Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:28:04 (266134): wrapper (7.7.26015): starting
00:28:04 (266134): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 00:28:04] Arguments: --nthreads 8
[2025-11-21 00:28:04] Threads: 8
[2025-11-21 00:28:04] Checking for CVMFS
[2025-11-21 00:28:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:28:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:28:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:28:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:28:05] 2.13.2.0 7693 26149 177316 153110 0 63 23675593 39288833 3072 16776704 0 18964590 99.579 17782933 27982 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:28:05] CVMFS is ok
[2025-11-21 00:28:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:28:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:28:05] Further information can be found at the LHC@home message board.
[2025-11-21 00:28:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:28:05] Checking for apptainer binary...
[2025-11-21 00:28:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:28:05] Running /usr/bin/apptainer --version
[2025-11-21 00:28:05] apptainer version 1.4.4-1.el9
[2025-11-21 00:28:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:28:05] c-210-18.aglt2.org
[2025-11-21 00:28:05] apptainer works
[2025-11-21 00:28:05] Set ATHENA_PROC_NUMBER=8
[2025-11-21 00:28:05] Set ATHENA_CORE_NUMBER=8
[2025-11-21 00:28:05] Starting ATLAS job with PandaID=6893874545
[2025-11-21 00:28:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 11:36:28]  *** The last 200 lines of the pilot log: ***
[2025-11-21 11:36:28] 2025-11-21 16:35:33,745 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 11:36:28] 2025-11-21 16:35:33,897 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 11:36:28] 2025-11-21 16:35:33,904 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.9839500000007
[2025-11-21 11:36:28] 2025-11-21 16:35:33,910 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6893874545/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 11:36:28] 2025-11-21 16:35:33,911 | INFO     | extracted standard info from prmon json
[2025-11-21 11:36:28] 2025-11-21 16:35:33,911 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 11:36:28] 2025-11-21 16:35:33,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 11:36:28] 2025-11-21 16:35:33,923 | INFO     | fitting pss+swap vs Time
[2025-11-21 11:36:28] 2025-11-21 16:35:33,925 | INFO     | sum of square deviations: 87539071023.8476
[2025-11-21 11:36:28] 2025-11-21 16:35:33,940 | INFO     | sum of deviations: 826363974207.487
[2025-11-21 11:36:28] 2025-11-21 16:35:33,940 | INFO     | mean x: 1763722897.765244
[2025-11-21 11:36:28] 2025-11-21 16:35:33,944 | INFO     | mean y: 2918688.951219512
[2025-11-21 11:36:28] 2025-11-21 16:35:33,944 | INFO     | intersect: -16646527622.867456
[2025-11-21 11:36:28] 2025-11-21 16:35:33,945 | INFO     | chi2: 5.770529194033987
[2025-11-21 11:36:28] 2025-11-21 16:35:33,946 | INFO     | sum of square deviations: 85552742663.49318
[2025-11-21 11:36:28] 2025-11-21 16:35:33,958 | INFO     | sum of deviations: 1055955647761.9823
[2025-11-21 11:36:28] 2025-11-21 16:35:33,958 | INFO     | mean x: 1763722745.267281
[2025-11-21 11:36:28] 2025-11-21 16:35:33,958 | INFO     | mean y: 2936320.712749616
[2025-11-21 11:36:28] 2025-11-21 16:35:33,958 | INFO     | intersect: -21766242971.139187
[2025-11-21 11:36:28] 2025-11-21 16:35:33,959 | INFO     | chi2: 2.4563522592246163
[2025-11-21 11:36:28] 2025-11-21 16:35:33,959 | INFO     | current chi2=2.4563522592246163 (change=57.43280769181134 %)
[2025-11-21 11:36:28] 2025-11-21 16:35:33,960 | INFO     | sum of square deviations: 83596693940.63315
[2025-11-21 11:36:28] 2025-11-21 16:35:33,971 | INFO     | sum of deviations: 1134011868099.8604
[2025-11-21 11:36:28] 2025-11-21 16:35:33,971 | INFO     | mean x: 1763722592.7693498
[2025-11-21 11:36:28] 2025-11-21 16:35:33,971 | INFO     | mean y: 2942398.811145511
[2025-11-21 11:36:28] 2025-11-21 16:35:33,971 | INFO     | intersect: -23922433808.729717
[2025-11-21 11:36:28] 2025-11-21 16:35:33,972 | INFO     | chi2: 1.8974781657594317
[2025-11-21 11:36:28] 2025-11-21 16:35:33,972 | INFO     | current chi2=1.8974781657594317 (change=22.75219652907606 %)
[2025-11-21 11:36:28] 2025-11-21 16:35:33,972 | INFO     | right removable region: 645
[2025-11-21 11:36:28] 2025-11-21 16:35:33,973 | INFO     | sum of square deviations: 85552676295.0261
[2025-11-21 11:36:28] 2025-11-21 16:35:33,984 | INFO     | sum of deviations: 670650324264.3625
[2025-11-21 11:36:28] 2025-11-21 16:35:33,984 | INFO     | mean x: 1763723050.265745
[2025-11-21 11:36:28] 2025-11-21 16:35:33,984 | INFO     | mean y: 2930614.159754224
[2025-11-21 11:36:28] 2025-11-21 16:35:33,984 | INFO     | intersect: -13822954054.769312
[2025-11-21 11:36:28] 2025-11-21 16:35:33,985 | INFO     | chi2: 3.991074815092869
[2025-11-21 11:36:28] 2025-11-21 16:35:33,986 | INFO     | current chi2=3.991074815092869 (change=30.83693573166311 %)
[2025-11-21 11:36:28] 2025-11-21 16:35:33,986 | INFO     | sum of square deviations: 83596720289.80962
[2025-11-21 11:36:28] 2025-11-21 16:35:33,997 | INFO     | sum of deviations: 627447989691.8068
[2025-11-21 11:36:28] 2025-11-21 16:35:33,998 | INFO     | mean x: 1763723202.760062
[2025-11-21 11:36:28] 2025-11-21 16:35:33,998 | INFO     | mean y: 2933980.8374613
[2025-11-21 11:36:28] 2025-11-21 16:35:33,998 | INFO     | intersect: -13234960689.050623
[2025-11-21 11:36:28] 2025-11-21 16:35:33,999 | INFO     | chi2: 3.9493990044002016
[2025-11-21 11:36:28] 2025-11-21 16:35:33,999 | INFO     | current chi2=3.9493990044002016 (change=1.0442252431616617 %)
[2025-11-21 11:36:28] 2025-11-21 16:35:34,000 | INFO     | left removable region: 20
[2025-11-21 11:36:28] 2025-11-21 16:35:34,001 | INFO     | sum of square deviations: 75706584915.91046
[2025-11-21 11:36:28] 2025-11-21 16:35:34,011 | INFO     | sum of deviations: 871279365252.7521
[2025-11-21 11:36:28] 2025-11-21 16:35:34,011 | INFO     | mean x: 1763723172.2656
[2025-11-21 11:36:28] 2025-11-21 16:35:34,011 | INFO     | mean y: 2962880.128
[2025-11-21 11:36:28] 2025-11-21 16:35:34,011 | INFO     | intersect: -20295081308.762512
[2025-11-21 11:36:28] 2025-11-21 16:35:34,012 | INFO     | chi2: 0.04270650817929949
[2025-11-21 11:36:28] 2025-11-21 16:35:34,012 | INFO     | current memory leak: 11.51 B/s (using 625 data points, chi2=0.04)
[2025-11-21 11:36:28] 2025-11-21 16:35:34,013 | INFO     | could have reported an average CPU frequency of 2607 MHz (26 samples)
[2025-11-21 11:36:28] 2025-11-21 16:35:34,013 | INFO     | ..............................
[2025-11-21 11:36:28] 2025-11-21 16:35:34,014 | INFO     | . Timing measurements:
[2025-11-21 11:36:28] 2025-11-21 16:35:34,014 | INFO     | . get job = 0 s
[2025-11-21 11:36:28] 2025-11-21 16:35:34,014 | INFO     | . initial setup = 2 s
[2025-11-21 11:36:28] 2025-11-21 16:35:34,014 | INFO     | . payload setup = 5 s
[2025-11-21 11:36:28] 2025-11-21 16:35:34,014 | INFO     | . stage-in = 0 s
[2025-11-21 11:36:28] 2025-11-21 16:35:34,014 | INFO     | . payload execution = 39998 s
[2025-11-21 11:36:28] 2025-11-21 16:35:34,014 | INFO     | . stage-out = 4 s
[2025-11-21 11:36:28] 2025-11-21 16:35:34,014 | INFO     | . log creation = 1 s
[2025-11-21 11:36:28] 2025-11-21 16:35:34,014 | INFO     | ..............................
[2025-11-21 11:36:28] 2025-11-21 16:35:34,119 | INFO     | 
[2025-11-21 11:36:28] 2025-11-21 16:35:34,119 | INFO     | job summary report
[2025-11-21 11:36:28] 2025-11-21 16:35:34,120 | INFO     | --------------------------------------------------
[2025-11-21 11:36:28] 2025-11-21 16:35:34,120 | INFO     | PanDA job id: 6893874545
[2025-11-21 11:36:28] 2025-11-21 16:35:34,120 | INFO     | task id: 47523449
[2025-11-21 11:36:28] 2025-11-21 16:35:34,120 | INFO     | errors: (none)
[2025-11-21 11:36:28] 2025-11-21 16:35:34,120 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 11:36:28] 2025-11-21 16:35:34,120 | INFO     | pilot state: finished 
[2025-11-21 11:36:28] 2025-11-21 16:35:34,120 | INFO     | transexitcode: 0
[2025-11-21 11:36:28] 2025-11-21 16:35:34,120 | INFO     | exeerrorcode: 0
[2025-11-21 11:36:28] 2025-11-21 16:35:34,120 | INFO     | exeerrordiag: 
[2025-11-21 11:36:28] 2025-11-21 16:35:34,120 | INFO     | exitcode: 0
[2025-11-21 11:36:28] 2025-11-21 16:35:34,121 | INFO     | exitmsg: OK
[2025-11-21 11:36:28] 2025-11-21 16:35:34,121 | INFO     | cpuconsumptiontime: 293397 s
[2025-11-21 11:36:28] 2025-11-21 16:35:34,121 | INFO     | nevents: 1000
[2025-11-21 11:36:28] 2025-11-21 16:35:34,121 | INFO     | neventsw: 0
[2025-11-21 11:36:28] 2025-11-21 16:35:34,121 | INFO     | pid: 276221
[2025-11-21 11:36:28] 2025-11-21 16:35:34,121 | INFO     | pgrp: 276221
[2025-11-21 11:36:28] 2025-11-21 16:35:34,121 | INFO     | corecount: 8
[2025-11-21 11:36:28] 2025-11-21 16:35:34,121 | INFO     | event service: False
[2025-11-21 11:36:28] 2025-11-21 16:35:34,121 | INFO     | sizes: {0: 2298806, 4: 2299068, 11: 2299096, 40007: 2342457, 40013: 2351479, 40015: 2351535, 40023: 2351909}
[2025-11-21 11:36:28] 2025-11-21 16:35:34,121 | INFO     | --------------------------------------------------
[2025-11-21 11:36:28] 2025-11-21 16:35:34,122 | INFO     | 
[2025-11-21 11:36:28] 2025-11-21 16:35:34,122 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-21 11:36:28] 2025-11-21 16:35:34,140 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,140 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,140 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,141 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,141 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,141 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,142 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 11:36:28] 2025-11-21 16:35:34,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,142 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 11:36:28] 2025-11-21 16:35:34,143 | INFO     | job 6893874545 has completed (purged errors)
[2025-11-21 11:36:28] 2025-11-21 16:35:34,143 | INFO     | overall cleanup function is called
[2025-11-21 11:36:28] 2025-11-21 16:35:35,159 | INFO     | --- collectZombieJob: --- 10, [276221]
[2025-11-21 11:36:28] 2025-11-21 16:35:35,159 | INFO     | zombie collector waiting for pid 276221
[2025-11-21 11:36:28] 2025-11-21 16:35:35,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 11:36:28] 2025-11-21 16:35:35,160 | INFO     | collected zombie processes
[2025-11-21 11:36:28] 2025-11-21 16:35:35,160 | INFO     | will attempt to kill all subprocesses of pid=276221
[2025-11-21 11:36:28] 2025-11-21 16:35:35,462 | INFO     | process IDs to be killed: [276221] (in reverse order)
[2025-11-21 11:36:28] 2025-11-21 16:35:35,570 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 11:36:28] 2025-11-21 16:35:35,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 11:36:28] 2025-11-21 16:35:35,586 | INFO     | did not find any defunct processes belonging to 276221
[2025-11-21 11:36:28] 2025-11-21 16:35:35,600 | INFO     | did not find any defunct processes belonging to 276221
[2025-11-21 11:36:28] 2025-11-21 16:35:35,601 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 11:36:28] 2025-11-21 16:35:35,601 | INFO     | ready for new job
[2025-11-21 11:36:28] 2025-11-21 16:35:35,601 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 11:36:28] 2025-11-21 16:35:35,611 | INFO     | ***************************************
[2025-11-21 11:36:28] 2025-11-21 16:35:35,619 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 11:36:28] 2025-11-21 16:35:35,619 | INFO     | ***************************************
[2025-11-21 11:36:28] 2025-11-21 16:35:35,619 | INFO     | 
[2025-11-21 11:36:28] 2025-11-21 16:35:35,621 | INFO     | architecture information:
[2025-11-21 11:36:28] 2025-11-21 16:35:35,625 | INFO     | executing command: cat /etc/os-release
[2025-11-21 11:36:28] 2025-11-21 16:35:35,647 | INFO     | cat /etc/os-release:
[2025-11-21 11:36:28] NAME="CentOS Linux"
[2025-11-21 11:36:28] VERSION="7 (Core)"
[2025-11-21 11:36:28] ID="centos"
[2025-11-21 11:36:28] ID_LIKE="rhel fedora"
[2025-11-21 11:36:28] VERSION_ID="7"
[2025-11-21 11:36:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 11:36:28] ANSI_COLOR="0;31"
[2025-11-21 11:36:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 11:36:28] HOME_URL="https://www.centos.org/"
[2025-11-21 11:36:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 11:36:28] 
[2025-11-21 11:36:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 11:36:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 11:36:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 11:36:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 11:36:28] 
[2025-11-21 11:36:28] 2025-11-21 16:35:35,648 | INFO     | ***************************************
[2025-11-21 11:36:28] 2025-11-21 16:35:36,152 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-21 11:36:28] 2025-11-21 16:35:36,205 | INFO     | sufficient remaining disk space (48035266560 B)
[2025-11-21 11:36:28] 2025-11-21 16:35:36,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 11:36:28] 2025-11-21 16:35:36,206 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 11:36:28] 2025-11-21 16:35:36,206 | INFO     | update_server=False
[2025-11-21 11:36:28] 2025-11-21 16:35:36,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 11:36:28] 2025-11-21 16:35:36,229 | INFO     | all job control threads have been joined
[2025-11-21 11:36:28] 2025-11-21 16:35:36,251 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 11:36:28] 2025-11-21 16:35:36,251 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 11:36:28] 2025-11-21 16:35:36,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:36:28] 2025-11-21 16:35:36,252 | INFO     | will abort loop
[2025-11-21 11:36:28] 2025-11-21 16:35:36,415 | INFO     | all data control threads have been joined
[2025-11-21 11:36:28] 2025-11-21 16:35:37,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 11:36:28] 2025-11-21 16:35:37,067 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 11:36:28] 2025-11-21 16:35:37,159 | INFO     | all payload control threads have been joined
[2025-11-21 11:36:28] 2025-11-21 16:35:37,212 | INFO     | [job] retrieve thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:37,235 | INFO     | [job] control thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:37,259 | INFO     | [job] job monitor thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:37,294 | INFO     | [job] validate thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:37,334 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:37,421 | INFO     | [data] control thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:37,447 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:37,695 | INFO     | [data] copytool_in thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:38,165 | INFO     | [payload] control thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:38,175 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:38,440 | INFO     | [payload] validate_post thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:38,562 | INFO     | [payload] failed_post thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:38,651 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:39,074 | INFO     | [data] copytool_out thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:39,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:36:28] 2025-11-21 16:35:40,141 | INFO     | [job] queue monitor thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:35:41,039 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 11:36:28] 2025-11-21 16:36:05,619 | INFO     | PID=269835 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 11:36:28] 2025-11-21 16:36:05,620 | INFO     | .. there are 7 such processes running
[2025-11-21 11:36:28] 2025-11-21 16:36:05,620 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 11:36:28] 2025-11-21 16:36:05,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 11:36:28] 2025-11-21 16:36:05,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 11:36:28] 2025-11-21 16:36:22,462 | INFO     | [monitor] cgroup control has ended
[2025-11-21 11:36:28] 2025-11-21 16:36:23,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622382839616)>', '<ExcThread(monitor, started 140621876532992)>']
[2025-11-21 11:36:28] 2025-11-21 16:36:23,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 11:36:28] 2025-11-21 16:36:23,730 | INFO     | [monitor] control thread has ended
[2025-11-21 11:36:28] 2025-11-21 16:36:28,216 | INFO     | all workflow threads have been joined
[2025-11-21 11:36:28] 2025-11-21 16:36:28,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 11:36:28] 2025-11-21 16:36:28,217 | INFO     | traces error code: 0
[2025-11-21 11:36:28] 2025-11-21 16:36:28,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 11:36:28] 2025-11-21 16:36:28,418 [wrapper] ==== pilot stdout END ====
[2025-11-21 11:36:28] 2025-11-21 16:36:28,443 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 11:36:28] 2025-11-21 16:36:28,445 [wrapper] pilotpid: 269835
[2025-11-21 11:36:28] 2025-11-21 16:36:28,450 [wrapper] Pilot exit status: 0
[2025-11-21 11:36:28] 2025-11-21 16:36:28,474 [wrapper] pandaids: 6893874545
[2025-11-21 11:36:28] 2025-11-21 16:36:28,565 [wrapper] cleanup supervisor_pilot 1201675 269836
[2025-11-21 11:36:28] 2025-11-21 16:36:28,568 [wrapper] Test setup, not cleaning
[2025-11-21 11:36:28] 2025-11-21 16:36:28,570 [wrapper] apfmon messages muted
[2025-11-21 11:36:28] 2025-11-21 16:36:28,573 [wrapper] ==== wrapper stdout END ====
[2025-11-21 11:36:28] 2025-11-21 16:36:28,580 [wrapper] ==== wrapper stderr END ====
[2025-11-21 11:36:28]  *** Error codes and diagnostics ***
[2025-11-21 11:36:28]     "exeErrorCode": 0,
[2025-11-21 11:36:28]     "exeErrorDiag": "",
[2025-11-21 11:36:28]     "pilotErrorCode": 0,
[2025-11-21 11:36:28]     "pilotErrorDiag": "",
[2025-11-21 11:36:28]  *** Listing of results directory ***
[2025-11-21 11:36:28] total 1305856
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 11:08 pilot3.tar.gz
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 11:12 queuedata.json
[2025-11-21 11:36:28] -rwx------. 1 boincer umatlas     36292 Nov 20 11:13 runpilot2-wrapper.sh
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 11:36:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:28 run_atlas
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:28 job.xml
[2025-11-21 11:36:28] -rw-r--r--. 2 boincer umatlas 408666791 Nov 21 00:28 EVNT.47493127._000726.pool.root.1
[2025-11-21 11:36:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:28 start_atlas.sh
[2025-11-21 11:36:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:28 shared
[2025-11-21 11:36:28] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 00:28 input.tar.gz
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:28 boinc_lockfile
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 00:28 pandaJob.out
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas        57 Nov 21 00:28 setup.sh.local
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas    989817 Nov 21 00:28 agis_schedconf.cvmfs.json
[2025-11-21 11:36:28] drwx------. 5 boincer umatlas      4096 Nov 21 00:28 pilot3
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas       533 Nov 21 11:24 boinc_task_state.xml
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas 909469311 Nov 21 11:34 HITS.47523449._007252.pool.root.1
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas        95 Nov 21 11:35 pilot_heartbeat.json
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas      1056 Nov 21 11:35 memory_monitor_summary.json
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas   1526164 Nov 21 11:35 agis_ddmendpoints.agis.ALL.json
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas   1926577 Nov 21 11:35 log.47523449._007252.job.log.tgz.1
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas      8627 Nov 21 11:35 heartbeat.json
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas      6660 Nov 21 11:36 init_data.xml
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 11:36 boinc_mmap_file
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas        29 Nov 21 11:36 wrapper_checkpoint.txt
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas      5008 Nov 21 11:36 pilotlog.txt
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas   5637838 Nov 21 11:36 log.47523449._007252.job.log.1
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas       353 Nov 21 11:36 output.list
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas       620 Nov 21 11:36 runtime_log
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas   7587840 Nov 21 11:36 result.tar.gz
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 11:36 runtime_log.err
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas       661 Nov 21 11:36 kQ5NDm3SMg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjHIKDmZjlv8m.diag
[2025-11-21 11:36:28] -rw-r--r--. 1 boincer umatlas     21287 Nov 21 11:36 stderr.txt
[2025-11-21 11:36:28] HITS file was successfully produced:
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas 909469311 Nov 21 11:34 shared/HITS.pool.root.1
[2025-11-21 11:36:28]  *** Contents of shared directory: ***
[2025-11-21 11:36:28] total 1295260
[2025-11-21 11:36:28] -rw-r--r--. 2 boincer umatlas 408666791 Nov 21 00:28 ATLAS.root_0
[2025-11-21 11:36:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:28 start_atlas.sh
[2025-11-21 11:36:28] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 00:28 input.tar.gz
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas 909469311 Nov 21 11:34 HITS.pool.root.1
[2025-11-21 11:36:28] -rw-------. 1 boincer umatlas   7587840 Nov 21 11:36 result.tar.gz
11:36:29 (266134): run_atlas exited; CPU time 293389.801582
11:36:29 (266134): called boinc_finish(0)

</stderr_txt>
]]>

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