Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:07:31 (30311): wrapper (7.7.26015): starting
00:07:31 (30311): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 00:07:31] Arguments: --nthreads 8
[2025-11-21 00:07:31] Threads: 8
[2025-11-21 00:07:31] Checking for CVMFS
[2025-11-21 00:07:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:07:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:07:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:07:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:07:31] 2.11.2.0 2934 169183 82316 153108 1 81 19681223 20275201 1 130560 1 63949404 99.957 7311522 22279 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:07:31] CVMFS is ok
[2025-11-21 00:07:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:07:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:07:31] Further information can be found at the LHC@home message board.
[2025-11-21 00:07:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:07:31] Checking for apptainer binary...
[2025-11-21 00:07:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:07:31] Running /usr/bin/apptainer --version
[2025-11-21 00:07:31] apptainer version 1.3.2-1.el7
[2025-11-21 00:07:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:07:33] c-204-33.aglt2.org
[2025-11-21 00:07:33] apptainer works
[2025-11-21 00:07:33] Set ATHENA_PROC_NUMBER=8
[2025-11-21 00:07:33] Set ATHENA_CORE_NUMBER=8
[2025-11-21 00:07:33] Starting ATLAS job with PandaID=6893874851
[2025-11-21 00:07:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 12:48:14]  *** The last 200 lines of the pilot log: ***
[2025-11-21 12:48:14] 2025-11-21 17:47:38,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 12:48:14] 2025-11-21 17:47:40,661 | INFO     | time since job start (45591s) is within the limit (172800.0s)
[2025-11-21 12:48:14] 2025-11-21 17:47:41,277 | INFO     | monitor loop #3358: job 0:6893874851 is in state 'finished'
[2025-11-21 12:48:14] 2025-11-21 17:47:41,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 12:48:14] 2025-11-21 17:47:41,562 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 12:48:14] 2025-11-21 17:47:41,566 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-21 12:48:14] 2025-11-21 17:47:41,567 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893874851/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 12:48:14] 2025-11-21 17:47:41,568 | INFO     | extracted standard info from prmon json
[2025-11-21 12:48:14] 2025-11-21 17:47:41,568 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 12:48:14] 2025-11-21 17:47:41,568 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 12:48:14] 2025-11-21 17:47:41,580 | INFO     | fitting pss+swap vs Time
[2025-11-21 12:48:14] 2025-11-21 17:47:41,581 | INFO     | sum of square deviations: 129252744270.67459
[2025-11-21 12:48:14] 2025-11-21 17:47:41,593 | INFO     | sum of deviations: 960737650384.0723
[2025-11-21 12:48:14] 2025-11-21 17:47:41,593 | INFO     | mean x: 1763724454.51004
[2025-11-21 12:48:14] 2025-11-21 17:47:41,593 | INFO     | mean y: 2862741.2570281127
[2025-11-21 12:48:14] 2025-11-21 17:47:41,593 | INFO     | intersect: -13106928450.506126
[2025-11-21 12:48:14] 2025-11-21 17:47:41,594 | INFO     | chi2: 5.464112339916238
[2025-11-21 12:48:14] 2025-11-21 17:47:41,595 | INFO     | sum of square deviations: 126674756321.8651
[2025-11-21 12:48:14] 2025-11-21 17:47:41,607 | INFO     | sum of deviations: 1180097330951.4458
[2025-11-21 12:48:14] 2025-11-21 17:47:41,607 | INFO     | mean x: 1763724302.013477
[2025-11-21 12:48:14] 2025-11-21 17:47:41,607 | INFO     | mean y: 2875712.0552560645
[2025-11-21 12:48:14] 2025-11-21 17:47:41,607 | INFO     | intersect: -16427914460.943443
[2025-11-21 12:48:14] 2025-11-21 17:47:41,608 | INFO     | chi2: 2.9259034256108514
[2025-11-21 12:48:14] 2025-11-21 17:47:41,608 | INFO     | current chi2=2.9259034256108514 (change=46.4523559620719 %)
[2025-11-21 12:48:14] 2025-11-21 17:47:41,609 | INFO     | sum of square deviations: 124131280648.03827
[2025-11-21 12:48:14] 2025-11-21 17:47:41,623 | INFO     | sum of deviations: 1237277445221.2236
[2025-11-21 12:48:14] 2025-11-21 17:47:41,623 | INFO     | mean x: 1763724149.5169606
[2025-11-21 12:48:14] 2025-11-21 17:47:41,623 | INFO     | mean y: 2879127.7421981003
[2025-11-21 12:48:14] 2025-11-21 17:47:41,623 | INFO     | intersect: -17577025779.359936
[2025-11-21 12:48:14] 2025-11-21 17:47:41,624 | INFO     | chi2: 2.530580746241555
[2025-11-21 12:48:14] 2025-11-21 17:47:41,624 | INFO     | current chi2=2.530580746241555 (change=13.511132182592926 %)
[2025-11-21 12:48:14] 2025-11-21 17:47:41,624 | INFO     | right removable region: 736
[2025-11-21 12:48:14] 2025-11-21 17:47:41,625 | INFO     | sum of square deviations: 126674523911.86516
[2025-11-21 12:48:14] 2025-11-21 17:47:41,639 | INFO     | sum of deviations: 757704905866.9005
[2025-11-21 12:48:14] 2025-11-21 17:47:41,639 | INFO     | mean x: 1763724607.013477
[2025-11-21 12:48:14] 2025-11-21 17:47:41,639 | INFO     | mean y: 2874729.8099730457
[2025-11-21 12:48:14] 2025-11-21 17:47:41,639 | INFO     | intersect: -10546861287.055439
[2025-11-21 12:48:14] 2025-11-21 17:47:41,640 | INFO     | chi2: 3.1861466566501933
[2025-11-21 12:48:14] 2025-11-21 17:47:41,640 | INFO     | current chi2=3.1861466566501933 (change=41.68958362413473 %)
[2025-11-21 12:48:14] 2025-11-21 17:47:41,641 | INFO     | sum of square deviations: 124130951370.12743
[2025-11-21 12:48:14] 2025-11-21 17:47:41,652 | INFO     | sum of deviations: 699257487992.0891
[2025-11-21 12:48:14] 2025-11-21 17:47:41,652 | INFO     | mean x: 1763724759.51289
[2025-11-21 12:48:14] 2025-11-21 17:47:41,653 | INFO     | mean y: 2878232.2537313434
[2025-11-21 12:48:14] 2025-11-21 17:47:41,653 | INFO     | intersect: -9932578889.70975
[2025-11-21 12:48:14] 2025-11-21 17:47:41,654 | INFO     | chi2: 3.0948352730397186
[2025-11-21 12:48:14] 2025-11-21 17:47:41,654 | INFO     | current chi2=3.0948352730397186 (change=2.8658876520918324 %)
[2025-11-21 12:48:14] 2025-11-21 17:47:41,654 | INFO     | left removable region: 20
[2025-11-21 12:48:14] 2025-11-21 17:47:41,655 | INFO     | sum of square deviations: 113819646418.6858
[2025-11-21 12:48:14] 2025-11-21 17:47:41,665 | INFO     | sum of deviations: 894540463272.845
[2025-11-21 12:48:14] 2025-11-21 17:47:41,666 | INFO     | mean x: 1763724729.0209496
[2025-11-21 12:48:14] 2025-11-21 17:47:41,666 | INFO     | mean y: 2899810.6103351954
[2025-11-21 12:48:14] 2025-11-21 17:47:41,666 | INFO     | intersect: -13858706562.515404
[2025-11-21 12:48:14] 2025-11-21 17:47:41,667 | INFO     | chi2: 0.10084691793833185
[2025-11-21 12:48:14] 2025-11-21 17:47:41,667 | INFO     | current memory leak: 7.86 B/s (using 716 data points, chi2=0.10)
[2025-11-21 12:48:14] 2025-11-21 17:47:41,667 | INFO     | could have reported an average CPU frequency of 2158 MHz (28 samples)
[2025-11-21 12:48:14] 2025-11-21 17:47:41,668 | INFO     | ..............................
[2025-11-21 12:48:14] 2025-11-21 17:47:41,668 | INFO     | . Timing measurements:
[2025-11-21 12:48:14] 2025-11-21 17:47:41,668 | INFO     | . get job = 0 s
[2025-11-21 12:48:14] 2025-11-21 17:47:41,668 | INFO     | . initial setup = 2 s
[2025-11-21 12:48:14] 2025-11-21 17:47:41,668 | INFO     | . payload setup = 8 s
[2025-11-21 12:48:14] 2025-11-21 17:47:41,668 | INFO     | . stage-in = 0 s
[2025-11-21 12:48:14] 2025-11-21 17:47:41,668 | INFO     | . payload execution = 45550 s
[2025-11-21 12:48:14] 2025-11-21 17:47:41,668 | INFO     | . stage-out = 4 s
[2025-11-21 12:48:14] 2025-11-21 17:47:41,669 | INFO     | . log creation = 0 s
[2025-11-21 12:48:14] 2025-11-21 17:47:41,669 | INFO     | ..............................
[2025-11-21 12:48:14] 2025-11-21 17:47:42,200 | INFO     | 
[2025-11-21 12:48:14] 2025-11-21 17:47:42,201 | INFO     | job summary report
[2025-11-21 12:48:14] 2025-11-21 17:47:42,201 | INFO     | --------------------------------------------------
[2025-11-21 12:48:14] 2025-11-21 17:47:42,201 | INFO     | PanDA job id: 6893874851
[2025-11-21 12:48:14] 2025-11-21 17:47:42,201 | INFO     | task id: 47523449
[2025-11-21 12:48:14] 2025-11-21 17:47:42,202 | INFO     | errors: (none)
[2025-11-21 12:48:14] 2025-11-21 17:47:42,202 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 12:48:14] 2025-11-21 17:47:42,202 | INFO     | pilot state: finished 
[2025-11-21 12:48:14] 2025-11-21 17:47:42,202 | INFO     | transexitcode: 0
[2025-11-21 12:48:14] 2025-11-21 17:47:42,202 | INFO     | exeerrorcode: 0
[2025-11-21 12:48:14] 2025-11-21 17:47:42,202 | INFO     | exeerrordiag: 
[2025-11-21 12:48:14] 2025-11-21 17:47:42,203 | INFO     | exitcode: 0
[2025-11-21 12:48:14] 2025-11-21 17:47:42,203 | INFO     | exitmsg: OK
[2025-11-21 12:48:14] 2025-11-21 17:47:42,203 | INFO     | cpuconsumptiontime: 353136 s
[2025-11-21 12:48:14] 2025-11-21 17:47:42,203 | INFO     | nevents: 1000
[2025-11-21 12:48:14] 2025-11-21 17:47:42,203 | INFO     | neventsw: 0
[2025-11-21 12:48:14] 2025-11-21 17:47:42,203 | INFO     | pid: 8161
[2025-11-21 12:48:14] 2025-11-21 17:47:42,204 | INFO     | pgrp: 8161
[2025-11-21 12:48:14] 2025-11-21 17:47:42,204 | INFO     | corecount: 8
[2025-11-21 12:48:14] 2025-11-21 17:47:42,204 | INFO     | event service: False
[2025-11-21 12:48:14] 2025-11-21 17:47:42,204 | INFO     | sizes: {0: 2298528, 1: 2298727, 6: 2298989, 11: 2299017, 45563: 2345191, 45569: 2354369, 45575: 2354559}
[2025-11-21 12:48:14] 2025-11-21 17:47:42,204 | INFO     | --------------------------------------------------
[2025-11-21 12:48:14] 2025-11-21 17:47:42,205 | INFO     | 
[2025-11-21 12:48:14] 2025-11-21 17:47:42,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 12:48:14] 2025-11-21 17:47:42,230 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 12:48:14] 2025-11-21 17:47:42,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,234 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 12:48:14] 2025-11-21 17:47:42,235 | INFO     | job 6893874851 has completed (purged errors)
[2025-11-21 12:48:14] 2025-11-21 17:47:42,235 | INFO     | overall cleanup function is called
[2025-11-21 12:48:14] 2025-11-21 17:47:43,250 | INFO     | --- collectZombieJob: --- 10, [8161]
[2025-11-21 12:48:14] 2025-11-21 17:47:43,251 | INFO     | zombie collector waiting for pid 8161
[2025-11-21 12:48:14] 2025-11-21 17:47:43,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 12:48:14] 2025-11-21 17:47:43,251 | INFO     | collected zombie processes
[2025-11-21 12:48:14] 2025-11-21 17:47:43,251 | INFO     | will attempt to kill all subprocesses of pid=8161
[2025-11-21 12:48:14] 2025-11-21 17:47:43,340 | INFO     | process IDs to be killed: [8161] (in reverse order)
[2025-11-21 12:48:14] 2025-11-21 17:47:43,401 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 12:48:14] 2025-11-21 17:47:43,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 12:48:14] 2025-11-21 17:47:43,405 | INFO     | did not find any defunct processes belonging to 8161
[2025-11-21 12:48:14] 2025-11-21 17:47:43,409 | INFO     | did not find any defunct processes belonging to 8161
[2025-11-21 12:48:14] 2025-11-21 17:47:43,412 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 12:48:14] 2025-11-21 17:47:43,412 | INFO     | ready for new job
[2025-11-21 12:48:14] 2025-11-21 17:47:43,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 12:48:14] 2025-11-21 17:47:43,416 | INFO     | ***************************************
[2025-11-21 12:48:14] 2025-11-21 17:47:43,416 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 12:48:14] 2025-11-21 17:47:43,417 | INFO     | ***************************************
[2025-11-21 12:48:14] 2025-11-21 17:47:43,417 | INFO     | 
[2025-11-21 12:48:14] 2025-11-21 17:47:43,417 | INFO     | architecture information:
[2025-11-21 12:48:14] 2025-11-21 17:47:43,418 | INFO     | executing command: cat /etc/os-release
[2025-11-21 12:48:14] 2025-11-21 17:47:43,435 | INFO     | cat /etc/os-release:
[2025-11-21 12:48:14] NAME="CentOS Linux"
[2025-11-21 12:48:14] VERSION="7 (Core)"
[2025-11-21 12:48:14] ID="centos"
[2025-11-21 12:48:14] ID_LIKE="rhel fedora"
[2025-11-21 12:48:14] VERSION_ID="7"
[2025-11-21 12:48:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 12:48:14] ANSI_COLOR="0;31"
[2025-11-21 12:48:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 12:48:14] HOME_URL="https://www.centos.org/"
[2025-11-21 12:48:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 12:48:14] 
[2025-11-21 12:48:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 12:48:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 12:48:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 12:48:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 12:48:14] 
[2025-11-21 12:48:14] 2025-11-21 17:47:43,436 | INFO     | ***************************************
[2025-11-21 12:48:14] 2025-11-21 17:47:43,939 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 12:48:14] 2025-11-21 17:47:43,956 | INFO     | sufficient remaining disk space (17467179008 B)
[2025-11-21 12:48:14] 2025-11-21 17:47:43,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 12:48:14] 2025-11-21 17:47:43,957 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 12:48:14] 2025-11-21 17:47:43,957 | INFO     | update_server=False
[2025-11-21 12:48:14] 2025-11-21 17:47:43,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 12:48:14] 2025-11-21 17:47:43,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 12:48:14] 2025-11-21 17:47:44,009 | INFO     | all job control threads have been joined
[2025-11-21 12:48:14] 2025-11-21 17:47:44,412 | INFO     | all data control threads have been joined
[2025-11-21 12:48:14] 2025-11-21 17:47:44,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:48:14] 2025-11-21 17:47:44,786 | INFO     | aborting loop
[2025-11-21 12:48:14] 2025-11-21 17:47:44,963 | INFO     | [job] retrieve thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:45,015 | INFO     | [job] control thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:45,043 | INFO     | all payload control threads have been joined
[2025-11-21 12:48:14] 2025-11-21 17:47:45,293 | INFO     | [payload] validate_post thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:45,418 | INFO     | [data] control thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:45,648 | INFO     | [data] copytool_in thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:45,714 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:45,746 | INFO     | [payload] failed_post thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:45,788 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:45,791 | INFO     | [job] job monitor thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:45,944 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:45,963 | INFO     | [data] copytool_out thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:46,046 | INFO     | [payload] control thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:46,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:46,160 | INFO     | [job] validate thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:46,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 12:48:14] 2025-11-21 17:47:46,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:48:14] 2025-11-21 17:47:47,776 | INFO     | [job] queue monitor thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:47:50,189 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 12:48:14] 2025-11-21 17:48:04,907 | INFO     | [monitor] cgroup control has ended
[2025-11-21 12:48:14] 2025-11-21 17:48:05,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483921610560)>', '<ExcThread(monitor, started 140483321906944)>']
[2025-11-21 12:48:14] 2025-11-21 17:48:10,985 | INFO     | all workflow threads have been joined
[2025-11-21 12:48:14] 2025-11-21 17:48:10,985 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 12:48:14] 2025-11-21 17:48:10,986 | INFO     | traces error code: 0
[2025-11-21 12:48:14] 2025-11-21 17:48:10,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 12:48:14] 2025-11-21 17:48:13,872 | INFO     | PID=1593 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 12:48:14] 2025-11-21 17:48:13,873 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 12:48:14] 2025-11-21 17:48:13,873 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 12:48:14] 2025-11-21 17:48:13,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 12:48:14] 2025-11-21 17:48:13,873 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 12:48:14] 2025-11-21 17:48:13,873 | INFO     | [monitor] control thread has ended
[2025-11-21 12:48:14] 2025-11-21 17:48:13,975 [wrapper] ==== pilot stdout END ====
[2025-11-21 12:48:14] 2025-11-21 17:48:13,980 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 12:48:14] 2025-11-21 17:48:13,984 [wrapper] pilotpid: 1593
[2025-11-21 12:48:14] 2025-11-21 17:48:13,989 [wrapper] Pilot exit status: 0
[2025-11-21 12:48:14] 2025-11-21 17:48:14,005 [wrapper] pandaids: 6893874851
[2025-11-21 12:48:14] 2025-11-21 17:48:14,046 [wrapper] cleanup supervisor_pilot 10945 1594
[2025-11-21 12:48:14] 2025-11-21 17:48:14,051 [wrapper] Test setup, not cleaning
[2025-11-21 12:48:14] 2025-11-21 17:48:14,056 [wrapper] apfmon messages muted
[2025-11-21 12:48:14] 2025-11-21 17:48:14,060 [wrapper] ==== wrapper stdout END ====
[2025-11-21 12:48:14] 2025-11-21 17:48:14,065 [wrapper] ==== wrapper stderr END ====
[2025-11-21 12:48:14]  *** Error codes and diagnostics ***
[2025-11-21 12:48:14]     "exeErrorCode": 0,
[2025-11-21 12:48:14]     "exeErrorDiag": "",
[2025-11-21 12:48:14]     "pilotErrorCode": 0,
[2025-11-21 12:48:14]     "pilotErrorDiag": "",
[2025-11-21 12:48:14]  *** Listing of results directory ***
[2025-11-21 12:48:14] total 1321912
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 11:08 pilot3.tar.gz
[2025-11-21 12:48:14] -rwx------ 1 boincer umatlas     36292 Nov 20 11:39 runpilot2-wrapper.sh
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 11:39 queuedata.json
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas       100 Nov 21 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 12:48:14] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 00:07 run_atlas
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas       105 Nov 21 00:07 job.xml
[2025-11-21 12:48:14] -rw-r--r-- 2 boincer umatlas 408573645 Nov 21 00:07 EVNT.47493127._000742.pool.root.1
[2025-11-21 12:48:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 00:07 start_atlas.sh
[2025-11-21 12:48:14] drwxrwx--x 2 boincer umatlas      4096 Nov 21 00:07 shared
[2025-11-21 12:48:14] -rw-r--r-- 2 boincer umatlas    590101 Nov 21 00:07 input.tar.gz
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas         0 Nov 21 00:07 boinc_lockfile
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas      2781 Nov 21 00:07 pandaJob.out
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas        57 Nov 21 00:07 setup.sh.local
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas    989817 Nov 21 00:07 agis_schedconf.cvmfs.json
[2025-11-21 12:48:14] drwx------ 5 boincer umatlas      4096 Nov 21 00:07 pilot3
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas      5912 Nov 21 12:38 init_data.xml
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas       533 Nov 21 12:38 boinc_task_state.xml
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas 924578325 Nov 21 12:46 HITS.47523449._007411.pool.root.1
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas      1062 Nov 21 12:47 memory_monitor_summary.json
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas   1526164 Nov 21 12:47 agis_ddmendpoints.agis.ALL.json
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas   1989692 Nov 21 12:47 log.47523449._007411.job.log.tgz.1
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas      8661 Nov 21 12:47 heartbeat.json
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas        29 Nov 21 12:48 wrapper_checkpoint.txt
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 12:48 boinc_mmap_file
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas       744 Nov 21 12:48 pilotlog.txt
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas        95 Nov 21 12:48 pilot_heartbeat.json
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas   6291441 Nov 21 12:48 log.47523449._007411.job.log.1
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas       353 Nov 21 12:48 output.list
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas       620 Nov 21 12:48 runtime_log
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas   8304640 Nov 21 12:48 result.tar.gz
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas       668 Nov 21 12:48 RVHNDmrrMg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7tGKDmw71QRo.diag
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas      9343 Nov 21 12:48 runtime_log.err
[2025-11-21 12:48:14] -rw-r--r-- 1 boincer umatlas     21307 Nov 21 12:48 stderr.txt
[2025-11-21 12:48:14] HITS file was successfully produced:
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas 924578325 Nov 21 12:46 shared/HITS.pool.root.1
[2025-11-21 12:48:14]  *** Contents of shared directory: ***
[2025-11-21 12:48:14] total 1310624
[2025-11-21 12:48:14] -rw-r--r-- 2 boincer umatlas 408573645 Nov 21 00:07 ATLAS.root_0
[2025-11-21 12:48:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 00:07 start_atlas.sh
[2025-11-21 12:48:14] -rw-r--r-- 2 boincer umatlas    590101 Nov 21 00:07 input.tar.gz
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas 924578325 Nov 21 12:46 HITS.pool.root.1
[2025-11-21 12:48:14] -rw------- 1 boincer umatlas   8304640 Nov 21 12:48 result.tar.gz
12:48:16 (30311): run_atlas exited; CPU time 349182.186069
12:48:16 (30311): called boinc_finish(0)

</stderr_txt>
]]>

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