Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:50:35 (22069): wrapper (7.7.26015): starting
01:50:35 (22069): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 01:50:35] Arguments: --nthreads 8
[2025-11-24 01:50:35] Threads: 8
[2025-11-24 01:50:35] Checking for CVMFS
[2025-11-24 01:50:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 01:50:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 01:50:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 01:50:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 01:50:38] 2.11.2.0 23903 79770 135880 153227 2 85 21111155 25165825 4632 130560 237 23738402 99.881 13048380 1949 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 01:50:38] CVMFS is ok
[2025-11-24 01:50:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 01:50:38] Checking for apptainer binary...
[2025-11-24 01:50:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 01:50:38] Running /usr/bin/apptainer --version
[2025-11-24 01:50:38] apptainer version 1.3.2-1.el7
[2025-11-24 01:50:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 01:50:46] cg-vwn444.simple-grid.lan
[2025-11-24 01:50:46] apptainer works
[2025-11-24 01:50:46] Set ATHENA_PROC_NUMBER=8
[2025-11-24 01:50:46] Set ATHENA_CORE_NUMBER=8
[2025-11-24 01:50:46] Starting ATLAS job with PandaID=6893874238
[2025-11-24 01:50:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:30:13]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:30:13] 2025-11-24 22:29:15,227 | INFO     | 77677s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 23:30:13] 2025-11-24 22:29:15,480 | INFO     | monitor loop #5213: job 0:6893874238 is in state 'finished'
[2025-11-24 23:30:13] 2025-11-24 22:29:15,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:30:13] 2025-11-24 22:29:17,234 | INFO     | time since job start (77671s) is within the limit (172800.0s)
[2025-11-24 23:30:13] 2025-11-24 22:29:17,984 | INFO     | monitor loop #5214: job 0:6893874238 is in state 'finished'
[2025-11-24 23:30:13] 2025-11-24 22:29:17,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:30:13] 2025-11-24 22:29:19,241 | INFO     | time since job start (77673s) is within the limit (172800.0s)
[2025-11-24 23:30:13] 2025-11-24 22:29:20,369 | INFO     | PID=25885 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 23:30:13] 2025-11-24 22:29:20,369 | INFO     | .. there are 2 such processes running
[2025-11-24 23:30:13] 2025-11-24 22:29:20,498 | INFO     | monitor loop #5215: job 0:6893874238 is in state 'finished'
[2025-11-24 23:30:13] 2025-11-24 22:29:20,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:30:13] 2025-11-24 22:29:21,370 | INFO     | time since job start (77675s) is within the limit (172800.0s)
[2025-11-24 23:30:13] 2025-11-24 22:29:23,003 | INFO     | monitor loop #5216: job 0:6893874238 is in state 'finished'
[2025-11-24 23:30:13] 2025-11-24 22:29:23,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:30:13] 2025-11-24 22:29:23,380 | INFO     | time since job start (77677s) is within the limit (172800.0s)
[2025-11-24 23:30:13] 2025-11-24 22:29:24,365 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 23:30:13] 2025-11-24 22:29:24,366 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 23:30:13] 2025-11-24 22:29:24,368 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6893874238/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 23:30:13] 2025-11-24 22:29:24,369 | INFO     | extracted standard info from prmon json
[2025-11-24 23:30:13] 2025-11-24 22:29:24,369 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:30:13] 2025-11-24 22:29:24,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:30:13] 2025-11-24 22:29:24,396 | INFO     | fitting pss+swap vs Time
[2025-11-24 23:30:13] 2025-11-24 22:29:24,398 | INFO     | sum of square deviations: 626207486170.6073
[2025-11-24 23:30:13] 2025-11-24 22:29:24,443 | INFO     | sum of deviations: 2182531640831.3662
[2025-11-24 23:30:13] 2025-11-24 22:29:24,443 | INFO     | mean x: 1763984703.5949366
[2025-11-24 23:30:13] 2025-11-24 22:29:24,443 | INFO     | mean y: 2807037.059335443
[2025-11-24 23:30:13] 2025-11-24 22:29:24,443 | INFO     | intersect: -6145238961.371265
[2025-11-24 23:30:13] 2025-11-24 22:29:24,445 | INFO     | chi2: 33.51614676140466
[2025-11-24 23:30:13] 2025-11-24 22:29:24,447 | INFO     | sum of square deviations: 618805983454.593
[2025-11-24 23:30:13] 2025-11-24 22:29:24,502 | INFO     | sum of deviations: 2586063654147.254
[2025-11-24 23:30:13] 2025-11-24 22:29:24,502 | INFO     | mean x: 1763984551.0992851
[2025-11-24 23:30:13] 2025-11-24 22:29:24,502 | INFO     | mean y: 2815349.83796664
[2025-11-24 23:30:13] 2025-11-24 22:29:24,503 | INFO     | intersect: -7369085465.678074
[2025-11-24 23:30:13] 2025-11-24 22:29:24,504 | INFO     | chi2: 30.294630333453416
[2025-11-24 23:30:13] 2025-11-24 22:29:24,505 | INFO     | current chi2=30.294630333453416 (change=9.611834113523358 %)
[2025-11-24 23:30:13] 2025-11-24 22:29:24,505 | INFO     | right removable region: 1258
[2025-11-24 23:30:13] 2025-11-24 22:29:24,507 | INFO     | sum of square deviations: 618805139214.5931
[2025-11-24 23:30:13] 2025-11-24 22:29:24,554 | INFO     | sum of deviations: 1647867749159.077
[2025-11-24 23:30:13] 2025-11-24 22:29:24,554 | INFO     | mean x: 1763984856.0992851
[2025-11-24 23:30:13] 2025-11-24 22:29:24,555 | INFO     | mean y: 2818051.9753772835
[2025-11-24 23:30:13] 2025-11-24 22:29:24,555 | INFO     | intersect: -4694644154.076186
[2025-11-24 23:30:13] 2025-11-24 22:29:24,556 | INFO     | chi2: 28.614151185873542
[2025-11-24 23:30:13] 2025-11-24 22:29:24,557 | INFO     | current chi2=28.614151185873542 (change=14.62577309506231 %)
[2025-11-24 23:30:13] 2025-11-24 22:29:24,557 | INFO     | left removable region: 10
[2025-11-24 23:30:13] 2025-11-24 22:29:24,559 | INFO     | sum of square deviations: 602726790067.183
[2025-11-24 23:30:13] 2025-11-24 22:29:24,608 | INFO     | sum of deviations: 1658637525793.9028
[2025-11-24 23:30:13] 2025-11-24 22:29:24,608 | INFO     | mean x: 1763984825.6089745
[2025-11-24 23:30:13] 2025-11-24 22:29:24,609 | INFO     | mean y: 2838361.919871795
[2025-11-24 23:30:13] 2025-11-24 22:29:24,609 | INFO     | intersect: -4851452960.2892065
[2025-11-24 23:30:13] 2025-11-24 22:29:24,610 | INFO     | chi2: 20.738478675976886
[2025-11-24 23:30:13] 2025-11-24 22:29:24,611 | INFO     | current memory leak: 2.75 B/s (using 1248 data points, chi2=20.74)
[2025-11-24 23:30:13] 2025-11-24 22:29:24,612 | INFO     | could have reported an average CPU frequency of 1999 MHz (43 samples)
[2025-11-24 23:30:13] 2025-11-24 22:29:24,612 | INFO     | ..............................
[2025-11-24 23:30:13] 2025-11-24 22:29:24,613 | INFO     | . Timing measurements:
[2025-11-24 23:30:13] 2025-11-24 22:29:24,613 | INFO     | . get job = 0 s
[2025-11-24 23:30:13] 2025-11-24 22:29:24,613 | INFO     | . initial setup = 8 s
[2025-11-24 23:30:13] 2025-11-24 22:29:24,613 | INFO     | . payload setup = 147 s
[2025-11-24 23:30:13] 2025-11-24 22:29:24,613 | INFO     | . stage-in = 0 s
[2025-11-24 23:30:13] 2025-11-24 22:29:24,613 | INFO     | . payload execution = 77235 s
[2025-11-24 23:30:13] 2025-11-24 22:29:24,613 | INFO     | . stage-out = 6 s
[2025-11-24 23:30:13] 2025-11-24 22:29:24,613 | INFO     | . log creation = 2 s
[2025-11-24 23:30:13] 2025-11-24 22:29:24,613 | INFO     | ..............................
[2025-11-24 23:30:13] 2025-11-24 22:29:25,205 | INFO     | 
[2025-11-24 23:30:13] 2025-11-24 22:29:25,205 | INFO     | job summary report
[2025-11-24 23:30:13] 2025-11-24 22:29:25,205 | INFO     | --------------------------------------------------
[2025-11-24 23:30:13] 2025-11-24 22:29:25,205 | INFO     | PanDA job id: 6893874238
[2025-11-24 23:30:13] 2025-11-24 22:29:25,205 | INFO     | task id: 47523449
[2025-11-24 23:30:13] 2025-11-24 22:29:25,205 | INFO     | errors: (none)
[2025-11-24 23:30:13] 2025-11-24 22:29:25,209 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:30:13] 2025-11-24 22:29:25,209 | INFO     | pilot state: finished 
[2025-11-24 23:30:13] 2025-11-24 22:29:25,209 | INFO     | transexitcode: 0
[2025-11-24 23:30:13] 2025-11-24 22:29:25,209 | INFO     | exeerrorcode: 0
[2025-11-24 23:30:13] 2025-11-24 22:29:25,209 | INFO     | exeerrordiag: 
[2025-11-24 23:30:13] 2025-11-24 22:29:25,209 | INFO     | exitcode: 0
[2025-11-24 23:30:13] 2025-11-24 22:29:25,209 | INFO     | exitmsg: OK
[2025-11-24 23:30:13] 2025-11-24 22:29:25,209 | INFO     | cpuconsumptiontime: 336694 s
[2025-11-24 23:30:13] 2025-11-24 22:29:25,209 | INFO     | nevents: 1000
[2025-11-24 23:30:13] 2025-11-24 22:29:25,210 | INFO     | neventsw: 0
[2025-11-24 23:30:13] 2025-11-24 22:29:25,210 | INFO     | pid: 32483
[2025-11-24 23:30:13] 2025-11-24 22:29:25,210 | INFO     | pgrp: 32483
[2025-11-24 23:30:13] 2025-11-24 22:29:25,210 | INFO     | corecount: 8
[2025-11-24 23:30:13] 2025-11-24 22:29:25,210 | INFO     | event service: False
[2025-11-24 23:30:13] 2025-11-24 22:29:25,210 | INFO     | sizes: {0: 2298635, 1: 2298834, 12: 2298834, 23: 2298862, 33: 2298890, 44: 2298946, 55: 2299102, 66: 2299130, 76: 2299158, 87: 2299214, 91: 2299504, 98: 2299812, 7
[2025-11-24 23:30:13] 2025-11-24 22:29:25,210 | INFO     | --------------------------------------------------
[2025-11-24 23:30:13] 2025-11-24 22:29:25,210 | INFO     | 
[2025-11-24 23:30:13] 2025-11-24 22:29:25,210 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-24 23:30:13] 2025-11-24 22:29:25,422 | INFO     | time since job start (77679s) is within the limit (172800.0s)
[2025-11-24 23:30:13] 2025-11-24 22:29:25,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,939 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,939 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,939 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,941 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:30:13] 2025-11-24 22:29:25,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:30:13] 2025-11-24 22:29:25,941 | INFO     | job 6893874238 has completed (purged errors)
[2025-11-24 23:30:13] 2025-11-24 22:29:25,941 | INFO     | overall cleanup function is called
[2025-11-24 23:30:13] 2025-11-24 22:29:26,959 | INFO     | --- collectZombieJob: --- 10, [32483]
[2025-11-24 23:30:13] 2025-11-24 22:29:26,959 | INFO     | zombie collector waiting for pid 32483
[2025-11-24 23:30:13] 2025-11-24 22:29:26,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:30:13] 2025-11-24 22:29:26,959 | INFO     | collected zombie processes
[2025-11-24 23:30:13] 2025-11-24 22:29:26,959 | INFO     | will attempt to kill all subprocesses of pid=32483
[2025-11-24 23:30:13] 2025-11-24 22:29:27,054 | INFO     | process IDs to be killed: [32483] (in reverse order)
[2025-11-24 23:30:13] 2025-11-24 22:29:27,845 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:30:13] 2025-11-24 22:29:27,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:30:13] 2025-11-24 22:29:27,847 | INFO     | did not find any defunct processes belonging to 32483
[2025-11-24 23:30:13] 2025-11-24 22:29:27,849 | INFO     | did not find any defunct processes belonging to 32483
[2025-11-24 23:30:13] 2025-11-24 22:29:27,897 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:30:13] 2025-11-24 22:29:27,897 | INFO     | ready for new job
[2025-11-24 23:30:13] 2025-11-24 22:29:27,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:30:13] 2025-11-24 22:29:27,903 | INFO     | ***************************************
[2025-11-24 23:30:13] 2025-11-24 22:29:27,903 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:30:13] 2025-11-24 22:29:27,903 | INFO     | ***************************************
[2025-11-24 23:30:13] 2025-11-24 22:29:27,903 | INFO     | 
[2025-11-24 23:30:13] 2025-11-24 22:29:27,904 | INFO     | pilot is running in a VM
[2025-11-24 23:30:13] 2025-11-24 22:29:27,904 | INFO     | architecture information:
[2025-11-24 23:30:13] 2025-11-24 22:29:27,912 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:30:13] 2025-11-24 22:29:28,145 | INFO     | cat /etc/os-release:
[2025-11-24 23:30:13] NAME="CentOS Linux"
[2025-11-24 23:30:13] VERSION="7 (Core)"
[2025-11-24 23:30:13] ID="centos"
[2025-11-24 23:30:13] ID_LIKE="rhel fedora"
[2025-11-24 23:30:13] VERSION_ID="7"
[2025-11-24 23:30:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:30:13] ANSI_COLOR="0;31"
[2025-11-24 23:30:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:30:13] HOME_URL="https://www.centos.org/"
[2025-11-24 23:30:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:30:13] 
[2025-11-24 23:30:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:30:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:30:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:30:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:30:13] 
[2025-11-24 23:30:13] 2025-11-24 22:29:28,145 | INFO     | ***************************************
[2025-11-24 23:30:13] 2025-11-24 22:29:28,649 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-24 23:30:13] 2025-11-24 22:29:28,901 | INFO     | sufficient remaining disk space (493546897408 B)
[2025-11-24 23:30:13] 2025-11-24 22:29:28,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:30:13] 2025-11-24 22:29:28,901 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:30:13] 2025-11-24 22:29:28,902 | INFO     | update_server=False
[2025-11-24 23:30:13] 2025-11-24 22:29:28,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:30:13] 2025-11-24 22:29:28,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:30:13] 2025-11-24 22:29:28,910 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:30:13] 2025-11-24 22:29:29,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:30:13] 2025-11-24 22:29:29,020 | INFO     | aborting loop
[2025-11-24 23:30:13] 2025-11-24 22:29:29,258 | INFO     | all data control threads have been joined
[2025-11-24 23:30:13] 2025-11-24 22:29:29,754 | INFO     | all payload control threads have been joined
[2025-11-24 23:30:13] 2025-11-24 22:29:29,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:30:13] 2025-11-24 22:29:29,908 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,016 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,026 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,182 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,220 | INFO     | all job control threads have been joined
[2025-11-24 23:30:13] 2025-11-24 22:29:30,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,264 | INFO     | [data] control thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,720 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,760 | INFO     | [payload] control thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,772 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,917 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,932 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:30,940 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:31,144 | INFO     | [job] validate thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:31,202 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:31,226 | INFO     | [job] control thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:32,912 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:30:13] 2025-11-24 22:29:58,549 | INFO     | PID=25885 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 23:30:13] 2025-11-24 22:29:58,549 | INFO     | .. there are 2 such processes running
[2025-11-24 23:30:13] 2025-11-24 22:29:58,550 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:30:13] 2025-11-24 22:29:58,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:30:13] 2025-11-24 22:29:58,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:30:13] 2025-11-24 22:30:01,289 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:30:13] 2025-11-24 22:30:02,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365520136000)>', '<ExcThread(monitor, started 140365067695872)>']
[2025-11-24 23:30:13] 2025-11-24 22:30:03,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:30:13] 2025-11-24 22:30:03,581 | INFO     | [monitor] control thread has ended
[2025-11-24 23:30:13] 2025-11-24 22:30:07,648 | INFO     | all workflow threads have been joined
[2025-11-24 23:30:13] 2025-11-24 22:30:07,648 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:30:13] 2025-11-24 22:30:07,648 | INFO     | traces error code: 0
[2025-11-24 23:30:13] 2025-11-24 22:30:07,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:30:13] 2025-11-24 22:30:08,020 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:30:13] 2025-11-24 22:30:08,138 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:30:13] 2025-11-24 22:30:08,248 [wrapper] pilotpid: 25885
[2025-11-24 23:30:13] 2025-11-24 22:30:08,352 [wrapper] Pilot exit status: 0
[2025-11-24 23:30:13] 2025-11-24 22:30:08,838 [wrapper] pandaids: 6893874238
[2025-11-24 23:30:13] 2025-11-24 22:30:09,971 [wrapper] cleanup supervisor_pilot 19640 25886
[2025-11-24 23:30:13] 2025-11-24 22:30:10,084 [wrapper] Test setup, not cleaning
[2025-11-24 23:30:13] 2025-11-24 22:30:10,192 [wrapper] apfmon messages muted
[2025-11-24 23:30:13] 2025-11-24 22:30:10,296 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:30:13] 2025-11-24 22:30:10,366 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:30:13]  *** Error codes and diagnostics ***
[2025-11-24 23:30:13]     "exeErrorCode": 0,
[2025-11-24 23:30:13]     "exeErrorDiag": "",
[2025-11-24 23:30:13]     "pilotErrorCode": 0,
[2025-11-24 23:30:13]     "pilotErrorDiag": "",
[2025-11-24 23:30:13]  *** Listing of results directory ***
[2025-11-24 23:30:13] total 1316036
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc    576529 Nov 20 16:07 pilot3.tar.gz
[2025-11-24 23:30:13] -rwx------. 1 boinc boinc     36292 Nov 20 16:45 runpilot2-wrapper.sh
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc      5112 Nov 20 16:45 queuedata.json
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc       100 Nov 24 01:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:30:13] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 01:50 run_atlas
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc       105 Nov 24 01:50 job.xml
[2025-11-24 23:30:13] -rw-r--r--. 2 boinc boinc 409403703 Nov 24 01:50 EVNT.47493127._000707.pool.root.1
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc      6392 Nov 24 01:50 init_data.xml
[2025-11-24 23:30:13] -rw-r--r--. 2 boinc boinc     15847 Nov 24 01:50 start_atlas.sh
[2025-11-24 23:30:13] drwxrwx--x. 2 boinc boinc        68 Nov 24 01:50 shared
[2025-11-24 23:30:13] -rw-r--r--. 2 boinc boinc    590101 Nov 24 01:50 input.tar.gz
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc         0 Nov 24 01:50 boinc_lockfile
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc      2785 Nov 24 01:50 pandaJob.out
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc    989786 Nov 24 01:54 agis_schedconf.cvmfs.json
[2025-11-24 23:30:13] drwx------. 5 boinc boinc      4096 Nov 24 01:54 pilot3
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc       533 Nov 24 22:56 boinc_task_state.xml
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc 908788751 Nov 24 23:26 HITS.47523449._007066.pool.root.1
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc      1033 Nov 24 23:27 memory_monitor_summary.json
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc   1516227 Nov 24 23:27 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc   2397713 Nov 24 23:27 log.47523449._007066.job.log.tgz.1
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc      8631 Nov 24 23:29 heartbeat.json
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc      8192 Nov 24 23:29 boinc_mmap_file
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc        29 Nov 24 23:29 wrapper_checkpoint.txt
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc        95 Nov 24 23:29 pilot_heartbeat.json
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc      4884 Nov 24 23:30 pilotlog.txt
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc  10363734 Nov 24 23:30 log.47523449._007066.job.log.1
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc       353 Nov 24 23:30 output.list
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc       620 Nov 24 23:30 runtime_log
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc  12779520 Nov 24 23:30 result.tar.gz
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc      8817 Nov 24 23:30 runtime_log.err
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc       662 Nov 24 23:30 lswNDmx1Lg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuFIKDmkrBYxn.diag
[2025-11-24 23:30:13] -rw-r--r--. 1 boinc boinc     21518 Nov 24 23:30 stderr.txt
[2025-11-24 23:30:13] HITS file was successfully produced:
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc 908788751 Nov 24 23:26 shared/HITS.pool.root.1
[2025-11-24 23:30:13]  *** Contents of shared directory: ***
[2025-11-24 23:30:13] total 1300380
[2025-11-24 23:30:13] -rw-r--r--. 2 boinc boinc 409403703 Nov 24 01:50 ATLAS.root_0
[2025-11-24 23:30:13] -rw-r--r--. 2 boinc boinc     15847 Nov 24 01:50 start_atlas.sh
[2025-11-24 23:30:13] -rw-r--r--. 2 boinc boinc    590101 Nov 24 01:50 input.tar.gz
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc 908788751 Nov 24 23:26 HITS.pool.root.1
[2025-11-24 23:30:13] -rw-------. 1 boinc boinc  12779520 Nov 24 23:30 result.tar.gz
23:30:15 (22069): run_atlas exited; CPU time 336881.255865
23:30:15 (22069): called boinc_finish(0)

</stderr_txt>
]]>

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