Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:55:01 (3381925): wrapper (7.7.26015): starting
04:55:01 (3381925): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 04:55:01] Arguments: --nthreads 12
[2025-11-21 04:55:01] Threads: 12
[2025-11-21 04:55:01] Checking for CVMFS
[2025-11-21 04:55:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 04:55:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 04:55:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 04:55:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 04:55:05] 2.13.3.0 3382157 0 25104 153108 3 1 2915269 4096001 0 130560 0 0 0.000 1292 4470 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-21 04:55:05] CVMFS is ok
[2025-11-21 04:55:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 04:55:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 04:55:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 04:55:05] Further information can be found at the LHC@home message board.
[2025-11-21 04:55:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 04:55:05] Checking for apptainer binary...
[2025-11-21 04:55:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 04:55:05] Running /usr/bin/apptainer --version
[2025-11-21 04:55:05] apptainer version 1.4.4
[2025-11-21 04:55:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 04:55:05] BoincUbuntu
[2025-11-21 04:55:05] apptainer works
[2025-11-21 04:55:05] Set ATHENA_PROC_NUMBER=12
[2025-11-21 04:55:05] Set ATHENA_CORE_NUMBER=12
[2025-11-21 04:55:05] Starting ATLAS job with PandaID=6893874098
[2025-11-21 04:55:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 08:42:55]  *** The last 200 lines of the pilot log: ***
[2025-11-21 08:42:55] 2025-11-21 08:42:23,322 | INFO     | monitor loop #1030: job 0:6893874098 is in state 'finished'
[2025-11-21 08:42:55] 2025-11-21 08:42:23,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,339 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 08:42:55] 2025-11-21 08:42:23,340 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3823.4305625000006
[2025-11-21 08:42:55] 2025-11-21 08:42:23,342 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6893874098/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,342 | INFO     | extracted standard info from prmon json
[2025-11-21 08:42:55] 2025-11-21 08:42:23,342 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 08:42:55] 2025-11-21 08:42:23,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 08:42:55] 2025-11-21 08:42:23,344 | INFO     | fitting pss+swap vs Time
[2025-11-21 08:42:55] 2025-11-21 08:42:23,344 | INFO     | sum of square deviations: 3438704609.8564925
[2025-11-21 08:42:55] 2025-11-21 08:42:23,345 | INFO     | sum of deviations: 117838855274.30054
[2025-11-21 08:42:55] 2025-11-21 08:42:23,345 | INFO     | mean x: 1763707708.7309418
[2025-11-21 08:42:55] 2025-11-21 08:42:23,345 | INFO     | mean y: 3485034.1883408073
[2025-11-21 08:42:55] 2025-11-21 08:42:23,345 | INFO     | intersect: -60435930680.5529
[2025-11-21 08:42:55] 2025-11-21 08:42:23,345 | INFO     | chi2: 3.078877919134192
[2025-11-21 08:42:55] 2025-11-21 08:42:23,345 | INFO     | sum of square deviations: 3212574405.596347
[2025-11-21 08:42:55] 2025-11-21 08:42:23,345 | INFO     | sum of deviations: 159216342786.76144
[2025-11-21 08:42:55] 2025-11-21 08:42:23,345 | INFO     | mean x: 1763707556.238532
[2025-11-21 08:42:55] 2025-11-21 08:42:23,345 | INFO     | mean y: 3512566.0045871558
[2025-11-21 08:42:55] 2025-11-21 08:42:23,345 | INFO     | intersect: -87406468152.41826
[2025-11-21 08:42:55] 2025-11-21 08:42:23,346 | INFO     | chi2: 1.5166574260880008
[2025-11-21 08:42:55] 2025-11-21 08:42:23,346 | INFO     | current chi2=1.5166574260880008 (change=50.73992974315467 %)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,346 | INFO     | sum of square deviations: 2996543667.7464976
[2025-11-21 08:42:55] 2025-11-21 08:42:23,346 | INFO     | sum of deviations: 152060165025.80286
[2025-11-21 08:42:55] 2025-11-21 08:42:23,346 | INFO     | mean x: 1763707403.7323945
[2025-11-21 08:42:55] 2025-11-21 08:42:23,346 | INFO     | mean y: 3507513.6807511738
[2025-11-21 08:42:55] 2025-11-21 08:42:23,346 | INFO     | intersect: -89496152296.20477
[2025-11-21 08:42:55] 2025-11-21 08:42:23,346 | INFO     | chi2: 1.51545011972485
[2025-11-21 08:42:55] 2025-11-21 08:42:23,347 | INFO     | current chi2=1.51545011972485 (change=0.07960310234756697 %)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,347 | INFO     | right removable region: 212
[2025-11-21 08:42:55] 2025-11-21 08:42:23,347 | INFO     | sum of square deviations: 3212542259.068808
[2025-11-21 08:42:55] 2025-11-21 08:42:23,347 | INFO     | sum of deviations: 66680680801.041214
[2025-11-21 08:42:55] 2025-11-21 08:42:23,347 | INFO     | mean x: 1763707861.233945
[2025-11-21 08:42:55] 2025-11-21 08:42:23,347 | INFO     | mean y: 3519207.9403669727
[2025-11-21 08:42:55] 2025-11-21 08:42:23,347 | INFO     | intersect: -36604634533.6129
[2025-11-21 08:42:55] 2025-11-21 08:42:23,347 | INFO     | chi2: 1.6210807962646205
[2025-11-21 08:42:55] 2025-11-21 08:42:23,347 | INFO     | current chi2=1.6210807962646205 (change=47.34832497936512 %)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,347 | INFO     | sum of square deviations: 2996533175.7464976
[2025-11-21 08:42:55] 2025-11-21 08:42:23,348 | INFO     | sum of deviations: 57916884324.91546
[2025-11-21 08:42:55] 2025-11-21 08:42:23,348 | INFO     | mean x: 1763708013.7323945
[2025-11-21 08:42:55] 2025-11-21 08:42:23,348 | INFO     | mean y: 3525382.910798122
[2025-11-21 08:42:55] 2025-11-21 08:42:23,348 | INFO     | intersect: -34085359012.24302
[2025-11-21 08:42:55] 2025-11-21 08:42:23,348 | INFO     | chi2: 1.6181160515947108
[2025-11-21 08:42:55] 2025-11-21 08:42:23,348 | INFO     | current chi2=1.6181160515947108 (change=0.18288691573802016 %)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,348 | INFO     | left removable region: 20
[2025-11-21 08:42:55] 2025-11-21 08:42:23,348 | INFO     | sum of square deviations: 2194753868.453125
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | sum of deviations: 77178558782.04688
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | mean x: 1763707983.234375
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | mean y: 3562901.265625
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | intersect: -62017259667.94485
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | chi2: 0.018808951788240453
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | current memory leak: 35.17 B/s (using 192 data points, chi2=0.02)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | could have reported an average CPU frequency of 3921 MHz (11 samples)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | ..............................
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | . Timing measurements:
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | . get job = 0 s
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | . initial setup = 1 s
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | . payload setup = 3 s
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | . stage-in = 0 s
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | . payload execution = 13597 s
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | . stage-out = 1 s
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | . log creation = 0 s
[2025-11-21 08:42:55] 2025-11-21 08:42:23,349 | INFO     | ..............................
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | 
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | job summary report
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | --------------------------------------------------
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | PanDA job id: 6893874098
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | task id: 47523449
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | errors: (none)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | pilot state: finished 
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | transexitcode: 0
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | exeerrorcode: 0
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | exeerrordiag: 
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | exitcode: 0
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | exitmsg: OK
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | cpuconsumptiontime: 159942 s
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | nevents: 1000
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | neventsw: 0
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | pid: 3393321
[2025-11-21 08:42:55] 2025-11-21 08:42:23,848 | INFO     | pgrp: 3393321
[2025-11-21 08:42:55] 2025-11-21 08:42:23,849 | INFO     | corecount: 12
[2025-11-21 08:42:55] 2025-11-21 08:42:23,849 | INFO     | event service: False
[2025-11-21 08:42:55] 2025-11-21 08:42:23,849 | INFO     | sizes: {0: 2298699, 1: 2298813, 3: 2299103, 11: 2299131, 13604: 2330561, 13606: 2339569, 13608: 2339753, 13612: 2339999}
[2025-11-21 08:42:55] 2025-11-21 08:42:23,849 | INFO     | --------------------------------------------------
[2025-11-21 08:42:55] 2025-11-21 08:42:23,849 | INFO     | 
[2025-11-21 08:42:55] 2025-11-21 08:42:23,849 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-21 08:42:55] 2025-11-21 08:42:23,861 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | job 6893874098 has completed (purged errors)
[2025-11-21 08:42:55] 2025-11-21 08:42:23,862 | INFO     | overall cleanup function is called
[2025-11-21 08:42:55] 2025-11-21 08:42:24,874 | INFO     | --- collectZombieJob: --- 10, [3393321]
[2025-11-21 08:42:55] 2025-11-21 08:42:24,874 | INFO     | zombie collector waiting for pid 3393321
[2025-11-21 08:42:55] 2025-11-21 08:42:24,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 08:42:55] 2025-11-21 08:42:24,874 | INFO     | collected zombie processes
[2025-11-21 08:42:55] 2025-11-21 08:42:24,874 | INFO     | will attempt to kill all subprocesses of pid=3393321
[2025-11-21 08:42:55] 2025-11-21 08:42:24,920 | INFO     | process IDs to be killed: [3393321] (in reverse order)
[2025-11-21 08:42:55] 2025-11-21 08:42:24,952 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 08:42:55] 2025-11-21 08:42:24,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 08:42:55] 2025-11-21 08:42:24,953 | INFO     | did not find any defunct processes belonging to 3393321
[2025-11-21 08:42:55] 2025-11-21 08:42:24,954 | INFO     | did not find any defunct processes belonging to 3393321
[2025-11-21 08:42:55] 2025-11-21 08:42:24,958 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 08:42:55] 2025-11-21 08:42:24,958 | INFO     | ready for new job
[2025-11-21 08:42:55] 2025-11-21 08:42:24,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 08:42:55] 2025-11-21 08:42:24,959 | INFO     | ***************************************
[2025-11-21 08:42:55] 2025-11-21 08:42:24,959 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 08:42:55] 2025-11-21 08:42:24,960 | INFO     | ***************************************
[2025-11-21 08:42:55] 2025-11-21 08:42:24,960 | INFO     | 
[2025-11-21 08:42:55] 2025-11-21 08:42:24,960 | INFO     | architecture information:
[2025-11-21 08:42:55] 2025-11-21 08:42:24,960 | INFO     | executing command: cat /etc/os-release
[2025-11-21 08:42:55] 2025-11-21 08:42:24,970 | INFO     | cat /etc/os-release:
[2025-11-21 08:42:55] NAME="CentOS Linux"
[2025-11-21 08:42:55] VERSION="7 (Core)"
[2025-11-21 08:42:55] ID="centos"
[2025-11-21 08:42:55] ID_LIKE="rhel fedora"
[2025-11-21 08:42:55] VERSION_ID="7"
[2025-11-21 08:42:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 08:42:55] ANSI_COLOR="0;31"
[2025-11-21 08:42:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 08:42:55] HOME_URL="https://www.centos.org/"
[2025-11-21 08:42:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 08:42:55] 
[2025-11-21 08:42:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 08:42:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 08:42:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 08:42:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 08:42:55] 
[2025-11-21 08:42:55] 2025-11-21 08:42:24,970 | INFO     | ***************************************
[2025-11-21 08:42:55] 2025-11-21 08:42:25,473 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-21 08:42:55] 2025-11-21 08:42:25,483 | INFO     | sufficient remaining disk space (336990306304 B)
[2025-11-21 08:42:55] 2025-11-21 08:42:25,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 08:42:55] 2025-11-21 08:42:25,483 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 08:42:55] 2025-11-21 08:42:25,483 | INFO     | update_server=False
[2025-11-21 08:42:55] 2025-11-21 08:42:25,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 08:42:55] 2025-11-21 08:42:25,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 08:42:55] 2025-11-21 08:42:25,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 08:42:55] 2025-11-21 08:42:25,516 | INFO     | all data control threads have been joined
[2025-11-21 08:42:55] 2025-11-21 08:42:25,825 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 08:42:55] 2025-11-21 08:42:25,825 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 08:42:55] 2025-11-21 08:42:25,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 08:42:55] 2025-11-21 08:42:25,825 | INFO     | will abort loop
[2025-11-21 08:42:55] 2025-11-21 08:42:25,916 | INFO     | all job control threads have been joined
[2025-11-21 08:42:55] 2025-11-21 08:42:26,404 | INFO     | all payload control threads have been joined
[2025-11-21 08:42:55] 2025-11-21 08:42:26,484 | INFO     | [job] retrieve thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:26,521 | INFO     | [data] control thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:26,549 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:26,568 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:26,608 | INFO     | [job] validate thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:26,771 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:26,830 | INFO     | [job] job monitor thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:26,921 | INFO     | [job] control thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:27,031 | INFO     | [payload] failed_post thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:27,243 | INFO     | [data] copytool_in thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:27,282 | INFO     | [payload] validate_post thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:27,409 | INFO     | [payload] control thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:27,489 | INFO     | [data] copytool_out thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:27,887 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:28,391 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 08:42:55] 2025-11-21 08:42:29,397 | INFO     | [job] queue monitor thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:29,489 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 08:42:55] 2025-11-21 08:42:40,696 | INFO     | [monitor] cgroup control has ended
[2025-11-21 08:42:55] 2025-11-21 08:42:42,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136604612851520)>', '<ExcThread(monitor, started 136603984983808)>']
[2025-11-21 08:42:55] 2025-11-21 08:42:47,292 | INFO     | all workflow threads have been joined
[2025-11-21 08:42:55] 2025-11-21 08:42:47,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 08:42:55] 2025-11-21 08:42:47,293 | INFO     | traces error code: 0
[2025-11-21 08:42:55] 2025-11-21 08:42:47,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 08:42:55] 2025-11-21 08:42:55,218 | INFO     | PID=3386516 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 08:42:55] 2025-11-21 08:42:55,218 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 08:42:55] 2025-11-21 08:42:55,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 08:42:55] 2025-11-21 08:42:55,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 08:42:55] 2025-11-21 08:42:55,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 08:42:55] 2025-11-21 08:42:55,218 | INFO     | [monitor] control thread has ended
[2025-11-21 08:42:55] 2025-11-21 08:42:55,265 [wrapper] ==== pilot stdout END ====
[2025-11-21 08:42:55] 2025-11-21 08:42:55,266 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 08:42:55] 2025-11-21 08:42:55,268 [wrapper] pilotpid: 3386516
[2025-11-21 08:42:55] 2025-11-21 08:42:55,269 [wrapper] Pilot exit status: 0
[2025-11-21 08:42:55] 2025-11-21 08:42:55,274 [wrapper] pandaids: 6893874098
[2025-11-21 08:42:55] 2025-11-21 08:42:55,289 [wrapper] cleanup supervisor_pilot 3616596 3386517
[2025-11-21 08:42:55] 2025-11-21 08:42:55,290 [wrapper] Test setup, not cleaning
[2025-11-21 08:42:55] 2025-11-21 08:42:55,292 [wrapper] apfmon messages muted
[2025-11-21 08:42:55] 2025-11-21 08:42:55,293 [wrapper] ==== wrapper stdout END ====
[2025-11-21 08:42:55] 2025-11-21 08:42:55,295 [wrapper] ==== wrapper stderr END ====
[2025-11-21 08:42:55]  *** Error codes and diagnostics ***
[2025-11-21 08:42:55]     "exeErrorCode": 0,
[2025-11-21 08:42:55]     "exeErrorDiag": "",
[2025-11-21 08:42:55]     "pilotErrorCode": 0,
[2025-11-21 08:42:55]     "pilotErrorDiag": "",
[2025-11-21 08:42:55]  *** Listing of results directory ***
[2025-11-21 08:42:55] total 1325968
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:07 pilot3.tar.gz
[2025-11-21 08:42:55] -rwx------ 1 boinc boinc     36292 Nov 20 15:33 runpilot2-wrapper.sh
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:33 queuedata.json
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc       100 Nov 21 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 08:42:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 04:55 run_atlas
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc       105 Nov 21 04:55 job.xml
[2025-11-21 08:42:55] -rw-r--r-- 2 boinc boinc 410819673 Nov 21 04:55 EVNT.47493127._000699.pool.root.1
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc      9656 Nov 21 04:55 init_data.xml
[2025-11-21 08:42:55] drwxrwx--x 2 boinc boinc      4096 Nov 21 04:55 shared
[2025-11-21 08:42:55] -rw-r--r-- 2 boinc boinc    590092 Nov 21 04:55 input.tar.gz
[2025-11-21 08:42:55] -rw-r--r-- 2 boinc boinc     15847 Nov 21 04:55 start_atlas.sh
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc         0 Nov 21 04:55 boinc_lockfile
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc      2785 Nov 21 04:55 pandaJob.out
[2025-11-21 08:42:55] -rw------- 1 boinc boinc    989817 Nov 21 04:55 agis_schedconf.cvmfs.json
[2025-11-21 08:42:55] drwx------ 5 boinc boinc      4096 Nov 21 04:55 pilot3
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc       532 Nov 21 08:38 boinc_task_state.xml
[2025-11-21 08:42:55] -rw------- 1 boinc boinc 935195285 Nov 21 08:41 HITS.47523449._006982.pool.root.1
[2025-11-21 08:42:55] -rw------- 1 boinc boinc      1027 Nov 21 08:42 memory_monitor_summary.json
[2025-11-21 08:42:55] -rw------- 1 boinc boinc        95 Nov 21 08:42 pilot_heartbeat.json
[2025-11-21 08:42:55] -rw------- 1 boinc boinc   1526164 Nov 21 08:42 agis_ddmendpoints.agis.ALL.json
[2025-11-21 08:42:55] -rw------- 1 boinc boinc   1970932 Nov 21 08:42 log.47523449._006982.job.log.tgz.1
[2025-11-21 08:42:55] -rw------- 1 boinc boinc      8562 Nov 21 08:42 heartbeat.json
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc      8192 Nov 21 08:42 boinc_mmap_file
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc        29 Nov 21 08:42 wrapper_checkpoint.txt
[2025-11-21 08:42:55] -rw------- 1 boinc boinc       747 Nov 21 08:42 pilotlog.txt
[2025-11-21 08:42:55] -rw------- 1 boinc boinc   1954580 Nov 21 08:42 log.47523449._006982.job.log.1
[2025-11-21 08:42:55] -rw------- 1 boinc boinc       353 Nov 21 08:42 output.list
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc       620 Nov 21 08:42 runtime_log
[2025-11-21 08:42:55] -rw------- 1 boinc boinc   3942400 Nov 21 08:42 result.tar.gz
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc      8912 Nov 21 08:42 runtime_log.err
[2025-11-21 08:42:55] -rw------- 1 boinc boinc       657 Nov 21 08:42 iIPLDmlpLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnEIKDmsvBq6n.diag
[2025-11-21 08:42:55] -rw-r--r-- 1 boinc boinc     21412 Nov 21 08:42 stderr.txt
[2025-11-21 08:42:55] HITS file was successfully produced:
[2025-11-21 08:42:55] -rw------- 1 boinc boinc 935195285 Nov 21 08:41 shared/HITS.pool.root.1
[2025-11-21 08:42:55]  *** Contents of shared directory: ***
[2025-11-21 08:42:55] total 1318928
[2025-11-21 08:42:55] -rw-r--r-- 2 boinc boinc 410819673 Nov 21 04:55 ATLAS.root_0
[2025-11-21 08:42:55] -rw-r--r-- 2 boinc boinc    590092 Nov 21 04:55 input.tar.gz
[2025-11-21 08:42:55] -rw-r--r-- 2 boinc boinc     15847 Nov 21 04:55 start_atlas.sh
[2025-11-21 08:42:55] -rw------- 1 boinc boinc 935195285 Nov 21 08:41 HITS.pool.root.1
[2025-11-21 08:42:55] -rw------- 1 boinc boinc   3942400 Nov 21 08:42 result.tar.gz
08:42:56 (3381925): run_atlas exited; CPU time 159702.428473
08:42:56 (3381925): called boinc_finish(0)

</stderr_txt>
]]>

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