Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:44:32 (4409): wrapper (7.7.26015): starting
02:44:32 (4409): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 02:44:32] Arguments: --nthreads 8
[2025-11-24 02:44:32] Threads: 8
[2025-11-24 02:44:32] Checking for CVMFS
[2025-11-24 02:44:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:44:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:44:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:44:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:44:35] 2.11.2.0 27053 168652 135288 153228 2 85 24771179 25165824 4632 130560 4 57930285 99.904 28418571 2689 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 02:44:35] CVMFS is ok
[2025-11-24 02:44:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:44:35] Checking for apptainer binary...
[2025-11-24 02:44:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:44:35] Running /usr/bin/apptainer --version
[2025-11-24 02:44:35] apptainer version 1.3.2-1.el7
[2025-11-24 02:44:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:44:48] cg-vwn373.simple-grid.lan
[2025-11-24 02:44:48] apptainer works
[2025-11-24 02:44:49] Set ATHENA_PROC_NUMBER=8
[2025-11-24 02:44:49] Set ATHENA_CORE_NUMBER=8
[2025-11-24 02:44:49] Starting ATLAS job with PandaID=6893874544
[2025-11-24 02:44:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:35:10]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:35:10] 2025-11-25 01:34:20,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:35:10] 2025-11-25 01:34:21,638 | INFO     | time since job start (85552s) is within the limit (172800.0s)
[2025-11-25 02:35:10] 2025-11-25 01:34:23,454 | INFO     | monitor loop #5757: job 0:6893874544 is in state 'finished'
[2025-11-25 02:35:10] 2025-11-25 01:34:23,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:35:10] 2025-11-25 01:34:23,648 | INFO     | time since job start (85554s) is within the limit (172800.0s)
[2025-11-25 02:35:10] 2025-11-25 01:34:25,655 | INFO     | time since job start (85556s) is within the limit (172800.0s)
[2025-11-25 02:35:10] 2025-11-25 01:34:25,959 | INFO     | monitor loop #5758: job 0:6893874544 is in state 'finished'
[2025-11-25 02:35:10] 2025-11-25 01:34:25,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:35:10] 2025-11-25 01:34:27,666 | INFO     | time since job start (85558s) is within the limit (172800.0s)
[2025-11-25 02:35:10] 2025-11-25 01:34:28,466 | INFO     | monitor loop #5759: job 0:6893874544 is in state 'finished'
[2025-11-25 02:35:10] 2025-11-25 01:34:28,467 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:35:10] 2025-11-25 01:34:29,466 [wrapper] supervise_pilot (15 min periods counter: 96)
[2025-11-25 02:35:10] 2025-11-25 01:34:29,675 | INFO     | time since job start (85560s) is within the limit (172800.0s)
[2025-11-25 02:35:10] 2025-11-25 01:34:30,974 | INFO     | monitor loop #5760: job 0:6893874544 is in state 'finished'
[2025-11-25 02:35:10] 2025-11-25 01:34:30,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:35:10] 2025-11-25 01:34:31,357 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 02:35:10] 2025-11-25 01:34:31,358 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 02:35:10] 2025-11-25 01:34:31,360 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6893874544/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 02:35:10] 2025-11-25 01:34:31,361 | INFO     | extracted standard info from prmon json
[2025-11-25 02:35:10] 2025-11-25 01:34:31,361 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 02:35:10] 2025-11-25 01:34:31,361 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:35:10] 2025-11-25 01:34:31,387 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:35:10] 2025-11-25 01:34:31,390 | INFO     | sum of square deviations: 836361455911.994
[2025-11-25 02:35:10] 2025-11-25 01:34:31,470 | INFO     | sum of deviations: 3033044074673.2173
[2025-11-25 02:35:10] 2025-11-25 01:34:31,470 | INFO     | mean x: 1763991886.6652298
[2025-11-25 02:35:10] 2025-11-25 01:34:31,470 | INFO     | mean y: 2833013.2751436783
[2025-11-25 02:35:10] 2025-11-25 01:34:31,471 | INFO     | intersect: -6394239809.488445
[2025-11-25 02:35:10] 2025-11-25 01:34:31,472 | INFO     | chi2: 26.677771436232163
[2025-11-25 02:35:10] 2025-11-25 01:34:31,474 | INFO     | sum of square deviations: 827381726425.1847
[2025-11-25 02:35:10] 2025-11-25 01:34:31,569 | INFO     | sum of deviations: 3483953634917.329
[2025-11-25 02:35:10] 2025-11-25 01:34:31,569 | INFO     | mean x: 1763991734.1694305
[2025-11-25 02:35:10] 2025-11-25 01:34:31,569 | INFO     | mean y: 2840669.696467195
[2025-11-25 02:35:10] 2025-11-25 01:34:31,569 | INFO     | intersect: -7425006982.65246
[2025-11-25 02:35:10] 2025-11-25 01:34:31,571 | INFO     | chi2: 23.51374932468334
[2025-11-25 02:35:10] 2025-11-25 01:34:31,571 | INFO     | current chi2=23.51374932468334 (change=11.860144012073054 %)
[2025-11-25 02:35:10] 2025-11-25 01:34:31,571 | INFO     | right removable region: 1386
[2025-11-25 02:35:10] 2025-11-25 01:34:31,573 | INFO     | sum of square deviations: 827380737005.1841
[2025-11-25 02:35:10] 2025-11-25 01:34:31,641 | INFO     | sum of deviations: 2464398173576.2007
[2025-11-25 02:35:10] 2025-11-25 01:34:31,642 | INFO     | mean x: 1763992039.1694305
[2025-11-25 02:35:10] 2025-11-25 01:34:31,642 | INFO     | mean y: 2842668.6842105263
[2025-11-25 02:35:10] 2025-11-25 01:34:31,642 | INFO     | intersect: -5251302811.264115
[2025-11-25 02:35:10] 2025-11-25 01:34:31,644 | INFO     | chi2: 22.20545594287512
[2025-11-25 02:35:10] 2025-11-25 01:34:31,644 | INFO     | current chi2=22.20545594287512 (change=16.76420200258186 %)
[2025-11-25 02:35:10] 2025-11-25 01:34:31,644 | INFO     | left removable region: 10
[2025-11-25 02:35:10] 2025-11-25 01:34:31,646 | INFO     | sum of square deviations: 807851100454.0212
[2025-11-25 02:35:10] 2025-11-25 01:34:31,696 | INFO     | time since job start (85562s) is within the limit (172800.0s)
[2025-11-25 02:35:10] 2025-11-25 01:34:31,727 | INFO     | sum of deviations: 2509103363648.6094
[2025-11-25 02:35:10] 2025-11-25 01:34:31,733 | INFO     | mean x: 1763992008.6787791
[2025-11-25 02:35:10] 2025-11-25 01:34:31,733 | INFO     | mean y: 2860914.363372093
[2025-11-25 02:35:10] 2025-11-25 01:34:31,733 | INFO     | intersect: -5475918875.548048
[2025-11-25 02:35:10] 2025-11-25 01:34:31,735 | INFO     | chi2: 14.732494767797526
[2025-11-25 02:35:10] 2025-11-25 01:34:31,735 | INFO     | current memory leak: 3.11 B/s (using 1376 data points, chi2=14.73)
[2025-11-25 02:35:10] 2025-11-25 01:34:31,737 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-25 02:35:10] 2025-11-25 01:34:31,737 | INFO     | ..............................
[2025-11-25 02:35:10] 2025-11-25 01:34:31,737 | INFO     | . Timing measurements:
[2025-11-25 02:35:10] 2025-11-25 01:34:31,737 | INFO     | . get job = 0 s
[2025-11-25 02:35:10] 2025-11-25 01:34:31,737 | INFO     | . initial setup = 5 s
[2025-11-25 02:35:10] 2025-11-25 01:34:31,737 | INFO     | . payload setup = 178 s
[2025-11-25 02:35:10] 2025-11-25 01:34:31,737 | INFO     | . stage-in = 0 s
[2025-11-25 02:35:10] 2025-11-25 01:34:31,738 | INFO     | . payload execution = 85051 s
[2025-11-25 02:35:10] 2025-11-25 01:34:31,738 | INFO     | . stage-out = 6 s
[2025-11-25 02:35:10] 2025-11-25 01:34:31,738 | INFO     | . log creation = 2 s
[2025-11-25 02:35:10] 2025-11-25 01:34:31,738 | INFO     | ..............................
[2025-11-25 02:35:10] 2025-11-25 01:34:31,889 | INFO     | 
[2025-11-25 02:35:10] 2025-11-25 01:34:31,890 | INFO     | job summary report
[2025-11-25 02:35:10] 2025-11-25 01:34:31,890 | INFO     | --------------------------------------------------
[2025-11-25 02:35:10] 2025-11-25 01:34:31,890 | INFO     | PanDA job id: 6893874544
[2025-11-25 02:35:10] 2025-11-25 01:34:31,890 | INFO     | task id: 47523449
[2025-11-25 02:35:10] 2025-11-25 01:34:31,890 | INFO     | errors: (none)
[2025-11-25 02:35:10] 2025-11-25 01:34:31,890 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:35:10] 2025-11-25 01:34:31,890 | INFO     | pilot state: finished 
[2025-11-25 02:35:10] 2025-11-25 01:34:31,890 | INFO     | transexitcode: 0
[2025-11-25 02:35:10] 2025-11-25 01:34:31,890 | INFO     | exeerrorcode: 0
[2025-11-25 02:35:10] 2025-11-25 01:34:31,890 | INFO     | exeerrordiag: 
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | exitcode: 0
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | exitmsg: OK
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | cpuconsumptiontime: 340015 s
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | nevents: 1000
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | neventsw: 0
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | pid: 14783
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | pgrp: 14783
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | corecount: 8
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | event service: False
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | sizes: {0: 2298574, 1: 2298829, 2: 2298829, 12: 2298857, 23: 2298885, 34: 2298913, 45: 2299069, 55: 2299097, 66: 2299125, 77: 2299153, 88: 2299209, 98: 2299807, 10
[2025-11-25 02:35:10] 2025-11-25 01:34:31,891 | INFO     | --------------------------------------------------
[2025-11-25 02:35:10] 2025-11-25 01:34:31,892 | INFO     | 
[2025-11-25 02:35:10] 2025-11-25 01:34:31,892 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-11-25 02:35:10] 2025-11-25 01:34:32,189 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,191 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,191 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,191 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,191 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,191 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:35:10] 2025-11-25 01:34:32,191 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,191 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:35:10] 2025-11-25 01:34:32,191 | INFO     | job 6893874544 has completed (purged errors)
[2025-11-25 02:35:10] 2025-11-25 01:34:32,191 | INFO     | overall cleanup function is called
[2025-11-25 02:35:10] 2025-11-25 01:34:33,213 | INFO     | --- collectZombieJob: --- 10, [14783]
[2025-11-25 02:35:10] 2025-11-25 01:34:33,214 | INFO     | zombie collector waiting for pid 14783
[2025-11-25 02:35:10] 2025-11-25 01:34:33,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:35:10] 2025-11-25 01:34:33,214 | INFO     | collected zombie processes
[2025-11-25 02:35:10] 2025-11-25 01:34:33,214 | INFO     | will attempt to kill all subprocesses of pid=14783
[2025-11-25 02:35:10] 2025-11-25 01:34:33,288 | INFO     | process IDs to be killed: [14783] (in reverse order)
[2025-11-25 02:35:10] 2025-11-25 01:34:34,228 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:35:10] 2025-11-25 01:34:34,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:35:10] 2025-11-25 01:34:34,230 | INFO     | did not find any defunct processes belonging to 14783
[2025-11-25 02:35:10] 2025-11-25 01:34:34,232 | INFO     | did not find any defunct processes belonging to 14783
[2025-11-25 02:35:10] 2025-11-25 01:34:34,295 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:35:10] 2025-11-25 01:34:34,295 | INFO     | ready for new job
[2025-11-25 02:35:10] 2025-11-25 01:34:34,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:35:10] 2025-11-25 01:34:34,301 | INFO     | ***************************************
[2025-11-25 02:35:10] 2025-11-25 01:34:34,301 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:35:10] 2025-11-25 01:34:34,301 | INFO     | ***************************************
[2025-11-25 02:35:10] 2025-11-25 01:34:34,301 | INFO     | 
[2025-11-25 02:35:10] 2025-11-25 01:34:34,302 | INFO     | pilot is running in a VM
[2025-11-25 02:35:10] 2025-11-25 01:34:34,302 | INFO     | architecture information:
[2025-11-25 02:35:10] 2025-11-25 01:34:34,316 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:35:10] 2025-11-25 01:34:34,607 | INFO     | cat /etc/os-release:
[2025-11-25 02:35:10] NAME="CentOS Linux"
[2025-11-25 02:35:10] VERSION="7 (Core)"
[2025-11-25 02:35:10] ID="centos"
[2025-11-25 02:35:10] ID_LIKE="rhel fedora"
[2025-11-25 02:35:10] VERSION_ID="7"
[2025-11-25 02:35:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:35:10] ANSI_COLOR="0;31"
[2025-11-25 02:35:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:35:10] HOME_URL="https://www.centos.org/"
[2025-11-25 02:35:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:35:10] 
[2025-11-25 02:35:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:35:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:35:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:35:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:35:10] 
[2025-11-25 02:35:10] 2025-11-25 01:34:34,607 | INFO     | ***************************************
[2025-11-25 02:35:10] 2025-11-25 01:34:35,111 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-11-25 02:35:10] 2025-11-25 01:34:35,342 | INFO     | sufficient remaining disk space (492099862528 B)
[2025-11-25 02:35:10] 2025-11-25 01:34:35,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:35:10] 2025-11-25 01:34:35,342 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:35:10] 2025-11-25 01:34:35,343 | INFO     | update_server=False
[2025-11-25 02:35:10] 2025-11-25 01:34:35,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:35:10] 2025-11-25 01:34:35,343 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:35:10] 2025-11-25 01:34:35,343 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:35:10] 2025-11-25 01:34:35,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:35:10] 2025-11-25 01:34:35,344 | INFO     | aborting loop
[2025-11-25 02:35:10] 2025-11-25 01:34:35,401 | INFO     | all data control threads have been joined
[2025-11-25 02:35:10] 2025-11-25 01:34:35,492 | INFO     | all payload control threads have been joined
[2025-11-25 02:35:10] 2025-11-25 01:34:36,349 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:36,351 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:36,408 | INFO     | [data] control thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:36,498 | INFO     | [payload] control thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:36,750 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:36,773 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:36,775 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:36,845 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:36,854 | INFO     | all job control threads have been joined
[2025-11-25 02:35:10] 2025-11-25 01:34:36,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:35:10] 2025-11-25 01:34:37,017 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:37,343 | INFO     | [job] validate thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:37,350 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:37,685 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:37,842 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:37,860 | INFO     | [job] control thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:37,910 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:39,352 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:35:10] 2025-11-25 01:34:58,291 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:35:10] 2025-11-25 01:34:58,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757338761024)>', '<ExcThread(monitor, started 139756667127552)>']
[2025-11-25 02:35:10] 2025-11-25 01:35:03,903 | INFO     | all workflow threads have been joined
[2025-11-25 02:35:10] 2025-11-25 01:35:03,904 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:35:10] 2025-11-25 01:35:03,904 | INFO     | traces error code: 0
[2025-11-25 02:35:10] 2025-11-25 01:35:03,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:35:10] 2025-11-25 01:35:04,830 | INFO     | PID=8229 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 02:35:10] 2025-11-25 01:35:04,830 | INFO     | .. there are 2 such processes running
[2025-11-25 02:35:10] 2025-11-25 01:35:04,830 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:35:10] 2025-11-25 01:35:04,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:35:10] 2025-11-25 01:35:04,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:35:10] 2025-11-25 01:35:04,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:35:10] 2025-11-25 01:35:04,831 | INFO     | [monitor] control thread has ended
[2025-11-25 02:35:10] 2025-11-25 01:35:05,227 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:35:10] 2025-11-25 01:35:05,281 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:35:10] 2025-11-25 01:35:05,391 [wrapper] pilotpid: 8229
[2025-11-25 02:35:10] 2025-11-25 01:35:05,504 [wrapper] Pilot exit status: 0
[2025-11-25 02:35:10] 2025-11-25 01:35:05,856 [wrapper] pandaids: 6893874544
[2025-11-25 02:35:10] 2025-11-25 01:35:06,722 [wrapper] cleanup supervisor_pilot  6061 8230
[2025-11-25 02:35:10] 2025-11-25 01:35:06,776 [wrapper] Test setup, not cleaning
[2025-11-25 02:35:10] 2025-11-25 01:35:06,877 [wrapper] apfmon messages muted
[2025-11-25 02:35:10] 2025-11-25 01:35:07,035 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:35:10] 2025-11-25 01:35:07,139 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:35:10]  *** Error codes and diagnostics ***
[2025-11-25 02:35:10]     "exeErrorCode": 0,
[2025-11-25 02:35:10]     "exeErrorDiag": "",
[2025-11-25 02:35:10]     "pilotErrorCode": 0,
[2025-11-25 02:35:10]     "pilotErrorDiag": "",
[2025-11-25 02:35:10]  *** Listing of results directory ***
[2025-11-25 02:35:10] total 1326856
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc    576529 Nov 20 17:08 pilot3.tar.gz
[2025-11-25 02:35:10] -rwx------. 1 boinc boinc     36292 Nov 20 17:10 runpilot2-wrapper.sh
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc      5112 Nov 20 17:10 queuedata.json
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc       100 Nov 24 02:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:35:10] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 02:44 run_atlas
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc       105 Nov 24 02:44 job.xml
[2025-11-25 02:35:10] -rw-r--r--. 2 boinc boinc 408666791 Nov 24 02:44 EVNT.47493127._000726.pool.root.1
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc      6393 Nov 24 02:44 init_data.xml
[2025-11-25 02:35:10] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:44 start_atlas.sh
[2025-11-25 02:35:10] drwxrwx--x. 2 boinc boinc        68 Nov 24 02:44 shared
[2025-11-25 02:35:10] -rw-r--r--. 2 boinc boinc    590099 Nov 24 02:44 input.tar.gz
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc         0 Nov 24 02:44 boinc_lockfile
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc      2782 Nov 24 02:44 pandaJob.out
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc    989786 Nov 24 02:48 agis_schedconf.cvmfs.json
[2025-11-25 02:35:10] drwx------. 5 boinc boinc      4096 Nov 24 02:48 pilot3
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc       533 Nov 25 02:06 boinc_task_state.xml
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc 918326493 Nov 25 02:31 HITS.47523449._007251.pool.root.1
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc      1031 Nov 25 02:32 memory_monitor_summary.json
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc   1516227 Nov 25 02:32 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc   2489125 Nov 25 02:32 log.47523449._007251.job.log.tgz.1
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc        95 Nov 25 02:34 pilot_heartbeat.json
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc      7942 Nov 25 02:34 heartbeat.json
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc        29 Nov 25 02:34 wrapper_checkpoint.txt
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc      8192 Nov 25 02:34 boinc_mmap_file
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc       819 Nov 25 02:35 pilotlog.txt
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc  11420237 Nov 25 02:35 log.47523449._007251.job.log.1
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc       353 Nov 25 02:35 output.list
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc       620 Nov 25 02:35 runtime_log
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc  13926400 Nov 25 02:35 result.tar.gz
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc      8833 Nov 25 02:35 runtime_log.err
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc       662 Nov 25 02:35 cAjLDm5PMg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRHIKDmDLAIzn.diag
[2025-11-25 02:35:10] -rw-r--r--. 1 boinc boinc     21420 Nov 25 02:35 stderr.txt
[2025-11-25 02:35:10] HITS file was successfully produced:
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc 918326493 Nov 25 02:31 shared/HITS.pool.root.1
[2025-11-25 02:35:10]  *** Contents of shared directory: ***
[2025-11-25 02:35:10] total 1310092
[2025-11-25 02:35:10] -rw-r--r--. 2 boinc boinc 408666791 Nov 24 02:44 ATLAS.root_0
[2025-11-25 02:35:10] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:44 start_atlas.sh
[2025-11-25 02:35:10] -rw-r--r--. 2 boinc boinc    590099 Nov 24 02:44 input.tar.gz
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc 918326493 Nov 25 02:31 HITS.pool.root.1
[2025-11-25 02:35:10] -rw-------. 1 boinc boinc  13926400 Nov 25 02:35 result.tar.gz
02:35:12 (4409): run_atlas exited; CPU time 340308.382985
02:35:12 (4409): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN