Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:23:09 (28404): wrapper (7.7.26015): starting
02:23:09 (28404): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 02:23:09] Arguments: --nthreads 8
[2025-11-24 02:23:09] Threads: 8
[2025-11-24 02:23:09] Checking for CVMFS
[2025-11-24 02:23:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:23:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:23:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:23:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:23:12] 2.11.2.0 32728 281651 144164 153228 0 62 19200628 25165825 4632 130560 2 138728507 99.889 75272893 3090 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 02:23:12] CVMFS is ok
[2025-11-24 02:23:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:23:12] Checking for apptainer binary...
[2025-11-24 02:23:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:23:12] Running /usr/bin/apptainer --version
[2025-11-24 02:23:12] apptainer version 1.3.2-1.el7
[2025-11-24 02:23:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:23:18] cg-vwn337.simple-grid.lan
[2025-11-24 02:23:18] apptainer works
[2025-11-24 02:23:18] Set ATHENA_PROC_NUMBER=8
[2025-11-24 02:23:18] Set ATHENA_CORE_NUMBER=8
[2025-11-24 02:23:19] Starting ATLAS job with PandaID=6893874784
[2025-11-24 02:23:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:07:26]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:07:26] 2025-11-24 23:06:20,312 | INFO     | .. there are 2 such processes running
[2025-11-25 00:07:26] 2025-11-24 23:06:21,208 | INFO     | monitor loop #5237: job 0:6893874784 is in state 'finished'
[2025-11-25 00:07:26] 2025-11-24 23:06:21,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:07:26] 2025-11-24 23:06:21,314 | INFO     | time since job start (77960s) is within the limit (172800.0s)
[2025-11-25 00:07:26] 2025-11-24 23:06:23,321 | INFO     | time since job start (77962s) is within the limit (172800.0s)
[2025-11-25 00:07:26] 2025-11-24 23:06:23,714 | INFO     | monitor loop #5238: job 0:6893874784 is in state 'finished'
[2025-11-25 00:07:26] 2025-11-24 23:06:23,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:07:26] 2025-11-24 23:06:25,328 | INFO     | time since job start (77964s) is within the limit (172800.0s)
[2025-11-25 00:07:26] 2025-11-24 23:06:26,217 | INFO     | monitor loop #5239: job 0:6893874784 is in state 'finished'
[2025-11-25 00:07:26] 2025-11-24 23:06:26,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:07:26] 2025-11-24 23:06:27,335 | INFO     | time since job start (77966s) is within the limit (172800.0s)
[2025-11-25 00:07:26] 2025-11-24 23:06:28,727 | INFO     | monitor loop #5240: job 0:6893874784 is in state 'finished'
[2025-11-25 00:07:26] 2025-11-24 23:06:28,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:07:26] 2025-11-24 23:06:29,342 | INFO     | time since job start (77968s) is within the limit (172800.0s)
[2025-11-25 00:07:26] 2025-11-24 23:06:29,347 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 00:07:26] 2025-11-24 23:06:29,348 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 00:07:26] 2025-11-24 23:06:29,350 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6893874784/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:07:26] 2025-11-24 23:06:29,351 | INFO     | extracted standard info from prmon json
[2025-11-25 00:07:26] 2025-11-24 23:06:29,351 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:07:26] 2025-11-24 23:06:29,351 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:07:26] 2025-11-24 23:06:29,375 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:07:26] 2025-11-24 23:06:29,377 | INFO     | sum of square deviations: 632172725795.8613
[2025-11-25 00:07:26] 2025-11-24 23:06:29,422 | INFO     | sum of deviations: 3168095616973.4395
[2025-11-25 00:07:26] 2025-11-24 23:06:29,423 | INFO     | mean x: 1763986799.5299685
[2025-11-25 00:07:26] 2025-11-24 23:06:29,423 | INFO     | mean y: 2815502.5276025236
[2025-11-25 00:07:26] 2025-11-24 23:06:29,423 | INFO     | intersect: -8837298314.395443
[2025-11-25 00:07:26] 2025-11-24 23:06:29,425 | INFO     | chi2: 32.11297785210965
[2025-11-25 00:07:26] 2025-11-24 23:06:29,427 | INFO     | sum of square deviations: 624724184455.5363
[2025-11-25 00:07:26] 2025-11-24 23:06:29,465 | INFO     | sum of deviations: 3579288188783.332
[2025-11-25 00:07:26] 2025-11-24 23:06:29,465 | INFO     | mean x: 1763986647.034046
[2025-11-25 00:07:26] 2025-11-24 23:06:29,466 | INFO     | mean y: 2823919.8527315916
[2025-11-25 00:07:26] 2025-11-24 23:06:29,466 | INFO     | intersect: -10103742670.654938
[2025-11-25 00:07:26] 2025-11-24 23:06:29,467 | INFO     | chi2: 28.891473472610205
[2025-11-25 00:07:26] 2025-11-24 23:06:29,467 | INFO     | current chi2=28.891473472610205 (change=10.031783394039277 %)
[2025-11-25 00:07:26] 2025-11-24 23:06:29,467 | INFO     | right removable region: 1262
[2025-11-25 00:07:26] 2025-11-24 23:06:29,469 | INFO     | sum of square deviations: 624723387795.5358
[2025-11-25 00:07:26] 2025-11-24 23:06:29,509 | INFO     | sum of deviations: 2624976241381.9297
[2025-11-25 00:07:26] 2025-11-24 23:06:29,509 | INFO     | mean x: 1763986952.034046
[2025-11-25 00:07:26] 2025-11-24 23:06:29,509 | INFO     | mean y: 2826621.3737133807
[2025-11-25 00:07:26] 2025-11-24 23:06:29,510 | INFO     | intersect: -7409131902.440312
[2025-11-25 00:07:26] 2025-11-24 23:06:29,511 | INFO     | chi2: 27.006876390822928
[2025-11-25 00:07:26] 2025-11-24 23:06:29,511 | INFO     | current chi2=27.006876390822928 (change=15.900429679246578 %)
[2025-11-25 00:07:26] 2025-11-24 23:06:29,512 | INFO     | left removable region: 10
[2025-11-25 00:07:26] 2025-11-24 23:06:29,513 | INFO     | sum of square deviations: 608542256150.6722
[2025-11-25 00:07:26] 2025-11-24 23:06:29,568 | INFO     | sum of deviations: 2641578813413.4165
[2025-11-25 00:07:26] 2025-11-24 23:06:29,568 | INFO     | mean x: 1763986921.5431309
[2025-11-25 00:07:26] 2025-11-24 23:06:29,568 | INFO     | mean y: 2847171.2979233228
[2025-11-25 00:07:26] 2025-11-24 23:06:29,568 | INFO     | intersect: -7654321138.691985
[2025-11-25 00:07:26] 2025-11-24 23:06:29,570 | INFO     | chi2: 18.964562781755696
[2025-11-25 00:07:26] 2025-11-24 23:06:29,570 | INFO     | current memory leak: 4.34 B/s (using 1252 data points, chi2=18.96)
[2025-11-25 00:07:26] 2025-11-24 23:06:29,572 | INFO     | could have reported an average CPU frequency of 1999 MHz (43 samples)
[2025-11-25 00:07:26] 2025-11-24 23:06:29,572 | INFO     | ..............................
[2025-11-25 00:07:26] 2025-11-24 23:06:29,572 | INFO     | . Timing measurements:
[2025-11-25 00:07:26] 2025-11-24 23:06:29,573 | INFO     | . get job = 0 s
[2025-11-25 00:07:26] 2025-11-24 23:06:29,573 | INFO     | . initial setup = 10 s
[2025-11-25 00:07:26] 2025-11-24 23:06:29,573 | INFO     | . payload setup = 174 s
[2025-11-25 00:07:26] 2025-11-24 23:06:29,573 | INFO     | . stage-in = 0 s
[2025-11-25 00:07:26] 2025-11-24 23:06:29,573 | INFO     | . payload execution = 77483 s
[2025-11-25 00:07:26] 2025-11-24 23:06:29,573 | INFO     | . stage-out = 6 s
[2025-11-25 00:07:26] 2025-11-24 23:06:29,573 | INFO     | . log creation = 2 s
[2025-11-25 00:07:26] 2025-11-24 23:06:29,573 | INFO     | ..............................
[2025-11-25 00:07:26] 2025-11-24 23:06:29,693 | INFO     | 
[2025-11-25 00:07:26] 2025-11-24 23:06:29,693 | INFO     | job summary report
[2025-11-25 00:07:26] 2025-11-24 23:06:29,693 | INFO     | --------------------------------------------------
[2025-11-25 00:07:26] 2025-11-24 23:06:29,693 | INFO     | PanDA job id: 6893874784
[2025-11-25 00:07:26] 2025-11-24 23:06:29,693 | INFO     | task id: 47523449
[2025-11-25 00:07:26] 2025-11-24 23:06:29,693 | INFO     | errors: (none)
[2025-11-25 00:07:26] 2025-11-24 23:06:29,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:07:26] 2025-11-24 23:06:29,693 | INFO     | pilot state: finished 
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | transexitcode: 0
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | exeerrorcode: 0
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | exeerrordiag: 
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | exitcode: 0
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | exitmsg: OK
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | cpuconsumptiontime: 349398 s
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | nevents: 1000
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | neventsw: 0
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | pid: 6410
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | pgrp: 6410
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | corecount: 8
[2025-11-25 00:07:26] 2025-11-24 23:06:29,694 | INFO     | event service: False
[2025-11-25 00:07:26] 2025-11-24 23:06:29,695 | INFO     | sizes: {0: 2297928, 1: 2298613, 2: 2298812, 13: 2298812, 24: 2298868, 35: 2298896, 46: 2299052, 56: 2299080, 67: 2299108, 78: 2299136, 89: 2299192, 96: 2299762, 99
[2025-11-25 00:07:26] 2025-11-24 23:06:29,695 | INFO     | --------------------------------------------------
[2025-11-25 00:07:26] 2025-11-24 23:06:29,695 | INFO     | 
[2025-11-25 00:07:26] 2025-11-24 23:06:29,695 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-25 00:07:26] 2025-11-24 23:06:30,140 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,140 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,140 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,140 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,141 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,142 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:07:26] 2025-11-24 23:06:30,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,142 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:07:26] 2025-11-24 23:06:30,142 | INFO     | job 6893874784 has completed (purged errors)
[2025-11-25 00:07:26] 2025-11-24 23:06:30,142 | INFO     | overall cleanup function is called
[2025-11-25 00:07:26] 2025-11-24 23:06:31,158 | INFO     | --- collectZombieJob: --- 10, [6410]
[2025-11-25 00:07:26] 2025-11-24 23:06:31,159 | INFO     | zombie collector waiting for pid 6410
[2025-11-25 00:07:26] 2025-11-24 23:06:31,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:07:26] 2025-11-24 23:06:31,159 | INFO     | collected zombie processes
[2025-11-25 00:07:26] 2025-11-24 23:06:31,159 | INFO     | will attempt to kill all subprocesses of pid=6410
[2025-11-25 00:07:26] 2025-11-24 23:06:31,223 | INFO     | process IDs to be killed: [6410] (in reverse order)
[2025-11-25 00:07:26] 2025-11-24 23:06:32,317 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:07:26] 2025-11-24 23:06:32,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:07:26] 2025-11-24 23:06:32,319 | INFO     | did not find any defunct processes belonging to 6410
[2025-11-25 00:07:26] 2025-11-24 23:06:32,321 | INFO     | did not find any defunct processes belonging to 6410
[2025-11-25 00:07:26] 2025-11-24 23:06:32,323 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:07:26] 2025-11-24 23:06:32,323 | INFO     | ready for new job
[2025-11-25 00:07:26] 2025-11-24 23:06:32,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:07:26] 2025-11-24 23:06:32,328 | INFO     | ***************************************
[2025-11-25 00:07:26] 2025-11-24 23:06:32,328 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:07:26] 2025-11-24 23:06:32,328 | INFO     | ***************************************
[2025-11-25 00:07:26] 2025-11-24 23:06:32,328 | INFO     | 
[2025-11-25 00:07:26] 2025-11-24 23:06:32,329 | INFO     | pilot is running in a VM
[2025-11-25 00:07:26] 2025-11-24 23:06:32,329 | INFO     | architecture information:
[2025-11-25 00:07:26] 2025-11-24 23:06:32,330 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:07:26] 2025-11-24 23:06:32,604 | INFO     | cat /etc/os-release:
[2025-11-25 00:07:26] NAME="CentOS Linux"
[2025-11-25 00:07:26] VERSION="7 (Core)"
[2025-11-25 00:07:26] ID="centos"
[2025-11-25 00:07:26] ID_LIKE="rhel fedora"
[2025-11-25 00:07:26] VERSION_ID="7"
[2025-11-25 00:07:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:07:26] ANSI_COLOR="0;31"
[2025-11-25 00:07:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:07:26] HOME_URL="https://www.centos.org/"
[2025-11-25 00:07:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:07:26] 
[2025-11-25 00:07:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:07:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:07:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:07:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:07:26] 
[2025-11-25 00:07:26] 2025-11-24 23:06:32,604 | INFO     | ***************************************
[2025-11-25 00:07:26] 2025-11-24 23:06:33,108 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-25 00:07:26] 2025-11-24 23:06:33,343 | INFO     | sufficient remaining disk space (493504954368 B)
[2025-11-25 00:07:26] 2025-11-24 23:06:33,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:07:26] 2025-11-24 23:06:33,344 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:07:26] 2025-11-24 23:06:33,344 | INFO     | update_server=False
[2025-11-25 00:07:26] 2025-11-24 23:06:33,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:07:26] 2025-11-24 23:06:33,697 | INFO     | all data control threads have been joined
[2025-11-25 00:07:26] 2025-11-24 23:06:33,740 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 00:07:26] 2025-11-24 23:06:33,741 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 00:07:26] 2025-11-24 23:06:33,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:07:26] 2025-11-24 23:06:33,741 | INFO     | will abort loop
[2025-11-25 00:07:26] 2025-11-24 23:06:34,350 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:34,356 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:34,406 | INFO     | [job] validate thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:34,704 | INFO     | [data] control thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:34,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:07:26] 2025-11-24 23:06:34,747 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:34,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:07:26] 2025-11-24 23:06:34,792 | INFO     | all payload control threads have been joined
[2025-11-25 00:07:26] 2025-11-24 23:06:34,844 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:34,917 | INFO     | all job control threads have been joined
[2025-11-25 00:07:26] 2025-11-24 23:06:35,393 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:35,611 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:35,680 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:35,714 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:35,726 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:35,795 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:35,799 | INFO     | [payload] control thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:35,924 | INFO     | [job] control thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:36,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:07:26] 2025-11-24 23:06:36,757 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:06:40,029 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:07:26] 2025-11-24 23:07:02,454 | INFO     | PID=32178 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 00:07:26] 2025-11-24 23:07:02,454 | INFO     | .. there are 2 such processes running
[2025-11-25 00:07:26] 2025-11-24 23:07:02,454 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:07:26] 2025-11-24 23:07:02,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:07:26] 2025-11-24 23:07:02,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:07:26] 2025-11-24 23:07:16,230 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:07:26] 2025-11-24 23:07:16,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038371088192)>', '<ExcThread(monitor, started 140037794551552)>']
[2025-11-25 00:07:26] 2025-11-24 23:07:16,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:07:26] 2025-11-24 23:07:16,539 | INFO     | [monitor] control thread has ended
[2025-11-25 00:07:26] 2025-11-24 23:07:21,477 | INFO     | all workflow threads have been joined
[2025-11-25 00:07:26] 2025-11-24 23:07:21,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:07:26] 2025-11-24 23:07:21,478 | INFO     | traces error code: 0
[2025-11-25 00:07:26] 2025-11-24 23:07:21,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:07:26] 2025-11-24 23:07:21,802 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:07:26] 2025-11-24 23:07:21,872 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:07:26] 2025-11-24 23:07:21,965 [wrapper] pilotpid: 32178
[2025-11-25 00:07:26] 2025-11-24 23:07:22,083 [wrapper] Pilot exit status: 0
[2025-11-25 00:07:26] 2025-11-24 23:07:22,537 [wrapper] pandaids: 6893874784
[2025-11-25 00:07:26] 2025-11-24 23:07:23,213 [wrapper] cleanup supervisor_pilot 24188 32179
[2025-11-25 00:07:26] 2025-11-24 23:07:23,303 [wrapper] Test setup, not cleaning
[2025-11-25 00:07:26] 2025-11-24 23:07:23,452 [wrapper] apfmon messages muted
[2025-11-25 00:07:26] 2025-11-24 23:07:23,501 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:07:26] 2025-11-24 23:07:23,613 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:07:26]  *** Error codes and diagnostics ***
[2025-11-25 00:07:26]     "exeErrorCode": 0,
[2025-11-25 00:07:26]     "exeErrorDiag": "",
[2025-11-25 00:07:26]     "pilotErrorCode": 0,
[2025-11-25 00:07:26]     "pilotErrorDiag": "",
[2025-11-25 00:07:26]  *** Listing of results directory ***
[2025-11-25 00:07:26] total 1347236
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc    576529 Nov 20 17:08 pilot3.tar.gz
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc      5112 Nov 20 17:28 queuedata.json
[2025-11-25 00:07:26] -rwx------. 1 boinc boinc     36292 Nov 20 17:28 runpilot2-wrapper.sh
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc       100 Nov 24 02:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:07:26] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 02:23 run_atlas
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc       105 Nov 24 02:23 job.xml
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc      6391 Nov 24 02:23 init_data.xml
[2025-11-25 00:07:26] -rw-r--r--. 2 boinc boinc 412882996 Nov 24 02:23 EVNT.47493127._000737.pool.root.1
[2025-11-25 00:07:26] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:23 start_atlas.sh
[2025-11-25 00:07:26] drwxrwx--x. 2 boinc boinc        68 Nov 24 02:23 shared
[2025-11-25 00:07:26] -rw-r--r--. 2 boinc boinc    590105 Nov 24 02:23 input.tar.gz
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc         0 Nov 24 02:23 boinc_lockfile
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc      2785 Nov 24 02:23 pandaJob.out
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc    989786 Nov 24 02:26 agis_schedconf.cvmfs.json
[2025-11-25 00:07:26] drwx------. 5 boinc boinc      4096 Nov 24 02:27 pilot3
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc       533 Nov 24 23:35 boinc_task_state.xml
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc 937243809 Nov 25 00:03 HITS.47523449._007363.pool.root.1
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc      1033 Nov 25 00:04 memory_monitor_summary.json
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc   1516227 Nov 25 00:04 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc   2398227 Nov 25 00:04 log.47523449._007363.job.log.tgz.1
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc      8643 Nov 25 00:06 heartbeat.json
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc        95 Nov 25 00:06 pilot_heartbeat.json
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc      8192 Nov 25 00:06 boinc_mmap_file
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc        29 Nov 25 00:06 wrapper_checkpoint.txt
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc      5070 Nov 25 00:07 pilotlog.txt
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc  10367305 Nov 25 00:07 log.47523449._007363.job.log.1
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc       353 Nov 25 00:07 output.list
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc       620 Nov 25 00:07 runtime_log
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc  12789760 Nov 25 00:07 result.tar.gz
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc      8817 Nov 25 00:07 runtime_log.err
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc       662 Nov 25 00:07 lUaLDmehMg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8IIKDmFK4nFn.diag
[2025-11-25 00:07:26] -rw-r--r--. 1 boinc boinc     21387 Nov 25 00:07 stderr.txt
[2025-11-25 00:07:26] HITS file was successfully produced:
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc 937243809 Nov 25 00:03 shared/HITS.pool.root.1
[2025-11-25 00:07:26]  *** Contents of shared directory: ***
[2025-11-25 00:07:26] total 1331576
[2025-11-25 00:07:26] -rw-r--r--. 2 boinc boinc 412882996 Nov 24 02:23 ATLAS.root_0
[2025-11-25 00:07:26] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:23 start_atlas.sh
[2025-11-25 00:07:26] -rw-r--r--. 2 boinc boinc    590105 Nov 24 02:23 input.tar.gz
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc 937243809 Nov 25 00:03 HITS.pool.root.1
[2025-11-25 00:07:26] -rw-------. 1 boinc boinc  12789760 Nov 25 00:07 result.tar.gz
00:07:28 (28404): run_atlas exited; CPU time 349641.106617
00:07:28 (28404): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN