Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:40:16 (2551160): wrapper (7.7.26015): starting
20:40:16 (2551160): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 20:40:16] Arguments: --nthreads 3
[2025-11-23 20:40:16] Threads: 3
[2025-11-23 20:40:16] Checking for CVMFS
[2025-11-23 20:40:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 20:40:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 20:40:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 20:40:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 20:40:16] 2.9.2.0 1502042 7983 73948 153219 1 81 35011345 36864001 0 130560 0 2851269 99.813 540719 6792 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 20:40:16] CVMFS is ok
[2025-11-23 20:40:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 20:40:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 20:40:16] Further information can be found at the LHC@home message board.
[2025-11-23 20:40:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 20:40:16] Checking for apptainer binary...
[2025-11-23 20:40:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 20:40:16] Running /usr/bin/apptainer --version
[2025-11-23 20:40:16] apptainer version 1.4.1-1.1
[2025-11-23 20:40:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 20:40:16] atlasA223a
[2025-11-23 20:40:16] apptainer works
[2025-11-23 20:40:16] Set ATHENA_PROC_NUMBER=3
[2025-11-23 20:40:16] Set ATHENA_CORE_NUMBER=3
[2025-11-23 20:40:16] Starting ATLAS job with PandaID=6893873180
[2025-11-23 20:40:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 05:33:15]  *** The last 200 lines of the pilot log: ***
[2025-11-24 05:33:15] 2025-11-24 04:32:37,239 | INFO     | cat /etc/os-release:
[2025-11-24 05:33:15] NAME="CentOS Linux"
[2025-11-24 05:33:15] VERSION="7 (Core)"
[2025-11-24 05:33:15] ID="centos"
[2025-11-24 05:33:15] ID_LIKE="rhel fedora"
[2025-11-24 05:33:15] VERSION_ID="7"
[2025-11-24 05:33:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 05:33:15] ANSI_COLOR="0;31"
[2025-11-24 05:33:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 05:33:15] HOME_URL="https://www.centos.org/"
[2025-11-24 05:33:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 05:33:15] 
[2025-11-24 05:33:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 05:33:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 05:33:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 05:33:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 05:33:15] 
[2025-11-24 05:33:15] 2025-11-24 04:32:37,239 | INFO     | ***************************************
[2025-11-24 05:33:15] 2025-11-24 04:32:37,742 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 05:33:15] 2025-11-24 04:32:37,757 | INFO     | sufficient remaining disk space (321983086592 B)
[2025-11-24 05:33:15] 2025-11-24 04:32:37,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 05:33:15] 2025-11-24 04:32:37,757 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 05:33:15] 2025-11-24 04:32:37,757 | INFO     | update_server=False
[2025-11-24 05:33:15] 2025-11-24 04:32:37,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 05:33:15] 2025-11-24 04:32:37,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:33:15] 2025-11-24 04:32:37,757 | INFO     | aborting loop
[2025-11-24 05:33:15] 2025-11-24 04:32:37,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:33:15] 2025-11-24 04:32:38,042 | INFO     | all job control threads have been joined
[2025-11-24 05:33:15] 2025-11-24 04:32:38,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 05:33:15] 2025-11-24 04:32:38,097 | INFO     | all payload control threads have been joined
[2025-11-24 05:33:15] 2025-11-24 04:32:38,230 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 05:33:15] 2025-11-24 04:32:38,293 | INFO     | all data control threads have been joined
[2025-11-24 05:33:15] 2025-11-24 04:32:38,763 | INFO     | [job] retrieve thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:38,764 | INFO     | [job] job monitor thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:38,765 | INFO     | [job] queue monitor thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:39,004 | INFO     | [job] validate thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:39,048 | INFO     | [job] control thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:39,103 | INFO     | [payload] control thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:39,176 | INFO     | [payload] failed_post thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:39,192 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:39,299 | INFO     | [data] control thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:39,360 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:39,569 | INFO     | [payload] validate_post thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:39,915 | INFO     | [data] copytool_in thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:40,075 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:40,083 | INFO     | [data] copytool_out thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:42,236 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:32:47,988 | INFO     | job.realtimelogging is not enabled
[2025-11-24 05:33:15] 2025-11-24 04:32:48,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 05:33:15] 2025-11-24 04:33:08,800 | INFO     | PID=2554883 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 05:33:15] 2025-11-24 04:33:08,801 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 05:33:15] 2025-11-24 04:33:08,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 05:33:15] 2025-11-24 04:33:08,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 05:33:15] 2025-11-24 04:33:09,995 | INFO     | [monitor] cgroup control has ended
[2025-11-24 05:33:15] 2025-11-24 04:33:10,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204844517184)>', '<ExcThread(monitor, started 140204358752000)>']
[2025-11-24 05:33:15] 2025-11-24 04:33:10,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 05:33:15] 2025-11-24 04:33:10,812 | INFO     | [monitor] control thread has ended
[2025-11-24 05:33:15] 2025-11-24 04:33:15,320 | INFO     | all workflow threads have been joined
[2025-11-24 05:33:15] 2025-11-24 04:33:15,320 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 05:33:15] 2025-11-24 04:33:15,321 | INFO     | traces error code: 0
[2025-11-24 05:33:15] 2025-11-24 04:33:15,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 05:33:15] 2025-11-24 04:33:15,368 [wrapper] ==== pilot stdout END ====
[2025-11-24 05:33:15] 2025-11-24 04:33:15,372 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 05:33:15] 2025-11-24 04:33:15,374 [wrapper] pilotpid: 2554883
[2025-11-24 05:33:15] 2025-11-24 04:33:15,377 [wrapper] Pilot exit status: 0
[2025-11-24 05:33:15] 2025-11-24 04:33:15,385 [wrapper] pandaids: 6893873180
[2025-11-24 05:33:15] 2025-11-24 04:33:15,401 [wrapper] cleanup supervisor_pilot 2620683 2554884
[2025-11-24 05:33:15] 2025-11-24 04:33:15,404 [wrapper] Test setup, not cleaning
[2025-11-24 05:33:15] 2025-11-24 04:33:15,407 [wrapper] apfmon messages muted
[2025-11-24 05:33:15] 2025-11-24 04:33:15,410 [wrapper] ==== wrapper stdout END ====
[2025-11-24 05:33:15] 2025-11-24 04:33:15,413 [wrapper] ==== wrapper stderr END ====
[2025-11-24 05:33:15]  *** Error codes and diagnostics ***
[2025-11-24 05:33:15]     "exeErrorCode": 0,
[2025-11-24 05:33:15]     "exeErrorDiag": "",
[2025-11-24 05:33:15]     "pilotErrorCode": 0,
[2025-11-24 05:33:15]     "pilotErrorDiag": "",
[2025-11-24 05:33:15]  *** Listing of results directory ***
[2025-11-24 05:33:15] total 1317176
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc    576529 Nov 20 16:07 pilot3.tar.gz
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc      5112 Nov 20 16:23 queuedata.json
[2025-11-24 05:33:15] -rwx------ 1 boinc boinc     36292 Nov 20 16:25 runpilot2-wrapper.sh
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc       100 Nov 23 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 05:33:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 20:40 run_atlas
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc       105 Nov 23 20:40 job.xml
[2025-11-24 05:33:15] -rw-r--r-- 2 boinc boinc 410899148 Nov 23 20:40 EVNT.47493127._000691.pool.root.1
[2025-11-24 05:33:15] -rw-r--r-- 2 boinc boinc    590096 Nov 23 20:40 input.tar.gz
[2025-11-24 05:33:15] -rw-r--r-- 2 boinc boinc     15847 Nov 23 20:40 start_atlas.sh
[2025-11-24 05:33:15] drwxrwx--x 2 boinc boinc      4096 Nov 23 20:40 shared
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc         0 Nov 23 20:40 boinc_setup_complete
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc      6198 Nov 23 20:40 init_data.xml
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc         0 Nov 23 20:40 boinc_lockfile
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc      2784 Nov 23 20:40 pandaJob.out
[2025-11-24 05:33:15] -rw------- 1 boinc boinc    989786 Nov 23 20:40 agis_schedconf.cvmfs.json
[2025-11-24 05:33:15] drwx------ 5 boinc boinc      4096 Nov 23 20:40 pilot3
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc       532 Nov 24 05:29 boinc_task_state.xml
[2025-11-24 05:33:15] -rw------- 1 boinc boinc 922587703 Nov 24 05:32 HITS.47523449._006902.pool.root.1
[2025-11-24 05:33:15] -rw------- 1 boinc boinc      1023 Nov 24 05:32 memory_monitor_summary.json
[2025-11-24 05:33:15] -rw------- 1 boinc boinc   1526164 Nov 24 05:32 agis_ddmendpoints.agis.ALL.json
[2025-11-24 05:33:15] -rw------- 1 boinc boinc   1201663 Nov 24 05:32 log.47523449._006902.job.log.tgz.1
[2025-11-24 05:33:15] -rw------- 1 boinc boinc      8569 Nov 24 05:32 heartbeat.json
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc        28 Nov 24 05:32 wrapper_checkpoint.txt
[2025-11-24 05:33:15] -rw------- 1 boinc boinc        95 Nov 24 05:33 pilot_heartbeat.json
[2025-11-24 05:33:15] -rw------- 1 boinc boinc      4824 Nov 24 05:33 pilotlog.txt
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc      8192 Nov 24 05:33 boinc_mmap_file
[2025-11-24 05:33:15] -rw------- 1 boinc boinc   4490860 Nov 24 05:33 log.47523449._006902.job.log.1
[2025-11-24 05:33:15] -rw------- 1 boinc boinc       353 Nov 24 05:33 output.list
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc       620 Nov 24 05:33 runtime_log
[2025-11-24 05:33:15] -rw------- 1 boinc boinc   5713920 Nov 24 05:33 result.tar.gz
[2025-11-24 05:33:15] -rw------- 1 boinc boinc       669 Nov 24 05:33 ymrKDmgiLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvDIKDmqAvaXm.diag
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc      8918 Nov 24 05:33 runtime_log.err
[2025-11-24 05:33:15] -rw-r--r-- 1 boinc boinc      8885 Nov 24 05:33 stderr.txt
[2025-11-24 05:33:15] HITS file was successfully produced:
[2025-11-24 05:33:15] -rw------- 1 boinc boinc 922587703 Nov 24 05:32 shared/HITS.pool.root.1
[2025-11-24 05:33:15]  *** Contents of shared directory: ***
[2025-11-24 05:33:15] total 1308424
[2025-11-24 05:33:15] -rw-r--r-- 2 boinc boinc 410899148 Nov 23 20:40 ATLAS.root_0
[2025-11-24 05:33:15] -rw-r--r-- 2 boinc boinc    590096 Nov 23 20:40 input.tar.gz
[2025-11-24 05:33:15] -rw-r--r-- 2 boinc boinc     15847 Nov 23 20:40 start_atlas.sh
[2025-11-24 05:33:15] -rw------- 1 boinc boinc 922587703 Nov 24 05:32 HITS.pool.root.1
[2025-11-24 05:33:15] -rw------- 1 boinc boinc   5713920 Nov 24 05:33 result.tar.gz
05:33:37 (2551160): run_atlas exited; CPU time 94410.092294
05:33:37 (2551160): called boinc_finish(0)

</stderr_txt>
]]>

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