Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:22:10 (3968516): wrapper (7.7.26015): starting
06:22:10 (3968516): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 06:22:10] Arguments: --nthreads 8
[2025-11-21 06:22:10] Threads: 8
[2025-11-21 06:22:10] Checking for CVMFS
[2025-11-21 06:22:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 06:22:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 06:22:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 06:22:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 06:22:12] 2.13.3.0 12601 22784 356360 153124 1 211 18509392 32935937 17241 16776704 0 106145528 99.467 134845960 33565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-21 06:22:12] CVMFS is ok
[2025-11-21 06:22:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 06:22:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 06:22:12] Further information can be found at the LHC@home message board.
[2025-11-21 06:22:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 06:22:12] Checking for apptainer binary...
[2025-11-21 06:22:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 06:22:12] Running /usr/bin/apptainer --version
[2025-11-21 06:22:12] apptainer version 1.4.4-1.el9
[2025-11-21 06:22:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 06:22:13] c6-12-27-4.aglt2.org
[2025-11-21 06:22:13] apptainer works
[2025-11-21 06:22:13] Set ATHENA_PROC_NUMBER=8
[2025-11-21 06:22:13] Set ATHENA_CORE_NUMBER=8
[2025-11-21 06:22:13] Starting ATLAS job with PandaID=6893847566
[2025-11-21 06:22:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 00:24:05]  *** The last 200 lines of the pilot log: ***
[2025-11-22 00:24:05] 2025-11-22 05:22:58,290 | INFO     | monitor loop #3792: job 0:6893847566 is in state 'finished'
[2025-11-22 00:24:05] 2025-11-22 05:22:58,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:24:05] 2025-11-22 05:22:59,221 | INFO     | time since job start (64801s) is within the limit (172800.0s)
[2025-11-22 00:24:05] 2025-11-22 05:22:59,221 | INFO     | 64804s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-22 00:24:05] 2025-11-22 05:23:00,796 | INFO     | monitor loop #3793: job 0:6893847566 is in state 'finished'
[2025-11-22 00:24:05] 2025-11-22 05:23:00,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:24:05] 2025-11-22 05:23:01,018 [wrapper] supervise_pilot (15 min periods counter: 73)
[2025-11-22 00:24:05] 2025-11-22 05:23:01,251 | INFO     | time since job start (64803s) is within the limit (172800.0s)
[2025-11-22 00:24:05] 2025-11-22 05:23:03,366 | INFO     | monitor loop #3794: job 0:6893847566 is in state 'finished'
[2025-11-22 00:24:05] 2025-11-22 05:23:03,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:24:05] 2025-11-22 05:23:06,091 | INFO     | monitor loop #3795: job 0:6893847566 is in state 'finished'
[2025-11-22 00:24:05] 2025-11-22 05:23:06,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:24:05] 2025-11-22 05:23:06,864 | INFO     | PID=3978479 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 00:24:05] 2025-11-22 05:23:06,864 | INFO     | .. there are 52 such processes running
[2025-11-22 00:24:05] 2025-11-22 05:23:07,866 | INFO     | time since job start (64809s) is within the limit (172800.0s)
[2025-11-22 00:24:05] 2025-11-22 05:23:08,658 | INFO     | monitor loop #3796: job 0:6893847566 is in state 'finished'
[2025-11-22 00:24:05] 2025-11-22 05:23:08,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:24:05] 2025-11-22 05:23:08,977 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 00:24:05] 2025-11-22 05:23:09,001 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2650.35525
[2025-11-22 00:24:05] 2025-11-22 05:23:09,035 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893847566/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 00:24:05] 2025-11-22 05:23:09,036 | INFO     | extracted standard info from prmon json
[2025-11-22 00:24:05] 2025-11-22 05:23:09,037 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 00:24:05] 2025-11-22 05:23:09,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 00:24:05] 2025-11-22 05:23:09,075 | INFO     | fitting pss+swap vs Time
[2025-11-22 00:24:05] 2025-11-22 05:23:09,077 | INFO     | sum of square deviations: 370408465000.5903
[2025-11-22 00:24:05] 2025-11-22 05:23:09,125 | INFO     | sum of deviations: -113441722666.05864
[2025-11-22 00:24:05] 2025-11-22 05:23:09,125 | INFO     | mean x: 1763756595.7097077
[2025-11-22 00:24:05] 2025-11-22 05:23:09,125 | INFO     | mean y: 2901575.899151744
[2025-11-22 00:24:05] 2025-11-22 05:23:09,126 | INFO     | intersect: 543071700.1985885
[2025-11-22 00:24:05] 2025-11-22 05:23:09,127 | INFO     | chi2: 26.282100147917667
[2025-11-22 00:24:05] 2025-11-22 05:23:09,133 | INFO     | sum of square deviations: 365197969708.7067
[2025-11-22 00:24:05] 2025-11-22 05:23:09,177 | INFO     | sum of deviations: 279119204058.0565
[2025-11-22 00:24:05] 2025-11-22 05:23:09,177 | INFO     | mean x: 1763756443.222538
[2025-11-22 00:24:05] 2025-11-22 05:23:09,177 | INFO     | mean y: 2913061.493371212
[2025-11-22 00:24:05] 2025-11-22 05:23:09,177 | INFO     | intersect: -1345118240.4802294
[2025-11-22 00:24:05] 2025-11-22 05:23:09,183 | INFO     | chi2: 22.169386611186123
[2025-11-22 00:24:05] 2025-11-22 05:23:09,183 | INFO     | current chi2=22.169386611186123 (change=15.648344362074864 %)
[2025-11-22 00:24:05] 2025-11-22 05:23:09,183 | INFO     | right removable region: 1055
[2025-11-22 00:24:05] 2025-11-22 05:23:09,184 | INFO     | sum of square deviations: 365196215958.7063
[2025-11-22 00:24:05] 2025-11-22 05:23:09,231 | INFO     | sum of deviations: -452062359160.9177
[2025-11-22 00:24:05] 2025-11-22 05:23:09,232 | INFO     | mean x: 1763756748.222538
[2025-11-22 00:24:05] 2025-11-22 05:23:09,232 | INFO     | mean y: 2911477.7443181816
[2025-11-22 00:24:05] 2025-11-22 05:23:09,232 | INFO     | intersect: 2186198165.133284
[2025-11-22 00:24:05] 2025-11-22 05:23:09,237 | INFO     | chi2: 23.728361242566738
[2025-11-22 00:24:05] 2025-11-22 05:23:09,238 | INFO     | current chi2=23.728361242566738 (change=9.716647037254603 %)
[2025-11-22 00:24:05] 2025-11-22 05:23:09,238 | INFO     | left removable region: 10
[2025-11-22 00:24:05] 2025-11-22 05:23:09,239 | INFO     | sum of square deviations: 353904257933.79865
[2025-11-22 00:24:05] 2025-11-22 05:23:09,280 | INFO     | sum of deviations: -70789955616.9612
[2025-11-22 00:24:05] 2025-11-22 05:23:09,284 | INFO     | mean x: 1763756717.7464116
[2025-11-22 00:24:05] 2025-11-22 05:23:09,284 | INFO     | mean y: 2927584.34354067
[2025-11-22 00:24:05] 2025-11-22 05:23:09,284 | INFO     | intersect: 355724299.7527722
[2025-11-22 00:24:05] 2025-11-22 05:23:09,286 | INFO     | chi2: 18.82559333732191
[2025-11-22 00:24:05] 2025-11-22 05:23:09,286 | INFO     | current memory leak: -0.20 B/s (using 1045 data points, chi2=18.83)
[2025-11-22 00:24:05] 2025-11-22 05:23:09,287 | INFO     | could have reported an average CPU frequency of 2660 MHz (39 samples)
[2025-11-22 00:24:05] 2025-11-22 05:23:09,287 | INFO     | ..............................
[2025-11-22 00:24:05] 2025-11-22 05:23:09,287 | INFO     | . Timing measurements:
[2025-11-22 00:24:05] 2025-11-22 05:23:09,287 | INFO     | . get job = 0 s
[2025-11-22 00:24:05] 2025-11-22 05:23:09,287 | INFO     | . initial setup = 4 s
[2025-11-22 00:24:05] 2025-11-22 05:23:09,288 | INFO     | . payload setup = 26 s
[2025-11-22 00:24:05] 2025-11-22 05:23:09,288 | INFO     | . stage-in = 0 s
[2025-11-22 00:24:05] 2025-11-22 05:23:09,288 | INFO     | . payload execution = 64678 s
[2025-11-22 00:24:05] 2025-11-22 05:23:09,288 | INFO     | . stage-out = 17 s
[2025-11-22 00:24:05] 2025-11-22 05:23:09,288 | INFO     | . log creation = 8 s
[2025-11-22 00:24:05] 2025-11-22 05:23:09,292 | INFO     | ..............................
[2025-11-22 00:24:05] 2025-11-22 05:23:09,535 | INFO     | 
[2025-11-22 00:24:05] 2025-11-22 05:23:09,535 | INFO     | job summary report
[2025-11-22 00:24:05] 2025-11-22 05:23:09,535 | INFO     | --------------------------------------------------
[2025-11-22 00:24:05] 2025-11-22 05:23:09,535 | INFO     | PanDA job id: 6893847566
[2025-11-22 00:24:05] 2025-11-22 05:23:09,535 | INFO     | task id: 47523449
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | errors: (none)
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | pilot state: finished 
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | transexitcode: 0
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | exeerrorcode: 0
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | exeerrordiag: 
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | exitcode: 0
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | exitmsg: OK
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | cpuconsumptiontime: 248302 s
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | nevents: 1000
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | neventsw: 0
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | pid: 3997453
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | pgrp: 3997453
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | corecount: 8
[2025-11-22 00:24:05] 2025-11-22 05:23:09,536 | INFO     | event service: False
[2025-11-22 00:24:05] 2025-11-22 05:23:09,537 | INFO     | sizes: {0: 2298585, 1: 2298784, 12: 2298784, 18: 2299074, 23: 2299102, 64711: 2353543, 64712: 2353670, 64731: 2362720, 64735: 2362776, 64769: 2363022}
[2025-11-22 00:24:05] 2025-11-22 05:23:09,537 | INFO     | --------------------------------------------------
[2025-11-22 00:24:05] 2025-11-22 05:23:09,537 | INFO     | 
[2025-11-22 00:24:05] 2025-11-22 05:23:09,537 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-22 00:24:05] 2025-11-22 05:23:09,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 00:24:05] 2025-11-22 05:23:09,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 00:24:05] 2025-11-22 05:23:09,693 | INFO     | job 6893847566 has completed (purged errors)
[2025-11-22 00:24:05] 2025-11-22 05:23:09,693 | INFO     | overall cleanup function is called
[2025-11-22 00:24:05] 2025-11-22 05:23:10,723 | INFO     | --- collectZombieJob: --- 10, [3997453]
[2025-11-22 00:24:05] 2025-11-22 05:23:10,723 | INFO     | zombie collector waiting for pid 3997453
[2025-11-22 00:24:05] 2025-11-22 05:23:10,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 00:24:05] 2025-11-22 05:23:10,723 | INFO     | collected zombie processes
[2025-11-22 00:24:05] 2025-11-22 05:23:10,723 | INFO     | will attempt to kill all subprocesses of pid=3997453
[2025-11-22 00:24:05] 2025-11-22 05:23:13,194 | INFO     | process IDs to be killed: [3997453] (in reverse order)
[2025-11-22 00:24:05] 2025-11-22 05:23:13,562 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 00:24:05] 2025-11-22 05:23:13,563 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 00:24:05] 2025-11-22 05:23:14,005 | INFO     | did not find any defunct processes belonging to 3997453
[2025-11-22 00:24:05] 2025-11-22 05:23:14,822 | INFO     | did not find any defunct processes belonging to 3997453
[2025-11-22 00:24:05] 2025-11-22 05:23:14,832 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 00:24:05] 2025-11-22 05:23:14,833 | INFO     | ready for new job
[2025-11-22 00:24:05] 2025-11-22 05:23:14,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 00:24:05] 2025-11-22 05:23:14,850 | INFO     | ***************************************
[2025-11-22 00:24:05] 2025-11-22 05:23:14,850 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 00:24:05] 2025-11-22 05:23:14,851 | INFO     | ***************************************
[2025-11-22 00:24:05] 2025-11-22 05:23:14,851 | INFO     | 
[2025-11-22 00:24:05] 2025-11-22 05:23:14,864 | INFO     | architecture information:
[2025-11-22 00:24:05] 2025-11-22 05:23:14,871 | INFO     | executing command: cat /etc/os-release
[2025-11-22 00:24:05] 2025-11-22 05:23:14,969 | INFO     | cat /etc/os-release:
[2025-11-22 00:24:05] NAME="CentOS Linux"
[2025-11-22 00:24:05] VERSION="7 (Core)"
[2025-11-22 00:24:05] ID="centos"
[2025-11-22 00:24:05] ID_LIKE="rhel fedora"
[2025-11-22 00:24:05] VERSION_ID="7"
[2025-11-22 00:24:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 00:24:05] ANSI_COLOR="0;31"
[2025-11-22 00:24:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 00:24:05] HOME_URL="https://www.centos.org/"
[2025-11-22 00:24:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 00:24:05] 
[2025-11-22 00:24:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 00:24:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 00:24:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 00:24:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 00:24:05] 
[2025-11-22 00:24:05] 2025-11-22 05:23:14,969 | INFO     | ***************************************
[2025-11-22 00:24:05] 2025-11-22 05:23:15,472 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-22 00:24:05] 2025-11-22 05:23:15,667 | INFO     | sufficient remaining disk space (80470867968 B)
[2025-11-22 00:24:05] 2025-11-22 05:23:15,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 00:24:05] 2025-11-22 05:23:15,668 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 00:24:05] 2025-11-22 05:23:15,668 | INFO     | update_server=False
[2025-11-22 00:24:05] 2025-11-22 05:23:15,668 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 00:24:05] 2025-11-22 05:23:15,668 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:24:05] 2025-11-22 05:23:15,669 | INFO     | aborting loop
[2025-11-22 00:24:05] 2025-11-22 05:23:15,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 00:24:05] 2025-11-22 05:23:15,941 | INFO     | all data control threads have been joined
[2025-11-22 00:24:05] 2025-11-22 05:23:16,539 | INFO     | all payload control threads have been joined
[2025-11-22 00:24:05] 2025-11-22 05:23:16,674 | INFO     | [job] retrieve thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:16,675 | INFO     | [job] job monitor thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:16,813 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:16,947 | INFO     | [data] control thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:17,035 | INFO     | [payload] failed_post thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:17,151 | INFO     | all job control threads have been joined
[2025-11-22 00:24:05] 2025-11-22 05:23:17,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 00:24:05] 2025-11-22 05:23:17,553 | INFO     | [payload] control thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:17,675 | INFO     | [data] copytool_out thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:17,831 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:17,832 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:17,837 | INFO     | [data] copytool_in thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:17,838 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:18,016 | INFO     | [job] validate thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:18,157 | INFO     | [job] control thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:18,211 | INFO     | [payload] validate_post thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:18,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:24:05] 2025-11-22 05:23:19,589 | INFO     | [job] queue monitor thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:21,393 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 00:24:05] 2025-11-22 05:23:44,132 | INFO     | PID=3978479 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 00:24:05] 2025-11-22 05:23:44,134 | INFO     | .. there are 52 such processes running
[2025-11-22 00:24:05] 2025-11-22 05:23:44,134 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 00:24:05] 2025-11-22 05:23:44,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 00:24:05] 2025-11-22 05:23:44,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 00:24:05] 2025-11-22 05:23:55,126 | INFO     | [monitor] cgroup control has ended
[2025-11-22 00:24:05] 2025-11-22 05:23:55,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538563249984)>', '<ExcThread(monitor, started 140538200172288)>']
[2025-11-22 00:24:05] 2025-11-22 05:23:55,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 00:24:05] 2025-11-22 05:23:55,249 | INFO     | [monitor] control thread has ended
[2025-11-22 00:24:05] 2025-11-22 05:24:00,198 | INFO     | all workflow threads have been joined
[2025-11-22 00:24:05] 2025-11-22 05:24:00,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 00:24:05] 2025-11-22 05:24:00,199 | INFO     | traces error code: 0
[2025-11-22 00:24:05] 2025-11-22 05:24:00,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 00:24:05] 2025-11-22 05:24:03,995 [wrapper] ==== pilot stdout END ====
[2025-11-22 00:24:05] 2025-11-22 05:24:04,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 00:24:05] 2025-11-22 05:24:04,028 [wrapper] pilotpid: 3978479
[2025-11-22 00:24:05] 2025-11-22 05:24:04,039 [wrapper] Pilot exit status: 0
[2025-11-22 00:24:05] 2025-11-22 05:24:04,126 [wrapper] pandaids: 6893847566
[2025-11-22 00:24:05] 2025-11-22 05:24:04,434 [wrapper] cleanup supervisor_pilot  134864 3978480
[2025-11-22 00:24:05] 2025-11-22 05:24:04,457 [wrapper] Test setup, not cleaning
[2025-11-22 00:24:05] 2025-11-22 05:24:04,477 [wrapper] apfmon messages muted
[2025-11-22 00:24:05] 2025-11-22 05:24:04,489 [wrapper] ==== wrapper stdout END ====
[2025-11-22 00:24:05] 2025-11-22 05:24:04,530 [wrapper] ==== wrapper stderr END ====
[2025-11-22 00:24:05]  *** Error codes and diagnostics ***
[2025-11-22 00:24:05]     "exeErrorCode": 0,
[2025-11-22 00:24:05]     "exeErrorDiag": "",
[2025-11-22 00:24:05]     "pilotErrorCode": 0,
[2025-11-22 00:24:05]     "pilotErrorDiag": "",
[2025-11-22 00:24:05]  *** Listing of results directory ***
[2025-11-22 00:24:05] total 1313816
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-22 00:24:05] -rwx------. 1 boincer umatlas     36292 Nov 20 05:24 runpilot2-wrapper.sh
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:25 queuedata.json
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas       100 Nov 21 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 00:24:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 06:22 run_atlas
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas       105 Nov 21 06:22 job.xml
[2025-11-22 00:24:05] -rw-r--r--. 2 boincer umatlas 410131197 Nov 21 06:22 EVNT.47493127._000239.pool.root.1
[2025-11-22 00:24:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 06:22 start_atlas.sh
[2025-11-22 00:24:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 06:22 shared
[2025-11-22 00:24:05] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 06:22 input.tar.gz
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas         0 Nov 21 06:22 boinc_lockfile
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 06:22 pandaJob.out
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas        57 Nov 21 06:22 setup.sh.local
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas    989817 Nov 21 06:22 agis_schedconf.cvmfs.json
[2025-11-22 00:24:05] drwx------. 5 boincer umatlas      4096 Nov 21 06:22 pilot3
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas       533 Nov 21 23:31 boinc_task_state.xml
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas 910972332 Nov 22 00:19 HITS.47523449._002383.pool.root.1
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas      6881 Nov 22 00:19 init_data.xml
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas      1058 Nov 22 00:22 memory_monitor_summary.json
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas   1526164 Nov 22 00:22 agis_ddmendpoints.agis.ALL.json
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas   2160180 Nov 22 00:22 log.47523449._002383.job.log.tgz.1
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas        95 Nov 22 00:23 pilot_heartbeat.json
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas      8628 Nov 22 00:23 heartbeat.json
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas      4824 Nov 22 00:24 pilotlog.txt
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas   7996074 Nov 22 00:24 log.47523449._002383.job.log.1
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas       353 Nov 22 00:24 output.list
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas       620 Nov 22 00:24 runtime_log
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas  10178560 Nov 22 00:24 result.tar.gz
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas      9353 Nov 22 00:24 runtime_log.err
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas       662 Nov 22 00:24 FbrKDmf1Gg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjSGKDmsWCO8n.diag
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas        29 Nov 22 00:24 wrapper_checkpoint.txt
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 00:24 boinc_mmap_file
[2025-11-22 00:24:05] -rw-r--r--. 1 boincer umatlas     21875 Nov 22 00:24 stderr.txt
[2025-11-22 00:24:05] HITS file was successfully produced:
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas 910972332 Nov 22 00:19 shared/HITS.pool.root.1
[2025-11-22 00:24:05]  *** Contents of shared directory: ***
[2025-11-22 00:24:05] total 1300688
[2025-11-22 00:24:05] -rw-r--r--. 2 boincer umatlas 410131197 Nov 21 06:22 ATLAS.root_0
[2025-11-22 00:24:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 06:22 start_atlas.sh
[2025-11-22 00:24:05] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 06:22 input.tar.gz
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas 910972332 Nov 22 00:19 HITS.pool.root.1
[2025-11-22 00:24:05] -rw-------. 1 boincer umatlas  10178560 Nov 22 00:24 result.tar.gz
00:24:07 (3968516): run_atlas exited; CPU time 250879.184237
00:24:07 (3968516): called boinc_finish(0)

</stderr_txt>
]]>

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