14:11:17] 2025-11-21 19:10:45,018 | INFO     | executing command: cat /etc/os-release
[2025-11-21 14:11:17] 2025-11-21 19:10:45,055 | INFO     | cat /etc/os-release:
[2025-11-21 14:11:17] NAME="CentOS Linux"
[2025-11-21 14:11:17] VERSION="7 (Core)"
[2025-11-21 14:11:17] ID="centos"
[2025-11-21 14:11:17] ID_LIKE="rhel fedora"
[2025-11-21 14:11:17] VERSION_ID="7"
[2025-11-21 14:11:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 14:11:17] ANSI_COLOR="0;31"
[2025-11-21 14:11:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 14:11:17] HOME_URL="https://www.centos.org/"
[2025-11-21 14:11:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 14:11:17] 
[2025-11-21 14:11:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 14:11:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 14:11:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 14:11:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 14:11:17] 
[2025-11-21 14:11:17] 2025-11-21 19:10:45,055 | INFO     | ***************************************
[2025-11-21 14:11:17] 2025-11-21 19:10:45,560 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-21 14:11:17] 2025-11-21 19:10:45,596 | INFO     | sufficient remaining disk space (47491055616 B)
[2025-11-21 14:11:17] 2025-11-21 19:10:45,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 14:11:17] 2025-11-21 19:10:45,597 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 14:11:17] 2025-11-21 19:10:45,597 | INFO     | update_server=False
[2025-11-21 14:11:17] 2025-11-21 19:10:45,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 14:11:17] 2025-11-21 19:10:45,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 14:11:17] 2025-11-21 19:10:45,989 | INFO     | aborting loop
[2025-11-21 14:11:17] 2025-11-21 19:10:46,102 | INFO     | all payload control threads have been joined
[2025-11-21 14:11:17] 2025-11-21 19:10:46,192 | INFO     | all data control threads have been joined
[2025-11-21 14:11:17] 2025-11-21 19:10:46,603 | INFO     | [job] retrieve thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:46,786 | INFO     | all job control threads have been joined
[2025-11-21 14:11:17] 2025-11-21 19:10:46,884 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:46,893 | INFO     | [job] validate thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:46,893 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:46,995 | INFO     | [job] job monitor thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:47,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 14:11:17] 2025-11-21 19:10:47,111 | INFO     | [payload] control thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:47,197 | INFO     | [data] control thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:47,648 | INFO     | [data] copytool_in thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:47,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:47,775 | INFO     | [payload] failed_post thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:47,777 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:47,792 | INFO     | [job] control thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:47,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 14:11:17] 2025-11-21 19:10:48,036 | INFO     | [payload] validate_post thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:48,832 | INFO     | [job] queue monitor thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:48,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 14:11:17] 2025-11-21 19:10:49,089 | INFO     | [data] copytool_out thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:10:52,880 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 14:11:17] 2025-11-21 19:11:01,491 | INFO     | [monitor] cgroup control has ended
[2025-11-21 14:11:17] 2025-11-21 19:11:03,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496254605120)>', '<ExcThread(monitor, started 140495611221760)>']
[2025-11-21 14:11:17] 2025-11-21 19:11:08,669 | INFO     | all workflow threads have been joined
[2025-11-21 14:11:17] 2025-11-21 19:11:08,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 14:11:17] 2025-11-21 19:11:08,670 | INFO     | traces error code: 0
[2025-11-21 14:11:17] 2025-11-21 19:11:08,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 14:11:17] 2025-11-21 19:11:16,476 | INFO     | PID=1960437 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 14:11:17] 2025-11-21 19:11:16,480 | INFO     | .. there are 10 such processes running
[2025-11-21 14:11:17] 2025-11-21 19:11:16,480 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 14:11:17] 2025-11-21 19:11:16,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 14:11:17] 2025-11-21 19:11:16,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 14:11:17] 2025-11-21 19:11:16,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 14:11:17] 2025-11-21 19:11:16,480 | INFO     | [monitor] control thread has ended
[2025-11-21 14:11:17] 2025-11-21 19:11:16,802 [wrapper] ==== pilot stdout END ====
[2025-11-21 14:11:17] 2025-11-21 19:11:16,805 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 14:11:17] 2025-11-21 19:11:16,808 [wrapper] pilotpid: 1960437
[2025-11-21 14:11:17] 2025-11-21 19:11:16,810 [wrapper] Pilot exit status: 0
[2025-11-21 14:11:17] 2025-11-21 19:11:16,823 [wrapper] pandaids: 6893875909
[2025-11-21 14:11:17] 2025-11-21 19:11:16,874 [wrapper] cleanup supervisor_pilot 3208770 1960438
[2025-11-21 14:11:17] 2025-11-21 19:11:16,877 [wrapper] Test setup, not cleaning
[2025-11-21 14:11:17] 2025-11-21 19:11:16,880 [wrapper] apfmon messages muted
[2025-11-21 14:11:17] 2025-11-21 19:11:16,882 [wrapper] ==== wrapper stdout END ====
[2025-11-21 14:11:17] 2025-11-21 19:11:16,884 [wrapper] ==== wrapper stderr END ====
[2025-11-21 14:11:17]  *** Error codes and diagnostics ***
[2025-11-21 14:11:17]     "exeErrorCode": 0,
[2025-11-21 14:11:17]     "exeErrorDiag": "",
[2025-11-21 14:11:17]     "pilotErrorCode": 0,
[2025-11-21 14:11:17]     "pilotErrorDiag": "",
[2025-11-21 14:11:17]  *** Listing of results directory ***
[2025-11-21 14:11:17] total 1329292
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 11:47 pilot3.tar.gz
[2025-11-21 14:11:17] -rwx------. 1 boincer umatlas     36292 Nov 20 11:50 runpilot2-wrapper.sh
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 11:50 queuedata.json
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas       100 Nov 20 23:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 14:11:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 23:02 run_atlas
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas       105 Nov 20 23:02 job.xml
[2025-11-21 14:11:17] -rw-r--r--. 2 boincer umatlas 410748808 Nov 20 23:02 EVNT.47493127._000750.pool.root.1
[2025-11-21 14:11:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:02 start_atlas.sh
[2025-11-21 14:11:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 23:02 shared
[2025-11-21 14:11:17] -rw-r--r--. 2 boincer umatlas    590099 Nov 20 23:02 input.tar.gz
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas         0 Nov 20 23:02 boinc_lockfile
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas      2781 Nov 20 23:02 pandaJob.out
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas        57 Nov 20 23:02 setup.sh.local
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas    989817 Nov 20 23:03 agis_schedconf.cvmfs.json
[2025-11-21 14:11:17] drwx------. 5 boincer umatlas      4096 Nov 20 23:03 pilot3
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas       532 Nov 21 13:12 boinc_task_state.xml
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas 927209939 Nov 21 14:07 HITS.47523449._007491.pool.root.1
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas      6660 Nov 21 14:09 init_data.xml
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas      1055 Nov 21 14:09 memory_monitor_summary.json
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas   1526164 Nov 21 14:10 agis_ddmendpoints.agis.ALL.json
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas   2108398 Nov 21 14:10 log.47523449._007491.job.log.tgz.1
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas        95 Nov 21 14:10 pilot_heartbeat.json
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas      8621 Nov 21 14:10 heartbeat.json
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 14:11 boinc_mmap_file
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas        29 Nov 21 14:11 wrapper_checkpoint.txt
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas       823 Nov 21 14:11 pilotlog.txt
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas   7546951 Nov 21 14:11 log.47523449._007491.job.log.1
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas       353 Nov 21 14:11 output.list
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas       620 Nov 21 14:11 runtime_log
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas   9676800 Nov 21 14:11 result.tar.gz
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas      9338 Nov 21 14:11 runtime_log.err
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas       659 Nov 21 14:11 OCLODmo2Mg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYKIKDmtLzrNn.diag
[2025-11-21 14:11:17] -rw-r--r--. 1 boincer umatlas     21818 Nov 21 14:11 stderr.txt
[2025-11-21 14:11:17] HITS file was successfully produced:
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas 927209939 Nov 21 14:07 shared/HITS.pool.root.1
[2025-11-21 14:11:17]  *** Contents of shared directory: ***
[2025-11-21 14:11:17] total 1316660
[2025-11-21 14:11:17] -rw-r--r--. 2 boincer umatlas 410748808 Nov 20 23:02 ATLAS.root_0
[2025-11-21 14:11:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:02 start_atlas.sh
[2025-11-21 14:11:17] -rw-r--r--. 2 boincer umatlas    590099 Nov 20 23:02 input.tar.gz
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas 927209939 Nov 21 14:07 HITS.pool.root.1
[2025-11-21 14:11:17] -rw-------. 1 boincer umatlas   9676800 Nov 21 14:11 result.tar.gz
14:11:18 (1956699): run_atlas exited; CPU time 296551.033520
14:11:18 (1956699): called boinc_finish(0)

</stderr_txt>
]]>

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