Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:39:51 (2331866): wrapper (7.7.26015): starting
21:39:51 (2331866): wrapper: running run_atlas (--nthreads 9)
[2025-11-20 21:39:51] Arguments: --nthreads 9
[2025-11-20 21:39:51] Threads: 9
[2025-11-20 21:39:51] Checking for CVMFS
[2025-11-20 21:39:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 21:39:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 21:39:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 21:39:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 21:39:52] 2.13.2.0 9630 26052 197372 153104 3 362 33876122 39288833 4089 16776704 0 13398553 99.562 11180389 25982 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 21:39:52] CVMFS is ok
[2025-11-20 21:39:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 21:39:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 21:39:52] Further information can be found at the LHC@home message board.
[2025-11-20 21:39:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 21:39:52] Checking for apptainer binary...
[2025-11-20 21:39:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 21:39:52] Running /usr/bin/apptainer --version
[2025-11-20 21:39:52] apptainer version 1.4.4-1.el9
[2025-11-20 21:39:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 21:39:52] c-211-17.aglt2.org
[2025-11-20 21:39:52] apptainer works
[2025-11-20 21:39:52] Set ATHENA_PROC_NUMBER=9
[2025-11-20 21:39:52] Set ATHENA_CORE_NUMBER=9
[2025-11-20 21:39:52] Starting ATLAS job with PandaID=6893873186
[2025-11-20 21:39:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 11:45:43]  *** The last 200 lines of the pilot log: ***
[2025-11-21 11:45:43] 2025-11-21 16:45:11,017 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 11:45:43] 2025-11-21 16:45:11,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 11:45:43] 2025-11-21 16:45:11,034 | INFO     | fitting pss+swap vs Time
[2025-11-21 11:45:43] 2025-11-21 16:45:11,035 | INFO     | sum of square deviations: 177927746201.0349
[2025-11-21 11:45:43] 2025-11-21 16:45:11,054 | INFO     | sum of deviations: 1860098673185.064
[2025-11-21 11:45:43] 2025-11-21 16:45:11,055 | INFO     | mean x: 1763718143.1095066
[2025-11-21 11:45:43] 2025-11-21 16:45:11,055 | INFO     | mean y: 3041952.7135980744
[2025-11-21 11:45:43] 2025-11-21 16:45:11,055 | INFO     | intersect: -18435283985.297615
[2025-11-21 11:45:43] 2025-11-21 16:45:11,056 | INFO     | chi2: 5.770815810832778
[2025-11-21 11:45:43] 2025-11-21 16:45:11,057 | INFO     | sum of square deviations: 174735344287.34262
[2025-11-21 11:45:43] 2025-11-21 16:45:11,075 | INFO     | sum of deviations: 2147737359077.094
[2025-11-21 11:45:43] 2025-11-21 16:45:11,075 | INFO     | mean x: 1763717990.6162229
[2025-11-21 11:45:43] 2025-11-21 16:45:11,076 | INFO     | mean y: 3055683.9782082327
[2025-11-21 11:45:43] 2025-11-21 16:45:11,076 | INFO     | intersect: -21675460673.271667
[2025-11-21 11:45:43] 2025-11-21 16:45:11,077 | INFO     | chi2: 2.6145132738510806
[2025-11-21 11:45:43] 2025-11-21 16:45:11,077 | INFO     | current chi2=2.6145132738510806 (change=54.69421725532799 %)
[2025-11-21 11:45:43] 2025-11-21 16:45:11,078 | INFO     | sum of square deviations: 171581361698.57523
[2025-11-21 11:45:43] 2025-11-21 16:45:11,097 | INFO     | sum of deviations: 2251315480678.7725
[2025-11-21 11:45:43] 2025-11-21 16:45:11,097 | INFO     | mean x: 1763717838.1230206
[2025-11-21 11:45:43] 2025-11-21 16:45:11,097 | INFO     | mean y: 3060682.7052375153
[2025-11-21 11:45:43] 2025-11-21 16:45:11,097 | INFO     | intersect: -23138644413.97733
[2025-11-21 11:45:43] 2025-11-21 16:45:11,099 | INFO     | chi2: 1.9530530800792825
[2025-11-21 11:45:43] 2025-11-21 16:45:11,099 | INFO     | current chi2=1.9530530800792825 (change=25.299553855295287 %)
[2025-11-21 11:45:43] 2025-11-21 16:45:11,100 | INFO     | sum of square deviations: 168465365797.25
[2025-11-21 11:45:43] 2025-11-21 16:45:11,117 | INFO     | sum of deviations: 2224433674081.251
[2025-11-21 11:45:43] 2025-11-21 16:45:11,118 | INFO     | mean x: 1763717685.625
[2025-11-21 11:45:43] 2025-11-21 16:45:11,118 | INFO     | mean y: 3059366.026960784
[2025-11-21 11:45:43] 2025-11-21 16:45:11,118 | INFO     | intersect: -23285246766.870426
[2025-11-21 11:45:43] 2025-11-21 16:45:11,119 | INFO     | chi2: 1.9459902698398488
[2025-11-21 11:45:43] 2025-11-21 16:45:11,119 | INFO     | current chi2=1.9459902698398488 (change=0.36162920053084074 %)
[2025-11-21 11:45:43] 2025-11-21 16:45:11,119 | INFO     | right removable region: 815
[2025-11-21 11:45:43] 2025-11-21 16:45:11,120 | INFO     | sum of square deviations: 174734882885.80267
[2025-11-21 11:45:43] 2025-11-21 16:45:11,139 | INFO     | sum of deviations: 1646432946021.5154
[2025-11-21 11:45:43] 2025-11-21 16:45:11,139 | INFO     | mean x: 1763718295.6138015
[2025-11-21 11:45:43] 2025-11-21 16:45:11,139 | INFO     | mean y: 3052139.569007264
[2025-11-21 11:45:43] 2025-11-21 16:45:11,139 | INFO     | intersect: -16615518013.34816
[2025-11-21 11:45:43] 2025-11-21 16:45:11,140 | INFO     | chi2: 3.9295549020299356
[2025-11-21 11:45:43] 2025-11-21 16:45:11,141 | INFO     | current chi2=3.9295549020299356 (change=31.906423097865822 %)
[2025-11-21 11:45:43] 2025-11-21 16:45:11,142 | INFO     | sum of square deviations: 171580539792.0069
[2025-11-21 11:45:43] 2025-11-21 16:45:11,160 | INFO     | sum of deviations: 1586694903910.5996
[2025-11-21 11:45:43] 2025-11-21 16:45:11,160 | INFO     | mean x: 1763718448.1157126
[2025-11-21 11:45:43] 2025-11-21 16:45:11,160 | INFO     | mean y: 3055026.341047503
[2025-11-21 11:45:43] 2025-11-21 16:45:11,160 | INFO     | intersect: -16306971022.945692
[2025-11-21 11:45:43] 2025-11-21 16:45:11,161 | INFO     | chi2: 3.8988489741947063
[2025-11-21 11:45:43] 2025-11-21 16:45:11,161 | INFO     | current chi2=3.8988489741947063 (change=0.7814098186888082 %)
[2025-11-21 11:45:43] 2025-11-21 16:45:11,162 | INFO     | left removable region: 20
[2025-11-21 11:45:43] 2025-11-21 16:45:11,163 | INFO     | sum of square deviations: 155789565658.91315
[2025-11-21 11:45:43] 2025-11-21 16:45:11,179 | INFO     | sum of deviations: 1871384588394.1365
[2025-11-21 11:45:43] 2025-11-21 16:45:11,180 | INFO     | mean x: 1763718265.1283019
[2025-11-21 11:45:43] 2025-11-21 16:45:11,180 | INFO     | mean y: 3076410.5672955974
[2025-11-21 11:45:43] 2025-11-21 16:45:11,180 | INFO     | intersect: -21183163923.76097
[2025-11-21 11:45:43] 2025-11-21 16:45:11,181 | INFO     | chi2: 0.051489623262524355
[2025-11-21 11:45:43] 2025-11-21 16:45:11,181 | INFO     | current memory leak: 12.01 B/s (using 795 data points, chi2=0.05)
[2025-11-21 11:45:43] 2025-11-21 16:45:11,183 | INFO     | could have reported an average CPU frequency of 2601 MHz (31 samples)
[2025-11-21 11:45:43] 2025-11-21 16:45:11,183 | INFO     | ..............................
[2025-11-21 11:45:43] 2025-11-21 16:45:11,183 | INFO     | . Timing measurements:
[2025-11-21 11:45:43] 2025-11-21 16:45:11,183 | INFO     | . get job = 0 s
[2025-11-21 11:45:43] 2025-11-21 16:45:11,183 | INFO     | . initial setup = 2 s
[2025-11-21 11:45:43] 2025-11-21 16:45:11,183 | INFO     | . payload setup = 5 s
[2025-11-21 11:45:43] 2025-11-21 16:45:11,183 | INFO     | . stage-in = 0 s
[2025-11-21 11:45:43] 2025-11-21 16:45:11,184 | INFO     | . payload execution = 50677 s
[2025-11-21 11:45:43] 2025-11-21 16:45:11,184 | INFO     | . stage-out = 4 s
[2025-11-21 11:45:43] 2025-11-21 16:45:11,184 | INFO     | . log creation = 1 s
[2025-11-21 11:45:43] 2025-11-21 16:45:11,184 | INFO     | ..............................
[2025-11-21 11:45:43] 2025-11-21 16:45:11,293 | INFO     | 
[2025-11-21 11:45:43] 2025-11-21 16:45:11,293 | INFO     | job summary report
[2025-11-21 11:45:43] 2025-11-21 16:45:11,293 | INFO     | --------------------------------------------------
[2025-11-21 11:45:43] 2025-11-21 16:45:11,293 | INFO     | PanDA job id: 6893873186
[2025-11-21 11:45:43] 2025-11-21 16:45:11,293 | INFO     | task id: 47523449
[2025-11-21 11:45:43] 2025-11-21 16:45:11,293 | INFO     | errors: (none)
[2025-11-21 11:45:43] 2025-11-21 16:45:11,293 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 11:45:43] 2025-11-21 16:45:11,293 | INFO     | pilot state: finished 
[2025-11-21 11:45:43] 2025-11-21 16:45:11,294 | INFO     | transexitcode: 0
[2025-11-21 11:45:43] 2025-11-21 16:45:11,294 | INFO     | exeerrorcode: 0
[2025-11-21 11:45:43] 2025-11-21 16:45:11,294 | INFO     | exeerrordiag: 
[2025-11-21 11:45:43] 2025-11-21 16:45:11,294 | INFO     | exitcode: 0
[2025-11-21 11:45:43] 2025-11-21 16:45:11,294 | INFO     | exitmsg: OK
[2025-11-21 11:45:43] 2025-11-21 16:45:11,294 | INFO     | cpuconsumptiontime: 291294 s
[2025-11-21 11:45:43] 2025-11-21 16:45:11,294 | INFO     | nevents: 1000
[2025-11-21 11:45:43] 2025-11-21 16:45:11,294 | INFO     | neventsw: 0
[2025-11-21 11:45:43] 2025-11-21 16:45:11,294 | INFO     | pid: 2343540
[2025-11-21 11:45:43] 2025-11-21 16:45:11,295 | INFO     | pgrp: 2343540
[2025-11-21 11:45:43] 2025-11-21 16:45:11,295 | INFO     | corecount: 9
[2025-11-21 11:45:43] 2025-11-21 16:45:11,295 | INFO     | event service: False
[2025-11-21 11:45:43] 2025-11-21 16:45:11,295 | INFO     | sizes: {0: 2297978, 1: 2298834, 5: 2299096, 12: 2299152, 50683: 2347379, 50684: 2347378, 50689: 2356612, 50694: 2356802}
[2025-11-21 11:45:43] 2025-11-21 16:45:11,295 | INFO     | --------------------------------------------------
[2025-11-21 11:45:43] 2025-11-21 16:45:11,295 | INFO     | 
[2025-11-21 11:45:43] 2025-11-21 16:45:11,295 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-21 11:45:43] 2025-11-21 16:45:11,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,316 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,316 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 11:45:43] 2025-11-21 16:45:11,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 11:45:43] 2025-11-21 16:45:11,317 | INFO     | job 6893873186 has completed (purged errors)
[2025-11-21 11:45:43] 2025-11-21 16:45:11,317 | INFO     | overall cleanup function is called
[2025-11-21 11:45:43] 2025-11-21 16:45:12,334 | INFO     | --- collectZombieJob: --- 10, [2343540]
[2025-11-21 11:45:43] 2025-11-21 16:45:12,335 | INFO     | zombie collector waiting for pid 2343540
[2025-11-21 11:45:43] 2025-11-21 16:45:12,335 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 11:45:43] 2025-11-21 16:45:12,335 | INFO     | collected zombie processes
[2025-11-21 11:45:43] 2025-11-21 16:45:12,335 | INFO     | will attempt to kill all subprocesses of pid=2343540
[2025-11-21 11:45:43] 2025-11-21 16:45:12,592 | INFO     | process IDs to be killed: [2343540] (in reverse order)
[2025-11-21 11:45:43] 2025-11-21 16:45:12,669 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 11:45:43] 2025-11-21 16:45:12,669 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 11:45:43] 2025-11-21 16:45:12,677 | INFO     | did not find any defunct processes belonging to 2343540
[2025-11-21 11:45:43] 2025-11-21 16:45:12,684 | INFO     | did not find any defunct processes belonging to 2343540
[2025-11-21 11:45:43] 2025-11-21 16:45:12,685 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 11:45:43] 2025-11-21 16:45:12,686 | INFO     | ready for new job
[2025-11-21 11:45:43] 2025-11-21 16:45:12,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 11:45:43] 2025-11-21 16:45:12,693 | INFO     | ***************************************
[2025-11-21 11:45:43] 2025-11-21 16:45:12,694 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 11:45:43] 2025-11-21 16:45:12,694 | INFO     | ***************************************
[2025-11-21 11:45:43] 2025-11-21 16:45:12,694 | INFO     | 
[2025-11-21 11:45:43] 2025-11-21 16:45:12,696 | INFO     | architecture information:
[2025-11-21 11:45:43] 2025-11-21 16:45:12,696 | INFO     | executing command: cat /etc/os-release
[2025-11-21 11:45:43] 2025-11-21 16:45:12,714 | INFO     | cat /etc/os-release:
[2025-11-21 11:45:43] NAME="CentOS Linux"
[2025-11-21 11:45:43] VERSION="7 (Core)"
[2025-11-21 11:45:43] ID="centos"
[2025-11-21 11:45:43] ID_LIKE="rhel fedora"
[2025-11-21 11:45:43] VERSION_ID="7"
[2025-11-21 11:45:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 11:45:43] ANSI_COLOR="0;31"
[2025-11-21 11:45:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 11:45:43] HOME_URL="https://www.centos.org/"
[2025-11-21 11:45:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 11:45:43] 
[2025-11-21 11:45:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 11:45:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 11:45:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 11:45:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 11:45:43] 
[2025-11-21 11:45:43] 2025-11-21 16:45:12,715 | INFO     | ***************************************
[2025-11-21 11:45:43] 2025-11-21 16:45:13,218 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-21 11:45:43] 2025-11-21 16:45:13,255 | INFO     | sufficient remaining disk space (46989836288 B)
[2025-11-21 11:45:43] 2025-11-21 16:45:13,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 11:45:43] 2025-11-21 16:45:13,255 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 11:45:43] 2025-11-21 16:45:13,256 | INFO     | update_server=False
[2025-11-21 11:45:43] 2025-11-21 16:45:13,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 11:45:43] 2025-11-21 16:45:13,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:45:43] 2025-11-21 16:45:13,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:45:43] 2025-11-21 16:45:13,504 | INFO     | aborting loop
[2025-11-21 11:45:43] 2025-11-21 16:45:13,710 | INFO     | all data control threads have been joined
[2025-11-21 11:45:43] 2025-11-21 16:45:13,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 11:45:43] 2025-11-21 16:45:14,235 | INFO     | all payload control threads have been joined
[2025-11-21 11:45:43] 2025-11-21 16:45:14,261 | INFO     | [job] retrieve thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:14,264 | INFO     | [job] queue monitor thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:14,357 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:14,422 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:14,510 | INFO     | [job] job monitor thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:14,515 | INFO     | all job control threads have been joined
[2025-11-21 11:45:43] 2025-11-21 16:45:14,648 | INFO     | [payload] failed_post thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:14,716 | INFO     | [data] control thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:14,882 | INFO     | [payload] validate_post thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:15,207 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:15,241 | INFO     | [payload] control thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:15,300 | INFO     | [data] copytool_in thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:15,367 | INFO     | [job] validate thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:15,520 | INFO     | [job] control thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:15,689 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:15,803 | INFO     | [data] copytool_out thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:16,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 11:45:43] 2025-11-21 16:45:20,404 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 11:45:43] 2025-11-21 16:45:29,301 | INFO     | [monitor] cgroup control has ended
[2025-11-21 11:45:43] 2025-11-21 16:45:31,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357706020672)>', '<ExcThread(monitor, started 140357341783808)>']
[2025-11-21 11:45:43] 2025-11-21 16:45:36,326 | INFO     | all workflow threads have been joined
[2025-11-21 11:45:43] 2025-11-21 16:45:36,326 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 11:45:43] 2025-11-21 16:45:36,326 | INFO     | traces error code: 0
[2025-11-21 11:45:43] 2025-11-21 16:45:36,327 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 11:45:43] 2025-11-21 16:45:43,526 | INFO     | PID=2335602 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 11:45:43] 2025-11-21 16:45:43,526 | INFO     | .. there are 9 such processes running
[2025-11-21 11:45:43] 2025-11-21 16:45:43,527 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 11:45:43] 2025-11-21 16:45:43,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 11:45:43] 2025-11-21 16:45:43,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 11:45:43] 2025-11-21 16:45:43,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 11:45:43] 2025-11-21 16:45:43,527 | INFO     | [monitor] control thread has ended
[2025-11-21 11:45:43] 2025-11-21 16:45:43,664 [wrapper] ==== pilot stdout END ====
[2025-11-21 11:45:43] 2025-11-21 16:45:43,666 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 11:45:43] 2025-11-21 16:45:43,669 [wrapper] pilotpid: 2335602
[2025-11-21 11:45:43] 2025-11-21 16:45:43,671 [wrapper] Pilot exit status: 0
[2025-11-21 11:45:43] 2025-11-21 16:45:43,683 [wrapper] pandaids: 6893873186
[2025-11-21 11:45:43] 2025-11-21 16:45:43,728 [wrapper] cleanup supervisor_pilot 3588918 2335603
[2025-11-21 11:45:43] 2025-11-21 16:45:43,731 [wrapper] Test setup, not cleaning
[2025-11-21 11:45:43] 2025-11-21 16:45:43,734 [wrapper] apfmon messages muted
[2025-11-21 11:45:43] 2025-11-21 16:45:43,736 [wrapper] ==== wrapper stdout END ====
[2025-11-21 11:45:43] 2025-11-21 16:45:43,738 [wrapper] ==== wrapper stderr END ====
[2025-11-21 11:45:43]  *** Error codes and diagnostics ***
[2025-11-21 11:45:43]     "exeErrorCode": 0,
[2025-11-21 11:45:43]     "exeErrorDiag": "",
[2025-11-21 11:45:43]     "pilotErrorCode": 0,
[2025-11-21 11:45:43]     "pilotErrorDiag": "",
[2025-11-21 11:45:43]  *** Listing of results directory ***
[2025-11-21 11:45:43] total 1312212
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 10:07 pilot3.tar.gz
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 10:23 queuedata.json
[2025-11-21 11:45:43] -rwx------. 1 boincer umatlas     36292 Nov 20 10:24 runpilot2-wrapper.sh
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas       100 Nov 20 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 11:45:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 21:39 run_atlas
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas       105 Nov 20 21:39 job.xml
[2025-11-21 11:45:43] -rw-r--r--. 2 boincer umatlas 410899148 Nov 20 21:39 EVNT.47493127._000691.pool.root.1
[2025-11-21 11:45:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 21:39 start_atlas.sh
[2025-11-21 11:45:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 21:39 shared
[2025-11-21 11:45:43] -rw-r--r--. 2 boincer umatlas    590100 Nov 20 21:39 input.tar.gz
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas         0 Nov 20 21:39 boinc_lockfile
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas      2785 Nov 20 21:39 pandaJob.out
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas        57 Nov 20 21:39 setup.sh.local
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas    989817 Nov 20 21:40 agis_schedconf.cvmfs.json
[2025-11-21 11:45:43] drwx------. 5 boincer umatlas      4096 Nov 20 21:40 pilot3
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas       533 Nov 21 11:33 boinc_task_state.xml
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas      6660 Nov 21 11:38 init_data.xml
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas 910669535 Nov 21 11:44 HITS.47523449._006908.pool.root.1
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas        95 Nov 21 11:44 pilot_heartbeat.json
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas      1053 Nov 21 11:45 memory_monitor_summary.json
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas   1526164 Nov 21 11:45 agis_ddmendpoints.agis.ALL.json
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas   2160694 Nov 21 11:45 log.47523449._006908.job.log.tgz.1
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas      8614 Nov 21 11:45 heartbeat.json
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 11:45 boinc_mmap_file
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas        29 Nov 21 11:45 wrapper_checkpoint.txt
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas       822 Nov 21 11:45 pilotlog.txt
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas   6945274 Nov 21 11:45 log.47523449._006908.job.log.1
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas       353 Nov 21 11:45 output.list
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas       620 Nov 21 11:45 runtime_log
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas   9123840 Nov 21 11:45 result.tar.gz
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 11:45 runtime_log.err
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas       660 Nov 21 11:45 nQJNDmghLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfDIKDmDIHmIm.diag
[2025-11-21 11:45:43] -rw-r--r--. 1 boincer umatlas     21138 Nov 21 11:45 stderr.txt
[2025-11-21 11:45:43] HITS file was successfully produced:
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas 910669535 Nov 21 11:44 shared/HITS.pool.root.1
[2025-11-21 11:45:43]  *** Contents of shared directory: ***
[2025-11-21 11:45:43] total 1300116
[2025-11-21 11:45:43] -rw-r--r--. 2 boincer umatlas 410899148 Nov 20 21:39 ATLAS.root_0
[2025-11-21 11:45:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 21:39 start_atlas.sh
[2025-11-21 11:45:43] -rw-r--r--. 2 boincer umatlas    590100 Nov 20 21:39 input.tar.gz
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas 910669535 Nov 21 11:44 HITS.pool.root.1
[2025-11-21 11:45:43] -rw-------. 1 boincer umatlas   9123840 Nov 21 11:45 result.tar.gz
11:45:45 (2331866): run_atlas exited; CPU time 291408.019530
11:45:45 (2331866): called boinc_finish(0)

</stderr_txt>
]]>

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