Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:25:06 (3426865): wrapper (7.7.26015): starting
23:25:06 (3426865): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 23:25:06] Arguments: --nthreads 8
[2025-11-20 23:25:06] Threads: 8
[2025-11-20 23:25:06] Checking for CVMFS
[2025-11-20 23:25:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:25:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:25:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:25:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:25:07] 2.13.2.0 5622 22490 170216 153108 1 88 35854626 39288832 4267 16776704 0 13931361 99.630 11951377 34805 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 23:25:07] CVMFS is ok
[2025-11-20 23:25:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 23:25:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 23:25:07] Further information can be found at the LHC@home message board.
[2025-11-20 23:25:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:25:07] Checking for apptainer binary...
[2025-11-20 23:25:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:25:07] Running /usr/bin/apptainer --version
[2025-11-20 23:25:07] apptainer version 1.4.4-1.el9
[2025-11-20 23:25:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:25:07] c-210-28.aglt2.org
[2025-11-20 23:25:07] apptainer works
[2025-11-20 23:25:07] Set ATHENA_PROC_NUMBER=8
[2025-11-20 23:25:07] Set ATHENA_CORE_NUMBER=8
[2025-11-20 23:25:07] Starting ATLAS job with PandaID=6893874408
[2025-11-20 23:25:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 09:59:27]  *** The last 200 lines of the pilot log: ***
[2025-11-21 09:59:27] 2025-11-21 14:58:28,073 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,274 | INFO     | PID=3430552 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-21 09:59:27] 2025-11-21 14:58:28,275 | INFO     | .. there are 5 such processes running
[2025-11-21 09:59:27] 2025-11-21 14:58:28,652 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 09:59:27] 2025-11-21 14:58:28,658 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.10005
[2025-11-21 09:59:27] 2025-11-21 14:58:28,665 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893874408/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,666 | INFO     | extracted standard info from prmon json
[2025-11-21 09:59:27] 2025-11-21 14:58:28,666 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 09:59:27] 2025-11-21 14:58:28,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 09:59:27] 2025-11-21 14:58:28,678 | INFO     | fitting pss+swap vs Time
[2025-11-21 09:59:27] 2025-11-21 14:58:28,679 | INFO     | sum of square deviations: 74979029677.42491
[2025-11-21 09:59:27] 2025-11-21 14:58:28,689 | INFO     | sum of deviations: 676561698985.3804
[2025-11-21 09:59:27] 2025-11-21 14:58:28,689 | INFO     | mean x: 1763718113.1027288
[2025-11-21 09:59:27] 2025-11-21 14:58:28,689 | INFO     | mean y: 2928873.540930979
[2025-11-21 09:59:27] 2025-11-21 14:58:28,689 | INFO     | intersect: -15911709236.151035
[2025-11-21 09:59:27] 2025-11-21 14:58:28,690 | INFO     | chi2: 4.887131706226112
[2025-11-21 09:59:27] 2025-11-21 14:58:28,691 | INFO     | sum of square deviations: 73188215619.87239
[2025-11-21 09:59:27] 2025-11-21 14:58:28,701 | INFO     | sum of deviations: 870778029297.4464
[2025-11-21 09:59:27] 2025-11-21 14:58:28,702 | INFO     | mean x: 1763717960.60356
[2025-11-21 09:59:27] 2025-11-21 14:58:28,702 | INFO     | mean y: 2945396.524271845
[2025-11-21 09:59:27] 2025-11-21 14:58:28,702 | INFO     | intersect: -20981400743.94742
[2025-11-21 09:59:27] 2025-11-21 14:58:28,703 | INFO     | chi2: 2.0947419419844
[2025-11-21 09:59:27] 2025-11-21 14:58:28,703 | INFO     | current chi2=2.0947419419844 (change=57.13759996859225 %)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,704 | INFO     | sum of square deviations: 71426146287.31871
[2025-11-21 09:59:27] 2025-11-21 14:58:28,714 | INFO     | sum of deviations: 896202587349.9884
[2025-11-21 09:59:27] 2025-11-21 14:58:28,714 | INFO     | mean x: 1763717808.1044044
[2025-11-21 09:59:27] 2025-11-21 14:58:28,714 | INFO     | mean y: 2947582.375203915
[2025-11-21 09:59:27] 2025-11-21 14:58:28,714 | INFO     | intersect: -22126882250.80806
[2025-11-21 09:59:27] 2025-11-21 14:58:28,715 | INFO     | chi2: 1.8959997245554718
[2025-11-21 09:59:27] 2025-11-21 14:58:28,715 | INFO     | current chi2=1.8959997245554718 (change=9.487670698026633 %)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,715 | INFO     | right removable region: 612
[2025-11-21 09:59:27] 2025-11-21 14:58:28,716 | INFO     | sum of square deviations: 73188176579.87233
[2025-11-21 09:59:27] 2025-11-21 14:58:28,726 | INFO     | sum of deviations: 528858128261.6744
[2025-11-21 09:59:27] 2025-11-21 14:58:28,727 | INFO     | mean x: 1763718265.60356
[2025-11-21 09:59:27] 2025-11-21 14:58:28,727 | INFO     | mean y: 2941417.9660194176
[2025-11-21 09:59:27] 2025-11-21 14:58:28,727 | INFO     | intersect: -12741695548.225939
[2025-11-21 09:59:27] 2025-11-21 14:58:28,728 | INFO     | chi2: 3.0726649371054853
[2025-11-21 09:59:27] 2025-11-21 14:58:28,728 | INFO     | current chi2=3.0726649371054853 (change=37.1274374866761 %)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,729 | INFO     | sum of square deviations: 71426068207.31871
[2025-11-21 09:59:27] 2025-11-21 14:58:28,739 | INFO     | sum of deviations: 494927939780.74097
[2025-11-21 09:59:27] 2025-11-21 14:58:28,739 | INFO     | mean x: 1763718418.1044044
[2025-11-21 09:59:27] 2025-11-21 14:58:28,739 | INFO     | mean y: 2944352.207177814
[2025-11-21 09:59:27] 2025-11-21 14:58:28,739 | INFO     | intersect: -12218273263.916859
[2025-11-21 09:59:27] 2025-11-21 14:58:28,740 | INFO     | chi2: 3.0451095133175827
[2025-11-21 09:59:27] 2025-11-21 14:58:28,740 | INFO     | current chi2=3.0451095133175827 (change=0.8967923399373422 %)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,740 | INFO     | left removable region: 20
[2025-11-21 09:59:27] 2025-11-21 14:58:28,741 | INFO     | sum of square deviations: 64334053813.71446
[2025-11-21 09:59:27] 2025-11-21 14:58:28,750 | INFO     | sum of deviations: 669827696011.8525
[2025-11-21 09:59:27] 2025-11-21 14:58:28,750 | INFO     | mean x: 1763718387.6030405
[2025-11-21 09:59:27] 2025-11-21 14:58:28,751 | INFO     | mean y: 2967082.748310811
[2025-11-21 09:59:27] 2025-11-21 14:58:28,751 | INFO     | intersect: -18360362350.878036
[2025-11-21 09:59:27] 2025-11-21 14:58:28,752 | INFO     | chi2: 0.02834595469389819
[2025-11-21 09:59:27] 2025-11-21 14:58:28,752 | INFO     | current memory leak: 10.41 B/s (using 592 data points, chi2=0.03)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,753 | INFO     | could have reported an average CPU frequency of 2600 MHz (24 samples)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,753 | INFO     | ..............................
[2025-11-21 09:59:27] 2025-11-21 14:58:28,753 | INFO     | . Timing measurements:
[2025-11-21 09:59:27] 2025-11-21 14:58:28,753 | INFO     | . get job = 0 s
[2025-11-21 09:59:27] 2025-11-21 14:58:28,753 | INFO     | . initial setup = 2 s
[2025-11-21 09:59:27] 2025-11-21 14:58:28,753 | INFO     | . payload setup = 5 s
[2025-11-21 09:59:27] 2025-11-21 14:58:28,753 | INFO     | . stage-in = 0 s
[2025-11-21 09:59:27] 2025-11-21 14:58:28,753 | INFO     | . payload execution = 37954 s
[2025-11-21 09:59:27] 2025-11-21 14:58:28,754 | INFO     | . stage-out = 3 s
[2025-11-21 09:59:27] 2025-11-21 14:58:28,754 | INFO     | . log creation = 0 s
[2025-11-21 09:59:27] 2025-11-21 14:58:28,754 | INFO     | ..............................
[2025-11-21 09:59:27] 2025-11-21 14:58:28,857 | INFO     | 
[2025-11-21 09:59:27] 2025-11-21 14:58:28,857 | INFO     | job summary report
[2025-11-21 09:59:27] 2025-11-21 14:58:28,857 | INFO     | --------------------------------------------------
[2025-11-21 09:59:27] 2025-11-21 14:58:28,857 | INFO     | PanDA job id: 6893874408
[2025-11-21 09:59:27] 2025-11-21 14:58:28,857 | INFO     | task id: 47523449
[2025-11-21 09:59:27] 2025-11-21 14:58:28,857 | INFO     | errors: (none)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 09:59:27] 2025-11-21 14:58:28,858 | INFO     | pilot state: finished 
[2025-11-21 09:59:27] 2025-11-21 14:58:28,858 | INFO     | transexitcode: 0
[2025-11-21 09:59:27] 2025-11-21 14:58:28,858 | INFO     | exeerrorcode: 0
[2025-11-21 09:59:27] 2025-11-21 14:58:28,858 | INFO     | exeerrordiag: 
[2025-11-21 09:59:27] 2025-11-21 14:58:28,858 | INFO     | exitcode: 0
[2025-11-21 09:59:27] 2025-11-21 14:58:28,858 | INFO     | exitmsg: OK
[2025-11-21 09:59:27] 2025-11-21 14:58:28,858 | INFO     | cpuconsumptiontime: 285008 s
[2025-11-21 09:59:27] 2025-11-21 14:58:28,858 | INFO     | nevents: 1000
[2025-11-21 09:59:27] 2025-11-21 14:58:28,859 | INFO     | neventsw: 0
[2025-11-21 09:59:27] 2025-11-21 14:58:28,859 | INFO     | pid: 3437057
[2025-11-21 09:59:27] 2025-11-21 14:58:28,859 | INFO     | pgrp: 3437057
[2025-11-21 09:59:27] 2025-11-21 14:58:28,859 | INFO     | corecount: 8
[2025-11-21 09:59:27] 2025-11-21 14:58:28,859 | INFO     | event service: False
[2025-11-21 09:59:27] 2025-11-21 14:58:28,859 | INFO     | sizes: {0: 2298749, 4: 2299011, 11: 2299039, 37963: 2341642, 37968: 2350636, 37972: 2350692, 37976: 2351066}
[2025-11-21 09:59:27] 2025-11-21 14:58:28,859 | INFO     | --------------------------------------------------
[2025-11-21 09:59:27] 2025-11-21 14:58:28,859 | INFO     | 
[2025-11-21 09:59:27] 2025-11-21 14:58:28,860 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-21 09:59:27] 2025-11-21 14:58:28,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,877 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,877 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,877 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,878 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,879 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,879 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 09:59:27] 2025-11-21 14:58:28,879 | INFO     | job 6893874408 has completed (purged errors)
[2025-11-21 09:59:27] 2025-11-21 14:58:28,879 | INFO     | overall cleanup function is called
[2025-11-21 09:59:27] 2025-11-21 14:58:29,895 | INFO     | --- collectZombieJob: --- 10, [3437057]
[2025-11-21 09:59:27] 2025-11-21 14:58:29,895 | INFO     | zombie collector waiting for pid 3437057
[2025-11-21 09:59:27] 2025-11-21 14:58:29,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 09:59:27] 2025-11-21 14:58:29,896 | INFO     | collected zombie processes
[2025-11-21 09:59:27] 2025-11-21 14:58:29,896 | INFO     | will attempt to kill all subprocesses of pid=3437057
[2025-11-21 09:59:27] 2025-11-21 14:58:30,136 | INFO     | process IDs to be killed: [3437057] (in reverse order)
[2025-11-21 09:59:27] 2025-11-21 14:58:30,203 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 09:59:27] 2025-11-21 14:58:30,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 09:59:27] 2025-11-21 14:58:30,210 | INFO     | did not find any defunct processes belonging to 3437057
[2025-11-21 09:59:27] 2025-11-21 14:58:30,216 | INFO     | did not find any defunct processes belonging to 3437057
[2025-11-21 09:59:27] 2025-11-21 14:58:30,218 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 09:59:27] 2025-11-21 14:58:30,218 | INFO     | ready for new job
[2025-11-21 09:59:27] 2025-11-21 14:58:30,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 09:59:27] 2025-11-21 14:58:30,221 | INFO     | ***************************************
[2025-11-21 09:59:27] 2025-11-21 14:58:30,222 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 09:59:27] 2025-11-21 14:58:30,222 | INFO     | ***************************************
[2025-11-21 09:59:27] 2025-11-21 14:58:30,222 | INFO     | 
[2025-11-21 09:59:27] 2025-11-21 14:58:30,224 | INFO     | architecture information:
[2025-11-21 09:59:27] 2025-11-21 14:58:30,224 | INFO     | executing command: cat /etc/os-release
[2025-11-21 09:59:27] 2025-11-21 14:58:30,236 | INFO     | cat /etc/os-release:
[2025-11-21 09:59:27] NAME="CentOS Linux"
[2025-11-21 09:59:27] VERSION="7 (Core)"
[2025-11-21 09:59:27] ID="centos"
[2025-11-21 09:59:27] ID_LIKE="rhel fedora"
[2025-11-21 09:59:27] VERSION_ID="7"
[2025-11-21 09:59:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 09:59:27] ANSI_COLOR="0;31"
[2025-11-21 09:59:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 09:59:27] HOME_URL="https://www.centos.org/"
[2025-11-21 09:59:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 09:59:27] 
[2025-11-21 09:59:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 09:59:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 09:59:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 09:59:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 09:59:27] 
[2025-11-21 09:59:27] 2025-11-21 14:58:30,236 | INFO     | ***************************************
[2025-11-21 09:59:27] 2025-11-21 14:58:30,739 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-21 09:59:27] 2025-11-21 14:58:30,755 | INFO     | sufficient remaining disk space (48037363712 B)
[2025-11-21 09:59:27] 2025-11-21 14:58:30,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 09:59:27] 2025-11-21 14:58:30,756 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 09:59:27] 2025-11-21 14:58:30,756 | INFO     | update_server=False
[2025-11-21 09:59:27] 2025-11-21 14:58:30,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 09:59:27] 2025-11-21 14:58:30,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:59:27] 2025-11-21 14:58:30,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 09:59:27] 2025-11-21 14:58:31,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:59:27] 2025-11-21 14:58:31,581 | INFO     | aborting loop
[2025-11-21 09:59:27] 2025-11-21 14:58:31,762 | INFO     | [job] retrieve thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:31,762 | INFO     | [job] queue monitor thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:31,816 | INFO     | all data control threads have been joined
[2025-11-21 09:59:27] 2025-11-21 14:58:31,913 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:31,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 09:59:27] 2025-11-21 14:58:31,950 | INFO     | [payload] validate_post thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:31,987 | INFO     | all payload control threads have been joined
[2025-11-21 09:59:27] 2025-11-21 14:58:32,305 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:32,363 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:32,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:32,419 | INFO     | all job control threads have been joined
[2025-11-21 09:59:27] 2025-11-21 14:58:32,586 | INFO     | [job] job monitor thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:32,822 | INFO     | [data] control thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:32,956 | INFO     | [job] validate thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:32,992 | INFO     | [payload] control thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:32,992 | INFO     | [data] copytool_in thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:33,042 | INFO     | [payload] failed_post thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:33,424 | INFO     | [job] control thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:33,938 | INFO     | [data] copytool_out thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:58:34,973 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 09:59:27] 2025-11-21 14:59:00,636 | INFO     | PID=3430552 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 09:59:27] 2025-11-21 14:59:00,637 | INFO     | .. there are 5 such processes running
[2025-11-21 09:59:27] 2025-11-21 14:59:00,637 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 09:59:27] 2025-11-21 14:59:00,638 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 09:59:27] 2025-11-21 14:59:00,638 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 09:59:27] 2025-11-21 14:59:20,831 | INFO     | [monitor] cgroup control has ended
[2025-11-21 09:59:27] 2025-11-21 14:59:22,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703906346816)>', '<ExcThread(monitor, started 140703128614656)>']
[2025-11-21 09:59:27] 2025-11-21 14:59:22,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 09:59:27] 2025-11-21 14:59:22,738 | INFO     | [monitor] control thread has ended
[2025-11-21 09:59:27] 2025-11-21 14:59:27,252 | INFO     | all workflow threads have been joined
[2025-11-21 09:59:27] 2025-11-21 14:59:27,252 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 09:59:27] 2025-11-21 14:59:27,253 | INFO     | traces error code: 0
[2025-11-21 09:59:27] 2025-11-21 14:59:27,253 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 09:59:27] 2025-11-21 14:59:27,384 [wrapper] ==== pilot stdout END ====
[2025-11-21 09:59:27] 2025-11-21 14:59:27,386 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 09:59:27] 2025-11-21 14:59:27,389 [wrapper] pilotpid: 3430552
[2025-11-21 09:59:27] 2025-11-21 14:59:27,391 [wrapper] Pilot exit status: 0
[2025-11-21 09:59:27] 2025-11-21 14:59:27,399 [wrapper] pandaids: 6893874408
[2025-11-21 09:59:27] 2025-11-21 14:59:27,441 [wrapper] cleanup supervisor_pilot   98924 3430553
[2025-11-21 09:59:27] 2025-11-21 14:59:27,444 [wrapper] Test setup, not cleaning
[2025-11-21 09:59:27] 2025-11-21 14:59:27,447 [wrapper] apfmon messages muted
[2025-11-21 09:59:27] 2025-11-21 14:59:27,449 [wrapper] ==== wrapper stdout END ====
[2025-11-21 09:59:27] 2025-11-21 14:59:27,451 [wrapper] ==== wrapper stderr END ====
[2025-11-21 09:59:27]  *** Error codes and diagnostics ***
[2025-11-21 09:59:27]     "exeErrorCode": 0,
[2025-11-21 09:59:27]     "exeErrorDiag": "",
[2025-11-21 09:59:27]     "pilotErrorCode": 0,
[2025-11-21 09:59:27]     "pilotErrorDiag": "",
[2025-11-21 09:59:27]  *** Listing of results directory ***
[2025-11-21 09:59:27] total 1309056
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 11:00 pilot3.tar.gz
[2025-11-21 09:59:27] -rwx------. 1 boincer umatlas     36292 Nov 20 11:04 runpilot2-wrapper.sh
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 11:04 queuedata.json
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas       100 Nov 20 23:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 09:59:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 23:25 run_atlas
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas       105 Nov 20 23:25 job.xml
[2025-11-21 09:59:27] -rw-r--r--. 2 boincer umatlas 408597670 Nov 20 23:25 EVNT.47493127._000719.pool.root.1
[2025-11-21 09:59:27] -rw-r--r--. 2 boincer umatlas    590093 Nov 20 23:25 input.tar.gz
[2025-11-21 09:59:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:25 start_atlas.sh
[2025-11-21 09:59:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 23:25 shared
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas         0 Nov 20 23:25 boinc_lockfile
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas      2781 Nov 20 23:25 pandaJob.out
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas        57 Nov 20 23:25 setup.sh.local
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas    989817 Nov 20 23:25 agis_schedconf.cvmfs.json
[2025-11-21 09:59:27] drwx------. 5 boincer umatlas      4096 Nov 20 23:25 pilot3
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas       532 Nov 21 09:49 boinc_task_state.xml
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas      6663 Nov 21 09:55 init_data.xml
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas 913449997 Nov 21 09:57 HITS.47523449._007181.pool.root.1
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas      1056 Nov 21 09:58 memory_monitor_summary.json
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas   1526164 Nov 21 09:58 agis_ddmendpoints.agis.ALL.json
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas   1882370 Nov 21 09:58 log.47523449._007181.job.log.tgz.1
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas      8622 Nov 21 09:58 heartbeat.json
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas        95 Nov 21 09:59 pilot_heartbeat.json
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 09:59 boinc_mmap_file
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas        29 Nov 21 09:59 wrapper_checkpoint.txt
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas      4823 Nov 21 09:59 pilotlog.txt
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas   5366832 Nov 21 09:59 log.47523449._007181.job.log.1
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas       353 Nov 21 09:59 output.list
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas       620 Nov 21 09:59 runtime_log
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas   7270400 Nov 21 09:59 result.tar.gz
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas       660 Nov 21 09:59 rxPODmkJMg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzsGKDmArc28n.diag
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 09:59 runtime_log.err
[2025-11-21 09:59:27] -rw-r--r--. 1 boincer umatlas     21388 Nov 21 09:59 stderr.txt
[2025-11-21 09:59:27] HITS file was successfully produced:
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas 913449997 Nov 21 09:57 shared/HITS.pool.root.1
[2025-11-21 09:59:27]  *** Contents of shared directory: ***
[2025-11-21 09:59:27] total 1298768
[2025-11-21 09:59:27] -rw-r--r--. 2 boincer umatlas 408597670 Nov 20 23:25 ATLAS.root_0
[2025-11-21 09:59:27] -rw-r--r--. 2 boincer umatlas    590093 Nov 20 23:25 input.tar.gz
[2025-11-21 09:59:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:25 start_atlas.sh
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas 913449997 Nov 21 09:57 HITS.pool.root.1
[2025-11-21 09:59:27] -rw-------. 1 boincer umatlas   7270400 Nov 21 09:59 result.tar.gz
09:59:29 (3426865): run_atlas exited; CPU time 284912.495059
09:59:29 (3426865): called boinc_finish(0)

</stderr_txt>
]]>

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