Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:05:55 (25485): wrapper (7.7.26015): starting
05:05:55 (25485): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 05:05:55] Arguments: --nthreads 8
[2025-11-24 05:05:55] Threads: 8
[2025-11-24 05:05:55] Checking for CVMFS
[2025-11-24 05:05:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 05:05:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 05:05:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 05:05:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 05:05:58] 2.11.2.0 12000 219148 138332 153231 0 213 17924158 25165825 4462 130560 2 105901373 99.909 41570206 3209 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 05:05:58] CVMFS is ok
[2025-11-24 05:05:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 05:05:58] Checking for apptainer binary...
[2025-11-24 05:05:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 05:05:58] Running /usr/bin/apptainer --version
[2025-11-24 05:05:58] apptainer version 1.3.2-1.el7
[2025-11-24 05:05:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 05:06:10] cg-vwn246.simple-grid.lan
[2025-11-24 05:06:10] apptainer works
[2025-11-24 05:06:10] Set ATHENA_PROC_NUMBER=8
[2025-11-24 05:06:10] Set ATHENA_CORE_NUMBER=8
[2025-11-24 05:06:10] Starting ATLAS job with PandaID=6893874614
[2025-11-24 05:06:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:36:22]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:36:22] 2025-11-25 00:35:24,079 | INFO     | monitor loop #4973: job 0:6893874614 is in state 'finished'
[2025-11-25 01:36:22] 2025-11-25 00:35:24,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:36:22] 2025-11-25 00:35:25,053 | INFO     | time since job start (73522s) is within the limit (172800.0s)
[2025-11-25 01:36:22] 2025-11-25 00:35:26,584 | INFO     | monitor loop #4974: job 0:6893874614 is in state 'finished'
[2025-11-25 01:36:22] 2025-11-25 00:35:26,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:36:22] 2025-11-25 00:35:27,067 | INFO     | time since job start (73524s) is within the limit (172800.0s)
[2025-11-25 01:36:22] 2025-11-25 00:35:29,074 | INFO     | time since job start (73526s) is within the limit (172800.0s)
[2025-11-25 01:36:22] 2025-11-25 00:35:29,097 | INFO     | monitor loop #4975: job 0:6893874614 is in state 'finished'
[2025-11-25 01:36:22] 2025-11-25 00:35:29,097 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:36:22] 2025-11-25 00:35:31,085 | INFO     | time since job start (73528s) is within the limit (172800.0s)
[2025-11-25 01:36:22] 2025-11-25 00:35:31,601 | INFO     | monitor loop #4976: job 0:6893874614 is in state 'finished'
[2025-11-25 01:36:22] 2025-11-25 00:35:31,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:36:22] 2025-11-25 00:35:33,095 | INFO     | time since job start (73530s) is within the limit (172800.0s)
[2025-11-25 01:36:22] 2025-11-25 00:35:34,109 | INFO     | monitor loop #4977: job 0:6893874614 is in state 'finished'
[2025-11-25 01:36:22] 2025-11-25 00:35:34,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:36:22] 2025-11-25 00:35:34,121 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 01:36:22] 2025-11-25 00:35:34,122 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 01:36:22] 2025-11-25 00:35:34,124 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893874614/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 01:36:22] 2025-11-25 00:35:34,125 | INFO     | extracted standard info from prmon json
[2025-11-25 01:36:22] 2025-11-25 00:35:34,125 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 01:36:22] 2025-11-25 00:35:34,125 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 01:36:22] 2025-11-25 00:35:34,154 | INFO     | fitting pss+swap vs Time
[2025-11-25 01:36:22] 2025-11-25 00:35:34,162 | INFO     | sum of square deviations: 529157357090.38007
[2025-11-25 01:36:22] 2025-11-25 00:35:34,217 | INFO     | sum of deviations: 1319951566931.5042
[2025-11-25 01:36:22] 2025-11-25 00:35:34,217 | INFO     | mean x: 1763994332.0368202
[2025-11-25 01:36:22] 2025-11-25 00:35:34,217 | INFO     | mean y: 2842456.8066945607
[2025-11-25 01:36:22] 2025-11-25 00:35:34,217 | INFO     | intersect: -4397336528.577051
[2025-11-25 01:36:22] 2025-11-25 00:35:34,219 | INFO     | chi2: 22.6816833603793
[2025-11-25 01:36:22] 2025-11-25 00:35:34,221 | INFO     | sum of square deviations: 522543387707.4823
[2025-11-25 01:36:22] 2025-11-25 00:35:34,265 | INFO     | sum of deviations: 1714487798529.8303
[2025-11-25 01:36:22] 2025-11-25 00:35:34,265 | INFO     | mean x: 1763994179.5411766
[2025-11-25 01:36:22] 2025-11-25 00:35:34,266 | INFO     | mean y: 2851552.3605042016
[2025-11-25 01:36:22] 2025-11-25 00:35:34,266 | INFO     | intersect: -5784890802.909721
[2025-11-25 01:36:22] 2025-11-25 00:35:34,267 | INFO     | chi2: 19.387071282578766
[2025-11-25 01:36:22] 2025-11-25 00:35:34,267 | INFO     | current chi2=19.387071282578766 (change=14.525430169594951 %)
[2025-11-25 01:36:22] 2025-11-25 00:35:34,268 | INFO     | right removable region: 1189
[2025-11-25 01:36:22] 2025-11-25 00:35:34,269 | INFO     | sum of square deviations: 522542631917.4828
[2025-11-25 01:36:22] 2025-11-25 00:35:34,312 | INFO     | sum of deviations: 808739715558.79
[2025-11-25 01:36:22] 2025-11-25 00:35:34,312 | INFO     | mean x: 1763994484.5411766
[2025-11-25 01:36:22] 2025-11-25 00:35:34,313 | INFO     | mean y: 2854242.5655462183
[2025-11-25 01:36:22] 2025-11-25 00:35:34,313 | INFO     | intersect: -2727281655.514419
[2025-11-25 01:36:22] 2025-11-25 00:35:34,314 | INFO     | chi2: 17.916695944161976
[2025-11-25 01:36:22] 2025-11-25 00:35:34,314 | INFO     | current chi2=17.916695944161976 (change=21.008085425180013 %)
[2025-11-25 01:36:22] 2025-11-25 00:35:34,315 | INFO     | left removable region: 10
[2025-11-25 01:36:22] 2025-11-25 00:35:34,316 | INFO     | sum of square deviations: 508185791557.1477
[2025-11-25 01:36:22] 2025-11-25 00:35:34,354 | INFO     | sum of deviations: 1005841469567.5244
[2025-11-25 01:36:22] 2025-11-25 00:35:34,355 | INFO     | mean x: 1763994454.0491943
[2025-11-25 01:36:22] 2025-11-25 00:35:34,355 | INFO     | mean y: 2872089.5597964376
[2025-11-25 01:36:22] 2025-11-25 00:35:34,355 | INFO     | intersect: -3488565104.1742535
[2025-11-25 01:36:22] 2025-11-25 00:35:34,357 | INFO     | chi2: 12.231715800162217
[2025-11-25 01:36:22] 2025-11-25 00:35:34,357 | INFO     | current memory leak: 1.98 B/s (using 1179 data points, chi2=12.23)
[2025-11-25 01:36:22] 2025-11-25 00:35:34,358 | INFO     | could have reported an average CPU frequency of 1999 MHz (40 samples)
[2025-11-25 01:36:22] 2025-11-25 00:35:34,359 | INFO     | ..............................
[2025-11-25 01:36:22] 2025-11-25 00:35:34,359 | INFO     | . Timing measurements:
[2025-11-25 01:36:22] 2025-11-25 00:35:34,359 | INFO     | . get job = 0 s
[2025-11-25 01:36:22] 2025-11-25 00:35:34,359 | INFO     | . initial setup = 6 s
[2025-11-25 01:36:22] 2025-11-25 00:35:34,359 | INFO     | . payload setup = 157 s
[2025-11-25 01:36:22] 2025-11-25 00:35:34,359 | INFO     | . stage-in = 0 s
[2025-11-25 01:36:22] 2025-11-25 00:35:34,359 | INFO     | . payload execution = 73053 s
[2025-11-25 01:36:22] 2025-11-25 00:35:34,359 | INFO     | . stage-out = 5 s
[2025-11-25 01:36:22] 2025-11-25 00:35:34,359 | INFO     | . log creation = 2 s
[2025-11-25 01:36:22] 2025-11-25 00:35:34,360 | INFO     | ..............................
[2025-11-25 01:36:22] 2025-11-25 00:35:34,490 | INFO     | 
[2025-11-25 01:36:22] 2025-11-25 00:35:34,490 | INFO     | job summary report
[2025-11-25 01:36:22] 2025-11-25 00:35:34,490 | INFO     | --------------------------------------------------
[2025-11-25 01:36:22] 2025-11-25 00:35:34,490 | INFO     | PanDA job id: 6893874614
[2025-11-25 01:36:22] 2025-11-25 00:35:34,490 | INFO     | task id: 47523449
[2025-11-25 01:36:22] 2025-11-25 00:35:34,490 | INFO     | errors: (none)
[2025-11-25 01:36:22] 2025-11-25 00:35:34,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 01:36:22] 2025-11-25 00:35:34,491 | INFO     | pilot state: finished 
[2025-11-25 01:36:22] 2025-11-25 00:35:34,491 | INFO     | transexitcode: 0
[2025-11-25 01:36:22] 2025-11-25 00:35:34,491 | INFO     | exeerrorcode: 0
[2025-11-25 01:36:22] 2025-11-25 00:35:34,491 | INFO     | exeerrordiag: 
[2025-11-25 01:36:22] 2025-11-25 00:35:34,491 | INFO     | exitcode: 0
[2025-11-25 01:36:22] 2025-11-25 00:35:34,491 | INFO     | exitmsg: OK
[2025-11-25 01:36:22] 2025-11-25 00:35:34,491 | INFO     | cpuconsumptiontime: 332147 s
[2025-11-25 01:36:22] 2025-11-25 00:35:34,491 | INFO     | nevents: 1000
[2025-11-25 01:36:22] 2025-11-25 00:35:34,492 | INFO     | neventsw: 0
[2025-11-25 01:36:22] 2025-11-25 00:35:34,492 | INFO     | pid: 3460
[2025-11-25 01:36:22] 2025-11-25 00:35:34,492 | INFO     | pgrp: 3460
[2025-11-25 01:36:22] 2025-11-25 00:35:34,492 | INFO     | corecount: 8
[2025-11-25 01:36:22] 2025-11-25 00:35:34,492 | INFO     | event service: False
[2025-11-25 01:36:22] 2025-11-25 00:35:34,492 | INFO     | sizes: {0: 2298806, 1: 2298806, 12: 2298834, 22: 2298862, 33: 2298890, 44: 2298946, 55: 2299102, 65: 2299130, 76: 2299158, 87: 2299214, 89: 2299504, 98: 2299812, 7
[2025-11-25 01:36:22] 2025-11-25 00:35:34,492 | INFO     | --------------------------------------------------
[2025-11-25 01:36:22] 2025-11-25 00:35:34,492 | INFO     | 
[2025-11-25 01:36:22] 2025-11-25 00:35:34,492 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-25 01:36:22] 2025-11-25 00:35:35,101 | INFO     | time since job start (73532s) is within the limit (172800.0s)
[2025-11-25 01:36:22] 2025-11-25 00:35:35,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,205 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,205 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,205 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,205 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,206 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,206 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 01:36:22] 2025-11-25 00:35:35,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,207 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 01:36:22] 2025-11-25 00:35:35,207 | INFO     | job 6893874614 has completed (purged errors)
[2025-11-25 01:36:22] 2025-11-25 00:35:35,207 | INFO     | overall cleanup function is called
[2025-11-25 01:36:22] 2025-11-25 00:35:36,230 | INFO     | --- collectZombieJob: --- 10, [3460]
[2025-11-25 01:36:22] 2025-11-25 00:35:36,230 | INFO     | zombie collector waiting for pid 3460
[2025-11-25 01:36:22] 2025-11-25 00:35:36,230 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 01:36:22] 2025-11-25 00:35:36,230 | INFO     | collected zombie processes
[2025-11-25 01:36:22] 2025-11-25 00:35:36,231 | INFO     | will attempt to kill all subprocesses of pid=3460
[2025-11-25 01:36:22] 2025-11-25 00:35:36,306 | INFO     | process IDs to be killed: [3460] (in reverse order)
[2025-11-25 01:36:22] 2025-11-25 00:35:37,381 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 01:36:22] 2025-11-25 00:35:37,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 01:36:22] 2025-11-25 00:35:37,384 | INFO     | did not find any defunct processes belonging to 3460
[2025-11-25 01:36:22] 2025-11-25 00:35:37,386 | INFO     | did not find any defunct processes belonging to 3460
[2025-11-25 01:36:22] 2025-11-25 00:35:37,411 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 01:36:22] 2025-11-25 00:35:37,412 | INFO     | ready for new job
[2025-11-25 01:36:22] 2025-11-25 00:35:37,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 01:36:22] 2025-11-25 00:35:37,417 | INFO     | ***************************************
[2025-11-25 01:36:22] 2025-11-25 00:35:37,417 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 01:36:22] 2025-11-25 00:35:37,417 | INFO     | ***************************************
[2025-11-25 01:36:22] 2025-11-25 00:35:37,417 | INFO     | 
[2025-11-25 01:36:22] 2025-11-25 00:35:37,422 | INFO     | pilot is running in a VM
[2025-11-25 01:36:22] 2025-11-25 00:35:37,423 | INFO     | architecture information:
[2025-11-25 01:36:22] 2025-11-25 00:35:37,427 | INFO     | executing command: cat /etc/os-release
[2025-11-25 01:36:22] 2025-11-25 00:35:37,651 | INFO     | cat /etc/os-release:
[2025-11-25 01:36:22] NAME="CentOS Linux"
[2025-11-25 01:36:22] VERSION="7 (Core)"
[2025-11-25 01:36:22] ID="centos"
[2025-11-25 01:36:22] ID_LIKE="rhel fedora"
[2025-11-25 01:36:22] VERSION_ID="7"
[2025-11-25 01:36:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 01:36:22] ANSI_COLOR="0;31"
[2025-11-25 01:36:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 01:36:22] HOME_URL="https://www.centos.org/"
[2025-11-25 01:36:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 01:36:22] 
[2025-11-25 01:36:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 01:36:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 01:36:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 01:36:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 01:36:22] 
[2025-11-25 01:36:22] 2025-11-25 00:35:37,652 | INFO     | ***************************************
[2025-11-25 01:36:22] 2025-11-25 00:35:38,155 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-25 01:36:22] 2025-11-25 00:35:38,431 | INFO     | sufficient remaining disk space (493055115264 B)
[2025-11-25 01:36:22] 2025-11-25 00:35:38,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:36:22] 2025-11-25 00:35:38,432 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:36:22] 2025-11-25 00:35:38,432 | INFO     | update_server=False
[2025-11-25 01:36:22] 2025-11-25 00:35:38,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:36:22] 2025-11-25 00:35:38,433 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:36:22] 2025-11-25 00:35:38,433 | INFO     | aborting loop
[2025-11-25 01:36:22] 2025-11-25 00:35:38,471 | INFO     | all job control threads have been joined
[2025-11-25 01:36:22] 2025-11-25 00:35:38,696 | INFO     | all payload control threads have been joined
[2025-11-25 01:36:22] 2025-11-25 00:35:38,850 | INFO     | all data control threads have been joined
[2025-11-25 01:36:22] 2025-11-25 00:35:39,438 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:39,439 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:39,472 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:39,477 | INFO     | [job] control thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:39,480 | INFO     | [job] validate thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:39,486 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:39,505 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:36:22] 2025-11-25 00:35:39,511 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:39,702 | INFO     | [payload] control thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:39,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:36:22] 2025-11-25 00:35:39,856 | INFO     | [data] control thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:40,162 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:40,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:36:22] 2025-11-25 00:35:40,511 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:40,541 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:40,798 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:40,903 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:41,837 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:35:44,264 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:36:22] 2025-11-25 00:36:08,246 | INFO     | PID=29268 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 01:36:22] 2025-11-25 00:36:08,246 | INFO     | .. there are 2 such processes running
[2025-11-25 01:36:22] 2025-11-25 00:36:08,247 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:36:22] 2025-11-25 00:36:08,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:36:22] 2025-11-25 00:36:08,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:36:22] 2025-11-25 00:36:11,183 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:36:22] 2025-11-25 00:36:12,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140320320509760)>', '<ExcThread(monitor, started 140319668565760)>']
[2025-11-25 01:36:22] 2025-11-25 00:36:13,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:36:22] 2025-11-25 00:36:13,277 | INFO     | [monitor] control thread has ended
[2025-11-25 01:36:22] 2025-11-25 00:36:17,388 | INFO     | all workflow threads have been joined
[2025-11-25 01:36:22] 2025-11-25 00:36:17,388 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:36:22] 2025-11-25 00:36:17,388 | INFO     | traces error code: 0
[2025-11-25 01:36:22] 2025-11-25 00:36:17,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:36:22] 2025-11-25 00:36:17,754 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:36:22] 2025-11-25 00:36:17,830 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:36:22] 2025-11-25 00:36:17,942 [wrapper] pilotpid: 29268
[2025-11-25 01:36:22] 2025-11-25 00:36:18,072 [wrapper] Pilot exit status: 0
[2025-11-25 01:36:22] 2025-11-25 00:36:18,307 [wrapper] pandaids: 6893874614
[2025-11-25 01:36:22] 2025-11-25 00:36:19,132 [wrapper] cleanup supervisor_pilot  7249 29269
[2025-11-25 01:36:22] 2025-11-25 00:36:19,215 [wrapper] Test setup, not cleaning
[2025-11-25 01:36:22] 2025-11-25 00:36:19,350 [wrapper] apfmon messages muted
[2025-11-25 01:36:22] 2025-11-25 00:36:19,439 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:36:22] 2025-11-25 00:36:19,523 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:36:22]  *** Error codes and diagnostics ***
[2025-11-25 01:36:22]     "exeErrorCode": 0,
[2025-11-25 01:36:22]     "exeErrorDiag": "",
[2025-11-25 01:36:22]     "pilotErrorCode": 0,
[2025-11-25 01:36:22]     "pilotErrorDiag": "",
[2025-11-25 01:36:22]  *** Listing of results directory ***
[2025-11-25 01:36:22] total 1318500
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc    576529 Nov 20 17:08 pilot3.tar.gz
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc      5112 Nov 20 17:12 queuedata.json
[2025-11-25 01:36:22] -rwx------. 1 boinc boinc     36292 Nov 20 17:13 runpilot2-wrapper.sh
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc       100 Nov 24 05:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:36:22] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 05:05 run_atlas
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc       105 Nov 24 05:05 job.xml
[2025-11-25 01:36:22] -rw-r--r--. 2 boinc boinc 411477039 Nov 24 05:05 EVNT.47493127._000727.pool.root.1
[2025-11-25 01:36:22] -rw-r--r--. 2 boinc boinc     15847 Nov 24 05:05 start_atlas.sh
[2025-11-25 01:36:22] drwxrwx--x. 2 boinc boinc        68 Nov 24 05:05 shared
[2025-11-25 01:36:22] -rw-r--r--. 2 boinc boinc    590103 Nov 24 05:05 input.tar.gz
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc      6391 Nov 24 05:05 init_data.xml
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc         0 Nov 24 05:05 boinc_lockfile
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc      2785 Nov 24 05:06 pandaJob.out
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc    989786 Nov 24 05:09 agis_schedconf.cvmfs.json
[2025-11-25 01:36:22] drwx------. 5 boinc boinc      4096 Nov 24 05:10 pilot3
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc       533 Nov 25 01:04 boinc_task_state.xml
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc 910596863 Nov 25 01:32 HITS.47523449._007267.pool.root.1
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc      1033 Nov 25 01:33 memory_monitor_summary.json
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc   1516227 Nov 25 01:33 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc   2332404 Nov 25 01:33 log.47523449._007267.job.log.tgz.1
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc      7278 Nov 25 01:35 heartbeat.json
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc        95 Nov 25 01:36 pilot_heartbeat.json
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc      4884 Nov 25 01:36 pilotlog.txt
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc      8192 Nov 25 01:36 boinc_mmap_file
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc        29 Nov 25 01:36 wrapper_checkpoint.txt
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc   9754714 Nov 25 01:36 log.47523449._007267.job.log.1
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc       353 Nov 25 01:36 output.list
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc       620 Nov 25 01:36 runtime_log
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc  12103680 Nov 25 01:36 result.tar.gz
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc      8817 Nov 25 01:36 runtime_log.err
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc       661 Nov 25 01:36 r7MODm3SMg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxHIKDmy8Q2cn.diag
[2025-11-25 01:36:22] -rw-r--r--. 1 boinc boinc     21439 Nov 25 01:36 stderr.txt
[2025-11-25 01:36:22] HITS file was successfully produced:
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc 910596863 Nov 25 01:32 shared/HITS.pool.root.1
[2025-11-25 01:36:22]  *** Contents of shared directory: ***
[2025-11-25 01:36:22] total 1303508
[2025-11-25 01:36:22] -rw-r--r--. 2 boinc boinc 411477039 Nov 24 05:05 ATLAS.root_0
[2025-11-25 01:36:22] -rw-r--r--. 2 boinc boinc     15847 Nov 24 05:05 start_atlas.sh
[2025-11-25 01:36:22] -rw-r--r--. 2 boinc boinc    590103 Nov 24 05:05 input.tar.gz
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc 910596863 Nov 25 01:32 HITS.pool.root.1
[2025-11-25 01:36:22] -rw-------. 1 boinc boinc  12103680 Nov 25 01:36 result.tar.gz
01:36:24 (25485): run_atlas exited; CPU time 332328.392017
01:36:24 (25485): called boinc_finish(0)

</stderr_txt>
]]>

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