Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:20:21 (4148569): wrapper (7.7.26015): starting
22:20:21 (4148569): wrapper: running run_atlas (--nthreads 10)
[2025-11-20 22:20:21] Arguments: --nthreads 10
[2025-11-20 22:20:21] Threads: 10
[2025-11-20 22:20:21] Checking for CVMFS
[2025-11-20 22:20:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 22:20:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 22:20:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 22:20:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 22:20:21] 2.13.3.0 12977 22300 355608 153106 2 196 25474024 32935936 17577 16776704 0 105839518 99.526 122539030 32298 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-20 22:20:21] CVMFS is ok
[2025-11-20 22:20:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 22:20:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 22:20:21] Further information can be found at the LHC@home message board.
[2025-11-20 22:20:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 22:20:21] Checking for apptainer binary...
[2025-11-20 22:20:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 22:20:21] Running /usr/bin/apptainer --version
[2025-11-20 22:20:21] apptainer version 1.4.4-1.el9
[2025-11-20 22:20:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 22:20:21] c6-12-29-1.aglt2.org
[2025-11-20 22:20:21] apptainer works
[2025-11-20 22:20:21] Set ATHENA_PROC_NUMBER=10
[2025-11-20 22:20:21] Set ATHENA_CORE_NUMBER=10
[2025-11-20 22:20:21] Starting ATLAS job with PandaID=6893851945
[2025-11-20 22:20:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 10:34:16]  *** The last 200 lines of the pilot log: ***
[2025-11-21 10:34:16] 2025-11-21 15:33:42,689 | INFO     | fitting pss+swap vs Time
[2025-11-21 10:34:16] 2025-11-21 15:33:42,690 | INFO     | sum of square deviations: 116217183934.77368
[2025-11-21 10:34:16] 2025-11-21 15:33:42,701 | INFO     | sum of deviations: 1079024315644.1906
[2025-11-21 10:34:16] 2025-11-21 15:33:42,701 | INFO     | mean x: 1763717222.9070735
[2025-11-21 10:34:16] 2025-11-21 15:33:42,702 | INFO     | mean y: 3147546.9431345356
[2025-11-21 10:34:16] 2025-11-21 15:33:42,702 | INFO     | intersect: -16372174113.795773
[2025-11-21 10:34:16] 2025-11-21 15:33:42,703 | INFO     | chi2: 8.7346466848015
[2025-11-21 10:34:16] 2025-11-21 15:33:42,703 | INFO     | sum of square deviations: 113816423386.46198
[2025-11-21 10:34:16] 2025-11-21 15:33:42,714 | INFO     | sum of deviations: 1355059831086.7903
[2025-11-21 10:34:16] 2025-11-21 15:33:42,714 | INFO     | mean x: 1763717070.420391
[2025-11-21 10:34:16] 2025-11-21 15:33:42,714 | INFO     | mean y: 3165078.3296089387
[2025-11-21 10:34:16] 2025-11-21 15:33:42,714 | INFO     | intersect: -20995053670.942898
[2025-11-21 10:34:16] 2025-11-21 15:33:42,715 | INFO     | chi2: 5.299339007350392
[2025-11-21 10:34:16] 2025-11-21 15:33:42,715 | INFO     | current chi2=5.299339007350392 (change=39.32966954952658 %)
[2025-11-21 10:34:16] 2025-11-21 15:33:42,716 | INFO     | sum of square deviations: 111448922358.75893
[2025-11-21 10:34:16] 2025-11-21 15:33:42,727 | INFO     | sum of deviations: 1527856753383.7607
[2025-11-21 10:34:16] 2025-11-21 15:33:42,728 | INFO     | mean x: 1763716917.9324894
[2025-11-21 10:34:16] 2025-11-21 15:33:42,728 | INFO     | mean y: 3176187.265822785
[2025-11-21 10:34:16] 2025-11-21 15:33:42,728 | INFO     | intersect: -24175674061.693676
[2025-11-21 10:34:16] 2025-11-21 15:33:42,729 | INFO     | chi2: 3.549255620171007
[2025-11-21 10:34:16] 2025-11-21 15:33:42,729 | INFO     | current chi2=3.549255620171007 (change=33.024559945154486 %)
[2025-11-21 10:34:16] 2025-11-21 15:33:42,730 | INFO     | sum of square deviations: 109113927534.67
[2025-11-21 10:34:16] 2025-11-21 15:33:42,739 | INFO     | sum of deviations: 1513904878808.1523
[2025-11-21 10:34:16] 2025-11-21 15:33:42,739 | INFO     | mean x: 1763716765.4263456
[2025-11-21 10:34:16] 2025-11-21 15:33:42,739 | INFO     | mean y: 3175272.550991501
[2025-11-21 10:34:16] 2025-11-21 15:33:42,740 | INFO     | intersect: -24467572654.346584
[2025-11-21 10:34:16] 2025-11-21 15:33:42,740 | INFO     | chi2: 3.5325472810570875
[2025-11-21 10:34:16] 2025-11-21 15:33:42,741 | INFO     | current chi2=3.5325472810570875 (change=0.4707561500773092 %)
[2025-11-21 10:34:16] 2025-11-21 15:33:42,741 | INFO     | right removable region: 705
[2025-11-21 10:34:16] 2025-11-21 15:33:42,742 | INFO     | sum of square deviations: 113815584636.4619
[2025-11-21 10:34:16] 2025-11-21 15:33:42,752 | INFO     | sum of deviations: 799784037449.1166
[2025-11-21 10:34:16] 2025-11-21 15:33:42,753 | INFO     | mean x: 1763717375.420391
[2025-11-21 10:34:16] 2025-11-21 15:33:42,753 | INFO     | mean y: 3165267.581005587
[2025-11-21 10:34:16] 2025-11-21 15:33:42,753 | INFO     | intersect: -12390506547.56146
[2025-11-21 10:34:16] 2025-11-21 15:33:42,754 | INFO     | chi2: 5.495554564055177
[2025-11-21 10:34:16] 2025-11-21 15:33:42,754 | INFO     | current chi2=5.495554564055177 (change=37.0832643566731 %)
[2025-11-21 10:34:16] 2025-11-21 15:33:42,755 | INFO     | sum of square deviations: 111447550237.04834
[2025-11-21 10:34:16] 2025-11-21 15:33:42,765 | INFO     | sum of deviations: 730612986525.7714
[2025-11-21 10:34:16] 2025-11-21 15:33:42,766 | INFO     | mean x: 1763717527.925457
[2025-11-21 10:34:16] 2025-11-21 15:33:42,766 | INFO     | mean y: 3169721.0900140647
[2025-11-21 10:34:16] 2025-11-21 15:33:42,766 | INFO     | intersect: -11559174428.464052
[2025-11-21 10:34:16] 2025-11-21 15:33:42,767 | INFO     | chi2: 5.386748870742339
[2025-11-21 10:34:16] 2025-11-21 15:33:42,767 | INFO     | current chi2=5.386748870742339 (change=1.9798855974336786 %)
[2025-11-21 10:34:16] 2025-11-21 15:33:42,767 | INFO     | left removable region: 20
[2025-11-21 10:34:16] 2025-11-21 15:33:42,768 | INFO     | sum of square deviations: 99662603197.21141
[2025-11-21 10:34:16] 2025-11-21 15:33:42,778 | INFO     | sum of deviations: 1072695545026.3142
[2025-11-21 10:34:16] 2025-11-21 15:33:42,778 | INFO     | mean x: 1763717344.948905
[2025-11-21 10:34:16] 2025-11-21 15:33:42,778 | INFO     | mean y: 3204200.7518248176
[2025-11-21 10:34:16] 2025-11-21 15:33:42,778 | INFO     | intersect: -18980162457.538177
[2025-11-21 10:34:16] 2025-11-21 15:33:42,779 | INFO     | chi2: 0.07140616419359518
[2025-11-21 10:34:16] 2025-11-21 15:33:42,779 | INFO     | current memory leak: 10.76 B/s (using 685 data points, chi2=0.07)
[2025-11-21 10:34:16] 2025-11-21 15:33:42,780 | INFO     | could have reported an average CPU frequency of 2667 MHz (27 samples)
[2025-11-21 10:34:16] 2025-11-21 15:33:42,781 | INFO     | ..............................
[2025-11-21 10:34:16] 2025-11-21 15:33:42,781 | INFO     | . Timing measurements:
[2025-11-21 10:34:16] 2025-11-21 15:33:42,781 | INFO     | . get job = 0 s
[2025-11-21 10:34:16] 2025-11-21 15:33:42,781 | INFO     | . initial setup = 2 s
[2025-11-21 10:34:16] 2025-11-21 15:33:42,781 | INFO     | . payload setup = 6 s
[2025-11-21 10:34:16] 2025-11-21 15:33:42,781 | INFO     | . stage-in = 0 s
[2025-11-21 10:34:16] 2025-11-21 15:33:42,781 | INFO     | . payload execution = 43950 s
[2025-11-21 10:34:16] 2025-11-21 15:33:42,781 | INFO     | . stage-out = 4 s
[2025-11-21 10:34:16] 2025-11-21 15:33:42,781 | INFO     | . log creation = 0 s
[2025-11-21 10:34:16] 2025-11-21 15:33:42,781 | INFO     | ..............................
[2025-11-21 10:34:16] 2025-11-21 15:33:42,952 | INFO     | 
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | job summary report
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | --------------------------------------------------
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | PanDA job id: 6893851945
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | task id: 47523449
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | errors: (none)
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | pilot state: finished 
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | transexitcode: 0
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | exeerrorcode: 0
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | exeerrordiag: 
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | exitcode: 0
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | exitmsg: OK
[2025-11-21 10:34:16] 2025-11-21 15:33:42,953 | INFO     | cpuconsumptiontime: 258545 s
[2025-11-21 10:34:16] 2025-11-21 15:33:42,954 | INFO     | nevents: 1000
[2025-11-21 10:34:16] 2025-11-21 15:33:42,954 | INFO     | neventsw: 0
[2025-11-21 10:34:16] 2025-11-21 15:33:42,954 | INFO     | pid: 4166067
[2025-11-21 10:34:16] 2025-11-21 15:33:42,954 | INFO     | pgrp: 4166067
[2025-11-21 10:34:16] 2025-11-21 15:33:42,954 | INFO     | corecount: 10
[2025-11-21 10:34:16] 2025-11-21 15:33:42,954 | INFO     | event service: False
[2025-11-21 10:34:16] 2025-11-21 15:33:42,954 | INFO     | sizes: {0: 2297979, 1: 2298835, 6: 2299097, 12: 2299125, 43960: 2344519, 43965: 2353513, 43967: 2353697, 43973: 2353943}
[2025-11-21 10:34:16] 2025-11-21 15:33:42,954 | INFO     | --------------------------------------------------
[2025-11-21 10:34:16] 2025-11-21 15:33:42,954 | INFO     | 
[2025-11-21 10:34:16] 2025-11-21 15:33:42,954 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-21 10:34:16] 2025-11-21 15:33:42,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,981 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,981 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,982 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,983 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 10:34:16] 2025-11-21 15:33:42,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,983 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 10:34:16] 2025-11-21 15:33:42,984 | INFO     | job 6893851945 has completed (purged errors)
[2025-11-21 10:34:16] 2025-11-21 15:33:42,984 | INFO     | overall cleanup function is called
[2025-11-21 10:34:16] 2025-11-21 15:33:44,002 | INFO     | --- collectZombieJob: --- 10, [4166067]
[2025-11-21 10:34:16] 2025-11-21 15:33:44,003 | INFO     | zombie collector waiting for pid 4166067
[2025-11-21 10:34:16] 2025-11-21 15:33:44,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 10:34:16] 2025-11-21 15:33:44,003 | INFO     | collected zombie processes
[2025-11-21 10:34:16] 2025-11-21 15:33:44,003 | INFO     | will attempt to kill all subprocesses of pid=4166067
[2025-11-21 10:34:16] 2025-11-21 15:33:44,657 | INFO     | process IDs to be killed: [4166067] (in reverse order)
[2025-11-21 10:34:16] 2025-11-21 15:33:44,807 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 10:34:16] 2025-11-21 15:33:44,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 10:34:16] 2025-11-21 15:33:44,827 | INFO     | did not find any defunct processes belonging to 4166067
[2025-11-21 10:34:16] 2025-11-21 15:33:44,847 | INFO     | did not find any defunct processes belonging to 4166067
[2025-11-21 10:34:16] 2025-11-21 15:33:44,848 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 10:34:16] 2025-11-21 15:33:44,848 | INFO     | ready for new job
[2025-11-21 10:34:16] 2025-11-21 15:33:44,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 10:34:16] 2025-11-21 15:33:44,852 | INFO     | ***************************************
[2025-11-21 10:34:16] 2025-11-21 15:33:44,852 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 10:34:16] 2025-11-21 15:33:44,852 | INFO     | ***************************************
[2025-11-21 10:34:16] 2025-11-21 15:33:44,852 | INFO     | 
[2025-11-21 10:34:16] 2025-11-21 15:33:44,857 | INFO     | architecture information:
[2025-11-21 10:34:16] 2025-11-21 15:33:44,858 | INFO     | executing command: cat /etc/os-release
[2025-11-21 10:34:16] 2025-11-21 15:33:44,872 | INFO     | cat /etc/os-release:
[2025-11-21 10:34:16] NAME="CentOS Linux"
[2025-11-21 10:34:16] VERSION="7 (Core)"
[2025-11-21 10:34:16] ID="centos"
[2025-11-21 10:34:16] ID_LIKE="rhel fedora"
[2025-11-21 10:34:16] VERSION_ID="7"
[2025-11-21 10:34:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 10:34:16] ANSI_COLOR="0;31"
[2025-11-21 10:34:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 10:34:16] HOME_URL="https://www.centos.org/"
[2025-11-21 10:34:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 10:34:16] 
[2025-11-21 10:34:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 10:34:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 10:34:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 10:34:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 10:34:16] 
[2025-11-21 10:34:16] 2025-11-21 15:33:44,873 | INFO     | ***************************************
[2025-11-21 10:34:16] 2025-11-21 15:33:45,375 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-21 10:34:16] 2025-11-21 15:33:45,391 | INFO     | sufficient remaining disk space (85086699520 B)
[2025-11-21 10:34:16] 2025-11-21 15:33:45,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 10:34:16] 2025-11-21 15:33:45,392 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 10:34:16] 2025-11-21 15:33:45,392 | INFO     | update_server=False
[2025-11-21 10:34:16] 2025-11-21 15:33:45,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 10:34:16] 2025-11-21 15:33:45,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 10:34:16] 2025-11-21 15:33:45,393 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 10:34:16] 2025-11-21 15:33:45,393 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 10:34:16] 2025-11-21 15:33:45,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:34:16] 2025-11-21 15:33:45,393 | INFO     | will abort loop
[2025-11-21 10:34:16] 2025-11-21 15:33:45,841 | INFO     | all payload control threads have been joined
[2025-11-21 10:34:16] 2025-11-21 15:33:46,398 | INFO     | [job] retrieve thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:46,400 | INFO     | [job] job monitor thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:46,421 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:46,451 | INFO     | all data control threads have been joined
[2025-11-21 10:34:16] 2025-11-21 15:33:46,478 | INFO     | [data] copytool_in thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:46,611 | INFO     | all job control threads have been joined
[2025-11-21 10:34:16] 2025-11-21 15:33:46,837 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:46,846 | INFO     | [payload] control thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:46,938 | INFO     | [payload] validate_post thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:46,943 | INFO     | [payload] failed_post thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:47,045 | INFO     | [job] validate thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:47,268 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:47,292 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:47,397 | INFO     | [data] copytool_out thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:47,456 | INFO     | [data] control thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:47,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 10:34:16] 2025-11-21 15:33:47,619 | INFO     | [job] control thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:47,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:34:16] 2025-11-21 15:33:48,890 | INFO     | [job] queue monitor thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:49,885 | INFO     | [monitor] cgroup control has ended
[2025-11-21 10:34:16] 2025-11-21 15:33:51,476 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 10:34:16] 2025-11-21 15:33:53,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820165449536)>', '<ExcThread(monitor, started 139819799783168)>']
[2025-11-21 10:34:16] 2025-11-21 15:33:58,448 | INFO     | all workflow threads have been joined
[2025-11-21 10:34:16] 2025-11-21 15:33:58,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 10:34:16] 2025-11-21 15:33:58,448 | INFO     | traces error code: 0
[2025-11-21 10:34:16] 2025-11-21 15:33:58,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 10:34:16] 2025-11-21 15:34:16,084 | INFO     | PID=4156078 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 10:34:16] 2025-11-21 15:34:16,085 | INFO     | .. there are 47 such processes running
[2025-11-21 10:34:16] 2025-11-21 15:34:16,085 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 10:34:16] 2025-11-21 15:34:16,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 10:34:16] 2025-11-21 15:34:16,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 10:34:16] 2025-11-21 15:34:16,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 10:34:16] 2025-11-21 15:34:16,085 | INFO     | [monitor] control thread has ended
[2025-11-21 10:34:16] 2025-11-21 15:34:16,250 [wrapper] ==== pilot stdout END ====
[2025-11-21 10:34:16] 2025-11-21 15:34:16,253 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 10:34:16] 2025-11-21 15:34:16,255 [wrapper] pilotpid: 4156078
[2025-11-21 10:34:16] 2025-11-21 15:34:16,258 [wrapper] Pilot exit status: 0
[2025-11-21 10:34:16] 2025-11-21 15:34:16,267 [wrapper] pandaids: 6893851945
[2025-11-21 10:34:16] 2025-11-21 15:34:16,371 [wrapper] cleanup supervisor_pilot 2747854 4156079
[2025-11-21 10:34:16] 2025-11-21 15:34:16,374 [wrapper] Test setup, not cleaning
[2025-11-21 10:34:16] 2025-11-21 15:34:16,377 [wrapper] apfmon messages muted
[2025-11-21 10:34:16] 2025-11-21 15:34:16,380 [wrapper] ==== wrapper stdout END ====
[2025-11-21 10:34:16] 2025-11-21 15:34:16,382 [wrapper] ==== wrapper stderr END ====
[2025-11-21 10:34:16]  *** Error codes and diagnostics ***
[2025-11-21 10:34:16]     "exeErrorCode": 0,
[2025-11-21 10:34:16]     "exeErrorDiag": "",
[2025-11-21 10:34:16]     "pilotErrorCode": 0,
[2025-11-21 10:34:16]     "pilotErrorDiag": "",
[2025-11-21 10:34:16]  *** Listing of results directory ***
[2025-11-21 10:34:16] total 1309280
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-21 10:34:16] -rwx------. 1 boincer umatlas     36292 Nov 20 06:43 runpilot2-wrapper.sh
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:43 queuedata.json
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas       100 Nov 20 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 10:34:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 22:20 run_atlas
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas       105 Nov 20 22:20 job.xml
[2025-11-21 10:34:16] -rw-r--r--. 2 boincer umatlas 411328487 Nov 20 22:20 EVNT.47493127._000359.pool.root.1
[2025-11-21 10:34:16] -rw-r--r--. 2 boincer umatlas    590098 Nov 20 22:20 input.tar.gz
[2025-11-21 10:34:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 22:20 start_atlas.sh
[2025-11-21 10:34:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 22:20 shared
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas         0 Nov 20 22:20 boinc_lockfile
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas      2786 Nov 20 22:20 pandaJob.out
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas        57 Nov 20 22:20 setup.sh.local
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas    989817 Nov 20 22:20 agis_schedconf.cvmfs.json
[2025-11-21 10:34:16] drwx------. 5 boincer umatlas      4096 Nov 20 22:20 pilot3
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas       533 Nov 21 10:21 boinc_task_state.xml
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas      6881 Nov 21 10:29 init_data.xml
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas 909849025 Nov 21 10:32 HITS.47523449._003590.pool.root.1
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas      1052 Nov 21 10:33 memory_monitor_summary.json
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas   1526164 Nov 21 10:33 agis_ddmendpoints.agis.ALL.json
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas   2166295 Nov 21 10:33 log.47523449._003590.job.log.tgz.1
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas        95 Nov 21 10:33 pilot_heartbeat.json
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas      8623 Nov 21 10:33 heartbeat.json
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 10:34 boinc_mmap_file
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas        29 Nov 21 10:34 wrapper_checkpoint.txt
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas       823 Nov 21 10:34 pilotlog.txt
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas   5635063 Nov 21 10:34 log.47523449._003590.job.log.1
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas       353 Nov 21 10:34 output.list
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas       620 Nov 21 10:34 runtime_log
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas   7823360 Nov 21 10:34 result.tar.gz
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas      9355 Nov 21 10:34 runtime_log.err
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas       662 Nov 21 10:34 j1lNDmUFIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCfHKDmZTtgDo.diag
[2025-11-21 10:34:16] -rw-r--r--. 1 boincer umatlas     21163 Nov 21 10:34 stderr.txt
[2025-11-21 10:34:16] HITS file was successfully produced:
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas 909849025 Nov 21 10:32 shared/HITS.pool.root.1
[2025-11-21 10:34:16]  *** Contents of shared directory: ***
[2025-11-21 10:34:16] total 1298460
[2025-11-21 10:34:16] -rw-r--r--. 2 boincer umatlas 411328487 Nov 20 22:20 ATLAS.root_0
[2025-11-21 10:34:16] -rw-r--r--. 2 boincer umatlas    590098 Nov 20 22:20 input.tar.gz
[2025-11-21 10:34:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 22:20 start_atlas.sh
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas 909849025 Nov 21 10:32 HITS.pool.root.1
[2025-11-21 10:34:16] -rw-------. 1 boincer umatlas   7823360 Nov 21 10:34 result.tar.gz
10:34:18 (4148569): run_atlas exited; CPU time 260276.556728
10:34:18 (4148569): called boinc_finish(0)

</stderr_txt>
]]>

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