Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:53:34 (1485448): wrapper (7.7.26015): starting
04:53:34 (1485448): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 04:53:34] Arguments: --nthreads 8
[2025-11-21 04:53:34] Threads: 8
[2025-11-21 04:53:34] Checking for CVMFS
[2025-11-21 04:53:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 04:53:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 04:53:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 04:53:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 04:53:34] 2.13.2.0 6867 26487 252060 153118 2 81 22491271 40960000 4717 16776704 0 20279199 99.596 18784453 29153 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 04:53:34] CVMFS is ok
[2025-11-21 04:53:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 04:53:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 04:53:35] Further information can be found at the LHC@home message board.
[2025-11-21 04:53:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 04:53:35] Checking for apptainer binary...
[2025-11-21 04:53:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 04:53:35] Running /usr/bin/apptainer --version
[2025-11-21 04:53:35] apptainer version 1.4.4-1.el9
[2025-11-21 04:53:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 04:53:35] c-211-11.aglt2.org
[2025-11-21 04:53:35] apptainer works
[2025-11-21 04:53:35] Set ATHENA_PROC_NUMBER=8
[2025-11-21 04:53:35] Set ATHENA_CORE_NUMBER=8
[2025-11-21 04:53:35] Starting ATLAS job with PandaID=6893874159
[2025-11-21 04:53:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 04:30:26]  *** The last 200 lines of the pilot log: ***
[2025-11-22 04:30:26] 2025-11-22 09:29:36,715 | INFO     | preparing for final server update for job 6893874159 in state='finished'
[2025-11-22 04:30:26] 2025-11-22 09:29:36,715 | INFO     | this job has now completed (state=finished)
[2025-11-22 04:30:26] 2025-11-22 09:29:36,715 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-22 04:30:26] 2025-11-22 09:29:36,716 | INFO     | log transfer has been attempted: DONE
[2025-11-22 04:30:26] 2025-11-22 09:29:36,716 | INFO     | job 6893874159 has finished - writing final server update
[2025-11-22 04:30:26] 2025-11-22 09:29:36,716 | INFO     | total number of processed events: 1000 (read)
[2025-11-22 04:30:26] 2025-11-22 09:29:36,717 | INFO     | executing command: lscpu
[2025-11-22 04:30:26] 2025-11-22 09:29:36,778 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-22 04:30:26] 2025-11-22 09:29:37,180 | INFO     | time since job start (84952s) is within the limit (172800.0s)
[2025-11-22 04:30:26] 2025-11-22 09:29:38,708 | INFO     | monitor loop #5205: job 0:6893874159 is in state 'finished'
[2025-11-22 04:30:26] 2025-11-22 09:29:38,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:30:26] 2025-11-22 09:29:39,186 | INFO     | time since job start (84954s) is within the limit (172800.0s)
[2025-11-22 04:30:26] 2025-11-22 09:29:41,191 | INFO     | time since job start (84956s) is within the limit (172800.0s)
[2025-11-22 04:30:26] 2025-11-22 09:29:41,261 | INFO     | monitor loop #5206: job 0:6893874159 is in state 'finished'
[2025-11-22 04:30:26] 2025-11-22 09:29:41,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:30:26] 2025-11-22 09:29:43,096 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 04:30:26] 2025-11-22 09:29:43,106 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2432.0407291666675
[2025-11-22 04:30:26] 2025-11-22 09:29:43,116 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6893874159/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 04:30:26] 2025-11-22 09:29:43,117 | INFO     | extracted standard info from prmon json
[2025-11-22 04:30:26] 2025-11-22 09:29:43,117 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 04:30:26] 2025-11-22 09:29:43,117 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 04:30:26] 2025-11-22 09:29:43,140 | INFO     | fitting pss+swap vs Time
[2025-11-22 04:30:26] 2025-11-22 09:29:43,142 | INFO     | sum of square deviations: 838217070473.07
[2025-11-22 04:30:26] 2025-11-22 09:29:43,198 | INFO     | sum of deviations: 211166777172.63013
[2025-11-22 04:30:26] 2025-11-22 09:29:43,198 | INFO     | mean x: 1763761308.4027278
[2025-11-22 04:30:26] 2025-11-22 09:29:43,199 | INFO     | mean y: 2964875.0452261306
[2025-11-22 04:30:26] 2025-11-22 09:29:43,199 | INFO     | intersect: -441368465.70502204
[2025-11-22 04:30:26] 2025-11-22 09:29:43,201 | INFO     | chi2: 15.477614216740958
[2025-11-22 04:30:26] 2025-11-22 09:29:43,203 | INFO     | sum of square deviations: 829225361449.9667
[2025-11-22 04:30:26] 2025-11-22 09:29:43,213 | INFO     | time since job start (84958s) is within the limit (172800.0s)
[2025-11-22 04:30:26] 2025-11-22 09:29:43,263 | INFO     | sum of deviations: 686317406052.2383
[2025-11-22 04:30:26] 2025-11-22 09:29:43,264 | INFO     | mean x: 1763761155.9149857
[2025-11-22 04:30:26] 2025-11-22 09:29:43,264 | INFO     | mean y: 2972932.137608069
[2025-11-22 04:30:26] 2025-11-22 09:29:43,264 | INFO     | intersect: -1456823207.3661509
[2025-11-22 04:30:26] 2025-11-22 09:29:43,266 | INFO     | chi2: 12.371784274441842
[2025-11-22 04:30:26] 2025-11-22 09:29:43,266 | INFO     | current chi2=12.371784274441842 (change=20.066593589984798 %)
[2025-11-22 04:30:26] 2025-11-22 09:29:43,267 | INFO     | right removable region: 1387
[2025-11-22 04:30:26] 2025-11-22 09:29:43,269 | INFO     | sum of square deviations: 829222470049.9656
[2025-11-22 04:30:26] 2025-11-22 09:29:43,324 | INFO     | sum of deviations: -117358102683.94267
[2025-11-22 04:30:26] 2025-11-22 09:29:43,324 | INFO     | mean x: 1763761460.9149857
[2025-11-22 04:30:26] 2025-11-22 09:29:43,324 | INFO     | mean y: 2970438.70389049
[2025-11-22 04:30:26] 2025-11-22 09:29:43,324 | INFO     | intersect: 252591868.5568094
[2025-11-22 04:30:26] 2025-11-22 09:29:43,326 | INFO     | chi2: 13.660198605337245
[2025-11-22 04:30:26] 2025-11-22 09:29:43,327 | INFO     | current chi2=13.660198605337245 (change=11.7422206417185 %)
[2025-11-22 04:30:26] 2025-11-22 09:29:43,327 | INFO     | left removable region: 10
[2025-11-22 04:30:26] 2025-11-22 09:29:43,329 | INFO     | sum of square deviations: 809665077493.1863
[2025-11-22 04:30:26] 2025-11-22 09:29:43,378 | INFO     | sum of deviations: 385590781075.6553
[2025-11-22 04:30:26] 2025-11-22 09:29:43,378 | INFO     | mean x: 1763761430.4393609
[2025-11-22 04:30:26] 2025-11-22 09:29:43,378 | INFO     | mean y: 2981751.744371823
[2025-11-22 04:30:26] 2025-11-22 09:29:43,379 | INFO     | intersect: -836983026.9019586
[2025-11-22 04:30:26] 2025-11-22 09:29:43,381 | INFO     | chi2: 9.708072433175436
[2025-11-22 04:30:26] 2025-11-22 09:29:43,381 | INFO     | current memory leak: 0.48 B/s (using 1377 data points, chi2=9.71)
[2025-11-22 04:30:26] 2025-11-22 09:29:43,382 | INFO     | could have reported an average CPU frequency of 2575 MHz (50 samples)
[2025-11-22 04:30:26] 2025-11-22 09:29:43,382 | INFO     | ..............................
[2025-11-22 04:30:26] 2025-11-22 09:29:43,383 | INFO     | . Timing measurements:
[2025-11-22 04:30:26] 2025-11-22 09:29:43,383 | INFO     | . get job = 0 s
[2025-11-22 04:30:26] 2025-11-22 09:29:43,383 | INFO     | . initial setup = 2 s
[2025-11-22 04:30:26] 2025-11-22 09:29:43,383 | INFO     | . payload setup = 5 s
[2025-11-22 04:30:26] 2025-11-22 09:29:43,383 | INFO     | . stage-in = 0 s
[2025-11-22 04:30:26] 2025-11-22 09:29:43,383 | INFO     | . payload execution = 84921 s
[2025-11-22 04:30:26] 2025-11-22 09:29:43,383 | INFO     | . stage-out = 4 s
[2025-11-22 04:30:26] 2025-11-22 09:29:43,383 | INFO     | . log creation = 1 s
[2025-11-22 04:30:26] 2025-11-22 09:29:43,384 | INFO     | ..............................
[2025-11-22 04:30:26] 2025-11-22 09:29:43,496 | INFO     | 
[2025-11-22 04:30:26] 2025-11-22 09:29:43,496 | INFO     | job summary report
[2025-11-22 04:30:26] 2025-11-22 09:29:43,496 | INFO     | --------------------------------------------------
[2025-11-22 04:30:26] 2025-11-22 09:29:43,497 | INFO     | PanDA job id: 6893874159
[2025-11-22 04:30:26] 2025-11-22 09:29:43,497 | INFO     | task id: 47523449
[2025-11-22 04:30:26] 2025-11-22 09:29:43,497 | INFO     | errors: (none)
[2025-11-22 04:30:26] 2025-11-22 09:29:43,497 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 04:30:26] 2025-11-22 09:29:43,497 | INFO     | pilot state: finished 
[2025-11-22 04:30:26] 2025-11-22 09:29:43,497 | INFO     | transexitcode: 0
[2025-11-22 04:30:26] 2025-11-22 09:29:43,497 | INFO     | exeerrorcode: 0
[2025-11-22 04:30:26] 2025-11-22 09:29:43,497 | INFO     | exeerrordiag: 
[2025-11-22 04:30:26] 2025-11-22 09:29:43,497 | INFO     | exitcode: 0
[2025-11-22 04:30:26] 2025-11-22 09:29:43,498 | INFO     | exitmsg: OK
[2025-11-22 04:30:26] 2025-11-22 09:29:43,498 | INFO     | cpuconsumptiontime: 329837 s
[2025-11-22 04:30:26] 2025-11-22 09:29:43,498 | INFO     | nevents: 1000
[2025-11-22 04:30:26] 2025-11-22 09:29:43,498 | INFO     | neventsw: 0
[2025-11-22 04:30:26] 2025-11-22 09:29:43,498 | INFO     | pid: 1495551
[2025-11-22 04:30:26] 2025-11-22 09:29:43,498 | INFO     | pgrp: 1495551
[2025-11-22 04:30:26] 2025-11-22 09:29:43,498 | INFO     | corecount: 8
[2025-11-22 04:30:26] 2025-11-22 09:29:43,498 | INFO     | event service: False
[2025-11-22 04:30:26] 2025-11-22 09:29:43,498 | INFO     | sizes: {0: 2298579, 1: 2298834, 5: 2299096, 12: 2299152, 84930: 2363122, 84935: 2372116, 84936: 2372300, 84943: 2372546}
[2025-11-22 04:30:26] 2025-11-22 09:29:43,498 | INFO     | --------------------------------------------------
[2025-11-22 04:30:26] 2025-11-22 09:29:43,499 | INFO     | 
[2025-11-22 04:30:26] 2025-11-22 09:29:43,499 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-22 04:30:26] 2025-11-22 09:29:43,520 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,521 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,521 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,521 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,522 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,523 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 04:30:26] 2025-11-22 09:29:43,523 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,523 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 04:30:26] 2025-11-22 09:29:43,523 | INFO     | job 6893874159 has completed (purged errors)
[2025-11-22 04:30:26] 2025-11-22 09:29:43,523 | INFO     | overall cleanup function is called
[2025-11-22 04:30:26] 2025-11-22 09:29:44,541 | INFO     | --- collectZombieJob: --- 10, [1495551]
[2025-11-22 04:30:26] 2025-11-22 09:29:44,541 | INFO     | zombie collector waiting for pid 1495551
[2025-11-22 04:30:26] 2025-11-22 09:29:44,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 04:30:26] 2025-11-22 09:29:44,542 | INFO     | collected zombie processes
[2025-11-22 04:30:26] 2025-11-22 09:29:44,542 | INFO     | will attempt to kill all subprocesses of pid=1495551
[2025-11-22 04:30:26] 2025-11-22 09:29:44,862 | INFO     | process IDs to be killed: [1495551] (in reverse order)
[2025-11-22 04:30:26] 2025-11-22 09:29:44,966 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 04:30:26] 2025-11-22 09:29:44,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 04:30:26] 2025-11-22 09:29:44,976 | INFO     | did not find any defunct processes belonging to 1495551
[2025-11-22 04:30:26] 2025-11-22 09:29:44,985 | INFO     | did not find any defunct processes belonging to 1495551
[2025-11-22 04:30:26] 2025-11-22 09:29:44,987 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 04:30:26] 2025-11-22 09:29:44,987 | INFO     | ready for new job
[2025-11-22 04:30:26] 2025-11-22 09:29:44,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 04:30:26] 2025-11-22 09:29:44,994 | INFO     | ***************************************
[2025-11-22 04:30:26] 2025-11-22 09:29:44,994 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 04:30:26] 2025-11-22 09:29:44,994 | INFO     | ***************************************
[2025-11-22 04:30:26] 2025-11-22 09:29:44,994 | INFO     | 
[2025-11-22 04:30:26] 2025-11-22 09:29:44,997 | INFO     | architecture information:
[2025-11-22 04:30:26] 2025-11-22 09:29:44,998 | INFO     | executing command: cat /etc/os-release
[2025-11-22 04:30:26] 2025-11-22 09:29:45,029 | INFO     | cat /etc/os-release:
[2025-11-22 04:30:26] NAME="CentOS Linux"
[2025-11-22 04:30:26] VERSION="7 (Core)"
[2025-11-22 04:30:26] ID="centos"
[2025-11-22 04:30:26] ID_LIKE="rhel fedora"
[2025-11-22 04:30:26] VERSION_ID="7"
[2025-11-22 04:30:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 04:30:26] ANSI_COLOR="0;31"
[2025-11-22 04:30:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 04:30:26] HOME_URL="https://www.centos.org/"
[2025-11-22 04:30:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 04:30:26] 
[2025-11-22 04:30:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 04:30:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 04:30:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 04:30:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 04:30:26] 
[2025-11-22 04:30:26] 2025-11-22 09:29:45,029 | INFO     | ***************************************
[2025-11-22 04:30:26] 2025-11-22 09:29:45,531 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-22 04:30:26] 2025-11-22 09:29:45,553 | INFO     | sufficient remaining disk space (57156829184 B)
[2025-11-22 04:30:26] 2025-11-22 09:29:45,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 04:30:26] 2025-11-22 09:29:45,554 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 04:30:26] 2025-11-22 09:29:45,554 | INFO     | update_server=False
[2025-11-22 04:30:26] 2025-11-22 09:29:45,554 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 04:30:26] 2025-11-22 09:29:45,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 04:30:26] 2025-11-22 09:29:45,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 04:30:26] 2025-11-22 09:29:45,555 | INFO     | aborting loop
[2025-11-22 04:30:26] 2025-11-22 09:29:45,834 | INFO     | all job control threads have been joined
[2025-11-22 04:30:26] 2025-11-22 09:29:46,196 | INFO     | all data control threads have been joined
[2025-11-22 04:30:26] 2025-11-22 09:29:46,428 | INFO     | all payload control threads have been joined
[2025-11-22 04:30:26] 2025-11-22 09:29:46,560 | INFO     | [job] retrieve thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:46,561 | INFO     | [job] job monitor thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:46,762 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:46,762 | INFO     | [job] validate thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:46,766 | INFO     | [data] copytool_in thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:46,782 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:46,840 | INFO     | [job] control thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:47,145 | INFO     | [payload] failed_post thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:47,202 | INFO     | [data] control thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:47,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 04:30:26] 2025-11-22 09:29:47,427 | INFO     | [payload] validate_post thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:47,434 | INFO     | [payload] control thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:47,561 | INFO     | [data] copytool_out thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:47,715 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:48,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 04:30:26] 2025-11-22 09:29:49,519 | INFO     | [job] queue monitor thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:51,235 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:29:55,890 | INFO     | job.realtimelogging is not enabled
[2025-11-22 04:30:26] 2025-11-22 09:29:56,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 04:30:26] 2025-11-22 09:30:16,754 | INFO     | PID=1489174 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 04:30:26] 2025-11-22 09:30:16,754 | INFO     | .. there are 10 such processes running
[2025-11-22 04:30:26] 2025-11-22 09:30:16,755 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 04:30:26] 2025-11-22 09:30:16,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 04:30:26] 2025-11-22 09:30:16,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 04:30:26] 2025-11-22 09:30:19,554 | INFO     | [monitor] cgroup control has ended
[2025-11-22 04:30:26] 2025-11-22 09:30:21,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525999343424)>', '<ExcThread(monitor, started 140525281732352)>']
[2025-11-22 04:30:26] 2025-11-22 09:30:21,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 04:30:26] 2025-11-22 09:30:21,799 | INFO     | [monitor] control thread has ended
[2025-11-22 04:30:26] 2025-11-22 09:30:26,095 | INFO     | all workflow threads have been joined
[2025-11-22 04:30:26] 2025-11-22 09:30:26,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 04:30:26] 2025-11-22 09:30:26,096 | INFO     | traces error code: 0
[2025-11-22 04:30:26] 2025-11-22 09:30:26,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 04:30:26] 2025-11-22 09:30:26,273 [wrapper] ==== pilot stdout END ====
[2025-11-22 04:30:26] 2025-11-22 09:30:26,277 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 04:30:26] 2025-11-22 09:30:26,281 [wrapper] pilotpid: 1489174
[2025-11-22 04:30:26] 2025-11-22 09:30:26,285 [wrapper] Pilot exit status: 0
[2025-11-22 04:30:26] 2025-11-22 09:30:26,315 [wrapper] pandaids: 6893874159
[2025-11-22 04:30:26] 2025-11-22 09:30:26,375 [wrapper] cleanup supervisor_pilot 3778018 1489175
[2025-11-22 04:30:26] 2025-11-22 09:30:26,379 [wrapper] Test setup, not cleaning
[2025-11-22 04:30:26] 2025-11-22 09:30:26,383 [wrapper] apfmon messages muted
[2025-11-22 04:30:26] 2025-11-22 09:30:26,387 [wrapper] ==== wrapper stdout END ====
[2025-11-22 04:30:26] 2025-11-22 09:30:26,391 [wrapper] ==== wrapper stderr END ====
[2025-11-22 04:30:26]  *** Error codes and diagnostics ***
[2025-11-22 04:30:26]     "exeErrorCode": 0,
[2025-11-22 04:30:26]     "exeErrorDiag": "",
[2025-11-22 04:30:26]     "pilotErrorCode": 0,
[2025-11-22 04:30:26]     "pilotErrorDiag": "",
[2025-11-22 04:30:26]  *** Listing of results directory ***
[2025-11-22 04:30:26] total 1337328
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 10:07 pilot3.tar.gz
[2025-11-22 04:30:26] -rwx------. 1 boincer umatlas     36292 Nov 20 10:45 runpilot2-wrapper.sh
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 10:45 queuedata.json
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas       100 Nov 21 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 04:30:26] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 04:53 run_atlas
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas       105 Nov 21 04:53 job.xml
[2025-11-22 04:30:26] -rw-r--r--. 2 boincer umatlas 409927232 Nov 21 04:53 EVNT.47493127._000704.pool.root.1
[2025-11-22 04:30:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 04:53 start_atlas.sh
[2025-11-22 04:30:26] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 04:53 shared
[2025-11-22 04:30:26] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 04:53 input.tar.gz
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas         0 Nov 21 04:53 boinc_lockfile
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 04:53 pandaJob.out
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas        57 Nov 21 04:53 setup.sh.local
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas    989817 Nov 21 04:53 agis_schedconf.cvmfs.json
[2025-11-22 04:30:26] drwx------. 5 boincer umatlas      4096 Nov 21 04:53 pilot3
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas       533 Nov 22 03:36 boinc_task_state.xml
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas 929190067 Nov 22 04:28 HITS.47523449._007034.pool.root.1
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas      1058 Nov 22 04:29 memory_monitor_summary.json
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas   1526164 Nov 22 04:29 agis_ddmendpoints.agis.ALL.json
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas        95 Nov 22 04:29 pilot_heartbeat.json
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas   2410395 Nov 22 04:29 log.47523449._007034.job.log.tgz.1
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas      8629 Nov 22 04:29 heartbeat.json
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas      6616 Nov 22 04:29 init_data.xml
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas        29 Nov 22 04:30 wrapper_checkpoint.txt
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas      4896 Nov 22 04:30 pilotlog.txt
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas  10783768 Nov 22 04:30 log.47523449._007034.job.log.1
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 04:30 boinc_mmap_file
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas       353 Nov 22 04:30 output.list
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas       620 Nov 22 04:30 runtime_log
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas  13209600 Nov 22 04:30 result.tar.gz
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas      9343 Nov 22 04:30 runtime_log.err
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas       660 Nov 22 04:30 eUENDmx1Lg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRFIKDmqMPFXm.diag
[2025-11-22 04:30:26] -rw-r--r--. 1 boincer umatlas     21721 Nov 22 04:30 stderr.txt
[2025-11-22 04:30:26] HITS file was successfully produced:
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas 929190067 Nov 22 04:28 shared/HITS.pool.root.1
[2025-11-22 04:30:26]  *** Contents of shared directory: ***
[2025-11-22 04:30:26] total 1321236
[2025-11-22 04:30:26] -rw-r--r--. 2 boincer umatlas 409927232 Nov 21 04:53 ATLAS.root_0
[2025-11-22 04:30:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 04:53 start_atlas.sh
[2025-11-22 04:30:26] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 04:53 input.tar.gz
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas 929190067 Nov 22 04:28 HITS.pool.root.1
[2025-11-22 04:30:26] -rw-------. 1 boincer umatlas  13209600 Nov 22 04:30 result.tar.gz
04:30:48 (1485448): run_atlas exited; CPU time 331606.248150
04:30:48 (1485448): called boinc_finish(0)

</stderr_txt>
]]>

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