Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:54:16 (3673908): wrapper (7.7.26015): starting
08:54:16 (3673908): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 08:54:16] Arguments: --nthreads 8
[2025-11-21 08:54:16] Threads: 8
[2025-11-21 08:54:16] Checking for CVMFS
[2025-11-21 08:54:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 08:54:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 08:54:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 08:54:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 08:54:16] 2.13.2.0 7688 25796 172828 153129 1 81 22785468 39288832 3768 16776704 0 14667734 99.670 10143460 30426 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 08:54:16] CVMFS is ok
[2025-11-21 08:54:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 08:54:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 08:54:16] Further information can be found at the LHC@home message board.
[2025-11-21 08:54:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 08:54:16] Checking for apptainer binary...
[2025-11-21 08:54:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 08:54:16] Running /usr/bin/apptainer --version
[2025-11-21 08:54:16] apptainer version 1.4.4-1.el9
[2025-11-21 08:54:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 08:54:16] c-210-1.aglt2.org
[2025-11-21 08:54:16] apptainer works
[2025-11-21 08:54:16] Set ATHENA_PROC_NUMBER=8
[2025-11-21 08:54:16] Set ATHENA_CORE_NUMBER=8
[2025-11-21 08:54:16] Starting ATLAS job with PandaID=6893874255
[2025-11-21 08:54:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 18:39:23]  *** The last 200 lines of the pilot log: ***
[2025-11-22 18:39:23] 2025-11-22 23:38:12,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 18:39:23] 2025-11-22 23:38:12,286 | INFO     | time since job start (121425s) is within the limit (172800.0s)
[2025-11-22 18:39:23] 2025-11-22 23:38:14,297 | INFO     | time since job start (121427s) is within the limit (172800.0s)
[2025-11-22 18:39:23] 2025-11-22 23:38:14,573 | INFO     | monitor loop #7147: job 0:6893874255 is in state 'finished'
[2025-11-22 18:39:23] 2025-11-22 23:38:14,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 18:39:23] 2025-11-22 23:38:16,312 | INFO     | time since job start (121429s) is within the limit (172800.0s)
[2025-11-22 18:39:23] 2025-11-22 23:38:17,077 | INFO     | monitor loop #7148: job 0:6893874255 is in state 'finished'
[2025-11-22 18:39:23] 2025-11-22 23:38:17,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 18:39:23] 2025-11-22 23:38:18,319 | INFO     | time since job start (121431s) is within the limit (172800.0s)
[2025-11-22 18:39:23] 2025-11-22 23:38:19,585 | INFO     | monitor loop #7149: job 0:6893874255 is in state 'finished'
[2025-11-22 18:39:23] 2025-11-22 23:38:19,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 18:39:23] 2025-11-22 23:38:20,325 | INFO     | time since job start (121433s) is within the limit (172800.0s)
[2025-11-22 18:39:23] 2025-11-22 23:38:21,849 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 18:39:23] 2025-11-22 23:38:21,861 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8651750000004
[2025-11-22 18:39:23] 2025-11-22 23:38:21,873 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893874255/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 18:39:23] 2025-11-22 23:38:21,874 | INFO     | extracted standard info from prmon json
[2025-11-22 18:39:23] 2025-11-22 23:38:21,874 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 18:39:23] 2025-11-22 23:38:21,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 18:39:23] 2025-11-22 23:38:21,910 | INFO     | fitting pss+swap vs Time
[2025-11-22 18:39:23] 2025-11-22 23:38:21,913 | INFO     | sum of square deviations: 2443801392067.7803
[2025-11-22 18:39:23] 2025-11-22 23:38:22,059 | INFO     | sum of deviations: 1156310518228.5564
[2025-11-22 18:39:23] 2025-11-22 23:38:22,059 | INFO     | mean x: 1763793961.256784
[2025-11-22 18:39:23] 2025-11-22 23:38:22,060 | INFO     | mean y: 3005019.940201005
[2025-11-22 18:39:23] 2025-11-22 23:38:22,064 | INFO     | intersect: -831552778.4181787
[2025-11-22 18:39:23] 2025-11-22 23:38:22,067 | INFO     | chi2: 21.000652270989878
[2025-11-22 18:39:23] 2025-11-22 23:38:22,074 | INFO     | sum of square deviations: 2425431713584.161
[2025-11-22 18:39:23] 2025-11-22 23:38:22,114 | INFO     | monitor loop #7150: job 0:6893874255 is in state 'finished'
[2025-11-22 18:39:23] 2025-11-22 23:38:22,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 18:39:23] 2025-11-22 23:38:22,332 | INFO     | time since job start (121435s) is within the limit (172800.0s)
[2025-11-22 18:39:23] 2025-11-22 23:38:22,443 | INFO     | sum of deviations: 1875938289582.3137
[2025-11-22 18:39:23] 2025-11-22 23:38:22,444 | INFO     | mean x: 1763793808.7712846
[2025-11-22 18:39:23] 2025-11-22 23:38:22,448 | INFO     | mean y: 3010992.998488665
[2025-11-22 18:39:23] 2025-11-22 23:38:22,448 | INFO     | intersect: -1361186696.951221
[2025-11-22 18:39:23] 2025-11-22 23:38:22,451 | INFO     | chi2: 17.601446357422112
[2025-11-22 18:39:23] 2025-11-22 23:38:22,451 | INFO     | current chi2=17.601446357422112 (change=16.186192074916644 %)
[2025-11-22 18:39:23] 2025-11-22 23:38:22,452 | INFO     | right removable region: 1984
[2025-11-22 18:39:23] 2025-11-22 23:38:22,458 | INFO     | sum of square deviations: 2425424725424.1636
[2025-11-22 18:39:23] 2025-11-22 23:38:22,680 | INFO     | sum of deviations: 634263073203.1335
[2025-11-22 18:39:23] 2025-11-22 23:38:22,680 | INFO     | mean x: 1763794113.7712846
[2025-11-22 18:39:23] 2025-11-22 23:38:22,680 | INFO     | mean y: 3009349.6302267
[2025-11-22 18:39:23] 2025-11-22 23:38:22,680 | INFO     | intersect: -458233361.1294445
[2025-11-22 18:39:23] 2025-11-22 23:38:22,683 | INFO     | chi2: 19.06550255023592
[2025-11-22 18:39:23] 2025-11-22 23:38:22,684 | INFO     | current chi2=19.06550255023592 (change=9.214712456465737 %)
[2025-11-22 18:39:23] 2025-11-22 23:38:22,684 | INFO     | left removable region: 10
[2025-11-22 18:39:23] 2025-11-22 23:38:22,686 | INFO     | sum of square deviations: 2385329109289.24
[2025-11-22 18:39:23] 2025-11-22 23:38:22,782 | INFO     | sum of deviations: 1369392457929.813
[2025-11-22 18:39:23] 2025-11-22 23:38:22,783 | INFO     | mean x: 1763794083.3034449
[2025-11-22 18:39:23] 2025-11-22 23:38:22,783 | INFO     | mean y: 3017523.042046606
[2025-11-22 18:39:23] 2025-11-22 23:38:22,783 | INFO     | intersect: -1009558186.3688295
[2025-11-22 18:39:23] 2025-11-22 23:38:22,786 | INFO     | chi2: 14.975466908775374
[2025-11-22 18:39:23] 2025-11-22 23:38:22,786 | INFO     | current memory leak: 0.57 B/s (using 1974 data points, chi2=14.98)
[2025-11-22 18:39:23] 2025-11-22 23:38:22,788 | INFO     | could have reported an average CPU frequency of 2601 MHz (69 samples)
[2025-11-22 18:39:23] 2025-11-22 23:38:22,788 | INFO     | ..............................
[2025-11-22 18:39:23] 2025-11-22 23:38:22,788 | INFO     | . Timing measurements:
[2025-11-22 18:39:23] 2025-11-22 23:38:22,789 | INFO     | . get job = 0 s
[2025-11-22 18:39:23] 2025-11-22 23:38:22,789 | INFO     | . initial setup = 2 s
[2025-11-22 18:39:23] 2025-11-22 23:38:22,789 | INFO     | . payload setup = 5 s
[2025-11-22 18:39:23] 2025-11-22 23:38:22,789 | INFO     | . stage-in = 0 s
[2025-11-22 18:39:23] 2025-11-22 23:38:22,789 | INFO     | . payload execution = 121373 s
[2025-11-22 18:39:23] 2025-11-22 23:38:22,789 | INFO     | . stage-out = 10 s
[2025-11-22 18:39:23] 2025-11-22 23:38:22,789 | INFO     | . log creation = 1 s
[2025-11-22 18:39:23] 2025-11-22 23:38:22,789 | INFO     | ..............................
[2025-11-22 18:39:23] 2025-11-22 23:38:22,919 | INFO     | 
[2025-11-22 18:39:23] 2025-11-22 23:38:22,919 | INFO     | job summary report
[2025-11-22 18:39:23] 2025-11-22 23:38:22,919 | INFO     | --------------------------------------------------
[2025-11-22 18:39:23] 2025-11-22 23:38:22,919 | INFO     | PanDA job id: 6893874255
[2025-11-22 18:39:23] 2025-11-22 23:38:22,919 | INFO     | task id: 47523449
[2025-11-22 18:39:23] 2025-11-22 23:38:22,919 | INFO     | errors: (none)
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | pilot state: finished 
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | transexitcode: 0
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | exeerrorcode: 0
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | exeerrordiag: 
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | exitcode: 0
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | exitmsg: OK
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | cpuconsumptiontime: 298071 s
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | nevents: 1000
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | neventsw: 0
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | pid: 3685154
[2025-11-22 18:39:23] 2025-11-22 23:38:22,920 | INFO     | pgrp: 3685154
[2025-11-22 18:39:23] 2025-11-22 23:38:22,921 | INFO     | corecount: 8
[2025-11-22 18:39:23] 2025-11-22 23:38:22,921 | INFO     | event service: False
[2025-11-22 18:39:23] 2025-11-22 23:38:22,921 | INFO     | sizes: {0: 2298635, 1: 2298834, 4: 2299096, 11: 2299124, 121380: 2380157, 121391: 2389151, 121393: 2389335, 121421: 2389581}
[2025-11-22 18:39:23] 2025-11-22 23:38:22,921 | INFO     | --------------------------------------------------
[2025-11-22 18:39:23] 2025-11-22 23:38:22,921 | INFO     | 
[2025-11-22 18:39:23] 2025-11-22 23:38:22,921 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 18:39:23] 2025-11-22 23:38:22,956 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,956 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,956 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,957 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,966 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,966 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,966 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,966 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,966 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,966 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,967 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 18:39:23] 2025-11-22 23:38:22,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 18:39:23] 2025-11-22 23:38:22,968 | INFO     | job 6893874255 has completed (purged errors)
[2025-11-22 18:39:23] 2025-11-22 23:38:22,968 | INFO     | overall cleanup function is called
[2025-11-22 18:39:23] 2025-11-22 23:38:23,847 | INFO     | PID=3677579 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 18:39:23] 2025-11-22 23:38:23,847 | INFO     | .. there are 8 such processes running
[2025-11-22 18:39:23] 2025-11-22 23:38:24,011 | INFO     | --- collectZombieJob: --- 10, [3685154]
[2025-11-22 18:39:23] 2025-11-22 23:38:24,011 | INFO     | zombie collector waiting for pid 3685154
[2025-11-22 18:39:23] 2025-11-22 23:38:24,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 18:39:23] 2025-11-22 23:38:24,011 | INFO     | collected zombie processes
[2025-11-22 18:39:23] 2025-11-22 23:38:24,011 | INFO     | will attempt to kill all subprocesses of pid=3685154
[2025-11-22 18:39:23] 2025-11-22 23:38:24,288 | INFO     | process IDs to be killed: [3685154] (in reverse order)
[2025-11-22 18:39:23] 2025-11-22 23:38:24,450 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 18:39:23] 2025-11-22 23:38:24,450 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 18:39:23] 2025-11-22 23:38:24,458 | INFO     | did not find any defunct processes belonging to 3685154
[2025-11-22 18:39:23] 2025-11-22 23:38:24,467 | INFO     | did not find any defunct processes belonging to 3685154
[2025-11-22 18:39:23] 2025-11-22 23:38:24,468 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 18:39:23] 2025-11-22 23:38:24,468 | INFO     | ready for new job
[2025-11-22 18:39:23] 2025-11-22 23:38:24,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 18:39:23] 2025-11-22 23:38:24,476 | INFO     | ***************************************
[2025-11-22 18:39:23] 2025-11-22 23:38:24,477 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 18:39:23] 2025-11-22 23:38:24,477 | INFO     | ***************************************
[2025-11-22 18:39:23] 2025-11-22 23:38:24,477 | INFO     | 
[2025-11-22 18:39:23] 2025-11-22 23:38:24,479 | INFO     | architecture information:
[2025-11-22 18:39:23] 2025-11-22 23:38:24,479 | INFO     | executing command: cat /etc/os-release
[2025-11-22 18:39:23] 2025-11-22 23:38:24,600 | INFO     | cat /etc/os-release:
[2025-11-22 18:39:23] NAME="CentOS Linux"
[2025-11-22 18:39:23] VERSION="7 (Core)"
[2025-11-22 18:39:23] ID="centos"
[2025-11-22 18:39:23] ID_LIKE="rhel fedora"
[2025-11-22 18:39:23] VERSION_ID="7"
[2025-11-22 18:39:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 18:39:23] ANSI_COLOR="0;31"
[2025-11-22 18:39:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 18:39:23] HOME_URL="https://www.centos.org/"
[2025-11-22 18:39:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 18:39:23] 
[2025-11-22 18:39:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 18:39:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 18:39:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 18:39:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 18:39:23] 
[2025-11-22 18:39:23] 2025-11-22 23:38:24,600 | INFO     | ***************************************
[2025-11-22 18:39:23] 2025-11-22 23:38:25,111 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 18:39:23] 2025-11-22 23:38:25,144 | INFO     | sufficient remaining disk space (49582964736 B)
[2025-11-22 18:39:23] 2025-11-22 23:38:25,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 18:39:23] 2025-11-22 23:38:25,145 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 18:39:23] 2025-11-22 23:38:25,145 | INFO     | update_server=False
[2025-11-22 18:39:23] 2025-11-22 23:38:25,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 18:39:23] 2025-11-22 23:38:25,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 18:39:23] 2025-11-22 23:38:25,169 | INFO     | all payload control threads have been joined
[2025-11-22 18:39:23] 2025-11-22 23:38:25,369 | INFO     | all data control threads have been joined
[2025-11-22 18:39:23] 2025-11-22 23:38:25,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:39:23] 2025-11-22 23:38:25,645 | INFO     | aborting loop
[2025-11-22 18:39:23] 2025-11-22 23:38:26,107 | INFO     | all job control threads have been joined
[2025-11-22 18:39:23] 2025-11-22 23:38:26,151 | INFO     | [job] retrieve thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:26,175 | INFO     | [payload] control thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:26,265 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:26,378 | INFO     | [data] control thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:26,651 | INFO     | [job] job monitor thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:26,718 | INFO     | [data] copytool_in thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:26,778 | INFO     | [payload] failed_post thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:27,065 | INFO     | [job] validate thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:27,113 | INFO     | [job] control thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:27,154 | INFO     | [data] copytool_out thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:27,353 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:27,393 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:27,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:27,464 | INFO     | [payload] validate_post thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:27,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:39:23] 2025-11-22 23:38:28,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 18:39:23] 2025-11-22 23:38:28,945 | INFO     | [job] queue monitor thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:32,088 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 18:39:23] 2025-11-22 23:38:56,450 | INFO     | PID=3677579 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 18:39:23] 2025-11-22 23:38:56,451 | INFO     | .. there are 8 such processes running
[2025-11-22 18:39:23] 2025-11-22 23:38:56,452 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 18:39:23] 2025-11-22 23:38:56,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 18:39:23] 2025-11-22 23:38:56,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 18:39:23] 2025-11-22 23:39:16,452 | INFO     | [monitor] cgroup control has ended
[2025-11-22 18:39:23] 2025-11-22 23:39:16,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140322821011264)>', '<ExcThread(monitor, started 140322327742208)>']
[2025-11-22 18:39:23] 2025-11-22 23:39:16,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 18:39:23] 2025-11-22 23:39:16,599 | INFO     | [monitor] control thread has ended
[2025-11-22 18:39:23] 2025-11-22 23:39:21,541 | INFO     | all workflow threads have been joined
[2025-11-22 18:39:23] 2025-11-22 23:39:21,541 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 18:39:23] 2025-11-22 23:39:21,541 | INFO     | traces error code: 0
[2025-11-22 18:39:23] 2025-11-22 23:39:21,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 18:39:23] 2025-11-22 23:39:22,195 [wrapper] ==== pilot stdout END ====
[2025-11-22 18:39:23] 2025-11-22 23:39:22,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 18:39:23] 2025-11-22 23:39:22,270 [wrapper] pilotpid: 3677579
[2025-11-22 18:39:23] 2025-11-22 23:39:22,327 [wrapper] Pilot exit status: 0
[2025-11-22 18:39:23] 2025-11-22 23:39:22,579 [wrapper] pandaids: 6893874255
[2025-11-22 18:39:23] 2025-11-22 23:39:22,855 [wrapper] cleanup supervisor_pilot 2454915 3677580
[2025-11-22 18:39:23] 2025-11-22 23:39:22,894 [wrapper] Test setup, not cleaning
[2025-11-22 18:39:23] 2025-11-22 23:39:22,910 [wrapper] apfmon messages muted
[2025-11-22 18:39:23] 2025-11-22 23:39:22,956 [wrapper] ==== wrapper stdout END ====
[2025-11-22 18:39:23] 2025-11-22 23:39:22,971 [wrapper] ==== wrapper stderr END ====
[2025-11-22 18:39:23]  *** Error codes and diagnostics ***
[2025-11-22 18:39:23]     "exeErrorCode": 0,
[2025-11-22 18:39:23]     "exeErrorDiag": "",
[2025-11-22 18:39:23]     "pilotErrorCode": 0,
[2025-11-22 18:39:23]     "pilotErrorDiag": "",
[2025-11-22 18:39:23]  *** Listing of results directory ***
[2025-11-22 18:39:24] total 1343332
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 10:07 pilot3.tar.gz
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 10:45 queuedata.json
[2025-11-22 18:39:24] -rwx------. 1 boincer umatlas     36292 Nov 20 10:45 runpilot2-wrapper.sh
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas       100 Nov 21 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 18:39:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 08:54 run_atlas
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas       105 Nov 21 08:54 job.xml
[2025-11-22 18:39:24] -rw-r--r--. 2 boincer umatlas 409822832 Nov 21 08:54 EVNT.47493127._000709.pool.root.1
[2025-11-22 18:39:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:54 start_atlas.sh
[2025-11-22 18:39:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 08:54 shared
[2025-11-22 18:39:24] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 08:54 input.tar.gz
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas         0 Nov 21 08:54 boinc_lockfile
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 08:54 pandaJob.out
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas        57 Nov 21 08:54 setup.sh.local
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas    989817 Nov 21 08:54 agis_schedconf.cvmfs.json
[2025-11-22 18:39:24] drwx------. 5 boincer umatlas      4096 Nov 21 08:54 pilot3
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas       533 Nov 22 17:53 boinc_task_state.xml
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas 926046643 Nov 22 18:36 HITS.47523449._007083.pool.root.1
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas      6661 Nov 22 18:37 init_data.xml
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas      1069 Nov 22 18:37 memory_monitor_summary.json
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas   1526164 Nov 22 18:37 agis_ddmendpoints.agis.ALL.json
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas   2805471 Nov 22 18:37 log.47523449._007083.job.log.tgz.1
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas      8637 Nov 22 18:38 heartbeat.json
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas        95 Nov 22 18:38 pilot_heartbeat.json
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas      4823 Nov 22 18:39 pilotlog.txt
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 18:39 boinc_mmap_file
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas        29 Nov 22 18:39 wrapper_checkpoint.txt
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas  15081611 Nov 22 18:39 log.47523449._007083.job.log.1
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas       353 Nov 22 18:39 output.list
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas       620 Nov 22 18:39 runtime_log
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas  17909760 Nov 22 18:39 result.tar.gz
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas      9339 Nov 22 18:39 runtime_log.err
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas       664 Nov 22 18:39 lGJODmB2Lg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8FIKDm7TlcTn.diag
[2025-11-22 18:39:24] -rw-r--r--. 1 boincer umatlas     21857 Nov 22 18:39 stderr.txt
[2025-11-22 18:39:24] HITS file was successfully produced:
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas 926046643 Nov 22 18:36 shared/HITS.pool.root.1
[2025-11-22 18:39:24]  *** Contents of shared directory: ***
[2025-11-22 18:39:24] total 1322656
[2025-11-22 18:39:24] -rw-r--r--. 2 boincer umatlas 409822832 Nov 21 08:54 ATLAS.root_0
[2025-11-22 18:39:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 08:54 start_atlas.sh
[2025-11-22 18:39:24] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 08:54 input.tar.gz
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas 926046643 Nov 22 18:36 HITS.pool.root.1
[2025-11-22 18:39:24] -rw-------. 1 boincer umatlas  17909760 Nov 22 18:39 result.tar.gz
18:39:25 (3673908): run_atlas exited; CPU time 300143.168207
18:39:25 (3673908): called boinc_finish(0)

</stderr_txt>
]]>

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