Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
21:24:02 (129987): wrapper (7.7.26015): starting
21:24:02 (129987): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 21:24:02] Arguments: --nthreads 8
[2025-11-20 21:24:02] Threads: 8
[2025-11-20 21:24:02] Checking for CVMFS
[2025-11-20 21:24:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 21:24:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 21:24:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 21:24:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 21:24:04] 2.13.3.0 4524 81 51664 153110 2 49 1194444 4096001 5652 130560 0 2707430 99.775 502919 872 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-20 21:24:04] CVMFS is ok
[2025-11-20 21:24:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 21:24:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-20 21:24:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-20 21:24:04] Further information can be found at the LHC@home message board.
[2025-11-20 21:24:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 21:24:04] Checking for apptainer binary...
[2025-11-20 21:24:04] apptainer is not installed, using version from CVMFS
[2025-11-20 21:24:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 21:24:05] 7950x-linux
[2025-11-20 21:24:05] apptainer works
[2025-11-20 21:24:05] Set ATHENA_PROC_NUMBER=8
[2025-11-20 21:24:05] Set ATHENA_CORE_NUMBER=8
[2025-11-20 21:24:05] Starting ATLAS job with PandaID=6893874812
[2025-11-20 21:24:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc501/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 11:07:46]  *** The last 200 lines of the pilot log: ***
[2025-11-21 11:07:46] 2025-11-21 19:06:55,459 | INFO     | monitor loop #3608: job 0:6893874812 is in state 'finished'
[2025-11-21 11:07:46] 2025-11-21 19:06:55,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 11:07:46] 2025-11-21 19:06:56,471 | INFO     | time since job start (49358s) is within the limit (172800.0s)
[2025-11-21 11:07:46] 2025-11-21 19:06:56,874 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 11:07:46] 2025-11-21 19:06:56,876 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.8628437500006
[2025-11-21 11:07:46] 2025-11-21 19:06:56,880 | INFO     | using path: /var/lib/multiboinc/boinc501/slots/3/PanDA_Pilot-6893874812/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 11:07:46] 2025-11-21 19:06:56,880 | INFO     | extracted standard info from prmon json
[2025-11-21 11:07:46] 2025-11-21 19:06:56,880 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 11:07:46] 2025-11-21 19:06:56,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 11:07:46] 2025-11-21 19:06:56,887 | INFO     | fitting pss+swap vs Time
[2025-11-21 11:07:46] 2025-11-21 19:06:56,888 | INFO     | sum of square deviations: 164181162060.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,899 | INFO     | sum of deviations: 988298443752.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,899 | INFO     | mean x: 1763727327.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,899 | INFO     | mean y: 2873067.3337453646
[2025-11-21 11:07:46] 2025-11-21 19:06:56,899 | INFO     | intersect: -10613990345.047043
[2025-11-21 11:07:46] 2025-11-21 19:06:56,900 | INFO     | chi2: 4.290738627920373
[2025-11-21 11:07:46] 2025-11-21 19:06:56,900 | INFO     | sum of square deviations: 161155784405.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,908 | INFO     | sum of deviations: 1191172150971.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,908 | INFO     | mean x: 1763727174.5
[2025-11-21 11:07:46] 2025-11-21 19:06:56,908 | INFO     | mean y: 2883283.6019900497
[2025-11-21 11:07:46] 2025-11-21 19:06:56,908 | INFO     | intersect: -13033587606.548615
[2025-11-21 11:07:46] 2025-11-21 19:06:56,908 | INFO     | chi2: 2.323749353336191
[2025-11-21 11:07:46] 2025-11-21 19:06:56,908 | INFO     | current chi2=2.323749353336191 (change=45.84267290915221 %)
[2025-11-21 11:07:46] 2025-11-21 19:06:56,909 | INFO     | sum of square deviations: 158167802800.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,916 | INFO     | sum of deviations: 1189171929190.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,916 | INFO     | mean x: 1763727022.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,916 | INFO     | mean y: 2883178.1201501875
[2025-11-21 11:07:46] 2025-11-21 19:06:56,916 | INFO     | intersect: -13257556862.05896
[2025-11-21 11:07:46] 2025-11-21 19:06:56,916 | INFO     | chi2: 2.2859891168010003
[2025-11-21 11:07:46] 2025-11-21 19:06:56,917 | INFO     | current chi2=2.2859891168010003 (change=1.6249702869622513 %)
[2025-11-21 11:07:46] 2025-11-21 19:06:56,917 | INFO     | right removable region: 798
[2025-11-21 11:07:46] 2025-11-21 19:06:56,917 | INFO     | sum of square deviations: 161155784405.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,924 | INFO     | sum of deviations: 769597558986.0001
[2025-11-21 11:07:46] 2025-11-21 19:06:56,924 | INFO     | mean x: 1763727479.5
[2025-11-21 11:07:46] 2025-11-21 19:06:56,924 | INFO     | mean y: 2884075.0447761193
[2025-11-21 11:07:46] 2025-11-21 19:06:56,924 | INFO     | intersect: -8419775824.823002
[2025-11-21 11:07:46] 2025-11-21 19:06:56,925 | INFO     | chi2: 2.0949000611978157
[2025-11-21 11:07:46] 2025-11-21 19:06:56,925 | INFO     | current chi2=2.0949000611978157 (change=51.17623694051092 %)
[2025-11-21 11:07:46] 2025-11-21 19:06:56,929 | INFO     | sum of square deviations: 158167802800.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,937 | INFO     | sum of deviations: 733049328161.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,937 | INFO     | mean x: 1763727632.0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,937 | INFO     | mean y: 2885938.871088861
[2025-11-21 11:07:46] 2025-11-21 19:06:56,937 | INFO     | intersect: -8171339995.919423
[2025-11-21 11:07:46] 2025-11-21 19:06:56,937 | INFO     | chi2: 2.073248388719183
[2025-11-21 11:07:46] 2025-11-21 19:06:56,937 | INFO     | current chi2=2.073248388719183 (change=1.0335420233007544 %)
[2025-11-21 11:07:46] 2025-11-21 19:06:56,937 | INFO     | left removable region: 20
[2025-11-21 11:07:46] 2025-11-21 19:06:56,938 | INFO     | sum of square deviations: 146021396454.5
[2025-11-21 11:07:46] 2025-11-21 19:06:56,944 | INFO     | sum of deviations: 892314654703.5017
[2025-11-21 11:07:46] 2025-11-21 19:06:56,945 | INFO     | mean x: 1763727601.5
[2025-11-21 11:07:46] 2025-11-21 19:06:56,945 | INFO     | mean y: 2898318.6568123396
[2025-11-21 11:07:46] 2025-11-21 19:06:56,945 | INFO     | intersect: -10774974129.74085
[2025-11-21 11:07:46] 2025-11-21 19:06:56,945 | INFO     | chi2: 0.05457236506569112
[2025-11-21 11:07:46] 2025-11-21 19:06:56,945 | INFO     | current memory leak: 6.11 B/s (using 778 data points, chi2=0.05)
[2025-11-21 11:07:46] 2025-11-21 19:06:56,946 | INFO     | could have reported an average CPU frequency of 3999 MHz (31 samples)
[2025-11-21 11:07:46] 2025-11-21 19:06:56,946 | INFO     | ..............................
[2025-11-21 11:07:46] 2025-11-21 19:06:56,946 | INFO     | . Timing measurements:
[2025-11-21 11:07:46] 2025-11-21 19:06:56,946 | INFO     | . get job = 0 s
[2025-11-21 11:07:46] 2025-11-21 19:06:56,946 | INFO     | . initial setup = 3 s
[2025-11-21 11:07:46] 2025-11-21 19:06:56,946 | INFO     | . payload setup = 5 s
[2025-11-21 11:07:46] 2025-11-21 19:06:56,946 | INFO     | . stage-in = 0 s
[2025-11-21 11:07:46] 2025-11-21 19:06:56,946 | INFO     | . payload execution = 49318 s
[2025-11-21 11:07:46] 2025-11-21 19:06:56,947 | INFO     | . stage-out = 3 s
[2025-11-21 11:07:46] 2025-11-21 19:06:56,947 | INFO     | . log creation = 0 s
[2025-11-21 11:07:46] 2025-11-21 19:06:56,947 | INFO     | ..............................
[2025-11-21 11:07:46] 2025-11-21 19:06:56,999 | INFO     | 
[2025-11-21 11:07:46] 2025-11-21 19:06:56,999 | INFO     | job summary report
[2025-11-21 11:07:46] 2025-11-21 19:06:56,999 | INFO     | --------------------------------------------------
[2025-11-21 11:07:46] 2025-11-21 19:06:56,999 | INFO     | PanDA job id: 6893874812
[2025-11-21 11:07:46] 2025-11-21 19:06:56,999 | INFO     | task id: 47523449
[2025-11-21 11:07:46] 2025-11-21 19:06:56,999 | INFO     | errors: (none)
[2025-11-21 11:07:46] 2025-11-21 19:06:56,999 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 11:07:46] 2025-11-21 19:06:56,999 | INFO     | pilot state: finished 
[2025-11-21 11:07:46] 2025-11-21 19:06:56,999 | INFO     | transexitcode: 0
[2025-11-21 11:07:46] 2025-11-21 19:06:56,999 | INFO     | exeerrorcode: 0
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | exeerrordiag: 
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | exitcode: 0
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | exitmsg: OK
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | cpuconsumptiontime: 132855 s
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | nevents: 1000
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | neventsw: 0
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | pid: 140832
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | pgrp: 140832
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | corecount: 8
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | event service: False
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | sizes: {0: 2298713, 4: 2298975, 11: 2299003, 49327: 2346901, 49332: 2355923, 49335: 2355979, 49344: 2356353}
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | --------------------------------------------------
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | 
[2025-11-21 11:07:46] 2025-11-21 19:06:57,000 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc501/slots/3
[2025-11-21 11:07:46] 2025-11-21 19:06:57,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | job 6893874812 has completed (purged errors)
[2025-11-21 11:07:46] 2025-11-21 19:06:57,029 | INFO     | overall cleanup function is called
[2025-11-21 11:07:46] 2025-11-21 19:06:58,041 | INFO     | --- collectZombieJob: --- 10, [140832]
[2025-11-21 11:07:46] 2025-11-21 19:06:58,042 | INFO     | zombie collector waiting for pid 140832
[2025-11-21 11:07:46] 2025-11-21 19:06:58,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 11:07:46] 2025-11-21 19:06:58,042 | INFO     | collected zombie processes
[2025-11-21 11:07:46] 2025-11-21 19:06:58,042 | INFO     | will attempt to kill all subprocesses of pid=140832
[2025-11-21 11:07:46] 2025-11-21 19:06:58,304 | INFO     | process IDs to be killed: [140832] (in reverse order)
[2025-11-21 11:07:46] 2025-11-21 19:06:58,428 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 11:07:46] 2025-11-21 19:06:58,428 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 11:07:46] 2025-11-21 19:06:58,433 | INFO     | did not find any defunct processes belonging to 140832
[2025-11-21 11:07:46] 2025-11-21 19:06:58,438 | INFO     | did not find any defunct processes belonging to 140832
[2025-11-21 11:07:46] 2025-11-21 19:06:58,439 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 11:07:46] 2025-11-21 19:06:58,439 | INFO     | ready for new job
[2025-11-21 11:07:46] 2025-11-21 19:06:58,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 11:07:46] 2025-11-21 19:06:58,442 | INFO     | ***************************************
[2025-11-21 11:07:46] 2025-11-21 19:06:58,442 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 11:07:46] 2025-11-21 19:06:58,442 | INFO     | ***************************************
[2025-11-21 11:07:46] 2025-11-21 19:06:58,442 | INFO     | 
[2025-11-21 11:07:46] 2025-11-21 19:06:58,446 | INFO     | architecture information:
[2025-11-21 11:07:46] 2025-11-21 19:06:58,446 | INFO     | executing command: cat /etc/os-release
[2025-11-21 11:07:46] 2025-11-21 19:06:58,468 | INFO     | cat /etc/os-release:
[2025-11-21 11:07:46] NAME="CentOS Linux"
[2025-11-21 11:07:46] VERSION="7 (Core)"
[2025-11-21 11:07:46] ID="centos"
[2025-11-21 11:07:46] ID_LIKE="rhel fedora"
[2025-11-21 11:07:46] VERSION_ID="7"
[2025-11-21 11:07:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 11:07:46] ANSI_COLOR="0;31"
[2025-11-21 11:07:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 11:07:46] HOME_URL="https://www.centos.org/"
[2025-11-21 11:07:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 11:07:46] 
[2025-11-21 11:07:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 11:07:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 11:07:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 11:07:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 11:07:46] 
[2025-11-21 11:07:46] 2025-11-21 19:06:58,468 | INFO     | ***************************************
[2025-11-21 11:07:46] 2025-11-21 19:06:58,971 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc501/slots/3
[2025-11-21 11:07:46] 2025-11-21 19:06:58,993 | INFO     | sufficient remaining disk space (199282917376 B)
[2025-11-21 11:07:46] 2025-11-21 19:06:58,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 11:07:46] 2025-11-21 19:06:58,993 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 11:07:46] 2025-11-21 19:06:58,993 | INFO     | update_server=False
[2025-11-21 11:07:46] 2025-11-21 19:06:58,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 11:07:46] 2025-11-21 19:06:58,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 11:07:46] 2025-11-21 19:06:58,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:07:46] 2025-11-21 19:06:58,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 11:07:46] 2025-11-21 19:06:58,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:07:46] 2025-11-21 19:06:58,994 | INFO     | aborting loop
[2025-11-21 11:07:46] 2025-11-21 19:06:59,454 | INFO     | all data control threads have been joined
[2025-11-21 11:07:46] 2025-11-21 19:06:59,554 | INFO     | all payload control threads have been joined
[2025-11-21 11:07:46] 2025-11-21 19:06:59,997 | INFO     | [job] retrieve thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:06:59,998 | INFO     | [job] queue monitor thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:06:59,999 | INFO     | [job] job monitor thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:00,252 | INFO     | [data] copytool_in thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:00,435 | INFO     | [payload] validate_post thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:00,459 | INFO     | [data] control thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:00,491 | INFO     | all job control threads have been joined
[2025-11-21 11:07:46] 2025-11-21 19:07:00,539 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:00,559 | INFO     | [payload] control thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:00,587 | INFO     | [job] validate thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:00,657 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:00,899 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:00,998 | INFO     | [data] copytool_out thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:01,033 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:01,344 | INFO     | [payload] failed_post thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:01,496 | INFO     | [job] control thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:02,998 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 11:07:46] 2025-11-21 19:07:29,803 | INFO     | PID=134156 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 11:07:46] 2025-11-21 19:07:29,803 | INFO     | .. there are 12 such processes running
[2025-11-21 11:07:46] 2025-11-21 19:07:29,804 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 11:07:46] 2025-11-21 19:07:29,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 11:07:46] 2025-11-21 19:07:29,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 11:07:46] 2025-11-21 19:07:40,241 | INFO     | [monitor] cgroup control has ended
[2025-11-21 11:07:46] 2025-11-21 19:07:41,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133839386306368)>', '<ExcThread(monitor, started 133838755849984)>']
[2025-11-21 11:07:46] 2025-11-21 19:07:41,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 11:07:46] 2025-11-21 19:07:41,865 | INFO     | [monitor] control thread has ended
[2025-11-21 11:07:46] 2025-11-21 19:07:46,666 | INFO     | all workflow threads have been joined
[2025-11-21 11:07:46] 2025-11-21 19:07:46,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 11:07:46] 2025-11-21 19:07:46,667 | INFO     | traces error code: 0
[2025-11-21 11:07:46] 2025-11-21 19:07:46,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 11:07:46] 2025-11-21 19:07:46,794 [wrapper] ==== pilot stdout END ====
[2025-11-21 11:07:46] 2025-11-21 19:07:46,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 11:07:46] 2025-11-21 19:07:46,801 [wrapper] pilotpid: 134156
[2025-11-21 11:07:46] 2025-11-21 19:07:46,802 [wrapper] Pilot exit status: 0
[2025-11-21 11:07:46] 2025-11-21 19:07:46,808 [wrapper] pandaids: 6893874812
[2025-11-21 11:07:46] 2025-11-21 19:07:46,855 [wrapper] cleanup supervisor_pilot 1115540 134157
[2025-11-21 11:07:46] 2025-11-21 19:07:46,863 [wrapper] Test setup, not cleaning
[2025-11-21 11:07:46] 2025-11-21 19:07:46,865 [wrapper] apfmon messages muted
[2025-11-21 11:07:46] 2025-11-21 19:07:46,867 [wrapper] ==== wrapper stdout END ====
[2025-11-21 11:07:46] 2025-11-21 19:07:46,869 [wrapper] ==== wrapper stderr END ====
[2025-11-21 11:07:46]  *** Error codes and diagnostics ***
[2025-11-21 11:07:46]     "exeErrorCode": 0,
[2025-11-21 11:07:46]     "exeErrorDiag": "",
[2025-11-21 11:07:46]     "pilotErrorCode": 0,
[2025-11-21 11:07:46]     "pilotErrorDiag": "",
[2025-11-21 11:07:47]  *** Listing of results directory ***
[2025-11-21 11:07:47] total 1314816
[2025-11-21 11:07:47] -rw-r--r-- 1 root root    576529 Nov 20 08:08 pilot3.tar.gz
[2025-11-21 11:07:47] -rwx------ 1 4871 1028     36292 Nov 20 08:28 runpilot2-wrapper.sh
[2025-11-21 11:07:47] -rw-r--r-- 1 root root      5112 Nov 20 08:28 queuedata.json
[2025-11-21 11:07:47] -rw-r--r-- 1 root root       100 Nov 20 21:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 11:07:47] -rwxr-xr-x 1 root root      7986 Nov 20 21:24 run_atlas
[2025-11-21 11:07:47] -rw-r--r-- 1 root root       105 Nov 20 21:24 job.xml
[2025-11-21 11:07:47] -rw-r--r-- 2 root root     15847 Nov 20 21:24 start_atlas.sh
[2025-11-21 11:07:47] drwxrwx--x 2 root root      4096 Nov 20 21:24 shared
[2025-11-21 11:07:47] -rw-r--r-- 2 root root    590100 Nov 20 21:24 input.tar.gz
[2025-11-21 11:07:47] -rw-r--r-- 2 root root 410297825 Nov 20 21:24 EVNT.47493127._000740.pool.root.1
[2025-11-21 11:07:47] -rw-r--r-- 1 root root         0 Nov 20 21:24 boinc_lockfile
[2025-11-21 11:07:47] -rw-r--r-- 1 root root      2781 Nov 20 21:24 pandaJob.out
[2025-11-21 11:07:47] -rw------- 1 root root    989817 Nov 20 21:24 agis_schedconf.cvmfs.json
[2025-11-21 11:07:47] drwxr-xr-x 5  320  320      4096 Nov 20 21:24 pilot3
[2025-11-21 11:07:47] -rw-r--r-- 1 root root     13015 Nov 20 21:44 init_data.xml
[2025-11-21 11:07:47] -rw-r--r-- 1 root root       533 Nov 21 11:00 boinc_task_state.xml
[2025-11-21 11:07:47] -rw------- 1 root root 914088176 Nov 21 11:06 HITS.47523449._007391.pool.root.1
[2025-11-21 11:07:47] -rw------- 1 root root      1046 Nov 21 11:06 memory_monitor_summary.json
[2025-11-21 11:07:47] -rw------- 1 root root   1526164 Nov 21 11:06 agis_ddmendpoints.agis.ALL.json
[2025-11-21 11:07:47] -rw------- 1 root root   1995987 Nov 21 11:06 log.47523449._007391.job.log.tgz.1
[2025-11-21 11:07:47] -rw------- 1 root root      8572 Nov 21 11:06 heartbeat.json
[2025-11-21 11:07:47] -rw------- 1 root root        95 Nov 21 11:07 pilot_heartbeat.json
[2025-11-21 11:07:47] -rw-r--r-- 1 root root        29 Nov 21 11:07 wrapper_checkpoint.txt
[2025-11-21 11:07:47] -rw-r--r-- 1 root root      8192 Nov 21 11:07 boinc_mmap_file
[2025-11-21 11:07:47] -rw------- 1 root root      4838 Nov 21 11:07 pilotlog.txt
[2025-11-21 11:07:47] -rw------- 1 root root   7030678 Nov 21 11:07 log.47523449._007391.job.log.1
[2025-11-21 11:07:47] -rw------- 1 root root       353 Nov 21 11:07 output.list
[2025-11-21 11:07:47] -rw-r--r-- 1 root root       620 Nov 21 11:07 runtime_log
[2025-11-21 11:07:47] -rw------- 1 root root   9041920 Nov 21 11:07 result.tar.gz
[2025-11-21 11:07:47] -rw------- 1 root root       659 Nov 21 11:07 vKsLDmBhMg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxIIKDma81tun.diag
[2025-11-21 11:07:47] -rw-r--r-- 1 root root      9019 Nov 21 11:07 runtime_log.err
[2025-11-21 11:07:47] -rw-r--r-- 1 root root     21377 Nov 21 11:07 stderr.txt
[2025-11-21 11:07:47] HITS file was successfully produced:
[2025-11-21 11:07:47] -rw------- 1 root root 914088176 Nov 21 11:06 shared/HITS.pool.root.1
[2025-11-21 11:07:47]  *** Contents of shared directory: ***
[2025-11-21 11:07:47] total 1302788
[2025-11-21 11:07:47] -rw-r--r-- 2 root root     15847 Nov 20 21:24 start_atlas.sh
[2025-11-21 11:07:47] -rw-r--r-- 2 root root    590100 Nov 20 21:24 input.tar.gz
[2025-11-21 11:07:47] -rw-r--r-- 2 root root 410297825 Nov 20 21:24 ATLAS.root_0
[2025-11-21 11:07:47] -rw------- 1 root root 914088176 Nov 21 11:06 HITS.pool.root.1
[2025-11-21 11:07:47] -rw------- 1 root root   9041920 Nov 21 11:07 result.tar.gz
11:07:48 (129987): run_atlas exited; CPU time 133201.321247
11:07:48 (129987): called boinc_finish(0)

</stderr_txt>
]]>

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