Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:22:57 (3321731): wrapper (7.7.26015): starting
23:22:58 (3321731): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 23:22:58] Arguments: --nthreads 8
[2025-11-20 23:22:58] Threads: 8
[2025-11-20 23:22:58] Checking for CVMFS
[2025-11-20 23:22:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:22:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:22:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:23:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:23:00] 2.13.2.0 89619 11787 98160 153108 1 64 34410785 40960001 6651 16776704 0 10030450 99.865 3031779 25586 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 23:23:00] CVMFS is ok
[2025-11-20 23:23:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 23:23:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 23:23:00] Further information can be found at the LHC@home message board.
[2025-11-20 23:23:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:23:00] Checking for apptainer binary...
[2025-11-20 23:23:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:23:00] Running /usr/bin/apptainer --version
[2025-11-20 23:23:00] apptainer version 1.4.4-1.el9
[2025-11-20 23:23:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:23:01] c-211-6.aglt2.org
[2025-11-20 23:23:01] apptainer works
[2025-11-20 23:23:01] Set ATHENA_PROC_NUMBER=8
[2025-11-20 23:23:01] Set ATHENA_CORE_NUMBER=8
[2025-11-20 23:23:01] Starting ATLAS job with PandaID=6893873723
[2025-11-20 23:23:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 21:07:21]  *** The last 200 lines of the pilot log: ***
[2025-11-22 21:07:22] 2025-11-23 02:06:29,650 | INFO     | monitor loop #9007: job 0:6893873723 is in state 'finished'
[2025-11-22 21:07:22] 2025-11-23 02:06:29,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:07:22] 2025-11-23 02:06:30,199 | INFO     | time since job start (164555s) is within the limit (172800.0s)
[2025-11-22 21:07:22] 2025-11-23 02:06:32,182 | INFO     | monitor loop #9008: job 0:6893873723 is in state 'finished'
[2025-11-22 21:07:22] 2025-11-23 02:06:32,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:07:22] 2025-11-23 02:06:32,206 | INFO     | time since job start (164557s) is within the limit (172800.0s)
[2025-11-22 21:07:22] 2025-11-23 02:06:34,213 | INFO     | time since job start (164559s) is within the limit (172800.0s)
[2025-11-22 21:07:22] 2025-11-23 02:06:34,691 | INFO     | monitor loop #9009: job 0:6893873723 is in state 'finished'
[2025-11-22 21:07:22] 2025-11-23 02:06:34,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:07:22] 2025-11-23 02:06:36,220 | INFO     | time since job start (164561s) is within the limit (172800.0s)
[2025-11-22 21:07:22] 2025-11-23 02:06:37,221 | INFO     | monitor loop #9010: job 0:6893873723 is in state 'finished'
[2025-11-22 21:07:22] 2025-11-23 02:06:37,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:07:22] 2025-11-23 02:06:38,227 | INFO     | time since job start (164563s) is within the limit (172800.0s)
[2025-11-22 21:07:22] 2025-11-23 02:06:39,726 | INFO     | monitor loop #9011: job 0:6893873723 is in state 'finished'
[2025-11-22 21:07:22] 2025-11-23 02:06:39,745 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:07:22] 2025-11-23 02:06:40,234 | INFO     | time since job start (164565s) is within the limit (172800.0s)
[2025-11-22 21:07:22] 2025-11-23 02:06:41,111 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 21:07:22] 2025-11-23 02:06:41,122 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2550.224916666667
[2025-11-22 21:07:22] 2025-11-23 02:06:41,132 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6893873723/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 21:07:22] 2025-11-23 02:06:41,133 | INFO     | extracted standard info from prmon json
[2025-11-22 21:07:22] 2025-11-23 02:06:41,133 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 21:07:22] 2025-11-23 02:06:41,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 21:07:22] 2025-11-23 02:06:41,188 | INFO     | fitting pss+swap vs Time
[2025-11-22 21:07:22] 2025-11-23 02:06:41,193 | INFO     | sum of square deviations: 6077159461310.996
[2025-11-22 21:07:22] 2025-11-23 02:06:41,380 | INFO     | sum of deviations: 9942863388633.72
[2025-11-22 21:07:22] 2025-11-23 02:06:41,381 | INFO     | mean x: 1763781365.0011127
[2025-11-22 21:07:22] 2025-11-23 02:06:41,381 | INFO     | mean y: 3029535.7540801186
[2025-11-22 21:07:22] 2025-11-23 02:06:41,381 | INFO     | intersect: -2882699771.0495286
[2025-11-22 21:07:22] 2025-11-23 02:06:41,385 | INFO     | chi2: 21.250260025717623
[2025-11-22 21:07:22] 2025-11-23 02:06:41,397 | INFO     | sum of square deviations: 6043421892963.984
[2025-11-22 21:07:22] 2025-11-23 02:06:41,686 | INFO     | sum of deviations: 11072290680053.715
[2025-11-22 21:07:22] 2025-11-23 02:06:41,686 | INFO     | mean x: 1763781212.5169082
[2025-11-22 21:07:22] 2025-11-23 02:06:41,686 | INFO     | mean y: 3034640.116685247
[2025-11-22 21:07:22] 2025-11-23 02:06:41,686 | INFO     | intersect: -3228429028.4617786
[2025-11-22 21:07:22] 2025-11-23 02:06:41,690 | INFO     | chi2: 16.920119305431875
[2025-11-22 21:07:22] 2025-11-23 02:06:41,690 | INFO     | current chi2=16.920119305431875 (change=20.376883459521427 %)
[2025-11-22 21:07:22] 2025-11-23 02:06:41,691 | INFO     | right removable region: 2690
[2025-11-22 21:07:22] 2025-11-23 02:06:41,695 | INFO     | sum of square deviations: 6043407912373.992
[2025-11-22 21:07:22] 2025-11-23 02:06:41,902 | INFO     | sum of deviations: 8865353312719.15
[2025-11-22 21:07:22] 2025-11-23 02:06:41,903 | INFO     | mean x: 1763781517.5169082
[2025-11-22 21:07:22] 2025-11-23 02:06:41,903 | INFO     | mean y: 3034404.436269045
[2025-11-22 21:07:22] 2025-11-23 02:06:41,903 | INFO     | intersect: -2584337910.3160095
[2025-11-22 21:07:22] 2025-11-23 02:06:41,907 | INFO     | chi2: 17.563107357786315
[2025-11-22 21:07:22] 2025-11-23 02:06:41,907 | INFO     | current chi2=17.563107357786315 (change=17.351094355876203 %)
[2025-11-22 21:07:22] 2025-11-23 02:06:41,907 | INFO     | left removable region: 10
[2025-11-22 21:07:22] 2025-11-23 02:06:41,911 | INFO     | sum of square deviations: 5969611535251.778
[2025-11-22 21:07:22] 2025-11-23 02:06:42,216 | INFO     | sum of deviations: 9523168073739.492
[2025-11-22 21:07:22] 2025-11-23 02:06:42,217 | INFO     | mean x: 1763781487.0518656
[2025-11-22 21:07:22] 2025-11-23 02:06:42,217 | INFO     | mean y: 3043355.8813432837
[2025-11-22 21:07:22] 2025-11-23 02:06:42,217 | INFO     | intersect: -2810671983.4429364
[2025-11-22 21:07:22] 2025-11-23 02:06:42,221 | INFO     | chi2: 11.19024510927379
[2025-11-22 21:07:22] 2025-11-23 02:06:42,225 | INFO     | current memory leak: 1.60 B/s (using 2680 data points, chi2=11.19)
[2025-11-22 21:07:22] 2025-11-23 02:06:42,245 | INFO     | could have reported an average CPU frequency of 2575 MHz (92 samples)
[2025-11-22 21:07:22] 2025-11-23 02:06:42,245 | INFO     | ..............................
[2025-11-22 21:07:22] 2025-11-23 02:06:42,245 | INFO     | . Timing measurements:
[2025-11-22 21:07:22] 2025-11-23 02:06:42,245 | INFO     | . get job = 0 s
[2025-11-22 21:07:22] 2025-11-23 02:06:42,245 | INFO     | . initial setup = 3 s
[2025-11-22 21:07:22] 2025-11-23 02:06:42,246 | INFO     | . payload setup = 38 s
[2025-11-22 21:07:22] 2025-11-23 02:06:42,246 | INFO     | . stage-in = 0 s
[2025-11-22 21:07:22] 2025-11-23 02:06:42,246 | INFO     | . payload execution = 164421 s
[2025-11-22 21:07:22] 2025-11-23 02:06:42,246 | INFO     | . stage-out = 9 s
[2025-11-22 21:07:22] 2025-11-23 02:06:42,246 | INFO     | . log creation = 3 s
[2025-11-22 21:07:22] 2025-11-23 02:06:42,246 | INFO     | ..............................
[2025-11-22 21:07:22] 2025-11-23 02:06:42,317 | INFO     | time since job start (164567s) is within the limit (172800.0s)
[2025-11-22 21:07:22] 2025-11-23 02:06:42,667 | INFO     | 
[2025-11-22 21:07:22] 2025-11-23 02:06:42,667 | INFO     | job summary report
[2025-11-22 21:07:22] 2025-11-23 02:06:42,667 | INFO     | --------------------------------------------------
[2025-11-22 21:07:22] 2025-11-23 02:06:42,667 | INFO     | PanDA job id: 6893873723
[2025-11-22 21:07:22] 2025-11-23 02:06:42,667 | INFO     | task id: 47523449
[2025-11-22 21:07:22] 2025-11-23 02:06:42,668 | INFO     | errors: (none)
[2025-11-22 21:07:22] 2025-11-23 02:06:42,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 21:07:22] 2025-11-23 02:06:42,668 | INFO     | pilot state: finished 
[2025-11-22 21:07:22] 2025-11-23 02:06:42,668 | INFO     | transexitcode: 0
[2025-11-22 21:07:22] 2025-11-23 02:06:42,668 | INFO     | exeerrorcode: 0
[2025-11-22 21:07:22] 2025-11-23 02:06:42,668 | INFO     | exeerrordiag: 
[2025-11-22 21:07:22] 2025-11-23 02:06:42,668 | INFO     | exitcode: 0
[2025-11-22 21:07:22] 2025-11-23 02:06:42,669 | INFO     | exitmsg: OK
[2025-11-22 21:07:22] 2025-11-23 02:06:42,669 | INFO     | cpuconsumptiontime: 339447 s
[2025-11-22 21:07:22] 2025-11-23 02:06:42,669 | INFO     | nevents: 1000
[2025-11-22 21:07:22] 2025-11-23 02:06:42,669 | INFO     | neventsw: 0
[2025-11-22 21:07:22] 2025-11-23 02:06:42,669 | INFO     | pid: 3332280
[2025-11-22 21:07:22] 2025-11-23 02:06:42,669 | INFO     | pgrp: 3332280
[2025-11-22 21:07:22] 2025-11-23 02:06:42,669 | INFO     | corecount: 8
[2025-11-22 21:07:22] 2025-11-23 02:06:42,669 | INFO     | event service: False
[2025-11-22 21:07:22] 2025-11-23 02:06:42,670 | INFO     | sizes: {0: 2298584, 1: 2298783, 12: 2298783, 23: 2299101, 34: 2299101, 164465: 2398006, 164475: 2407000, 164478: 2407056, 164507: 2407302}
[2025-11-22 21:07:22] 2025-11-23 02:06:42,670 | INFO     | --------------------------------------------------
[2025-11-22 21:07:22] 2025-11-23 02:06:42,670 | INFO     | 
[2025-11-22 21:07:22] 2025-11-23 02:06:42,670 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-22 21:07:22] 2025-11-23 02:06:42,857 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,859 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,859 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,859 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,860 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,860 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,860 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,860 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 21:07:22] 2025-11-23 02:06:42,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,860 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 21:07:22] 2025-11-23 02:06:42,865 | INFO     | job 6893873723 has completed (purged errors)
[2025-11-22 21:07:22] 2025-11-23 02:06:42,865 | INFO     | overall cleanup function is called
[2025-11-22 21:07:22] 2025-11-23 02:06:43,913 | INFO     | --- collectZombieJob: --- 10, [3332280]
[2025-11-22 21:07:22] 2025-11-23 02:06:43,913 | INFO     | zombie collector waiting for pid 3332280
[2025-11-22 21:07:22] 2025-11-23 02:06:43,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 21:07:22] 2025-11-23 02:06:43,913 | INFO     | collected zombie processes
[2025-11-22 21:07:22] 2025-11-23 02:06:43,913 | INFO     | will attempt to kill all subprocesses of pid=3332280
[2025-11-22 21:07:22] 2025-11-23 02:06:44,520 | INFO     | process IDs to be killed: [3332280] (in reverse order)
[2025-11-22 21:07:22] 2025-11-23 02:06:44,852 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 21:07:22] 2025-11-23 02:06:44,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 21:07:22] 2025-11-23 02:06:44,878 | INFO     | did not find any defunct processes belonging to 3332280
[2025-11-22 21:07:22] 2025-11-23 02:06:44,905 | INFO     | did not find any defunct processes belonging to 3332280
[2025-11-22 21:07:22] 2025-11-23 02:06:44,913 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 21:07:22] 2025-11-23 02:06:44,913 | INFO     | ready for new job
[2025-11-22 21:07:22] 2025-11-23 02:06:44,914 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 21:07:22] 2025-11-23 02:06:44,929 | INFO     | ***************************************
[2025-11-22 21:07:22] 2025-11-23 02:06:44,929 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 21:07:22] 2025-11-23 02:06:44,930 | INFO     | ***************************************
[2025-11-22 21:07:22] 2025-11-23 02:06:44,930 | INFO     | 
[2025-11-22 21:07:22] 2025-11-23 02:06:44,937 | INFO     | architecture information:
[2025-11-22 21:07:22] 2025-11-23 02:06:44,938 | INFO     | executing command: cat /etc/os-release
[2025-11-22 21:07:22] 2025-11-23 02:06:45,101 | INFO     | cat /etc/os-release:
[2025-11-22 21:07:22] NAME="CentOS Linux"
[2025-11-22 21:07:22] VERSION="7 (Core)"
[2025-11-22 21:07:22] ID="centos"
[2025-11-22 21:07:22] ID_LIKE="rhel fedora"
[2025-11-22 21:07:22] VERSION_ID="7"
[2025-11-22 21:07:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 21:07:22] ANSI_COLOR="0;31"
[2025-11-22 21:07:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 21:07:22] HOME_URL="https://www.centos.org/"
[2025-11-22 21:07:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 21:07:22] 
[2025-11-22 21:07:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 21:07:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 21:07:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 21:07:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 21:07:22] 
[2025-11-22 21:07:22] 2025-11-23 02:06:45,101 | INFO     | ***************************************
[2025-11-22 21:07:22] 2025-11-23 02:06:45,605 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-22 21:07:22] 2025-11-23 02:06:45,720 | INFO     | sufficient remaining disk space (60702064640 B)
[2025-11-22 21:07:22] 2025-11-23 02:06:45,721 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 21:07:22] 2025-11-23 02:06:45,721 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 21:07:22] 2025-11-23 02:06:45,721 | INFO     | update_server=False
[2025-11-22 21:07:22] 2025-11-23 02:06:45,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 21:07:22] 2025-11-23 02:06:45,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:07:22] 2025-11-23 02:06:45,854 | INFO     | aborting loop
[2025-11-22 21:07:22] 2025-11-23 02:06:46,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 21:07:22] 2025-11-23 02:06:46,727 | INFO     | [job] retrieve thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:46,825 | INFO     | all data control threads have been joined
[2025-11-22 21:07:22] 2025-11-23 02:06:46,860 | INFO     | [job] job monitor thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:47,241 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:47,258 | INFO     | all job control threads have been joined
[2025-11-22 21:07:22] 2025-11-23 02:06:47,275 | INFO     | all payload control threads have been joined
[2025-11-22 21:07:22] 2025-11-23 02:06:47,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 21:07:22] 2025-11-23 02:06:47,340 | INFO     | [payload] validate_post thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:47,542 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:47,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:07:22] 2025-11-23 02:06:47,774 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:47,831 | INFO     | [data] control thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:47,841 | INFO     | [payload] failed_post thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:48,161 | INFO     | [job] validate thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:48,169 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:48,190 | INFO     | [data] copytool_in thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:48,264 | INFO     | [job] control thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:48,280 | INFO     | [payload] control thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:48,494 | INFO     | [data] copytool_out thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:48,693 | INFO     | [job] queue monitor thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:06:51,358 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 21:07:22] 2025-11-23 02:07:15,728 | INFO     | [monitor] cgroup control has ended
[2025-11-22 21:07:22] 2025-11-23 02:07:15,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109713303360)>', '<ExcThread(monitor, started 140109080950528)>']
[2025-11-22 21:07:22] 2025-11-23 02:07:16,923 | INFO     | PID=3325515 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 21:07:22] 2025-11-23 02:07:16,941 | INFO     | .. there are 9 such processes running
[2025-11-22 21:07:22] 2025-11-23 02:07:16,943 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 21:07:22] 2025-11-23 02:07:16,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 21:07:22] 2025-11-23 02:07:16,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 21:07:22] 2025-11-23 02:07:16,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 21:07:22] 2025-11-23 02:07:16,943 | INFO     | [monitor] control thread has ended
[2025-11-22 21:07:22] 2025-11-23 02:07:20,818 | INFO     | all workflow threads have been joined
[2025-11-22 21:07:22] 2025-11-23 02:07:20,818 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 21:07:22] 2025-11-23 02:07:20,818 | INFO     | traces error code: 0
[2025-11-22 21:07:22] 2025-11-23 02:07:20,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 21:07:22] 2025-11-23 02:07:21,159 [wrapper] ==== pilot stdout END ====
[2025-11-22 21:07:22] 2025-11-23 02:07:21,162 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 21:07:22] 2025-11-23 02:07:21,165 [wrapper] pilotpid: 3325515
[2025-11-22 21:07:22] 2025-11-23 02:07:21,168 [wrapper] Pilot exit status: 0
[2025-11-22 21:07:22] 2025-11-23 02:07:21,207 [wrapper] pandaids: 6893873723
[2025-11-22 21:07:22] 2025-11-23 02:07:21,287 [wrapper] cleanup supervisor_pilot 3492549 3325516
[2025-11-22 21:07:22] 2025-11-23 02:07:21,347 [wrapper] Test setup, not cleaning
[2025-11-22 21:07:22] 2025-11-23 02:07:21,355 [wrapper] apfmon messages muted
[2025-11-22 21:07:22] 2025-11-23 02:07:21,358 [wrapper] ==== wrapper stdout END ====
[2025-11-22 21:07:22] 2025-11-23 02:07:21,360 [wrapper] ==== wrapper stderr END ====
[2025-11-22 21:07:22]  *** Error codes and diagnostics ***
[2025-11-22 21:07:22]     "exeErrorCode": 0,
[2025-11-22 21:07:22]     "exeErrorDiag": "",
[2025-11-22 21:07:22]     "pilotErrorCode": 0,
[2025-11-22 21:07:22]     "pilotErrorDiag": "",
[2025-11-22 21:07:22]  *** Listing of results directory ***
[2025-11-22 21:07:22] total 1354904
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 10:07 pilot3.tar.gz
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 10:27 queuedata.json
[2025-11-22 21:07:22] -rwx------. 1 boincer umatlas     36292 Nov 20 10:28 runpilot2-wrapper.sh
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas       100 Nov 20 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 21:07:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 23:22 run_atlas
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas       105 Nov 20 23:22 job.xml
[2025-11-22 21:07:22] -rw-r--r--. 2 boincer umatlas 410695380 Nov 20 23:22 EVNT.47493127._000695.pool.root.1
[2025-11-22 21:07:22] -rw-r--r--. 2 boincer umatlas    590101 Nov 20 23:22 input.tar.gz
[2025-11-22 21:07:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:22 start_atlas.sh
[2025-11-22 21:07:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 23:22 shared
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas         0 Nov 20 23:22 boinc_lockfile
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas      2784 Nov 20 23:23 pandaJob.out
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas        57 Nov 20 23:23 setup.sh.local
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas    989817 Nov 20 23:23 agis_schedconf.cvmfs.json
[2025-11-22 21:07:22] drwx------. 5 boincer umatlas      4096 Nov 20 23:23 pilot3
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas       533 Nov 22 20:35 boinc_task_state.xml
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas 927103416 Nov 22 21:02 HITS.47523449._006942.pool.root.1
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas      6612 Nov 22 21:03 init_data.xml
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas      1082 Nov 22 21:05 memory_monitor_summary.json
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas   1526164 Nov 22 21:06 agis_ddmendpoints.agis.ALL.json
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas   3280377 Nov 22 21:06 log.47523449._006942.job.log.tgz.1
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas      8679 Nov 22 21:06 heartbeat.json
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas        95 Nov 22 21:07 pilot_heartbeat.json
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 21:07 boinc_mmap_file
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas        29 Nov 22 21:07 wrapper_checkpoint.txt
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas      4823 Nov 22 21:07 pilotlog.txt
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas  19569811 Nov 22 21:07 log.47523449._006942.job.log.1
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas       353 Nov 22 21:07 output.list
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas       620 Nov 22 21:07 runtime_log
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas  22865920 Nov 22 21:07 result.tar.gz
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas      9339 Nov 22 21:07 runtime_log.err
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas       668 Nov 22 21:07 cLyLDm4kLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFEIKDmInyFHo.diag
[2025-11-22 21:07:22] -rw-r--r--. 1 boincer umatlas     21796 Nov 22 21:07 stderr.txt
[2025-11-22 21:07:22] HITS file was successfully produced:
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas 927103416 Nov 22 21:02 shared/HITS.pool.root.1
[2025-11-22 21:07:22]  *** Contents of shared directory: ***
[2025-11-22 21:07:22] total 1329384
[2025-11-22 21:07:22] -rw-r--r--. 2 boincer umatlas 410695380 Nov 20 23:22 ATLAS.root_0
[2025-11-22 21:07:22] -rw-r--r--. 2 boincer umatlas    590101 Nov 20 23:22 input.tar.gz
[2025-11-22 21:07:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:22 start_atlas.sh
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas 927103416 Nov 22 21:02 HITS.pool.root.1
[2025-11-22 21:07:22] -rw-------. 1 boincer umatlas  22865920 Nov 22 21:07 result.tar.gz
21:07:23 (3321731): run_atlas exited; CPU time 344026.379063
21:07:23 (3321731): called boinc_finish(0)

</stderr_txt>
]]>

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