Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:43:20 (1161925): wrapper (7.7.26015): starting
12:43:20 (1161925): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 12:43:20] Arguments: --nthreads 12
[2025-11-21 12:43:20] Threads: 12
[2025-11-21 12:43:20] Checking for CVMFS
[2025-11-21 12:43:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 12:43:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 12:43:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 12:43:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 12:43:21] 2.13.2.0 2136 2461 46172 153128 1 80 3549002 4096001 730 130560 0 4207365 99.994 90481 654 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-21 12:43:21] CVMFS is ok
[2025-11-21 12:43:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 12:43:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 12:43:21] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 12:43:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 12:43:21] Further information can be found at the LHC@home message board.
[2025-11-21 12:43:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 12:43:21] Checking for apptainer binary...
[2025-11-21 12:43:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 12:43:21] Running /usr/bin/apptainer --version
[2025-11-21 12:43:21] apptainer version 1.4.3
[2025-11-21 12:43:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 12:43:21] test-run
[2025-11-21 12:43:21] apptainer works
[2025-11-21 12:43:21] Set ATHENA_PROC_NUMBER=12
[2025-11-21 12:43:21] Set ATHENA_CORE_NUMBER=12
[2025-11-21 12:43:21] Starting ATLAS job with PandaID=6893852734
[2025-11-21 12:43:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 14:39:57]  *** The last 200 lines of the pilot log: ***
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | mean y: 3195389.3421052634
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | intersect: -285661887503.0932
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | chi2: 7.871741508168353
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | sum of square deviations: 401530060.990825
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | sum of deviations: 102251625403.15599
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | mean x: 1763732314.0091743
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | mean y: 3267642.8440366974
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | intersect: -449139930847.66315
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | chi2: 5.6618734514434825
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | current chi2=5.6618734514434825 (change=28.073432726820784 %)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | sum of square deviations: 348766585.9903839
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | sum of deviations: 95153443562.0384
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | mean x: 1763732161.5096154
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | mean y: 3247130.9615384615
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | intersect: -481193046981.29736
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | chi2: 5.649934865153615
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | current chi2=5.649934865153615 (change=0.2108592922864319 %)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | right removable region: 103
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | sum of square deviations: 401529450.990825
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | sum of deviations: 31269379463.84405
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | mean x: 1763732619.0091743
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | mean y: 3308882.1559633026
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | intersect: -137348570040.96085
[2025-11-21 14:39:57] 2025-11-21 14:39:25,521 | INFO     | chi2: 4.550004011147392
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | current chi2=4.550004011147392 (change=42.19825426907195 %)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | sum of square deviations: 348765365.9903839
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | sum of deviations: -5573116376.0673065
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | mean x: 1763732771.5096154
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | mean y: 3415335.5673076925
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | intersect: 28187085362.532745
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | chi2: 2.345013579744954
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | current chi2=2.345013579744954 (change=48.461285440634086 %)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | sum of square deviations: 300838580.98989975
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | sum of deviations: -11135081312.505049
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | mean x: 1763732924.010101
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | mean y: 3432815.505050505
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | intersect: 65285317398.83291
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | chi2: 2.2996630074526343
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | current chi2=2.2996630074526343 (change=1.933915124587557 %)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | left removable region: 30
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | sum of square deviations: 120605052.0
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | sum of deviations: 8422543829.0
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | mean x: 1763733046.0
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | mean y: 3545266.98630137
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | intersect: -123168068494.19073
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | chi2: 0.0013999467704165194
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | current memory leak: 69.84 B/s (using 73 data points, chi2=0.00)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | could have reported an average CPU frequency of 4299 MHz (7 samples)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | ..............................
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | . Timing measurements:
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | . get job = 0 s
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | . initial setup = 2 s
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | . payload setup = 1 s
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | . stage-in = 0 s
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | . payload execution = 6941 s
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | . stage-out = 0 s
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | . log creation = 0 s
[2025-11-21 14:39:57] 2025-11-21 14:39:25,522 | INFO     | ..............................
[2025-11-21 14:39:57] 2025-11-21 14:39:25,546 | WARNING  | process 1172445 can no longer be monitored (due to stat problems) - aborting
[2025-11-21 14:39:57] 2025-11-21 14:39:25,546 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6893852734/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,558 | INFO     | number of running child processes to parent process 1172445: 1
[2025-11-21 14:39:57] 2025-11-21 14:39:25,558 | INFO     | maximum number of monitored processes: 18
[2025-11-21 14:39:57] 2025-11-21 14:39:25,558 | INFO     | aborting job monitoring since job object (job id=6893852734) has expired
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | 
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | job summary report
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | --------------------------------------------------
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | PanDA job id: 6893852734
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | task id: 47523449
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | errors: (none)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | pilot state: finished 
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | transexitcode: 0
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | exeerrorcode: 0
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | exeerrordiag: 
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | exitcode: 0
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | exitmsg: OK
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | cpuconsumptiontime: 73535 s
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | nevents: 1000
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | neventsw: 0
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | pid: 1172445
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | pgrp: 1172445
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | corecount: 12
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | event service: False
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | sizes: {0: 2298814, 1: 2299076, 11: 2299104, 6946: 2327336, 6947: 2327335, 6948: 2336583, 6949: 2336773}
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | --------------------------------------------------
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | 
[2025-11-21 14:39:57] 2025-11-21 14:39:25,652 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | job 6893852734 has completed (purged errors)
[2025-11-21 14:39:57] 2025-11-21 14:39:25,658 | INFO     | overall cleanup function is called
[2025-11-21 14:39:57] 2025-11-21 14:39:26,666 | INFO     | --- collectZombieJob: --- 10, [1172445]
[2025-11-21 14:39:57] 2025-11-21 14:39:26,666 | INFO     | zombie collector waiting for pid 1172445
[2025-11-21 14:39:57] 2025-11-21 14:39:26,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 14:39:57] 2025-11-21 14:39:26,666 | INFO     | collected zombie processes
[2025-11-21 14:39:57] 2025-11-21 14:39:26,666 | INFO     | will attempt to kill all subprocesses of pid=1172445
[2025-11-21 14:39:57] 2025-11-21 14:39:26,680 | INFO     | process IDs to be killed: [1172445] (in reverse order)
[2025-11-21 14:39:57] 2025-11-21 14:39:26,690 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 14:39:57] 2025-11-21 14:39:26,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 14:39:57] 2025-11-21 14:39:26,691 | INFO     | did not find any defunct processes belonging to 1172445
[2025-11-21 14:39:57] 2025-11-21 14:39:26,691 | INFO     | did not find any defunct processes belonging to 1172445
[2025-11-21 14:39:57] 2025-11-21 14:39:26,691 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 14:39:57] 2025-11-21 14:39:26,691 | INFO     | ready for new job
[2025-11-21 14:39:57] 2025-11-21 14:39:26,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 14:39:57] 2025-11-21 14:39:26,692 | INFO     | ***************************************
[2025-11-21 14:39:57] 2025-11-21 14:39:26,692 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 14:39:57] 2025-11-21 14:39:26,692 | INFO     | ***************************************
[2025-11-21 14:39:57] 2025-11-21 14:39:26,692 | INFO     | 
[2025-11-21 14:39:57] 2025-11-21 14:39:26,692 | INFO     | pilot is running in a VM
[2025-11-21 14:39:57] 2025-11-21 14:39:26,692 | INFO     | architecture information:
[2025-11-21 14:39:57] 2025-11-21 14:39:26,692 | INFO     | executing command: cat /etc/os-release
[2025-11-21 14:39:57] 2025-11-21 14:39:26,696 | INFO     | cat /etc/os-release:
[2025-11-21 14:39:57] NAME="CentOS Linux"
[2025-11-21 14:39:57] VERSION="7 (Core)"
[2025-11-21 14:39:57] ID="centos"
[2025-11-21 14:39:57] ID_LIKE="rhel fedora"
[2025-11-21 14:39:57] VERSION_ID="7"
[2025-11-21 14:39:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 14:39:57] ANSI_COLOR="0;31"
[2025-11-21 14:39:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 14:39:57] HOME_URL="https://www.centos.org/"
[2025-11-21 14:39:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 14:39:57] 
[2025-11-21 14:39:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 14:39:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 14:39:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 14:39:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 14:39:57] 
[2025-11-21 14:39:57] 2025-11-21 14:39:26,696 | INFO     | ***************************************
[2025-11-21 14:39:57] 2025-11-21 14:39:27,198 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-21 14:39:57] 2025-11-21 14:39:27,203 | INFO     | sufficient remaining disk space (66702016512 B)
[2025-11-21 14:39:57] 2025-11-21 14:39:27,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 14:39:57] 2025-11-21 14:39:27,203 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 14:39:57] 2025-11-21 14:39:27,203 | INFO     | update_server=False
[2025-11-21 14:39:57] 2025-11-21 14:39:27,203 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 14:39:57] 2025-11-21 14:39:27,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 14:39:57] 2025-11-21 14:39:27,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 14:39:57] 2025-11-21 14:39:27,204 | INFO     | aborting loop
[2025-11-21 14:39:57] 2025-11-21 14:39:27,403 | INFO     | all data control threads have been joined
[2025-11-21 14:39:57] 2025-11-21 14:39:27,423 | INFO     | all job control threads have been joined
[2025-11-21 14:39:57] 2025-11-21 14:39:27,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 14:39:57] 2025-11-21 14:39:27,994 | INFO     | all payload control threads have been joined
[2025-11-21 14:39:57] 2025-11-21 14:39:28,209 | INFO     | [job] retrieve thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:28,209 | INFO     | [job] queue monitor thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:28,209 | INFO     | [job] job monitor thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:28,408 | INFO     | [data] control thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:28,428 | INFO     | [job] control thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:28,577 | INFO     | [payload] failed_post thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:28,686 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:29,000 | INFO     | [payload] control thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:29,008 | INFO     | [payload] validate_post thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:29,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:29,191 | INFO     | [data] copytool_in thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:29,642 | INFO     | [data] copytool_out thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:29,680 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:29,680 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:29,686 | INFO     | [job] validate thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:30,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 14:39:57] 2025-11-21 14:39:33,189 | INFO     | [monitor] cgroup control has ended
[2025-11-21 14:39:57] 2025-11-21 14:39:34,667 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 14:39:57] 2025-11-21 14:39:36,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124013589014336)>', '<ExcThread(monitor, started 124013298808576)>']
[2025-11-21 14:39:57] 2025-11-21 14:39:41,458 | INFO     | all workflow threads have been joined
[2025-11-21 14:39:57] 2025-11-21 14:39:41,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 14:39:57] 2025-11-21 14:39:41,458 | INFO     | traces error code: 0
[2025-11-21 14:39:57] 2025-11-21 14:39:41,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 14:39:57] 2025-11-21 14:39:57,645 | INFO     | PID=1165787 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 14:39:57] 2025-11-21 14:39:57,645 | INFO     | .. there are 2 such processes running
[2025-11-21 14:39:57] 2025-11-21 14:39:57,646 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 14:39:57] 2025-11-21 14:39:57,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 14:39:57] 2025-11-21 14:39:57,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 14:39:57] 2025-11-21 14:39:57,646 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 14:39:57] 2025-11-21 14:39:57,646 | INFO     | [monitor] control thread has ended
[2025-11-21 14:39:57] 2025-11-21 14:39:57,671 [wrapper] ==== pilot stdout END ====
[2025-11-21 14:39:57] 2025-11-21 14:39:57,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 14:39:57] 2025-11-21 14:39:57,673 [wrapper] pilotpid: 1165787
[2025-11-21 14:39:57] 2025-11-21 14:39:57,673 [wrapper] Pilot exit status: 0
[2025-11-21 14:39:57] 2025-11-21 14:39:57,675 [wrapper] pandaids: 6893852734
[2025-11-21 14:39:57] 2025-11-21 14:39:57,682 [wrapper] cleanup supervisor_pilot 1196583 1165788
[2025-11-21 14:39:57] 2025-11-21 14:39:57,683 [wrapper] Test setup, not cleaning
[2025-11-21 14:39:57] 2025-11-21 14:39:57,683 [wrapper] apfmon messages muted
[2025-11-21 14:39:57] 2025-11-21 14:39:57,684 [wrapper] ==== wrapper stdout END ====
[2025-11-21 14:39:57] 2025-11-21 14:39:57,684 [wrapper] ==== wrapper stderr END ====
[2025-11-21 14:39:57]  *** Error codes and diagnostics ***
[2025-11-21 14:39:57]     "exeErrorCode": 0,
[2025-11-21 14:39:57]     "exeErrorDiag": "",
[2025-11-21 14:39:57]     "pilotErrorCode": 0,
[2025-11-21 14:39:57]     "pilotErrorDiag": "",
[2025-11-21 14:39:57]  *** Listing of results directory ***
[2025-11-21 14:39:57] total 1303356
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc    576529 Nov 20 12:07 pilot3.tar.gz
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc      5112 Nov 20 12:11 queuedata.json
[2025-11-21 14:39:57] -rwx------ 1 boinc boinc     36292 Nov 20 12:11 runpilot2-wrapper.sh
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc       100 Nov 21 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 14:39:57] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 12:43 run_atlas
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc       105 Nov 21 12:43 job.xml
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc      6943 Nov 21 12:43 init_data.xml
[2025-11-21 14:39:57] -rw-r--r-- 2 boinc boinc 409327931 Nov 21 12:43 EVNT.47493127._000399.pool.root.1
[2025-11-21 14:39:57] -rw-r--r-- 2 boinc boinc     15847 Nov 21 12:43 start_atlas.sh
[2025-11-21 14:39:57] drwxrwx--x 2 boinc boinc      4096 Nov 21 12:43 shared
[2025-11-21 14:39:57] -rw-r--r-- 2 boinc boinc    590103 Nov 21 12:43 input.tar.gz
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc         0 Nov 21 12:43 boinc_lockfile
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc      2786 Nov 21 12:43 pandaJob.out
[2025-11-21 14:39:57] -rw------- 1 boinc boinc    989817 Nov 21 12:43 agis_schedconf.cvmfs.json
[2025-11-21 14:39:57] -rw------- 1 boinc boinc   1526164 Nov 21 12:43 agis_ddmendpoints.agis.ALL.json
[2025-11-21 14:39:57] drwx------ 5 boinc boinc      4096 Nov 21 12:43 pilot3
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc       531 Nov 21 14:35 boinc_task_state.xml
[2025-11-21 14:39:57] -rw------- 1 boinc boinc 915635902 Nov 21 14:39 HITS.47523449._003986.pool.root.1
[2025-11-21 14:39:57] -rw------- 1 boinc boinc      1032 Nov 21 14:39 memory_monitor_summary.json
[2025-11-21 14:39:57] -rw------- 1 boinc boinc   1829501 Nov 21 14:39 log.47523449._003986.job.log.tgz.1
[2025-11-21 14:39:57] -rw------- 1 boinc boinc      8559 Nov 21 14:39 heartbeat.json
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc        27 Nov 21 14:39 wrapper_checkpoint.txt
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc      8192 Nov 21 14:39 boinc_mmap_file
[2025-11-21 14:39:57] -rw------- 1 boinc boinc        95 Nov 21 14:39 pilot_heartbeat.json
[2025-11-21 14:39:57] -rw------- 1 boinc boinc       822 Nov 21 14:39 pilotlog.txt
[2025-11-21 14:39:57] -rw------- 1 boinc boinc   1049587 Nov 21 14:39 log.47523449._003986.job.log.1
[2025-11-21 14:39:57] -rw------- 1 boinc boinc       353 Nov 21 14:39 output.list
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc       620 Nov 21 14:39 runtime_log
[2025-11-21 14:39:57] -rw------- 1 boinc boinc   2897920 Nov 21 14:39 result.tar.gz
[2025-11-21 14:39:57] -rw------- 1 boinc boinc       647 Nov 21 14:39 Us4LDmfgIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWjHKDmk4oUtm.diag
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc      8890 Nov 21 14:39 runtime_log.err
[2025-11-21 14:39:57] -rw-r--r-- 1 boinc boinc     21450 Nov 21 14:39 stderr.txt
[2025-11-21 14:39:57] HITS file was successfully produced:
[2025-11-21 14:39:57] -rw------- 1 boinc boinc 915635902 Nov 21 14:39 shared/HITS.pool.root.1
[2025-11-21 14:39:57]  *** Contents of shared directory: ***
[2025-11-21 14:39:57] total 1297344
[2025-11-21 14:39:57] -rw-r--r-- 2 boinc boinc 409327931 Nov 21 12:43 ATLAS.root_0
[2025-11-21 14:39:57] -rw-r--r-- 2 boinc boinc     15847 Nov 21 12:43 start_atlas.sh
[2025-11-21 14:39:57] -rw-r--r-- 2 boinc boinc    590103 Nov 21 12:43 input.tar.gz
[2025-11-21 14:39:57] -rw------- 1 boinc boinc 915635902 Nov 21 14:39 HITS.pool.root.1
[2025-11-21 14:39:57] -rw------- 1 boinc boinc   2897920 Nov 21 14:39 result.tar.gz
14:39:59 (1161925): run_atlas exited; CPU time 73480.918137
14:39:59 (1161925): called boinc_finish(0)

</stderr_txt>
]]>

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