Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:10 (2869276): wrapper (7.7.26015): starting
00:01:10 (2869276): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:01:10] Arguments: --nthreads 9
[2025-11-21 00:01:10] Threads: 9
[2025-11-21 00:01:10] Checking for CVMFS
[2025-11-21 00:01:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:01:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:01:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:01:13] 2.13.3.0 290515 25161 349932 153108 0 257 37792940 40960000 11359 16776704 0 120985531 99.745 79348548 38497 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-21 00:01:13] CVMFS is ok
[2025-11-21 00:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:01:13] Further information can be found at the LHC@home message board.
[2025-11-21 00:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:01:13] Checking for apptainer binary...
[2025-11-21 00:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:01:13] Running /usr/bin/apptainer --version
[2025-11-21 00:01:13] apptainer version 1.4.4-1.el9
[2025-11-21 00:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:01:14] c6-5-37-4.aglt2.org
[2025-11-21 00:01:14] apptainer works
[2025-11-21 00:01:14] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:01:14] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:01:14] Starting ATLAS job with PandaID=6893875907
[2025-11-21 00:01:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 12:35:53]  *** The last 200 lines of the pilot log: ***
[2025-11-21 12:35:53] 2025-11-21 17:35:20,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 12:35:53] 2025-11-21 17:35:20,246 | INFO     | fitting pss+swap vs Time
[2025-11-21 12:35:53] 2025-11-21 17:35:20,248 | INFO     | sum of square deviations: 125142591704.69562
[2025-11-21 12:35:53] 2025-11-21 17:35:20,258 | INFO     | sum of deviations: 1549201961403.3142
[2025-11-21 12:35:53] 2025-11-21 17:35:20,258 | INFO     | mean x: 1763723991.9797022
[2025-11-21 12:35:53] 2025-11-21 17:35:20,258 | INFO     | mean y: 3000808.4208389716
[2025-11-21 12:35:53] 2025-11-21 17:35:20,258 | INFO     | intersect: -21831009743.29218
[2025-11-21 12:35:53] 2025-11-21 17:35:20,259 | INFO     | chi2: 9.9958408435952
[2025-11-21 12:35:53] 2025-11-21 17:35:20,260 | INFO     | sum of square deviations: 122619816377.36366
[2025-11-21 12:35:53] 2025-11-21 17:35:20,270 | INFO     | sum of deviations: 1802983856109.6882
[2025-11-21 12:35:53] 2025-11-21 17:35:20,270 | INFO     | mean x: 1763723839.486376
[2025-11-21 12:35:53] 2025-11-21 17:35:20,270 | INFO     | mean y: 3016139.1689373297
[2025-11-21 12:35:53] 2025-11-21 17:35:20,270 | INFO     | intersect: -25930521385.00543
[2025-11-21 12:35:53] 2025-11-21 17:35:20,271 | INFO     | chi2: 6.894539120783083
[2025-11-21 12:35:53] 2025-11-21 17:35:20,271 | INFO     | current chi2=6.894539120783083 (change=31.025921394089274 %)
[2025-11-21 12:35:53] 2025-11-21 17:35:20,272 | INFO     | sum of square deviations: 120131047271.91275
[2025-11-21 12:35:53] 2025-11-21 17:35:20,284 | INFO     | sum of deviations: 1803671409143.9854
[2025-11-21 12:35:53] 2025-11-21 17:35:20,285 | INFO     | mean x: 1763723686.989026
[2025-11-21 12:35:53] 2025-11-21 17:35:20,285 | INFO     | mean y: 3016174.373113855
[2025-11-21 12:35:53] 2025-11-21 17:35:20,285 | INFO     | intersect: -26477881645.918324
[2025-11-21 12:35:53] 2025-11-21 17:35:20,289 | INFO     | chi2: 6.816916911659128
[2025-11-21 12:35:53] 2025-11-21 17:35:20,289 | INFO     | current chi2=6.816916911659128 (change=1.1258505864441162 %)
[2025-11-21 12:35:53] 2025-11-21 17:35:20,289 | INFO     | right removable region: 728
[2025-11-21 12:35:53] 2025-11-21 17:35:20,290 | INFO     | sum of square deviations: 122619374737.36366
[2025-11-21 12:35:53] 2025-11-21 17:35:20,308 | INFO     | sum of deviations: 1243551257284.6611
[2025-11-21 12:35:53] 2025-11-21 17:35:20,309 | INFO     | mean x: 1763724144.486376
[2025-11-21 12:35:53] 2025-11-21 17:35:20,309 | INFO     | mean y: 3019275.4659400545
[2025-11-21 12:35:53] 2025-11-21 17:35:20,309 | INFO     | intersect: -17883887928.857178
[2025-11-21 12:35:53] 2025-11-21 17:35:20,310 | INFO     | chi2: 5.838326653551137
[2025-11-21 12:35:53] 2025-11-21 17:35:20,310 | INFO     | current chi2=5.838326653551137 (change=41.59244084711469 %)
[2025-11-21 12:35:53] 2025-11-21 17:35:20,311 | INFO     | sum of square deviations: 120130297944.96484
[2025-11-21 12:35:53] 2025-11-21 17:35:20,321 | INFO     | sum of deviations: 1010116861324.3387
[2025-11-21 12:35:53] 2025-11-21 17:35:20,322 | INFO     | mean x: 1763724296.9931412
[2025-11-21 12:35:53] 2025-11-21 17:35:20,322 | INFO     | mean y: 3033569.4677640605
[2025-11-21 12:35:53] 2025-11-21 17:35:20,322 | INFO     | intersect: -14827260549.476112
[2025-11-21 12:35:53] 2025-11-21 17:35:20,323 | INFO     | chi2: 3.5483850045733303
[2025-11-21 12:35:53] 2025-11-21 17:35:20,323 | INFO     | current chi2=3.5483850045733303 (change=39.22256812377841 %)
[2025-11-21 12:35:53] 2025-11-21 17:35:20,324 | INFO     | sum of square deviations: 117675618512.83281
[2025-11-21 12:35:53] 2025-11-21 17:35:20,333 | INFO     | sum of deviations: 936156077906.073
[2025-11-21 12:35:53] 2025-11-21 17:35:20,334 | INFO     | mean x: 1763724449.4848065
[2025-11-21 12:35:53] 2025-11-21 17:35:20,334 | INFO     | mean y: 3038163.4157458562
[2025-11-21 12:35:53] 2025-11-21 17:35:20,334 | INFO     | intersect: -14028087264.292845
[2025-11-21 12:35:53] 2025-11-21 17:35:20,335 | INFO     | chi2: 3.418027323343263
[2025-11-21 12:35:53] 2025-11-21 17:35:20,335 | INFO     | current chi2=3.418027323343263 (change=3.67371863712804 %)
[2025-11-21 12:35:53] 2025-11-21 17:35:20,335 | INFO     | left removable region: 30
[2025-11-21 12:35:53] 2025-11-21 17:35:20,336 | INFO     | sum of square deviations: 105448264096.25775
[2025-11-21 12:35:53] 2025-11-21 17:35:20,345 | INFO     | sum of deviations: 1049392090784.1511
[2025-11-21 12:35:53] 2025-11-21 17:35:20,345 | INFO     | mean x: 1763724571.4813755
[2025-11-21 12:35:53] 2025-11-21 17:35:20,345 | INFO     | mean y: 3063367.5501432666
[2025-11-21 12:35:53] 2025-11-21 17:35:20,345 | INFO     | intersect: -17549037954.333126
[2025-11-21 12:35:53] 2025-11-21 17:35:20,346 | INFO     | chi2: 0.06235438135348218
[2025-11-21 12:35:53] 2025-11-21 17:35:20,346 | INFO     | current memory leak: 9.95 B/s (using 698 data points, chi2=0.06)
[2025-11-21 12:35:53] 2025-11-21 17:35:20,347 | INFO     | could have reported an average CPU frequency of 3041 MHz (28 samples)
[2025-11-21 12:35:53] 2025-11-21 17:35:20,347 | INFO     | ..............................
[2025-11-21 12:35:53] 2025-11-21 17:35:20,347 | INFO     | . Timing measurements:
[2025-11-21 12:35:53] 2025-11-21 17:35:20,347 | INFO     | . get job = 0 s
[2025-11-21 12:35:53] 2025-11-21 17:35:20,347 | INFO     | . initial setup = 5 s
[2025-11-21 12:35:53] 2025-11-21 17:35:20,347 | INFO     | . payload setup = 45 s
[2025-11-21 12:35:53] 2025-11-21 17:35:20,347 | INFO     | . stage-in = 0 s
[2025-11-21 12:35:53] 2025-11-21 17:35:20,347 | INFO     | . payload execution = 45055 s
[2025-11-21 12:35:53] 2025-11-21 17:35:20,347 | INFO     | . stage-out = 3 s
[2025-11-21 12:35:53] 2025-11-21 17:35:20,348 | INFO     | . log creation = 0 s
[2025-11-21 12:35:53] 2025-11-21 17:35:20,348 | INFO     | ..............................
[2025-11-21 12:35:53] 2025-11-21 17:35:20,598 | INFO     | 
[2025-11-21 12:35:53] 2025-11-21 17:35:20,598 | INFO     | job summary report
[2025-11-21 12:35:53] 2025-11-21 17:35:20,598 | INFO     | --------------------------------------------------
[2025-11-21 12:35:53] 2025-11-21 17:35:20,599 | INFO     | PanDA job id: 6893875907
[2025-11-21 12:35:53] 2025-11-21 17:35:20,599 | INFO     | task id: 47523449
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | errors: (none)
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | pilot state: finished 
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | transexitcode: 0
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | exeerrorcode: 0
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | exeerrordiag: 
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | exitcode: 0
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | exitmsg: OK
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | cpuconsumptiontime: 230199 s
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | nevents: 1000
[2025-11-21 12:35:53] 2025-11-21 17:35:20,600 | INFO     | neventsw: 0
[2025-11-21 12:35:53] 2025-11-21 17:35:20,601 | INFO     | pid: 2914307
[2025-11-21 12:35:53] 2025-11-21 17:35:20,601 | INFO     | pgrp: 2914307
[2025-11-21 12:35:53] 2025-11-21 17:35:20,601 | INFO     | corecount: 9
[2025-11-21 12:35:53] 2025-11-21 17:35:20,601 | INFO     | event service: False
[2025-11-21 12:35:53] 2025-11-21 17:35:20,601 | INFO     | sizes: {0: 2297877, 1: 2298562, 2: 2298761, 13: 2298761, 25: 2298817, 32: 2299107, 35: 2299263, 45104: 2345378, 45105: 2345377, 45109: 2354483, 45115: 2354673}
[2025-11-21 12:35:53] 2025-11-21 17:35:20,601 | INFO     | --------------------------------------------------
[2025-11-21 12:35:53] 2025-11-21 17:35:20,601 | INFO     | 
[2025-11-21 12:35:53] 2025-11-21 17:35:20,601 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-21 12:35:53] 2025-11-21 17:35:20,649 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,649 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,650 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,650 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,654 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,655 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 12:35:53] 2025-11-21 17:35:20,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,656 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 12:35:53] 2025-11-21 17:35:20,656 | INFO     | job 6893875907 has completed (purged errors)
[2025-11-21 12:35:53] 2025-11-21 17:35:20,656 | INFO     | overall cleanup function is called
[2025-11-21 12:35:53] 2025-11-21 17:35:21,676 | INFO     | --- collectZombieJob: --- 10, [2914307]
[2025-11-21 12:35:53] 2025-11-21 17:35:21,677 | INFO     | zombie collector waiting for pid 2914307
[2025-11-21 12:35:53] 2025-11-21 17:35:21,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 12:35:53] 2025-11-21 17:35:21,678 | INFO     | collected zombie processes
[2025-11-21 12:35:53] 2025-11-21 17:35:21,678 | INFO     | will attempt to kill all subprocesses of pid=2914307
[2025-11-21 12:35:53] 2025-11-21 17:35:22,013 | INFO     | process IDs to be killed: [2914307] (in reverse order)
[2025-11-21 12:35:53] 2025-11-21 17:35:22,124 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 12:35:53] 2025-11-21 17:35:22,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 12:35:53] 2025-11-21 17:35:22,137 | INFO     | did not find any defunct processes belonging to 2914307
[2025-11-21 12:35:53] 2025-11-21 17:35:22,149 | INFO     | did not find any defunct processes belonging to 2914307
[2025-11-21 12:35:53] 2025-11-21 17:35:22,151 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 12:35:53] 2025-11-21 17:35:22,151 | INFO     | ready for new job
[2025-11-21 12:35:53] 2025-11-21 17:35:22,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 12:35:53] 2025-11-21 17:35:22,155 | INFO     | ***************************************
[2025-11-21 12:35:53] 2025-11-21 17:35:22,155 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 12:35:53] 2025-11-21 17:35:22,155 | INFO     | ***************************************
[2025-11-21 12:35:53] 2025-11-21 17:35:22,155 | INFO     | 
[2025-11-21 12:35:53] 2025-11-21 17:35:22,158 | INFO     | architecture information:
[2025-11-21 12:35:53] 2025-11-21 17:35:22,163 | INFO     | executing command: cat /etc/os-release
[2025-11-21 12:35:53] 2025-11-21 17:35:22,202 | INFO     | cat /etc/os-release:
[2025-11-21 12:35:53] NAME="CentOS Linux"
[2025-11-21 12:35:53] VERSION="7 (Core)"
[2025-11-21 12:35:53] ID="centos"
[2025-11-21 12:35:53] ID_LIKE="rhel fedora"
[2025-11-21 12:35:53] VERSION_ID="7"
[2025-11-21 12:35:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 12:35:53] ANSI_COLOR="0;31"
[2025-11-21 12:35:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 12:35:53] HOME_URL="https://www.centos.org/"
[2025-11-21 12:35:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 12:35:53] 
[2025-11-21 12:35:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 12:35:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 12:35:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 12:35:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 12:35:53] 
[2025-11-21 12:35:53] 2025-11-21 17:35:22,202 | INFO     | ***************************************
[2025-11-21 12:35:53] 2025-11-21 17:35:22,706 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-21 12:35:53] 2025-11-21 17:35:22,729 | INFO     | sufficient remaining disk space (68102914048 B)
[2025-11-21 12:35:53] 2025-11-21 17:35:22,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 12:35:53] 2025-11-21 17:35:22,730 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 12:35:53] 2025-11-21 17:35:22,730 | INFO     | update_server=False
[2025-11-21 12:35:53] 2025-11-21 17:35:22,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 12:35:53] 2025-11-21 17:35:22,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:35:53] 2025-11-21 17:35:22,731 | INFO     | aborting loop
[2025-11-21 12:35:53] 2025-11-21 17:35:22,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 12:35:53] 2025-11-21 17:35:23,594 | INFO     | all data control threads have been joined
[2025-11-21 12:35:53] 2025-11-21 17:35:23,735 | INFO     | [job] retrieve thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:23,739 | INFO     | [job] job monitor thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:24,049 | INFO     | [payload] failed_post thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:24,214 | INFO     | all job control threads have been joined
[2025-11-21 12:35:53] 2025-11-21 17:35:24,222 | INFO     | all payload control threads have been joined
[2025-11-21 12:35:53] 2025-11-21 17:35:24,318 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:24,344 | INFO     | [payload] validate_post thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:24,450 | INFO     | [job] validate thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:24,486 | INFO     | [data] copytool_in thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:24,535 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:24,600 | INFO     | [data] control thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:24,744 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:24,978 | INFO     | [data] copytool_out thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:25,220 | INFO     | [job] control thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:25,228 | INFO     | [payload] control thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:25,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:35:53] 2025-11-21 17:35:25,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 12:35:53] 2025-11-21 17:35:26,451 | INFO     | [job] queue monitor thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:29,561 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:33,552 | INFO     | job.realtimelogging is not enabled
[2025-11-21 12:35:53] 2025-11-21 17:35:34,558 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 12:35:53] 2025-11-21 17:35:34,605 | INFO     | [monitor] cgroup control has ended
[2025-11-21 12:35:53] 2025-11-21 17:35:35,744 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129591609152)>', '<ExcThread(monitor, started 140128869672704)>']
[2025-11-21 12:35:53] 2025-11-21 17:35:40,770 | INFO     | all workflow threads have been joined
[2025-11-21 12:35:53] 2025-11-21 17:35:40,770 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 12:35:53] 2025-11-21 17:35:40,771 | INFO     | traces error code: 0
[2025-11-21 12:35:53] 2025-11-21 17:35:40,771 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 12:35:53] 2025-11-21 17:35:52,851 | INFO     | PID=2879394 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 12:35:53] 2025-11-21 17:35:52,852 | INFO     | .. there are 25 such processes running
[2025-11-21 12:35:53] 2025-11-21 17:35:52,852 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 12:35:53] 2025-11-21 17:35:52,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 12:35:53] 2025-11-21 17:35:52,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 12:35:53] 2025-11-21 17:35:52,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 12:35:53] 2025-11-21 17:35:52,852 | INFO     | [monitor] control thread has ended
[2025-11-21 12:35:53] 2025-11-21 17:35:53,247 [wrapper] ==== pilot stdout END ====
[2025-11-21 12:35:53] 2025-11-21 17:35:53,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 12:35:53] 2025-11-21 17:35:53,252 [wrapper] pilotpid: 2879394
[2025-11-21 12:35:53] 2025-11-21 17:35:53,255 [wrapper] Pilot exit status: 0
[2025-11-21 12:35:53] 2025-11-21 17:35:53,301 [wrapper] pandaids: 6893875907
[2025-11-21 12:35:53] 2025-11-21 17:35:53,401 [wrapper] cleanup supervisor_pilot  870673 2879395
[2025-11-21 12:35:53] 2025-11-21 17:35:53,415 [wrapper] Test setup, not cleaning
[2025-11-21 12:35:53] 2025-11-21 17:35:53,455 [wrapper] apfmon messages muted
[2025-11-21 12:35:53] 2025-11-21 17:35:53,471 [wrapper] ==== wrapper stdout END ====
[2025-11-21 12:35:53] 2025-11-21 17:35:53,498 [wrapper] ==== wrapper stderr END ====
[2025-11-21 12:35:53]  *** Error codes and diagnostics ***
[2025-11-21 12:35:53]     "exeErrorCode": 0,
[2025-11-21 12:35:53]     "exeErrorDiag": "",
[2025-11-21 12:35:53]     "pilotErrorCode": 0,
[2025-11-21 12:35:53]     "pilotErrorDiag": "",
[2025-11-21 12:35:53]  *** Listing of results directory ***
[2025-11-21 12:35:53] total 1325260
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 11:47 pilot3.tar.gz
[2025-11-21 12:35:53] -rwx------. 1 boincer umatlas     36292 Nov 20 11:50 runpilot2-wrapper.sh
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 11:50 queuedata.json
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 12:35:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:01 run_atlas
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:01 job.xml
[2025-11-21 12:35:53] -rw-r--r--. 2 boincer umatlas 407551002 Nov 21 00:01 EVNT.47493127._000749.pool.root.1
[2025-11-21 12:35:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:01 start_atlas.sh
[2025-11-21 12:35:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:01 shared
[2025-11-21 12:35:53] -rw-r--r--. 2 boincer umatlas    590094 Nov 21 00:01 input.tar.gz
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:01 boinc_lockfile
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas      2784 Nov 21 00:01 pandaJob.out
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas        57 Nov 21 00:01 setup.sh.local
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas    989817 Nov 21 00:02 agis_schedconf.cvmfs.json
[2025-11-21 12:35:53] drwx------. 5 boincer umatlas      4096 Nov 21 00:02 pilot3
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas       532 Nov 21 12:28 boinc_task_state.xml
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas      6843 Nov 21 12:31 init_data.xml
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas 929021109 Nov 21 12:34 HITS.47523449._007489.pool.root.1
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas      1054 Nov 21 12:35 memory_monitor_summary.json
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas        95 Nov 21 12:35 pilot_heartbeat.json
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas   1526164 Nov 21 12:35 agis_ddmendpoints.agis.ALL.json
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas   2101635 Nov 21 12:35 log.47523449._007489.job.log.tgz.1
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas      8633 Nov 21 12:35 heartbeat.json
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas        29 Nov 21 12:35 wrapper_checkpoint.txt
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 12:35 boinc_mmap_file
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas       823 Nov 21 12:35 pilotlog.txt
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas   6187076 Nov 21 12:35 log.47523449._007489.job.log.1
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas       353 Nov 21 12:35 output.list
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas       620 Nov 21 12:35 runtime_log
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas   8304640 Nov 21 12:35 result.tar.gz
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas      9348 Nov 21 12:35 runtime_log.err
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas       661 Nov 21 12:35 g2HODmo2Mg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWKIKDmrWMe1n.diag
[2025-11-21 12:35:53] -rw-r--r--. 1 boincer umatlas     21164 Nov 21 12:35 stderr.txt
[2025-11-21 12:35:53] HITS file was successfully produced:
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas 929021109 Nov 21 12:34 shared/HITS.pool.root.1
[2025-11-21 12:35:53]  *** Contents of shared directory: ***
[2025-11-21 12:35:53] total 1313960
[2025-11-21 12:35:53] -rw-r--r--. 2 boincer umatlas 407551002 Nov 21 00:01 ATLAS.root_0
[2025-11-21 12:35:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:01 start_atlas.sh
[2025-11-21 12:35:53] -rw-r--r--. 2 boincer umatlas    590094 Nov 21 00:01 input.tar.gz
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas 929021109 Nov 21 12:34 HITS.pool.root.1
[2025-11-21 12:35:53] -rw-------. 1 boincer umatlas   8304640 Nov 21 12:35 result.tar.gz
12:36:15 (2869276): run_atlas exited; CPU time 230848.747146
12:36:15 (2869276): called boinc_finish(0)

</stderr_txt>
]]>

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