Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:30:26 (13367): wrapper (7.7.26015): starting
22:30:26 (13367): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 22:30:26] Arguments: --nthreads 8
[2025-11-20 22:30:26] Threads: 8
[2025-11-20 22:30:26] Checking for CVMFS
[2025-11-20 22:30:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 22:30:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 22:30:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 22:30:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 22:30:27] 2.11.2.0 2776 35340 88052 153106 0 82 18376260 20275201 1 130560 0 3255057 99.593 1886312 26674 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 22:30:27] CVMFS is ok
[2025-11-20 22:30:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 22:30:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 22:30:27] Further information can be found at the LHC@home message board.
[2025-11-20 22:30:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 22:30:27] Checking for apptainer binary...
[2025-11-20 22:30:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 22:30:27] Running /usr/bin/apptainer --version
[2025-11-20 22:30:27] apptainer version 1.3.2-1.el7
[2025-11-20 22:30:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 22:30:28] c-115-7.aglt2.org
[2025-11-20 22:30:28] apptainer works
[2025-11-20 22:30:28] Set ATHENA_PROC_NUMBER=8
[2025-11-20 22:30:28] Set ATHENA_CORE_NUMBER=8
[2025-11-20 22:30:28] Starting ATLAS job with PandaID=6893874721
[2025-11-20 22:30:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 09:51:11]  *** The last 200 lines of the pilot log: ***
[2025-11-21 09:51:11] 2025-11-21 14:50:36,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 09:51:11] 2025-11-21 14:50:38,385 | INFO     | time since job start (40792s) is within the limit (172800.0s)
[2025-11-21 09:51:11] 2025-11-21 14:50:38,796 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 09:51:11] 2025-11-21 14:50:38,799 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.375
[2025-11-21 09:51:11] 2025-11-21 14:50:38,801 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893874721/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 09:51:11] 2025-11-21 14:50:38,802 | INFO     | extracted standard info from prmon json
[2025-11-21 09:51:11] 2025-11-21 14:50:38,802 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 09:51:11] 2025-11-21 14:50:38,802 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 09:51:11] 2025-11-21 14:50:38,813 | INFO     | fitting pss+swap vs Time
[2025-11-21 09:51:11] 2025-11-21 14:50:38,814 | INFO     | sum of square deviations: 92844352811.58734
[2025-11-21 09:51:11] 2025-11-21 14:50:38,823 | INFO     | sum of deviations: 607613726734.4138
[2025-11-21 09:51:11] 2025-11-21 14:50:38,823 | INFO     | mean x: 1763716251.573991
[2025-11-21 09:51:11] 2025-11-21 14:50:38,823 | INFO     | mean y: 3337362.759342302
[2025-11-21 09:51:11] 2025-11-21 14:50:38,823 | INFO     | intersect: -11539187002.677094
[2025-11-21 09:51:11] 2025-11-21 14:50:38,824 | INFO     | chi2: 7.125230631701187
[2025-11-21 09:51:11] 2025-11-21 14:50:38,825 | INFO     | sum of square deviations: 90778273049.9275
[2025-11-21 09:51:11] 2025-11-21 14:50:38,833 | INFO     | sum of deviations: 900005262287.3306
[2025-11-21 09:51:11] 2025-11-21 14:50:38,833 | INFO     | mean x: 1763716099.0783134
[2025-11-21 09:51:11] 2025-11-21 14:50:38,833 | INFO     | mean y: 3358947.2243975904
[2025-11-21 09:51:11] 2025-11-21 14:50:38,834 | INFO     | intersect: -17482694896.05956
[2025-11-21 09:51:11] 2025-11-21 14:50:38,834 | INFO     | chi2: 3.245492170662949
[2025-11-21 09:51:11] 2025-11-21 14:50:38,834 | INFO     | current chi2=3.245492170662949 (change=54.45070709398118 %)
[2025-11-21 09:51:11] 2025-11-21 14:50:38,835 | INFO     | sum of square deviations: 88743077588.24269
[2025-11-21 09:51:11] 2025-11-21 14:50:38,844 | INFO     | sum of deviations: 1002138242701.8608
[2025-11-21 09:51:11] 2025-11-21 14:50:38,844 | INFO     | mean x: 1763715946.582701
[2025-11-21 09:51:11] 2025-11-21 14:50:38,844 | INFO     | mean y: 3366586.864946889
[2025-11-21 09:51:11] 2025-11-21 14:50:38,844 | INFO     | intersect: -19913535636.591476
[2025-11-21 09:51:11] 2025-11-21 14:50:38,845 | INFO     | chi2: 2.6048468461256324
[2025-11-21 09:51:11] 2025-11-21 14:50:38,845 | INFO     | current chi2=2.6048468461256324 (change=19.73954306001156 %)
[2025-11-21 09:51:11] 2025-11-21 14:50:38,845 | INFO     | right removable region: 658
[2025-11-21 09:51:11] 2025-11-21 14:50:38,846 | INFO     | sum of square deviations: 90778038809.92746
[2025-11-21 09:51:11] 2025-11-21 14:50:38,854 | INFO     | sum of deviations: 386644841776.2955
[2025-11-21 09:51:11] 2025-11-21 14:50:38,854 | INFO     | mean x: 1763716404.0783134
[2025-11-21 09:51:11] 2025-11-21 14:50:38,855 | INFO     | mean y: 3353641.263554217
[2025-11-21 09:51:11] 2025-11-21 14:50:38,855 | INFO     | intersect: -7508725920.41277
[2025-11-21 09:51:11] 2025-11-21 14:50:38,855 | INFO     | chi2: 4.671340821546355
[2025-11-21 09:51:11] 2025-11-21 14:50:38,855 | INFO     | current chi2=4.671340821546355 (change=34.43944395620149 %)
[2025-11-21 09:51:11] 2025-11-21 14:50:38,856 | INFO     | sum of square deviations: 88742649856.40674
[2025-11-21 09:51:11] 2025-11-21 14:50:38,866 | INFO     | sum of deviations: 344740870964.7764
[2025-11-21 09:51:11] 2025-11-21 14:50:38,866 | INFO     | mean x: 1763716556.5811837
[2025-11-21 09:51:11] 2025-11-21 14:50:38,866 | INFO     | mean y: 3356778.9013657058
[2025-11-21 09:51:11] 2025-11-21 14:50:38,866 | INFO     | intersect: -6848198621.288181
[2025-11-21 09:51:11] 2025-11-21 14:50:38,867 | INFO     | chi2: 4.630836427167473
[2025-11-21 09:51:11] 2025-11-21 14:50:38,867 | INFO     | current chi2=4.630836427167473 (change=0.8670828339490264 %)
[2025-11-21 09:51:11] 2025-11-21 14:50:38,867 | INFO     | left removable region: 20
[2025-11-21 09:51:11] 2025-11-21 14:50:38,868 | INFO     | sum of square deviations: 80526645219.9074
[2025-11-21 09:51:11] 2025-11-21 14:50:38,876 | INFO     | sum of deviations: 688797643211.4125
[2025-11-21 09:51:11] 2025-11-21 14:50:38,876 | INFO     | mean x: 1763716526.0893416
[2025-11-21 09:51:11] 2025-11-21 14:50:38,876 | INFO     | mean y: 3390204.957680251
[2025-11-21 09:51:11] 2025-11-21 14:50:38,876 | INFO     | intersect: -15082843465.224209
[2025-11-21 09:51:11] 2025-11-21 14:50:38,877 | INFO     | chi2: 0.05736728097957773
[2025-11-21 09:51:11] 2025-11-21 14:50:38,877 | INFO     | current memory leak: 8.55 B/s (using 638 data points, chi2=0.06)
[2025-11-21 09:51:11] 2025-11-21 14:50:38,877 | INFO     | could have reported an average CPU frequency of 2391 MHz (26 samples)
[2025-11-21 09:51:11] 2025-11-21 14:50:38,878 | INFO     | ..............................
[2025-11-21 09:51:11] 2025-11-21 14:50:38,878 | INFO     | . Timing measurements:
[2025-11-21 09:51:11] 2025-11-21 14:50:38,878 | INFO     | . get job = 0 s
[2025-11-21 09:51:11] 2025-11-21 14:50:38,878 | INFO     | . initial setup = 2 s
[2025-11-21 09:51:11] 2025-11-21 14:50:38,878 | INFO     | . payload setup = 8 s
[2025-11-21 09:51:11] 2025-11-21 14:50:38,878 | INFO     | . stage-in = 0 s
[2025-11-21 09:51:11] 2025-11-21 14:50:38,878 | INFO     | . payload execution = 40753 s
[2025-11-21 09:51:11] 2025-11-21 14:50:38,878 | INFO     | . stage-out = 3 s
[2025-11-21 09:51:11] 2025-11-21 14:50:38,879 | INFO     | . log creation = 0 s
[2025-11-21 09:51:11] 2025-11-21 14:50:38,879 | INFO     | ..............................
[2025-11-21 09:51:11] 2025-11-21 14:50:38,967 | INFO     | 
[2025-11-21 09:51:11] 2025-11-21 14:50:38,967 | INFO     | job summary report
[2025-11-21 09:51:11] 2025-11-21 14:50:38,967 | INFO     | --------------------------------------------------
[2025-11-21 09:51:11] 2025-11-21 14:50:38,967 | INFO     | PanDA job id: 6893874721
[2025-11-21 09:51:11] 2025-11-21 14:50:38,967 | INFO     | task id: 47523449
[2025-11-21 09:51:11] 2025-11-21 14:50:38,968 | INFO     | errors: (none)
[2025-11-21 09:51:11] 2025-11-21 14:50:38,968 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 09:51:11] 2025-11-21 14:50:38,968 | INFO     | pilot state: finished 
[2025-11-21 09:51:11] 2025-11-21 14:50:38,968 | INFO     | transexitcode: 0
[2025-11-21 09:51:11] 2025-11-21 14:50:38,968 | INFO     | exeerrorcode: 0
[2025-11-21 09:51:11] 2025-11-21 14:50:38,968 | INFO     | exeerrordiag: 
[2025-11-21 09:51:11] 2025-11-21 14:50:38,969 | INFO     | exitcode: 0
[2025-11-21 09:51:11] 2025-11-21 14:50:38,969 | INFO     | exitmsg: OK
[2025-11-21 09:51:11] 2025-11-21 14:50:38,969 | INFO     | cpuconsumptiontime: 316749 s
[2025-11-21 09:51:11] 2025-11-21 14:50:38,969 | INFO     | nevents: 1000
[2025-11-21 09:51:11] 2025-11-21 14:50:38,969 | INFO     | neventsw: 0
[2025-11-21 09:51:11] 2025-11-21 14:50:38,969 | INFO     | pid: 23567
[2025-11-21 09:51:11] 2025-11-21 14:50:38,969 | INFO     | pgrp: 23567
[2025-11-21 09:51:11] 2025-11-21 14:50:38,969 | INFO     | corecount: 8
[2025-11-21 09:51:11] 2025-11-21 14:50:38,969 | INFO     | event service: False
[2025-11-21 09:51:11] 2025-11-21 14:50:38,970 | INFO     | sizes: {0: 2297877, 1: 2298733, 7: 2298995, 12: 2299023, 40766: 2342924, 40770: 2352102, 40776: 2352292}
[2025-11-21 09:51:11] 2025-11-21 14:50:38,970 | INFO     | --------------------------------------------------
[2025-11-21 09:51:11] 2025-11-21 14:50:38,970 | INFO     | 
[2025-11-21 09:51:11] 2025-11-21 14:50:38,970 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 09:51:11] 2025-11-21 14:50:38,998 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:38,999 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:38,999 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:38,999 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:38,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:38,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,000 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,001 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,001 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,001 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,001 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,001 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 09:51:11] 2025-11-21 14:50:39,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 09:51:11] 2025-11-21 14:50:39,002 | INFO     | job 6893874721 has completed (purged errors)
[2025-11-21 09:51:11] 2025-11-21 14:50:39,002 | INFO     | overall cleanup function is called
[2025-11-21 09:51:11] 2025-11-21 14:50:39,494 | INFO     | PID=17047 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 09:51:11] 2025-11-21 14:50:40,018 | INFO     | --- collectZombieJob: --- 10, [23567]
[2025-11-21 09:51:11] 2025-11-21 14:50:40,018 | INFO     | zombie collector waiting for pid 23567
[2025-11-21 09:51:11] 2025-11-21 14:50:40,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 09:51:11] 2025-11-21 14:50:40,019 | INFO     | collected zombie processes
[2025-11-21 09:51:11] 2025-11-21 14:50:40,019 | INFO     | will attempt to kill all subprocesses of pid=23567
[2025-11-21 09:51:11] 2025-11-21 14:50:40,102 | INFO     | process IDs to be killed: [23567] (in reverse order)
[2025-11-21 09:51:11] 2025-11-21 14:50:40,157 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 09:51:11] 2025-11-21 14:50:40,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 09:51:11] 2025-11-21 14:50:40,162 | INFO     | did not find any defunct processes belonging to 23567
[2025-11-21 09:51:11] 2025-11-21 14:50:40,165 | INFO     | did not find any defunct processes belonging to 23567
[2025-11-21 09:51:11] 2025-11-21 14:50:40,168 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 09:51:11] 2025-11-21 14:50:40,168 | INFO     | ready for new job
[2025-11-21 09:51:11] 2025-11-21 14:50:40,169 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 09:51:11] 2025-11-21 14:50:40,172 | INFO     | ***************************************
[2025-11-21 09:51:11] 2025-11-21 14:50:40,172 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 09:51:11] 2025-11-21 14:50:40,172 | INFO     | ***************************************
[2025-11-21 09:51:11] 2025-11-21 14:50:40,172 | INFO     | 
[2025-11-21 09:51:11] 2025-11-21 14:50:40,173 | INFO     | architecture information:
[2025-11-21 09:51:11] 2025-11-21 14:50:40,173 | INFO     | executing command: cat /etc/os-release
[2025-11-21 09:51:11] 2025-11-21 14:50:40,192 | INFO     | cat /etc/os-release:
[2025-11-21 09:51:11] NAME="CentOS Linux"
[2025-11-21 09:51:11] VERSION="7 (Core)"
[2025-11-21 09:51:11] ID="centos"
[2025-11-21 09:51:11] ID_LIKE="rhel fedora"
[2025-11-21 09:51:11] VERSION_ID="7"
[2025-11-21 09:51:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 09:51:11] ANSI_COLOR="0;31"
[2025-11-21 09:51:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 09:51:11] HOME_URL="https://www.centos.org/"
[2025-11-21 09:51:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 09:51:11] 
[2025-11-21 09:51:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 09:51:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 09:51:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 09:51:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 09:51:11] 
[2025-11-21 09:51:11] 2025-11-21 14:50:40,192 | INFO     | ***************************************
[2025-11-21 09:51:11] 2025-11-21 14:50:40,696 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 09:51:11] 2025-11-21 14:50:40,716 | INFO     | sufficient remaining disk space (17452498944 B)
[2025-11-21 09:51:11] 2025-11-21 14:50:40,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 09:51:11] 2025-11-21 14:50:40,717 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 09:51:11] 2025-11-21 14:50:40,717 | INFO     | update_server=False
[2025-11-21 09:51:11] 2025-11-21 14:50:40,717 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 09:51:11] 2025-11-21 14:50:40,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:51:11] 2025-11-21 14:50:40,718 | INFO     | aborting loop
[2025-11-21 09:51:11] 2025-11-21 14:50:40,719 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:51:11] 2025-11-21 14:50:40,757 | INFO     | all job control threads have been joined
[2025-11-21 09:51:11] 2025-11-21 14:50:40,799 | INFO     | all data control threads have been joined
[2025-11-21 09:51:11] 2025-11-21 14:50:40,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 09:51:11] 2025-11-21 14:50:41,421 | INFO     | all payload control threads have been joined
[2025-11-21 09:51:11] 2025-11-21 14:50:41,723 | INFO     | [job] retrieve thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:41,724 | INFO     | [job] job monitor thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:41,725 | INFO     | [job] queue monitor thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:41,763 | INFO     | [job] control thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:41,804 | INFO     | [data] control thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:41,861 | INFO     | [data] copytool_in thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:41,949 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:42,185 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:42,208 | INFO     | [job] validate thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:42,235 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:42,295 | INFO     | [payload] failed_post thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:42,426 | INFO     | [payload] control thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:42,914 | INFO     | [data] copytool_out thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:43,190 | INFO     | [payload] validate_post thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:43,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 09:51:11] 2025-11-21 14:50:47,490 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:50,790 | INFO     | job.realtimelogging is not enabled
[2025-11-21 09:51:11] 2025-11-21 14:50:51,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 09:51:11] 2025-11-21 14:50:53,209 | INFO     | [monitor] cgroup control has ended
[2025-11-21 09:51:11] 2025-11-21 14:50:54,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725058447168)>', '<ExcThread(monitor, started 139724312262400)>']
[2025-11-21 09:51:11] 2025-11-21 14:50:59,128 | INFO     | all workflow threads have been joined
[2025-11-21 09:51:11] 2025-11-21 14:50:59,128 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 09:51:11] 2025-11-21 14:50:59,134 | INFO     | traces error code: 0
[2025-11-21 09:51:11] 2025-11-21 14:50:59,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 09:51:11] 2025-11-21 14:51:11,609 | INFO     | PID=17047 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 09:51:11] 2025-11-21 14:51:11,610 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 09:51:11] 2025-11-21 14:51:11,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 09:51:11] 2025-11-21 14:51:11,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 09:51:11] 2025-11-21 14:51:11,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 09:51:11] 2025-11-21 14:51:11,610 | INFO     | [monitor] control thread has ended
[2025-11-21 09:51:11] 2025-11-21 14:51:11,726 [wrapper] ==== pilot stdout END ====
[2025-11-21 09:51:11] 2025-11-21 14:51:11,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 09:51:11] 2025-11-21 14:51:11,735 [wrapper] pilotpid: 17047
[2025-11-21 09:51:11] 2025-11-21 14:51:11,739 [wrapper] Pilot exit status: 0
[2025-11-21 09:51:11] 2025-11-21 14:51:11,756 [wrapper] pandaids: 6893874721
[2025-11-21 09:51:11] 2025-11-21 14:51:11,801 [wrapper] cleanup supervisor_pilot 32417 17048
[2025-11-21 09:51:11] 2025-11-21 14:51:11,806 [wrapper] Test setup, not cleaning
[2025-11-21 09:51:11] 2025-11-21 14:51:11,811 [wrapper] apfmon messages muted
[2025-11-21 09:51:11] 2025-11-21 14:51:11,816 [wrapper] ==== wrapper stdout END ====
[2025-11-21 09:51:11] 2025-11-21 14:51:11,821 [wrapper] ==== wrapper stderr END ====
[2025-11-21 09:51:11]  *** Error codes and diagnostics ***
[2025-11-21 09:51:11]     "exeErrorCode": 0,
[2025-11-21 09:51:11]     "exeErrorDiag": "",
[2025-11-21 09:51:11]     "pilotErrorCode": 0,
[2025-11-21 09:51:11]     "pilotErrorDiag": "",
[2025-11-21 09:51:11]  *** Listing of results directory ***
[2025-11-21 09:51:11] total 1332560
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas    598293 Nov  6 03:41 pilot3.tar.gz
[2025-11-21 09:51:11] -rwx------ 1 boincer umatlas     36292 Nov 20 11:25 runpilot2-wrapper.sh
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 11:25 queuedata.json
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas       100 Nov 20 22:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 09:51:11] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 22:30 run_atlas
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas       105 Nov 20 22:30 job.xml
[2025-11-21 09:51:11] -rw-r--r-- 2 boincer umatlas 411618775 Nov 20 22:30 EVNT.47493127._000734.pool.root.1
[2025-11-21 09:51:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 22:30 start_atlas.sh
[2025-11-21 09:51:11] drwxrwx--x 2 boincer umatlas      4096 Nov 20 22:30 shared
[2025-11-21 09:51:11] -rw-r--r-- 2 boincer umatlas    611277 Nov 20 22:30 input.tar.gz
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas         0 Nov 20 22:30 boinc_lockfile
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas      2784 Nov 20 22:30 pandaJob.out
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas        57 Nov 20 22:30 setup.sh.local
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas    989817 Nov 20 22:30 agis_schedconf.cvmfs.json
[2025-11-21 09:51:11] drwx------ 7 boincer umatlas      4096 Nov 20 22:30 pilot3
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas       533 Nov 21 09:41 boinc_task_state.xml
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas      5911 Nov 21 09:47 init_data.xml
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas 933837664 Nov 21 09:49 HITS.47523449._007338.pool.root.1
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas        95 Nov 21 09:50 pilot_heartbeat.json
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas      1064 Nov 21 09:50 memory_monitor_summary.json
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas   1526164 Nov 21 09:50 agis_ddmendpoints.agis.ALL.json
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas   1934266 Nov 21 09:50 log.47523449._007338.job.log.tgz.1
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas      8658 Nov 21 09:50 heartbeat.json
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 09:50 boinc_mmap_file
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas        29 Nov 21 09:50 wrapper_checkpoint.txt
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas       745 Nov 21 09:51 pilotlog.txt
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas   5626736 Nov 21 09:51 log.47523449._007338.job.log.1
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas       353 Nov 21 09:51 output.list
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas       620 Nov 21 09:51 runtime_log
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas   7577600 Nov 21 09:51 result.tar.gz
[2025-11-21 09:51:11] -rw------- 1 boincer umatlas       667 Nov 21 09:51 w9uLDmgeMg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmtGKDmmc5m6m.diag
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas      9338 Nov 21 09:51 runtime_log.err
[2025-11-21 09:51:11] -rw-r--r-- 1 boincer umatlas     21363 Nov 21 09:51 stderr.txt
[2025-11-21 09:51:12] HITS file was successfully produced:
[2025-11-21 09:51:12] -rw------- 1 boincer umatlas 933837664 Nov 21 09:49 shared/HITS.pool.root.1
[2025-11-21 09:51:12]  *** Contents of shared directory: ***
[2025-11-21 09:51:12] total 1321948
[2025-11-21 09:51:12] -rw-r--r-- 2 boincer umatlas 411618775 Nov 20 22:30 ATLAS.root_0
[2025-11-21 09:51:12] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 22:30 start_atlas.sh
[2025-11-21 09:51:12] -rw-r--r-- 2 boincer umatlas    611277 Nov 20 22:30 input.tar.gz
[2025-11-21 09:51:12] -rw------- 1 boincer umatlas 933837664 Nov 21 09:49 HITS.pool.root.1
[2025-11-21 09:51:12] -rw------- 1 boincer umatlas   7577600 Nov 21 09:51 result.tar.gz
09:51:13 (13367): run_atlas exited; CPU time 314983.584255
09:51:13 (13367): called boinc_finish(0)

</stderr_txt>
]]>

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