Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:17:46 (73100): wrapper (7.7.26015): starting
22:17:46 (73100): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 22:17:46] Arguments: --nthreads 4
[2025-11-27 22:17:46] Threads: 4
[2025-11-27 22:17:46] Checking for CVMFS
[2025-11-27 22:17:46] No cvmfs_config command found, will try listing directly
[2025-11-27 22:17:46] CVMFS is ok
[2025-11-27 22:17:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 22:17:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 22:17:46] Further information can be found at the LHC@home message board.
[2025-11-27 22:17:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 22:17:46] Checking for apptainer binary...
[2025-11-27 22:17:46] which: no apptainer in ((null))
[2025-11-27 22:17:46] apptainer is not installed, using version from CVMFS
[2025-11-27 22:17:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 22:17:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-11-27 22:17:47] apptainer works
[2025-11-27 22:17:47] Set ATHENA_PROC_NUMBER=4
[2025-11-27 22:17:47] Set ATHENA_CORE_NUMBER=4
[2025-11-27 22:17:47] Starting ATLAS job with PandaID=6891561625
[2025-11-27 22:17:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
03:41:34 (325294): wrapper (7.7.26015): starting
03:41:34 (325294): wrapper: running run_atlas (--nthreads 4)
[2025-11-28 03:41:34] Arguments: --nthreads 4
[2025-11-28 03:41:34] Threads: 4
[2025-11-28 03:41:34] This job has been restarted, cleaning up previous attempt
[2025-11-28 03:41:34] Checking for CVMFS
[2025-11-28 03:41:34] No cvmfs_config command found, will try listing directly
[2025-11-28 03:41:34] CVMFS is ok
[2025-11-28 03:41:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 03:41:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 03:41:34] Further information can be found at the LHC@home message board.
[2025-11-28 03:41:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 03:41:34] Checking for apptainer binary...
[2025-11-28 03:41:34] which: no apptainer in ((null))
[2025-11-28 03:41:34] apptainer is not installed, using version from CVMFS
[2025-11-28 03:41:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 03:41:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-11-28 03:41:34] apptainer works
[2025-11-28 03:41:34] Set ATHENA_PROC_NUMBER=4
[2025-11-28 03:41:34] Set ATHENA_CORE_NUMBER=4
[2025-11-28 03:41:34] Starting ATLAS job with PandaID=6891561625
[2025-11-28 03:41:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 20:26:18]  *** The last 200 lines of the pilot log: ***
[2025-11-28 20:26:18] 2025-11-28 19:23:39,089 | INFO     | time since job start (60111s) is within the limit (172800.0s)
[2025-11-28 20:26:18] 2025-11-28 19:23:39,092 | INFO     | monitor loop #4321: job 0:6891561625 is in state 'finished'
[2025-11-28 20:26:18] 2025-11-28 19:23:39,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,333 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 20:26:18] 2025-11-28 19:23:40,343 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2581.5845937500003
[2025-11-28 20:26:18] 2025-11-28 19:23:40,355 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6891561625/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,356 | INFO     | extracted standard info from prmon json
[2025-11-28 20:26:18] 2025-11-28 19:23:40,356 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 20:26:18] 2025-11-28 19:23:40,357 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 20:26:18] 2025-11-28 19:23:40,374 | INFO     | fitting pss+swap vs Time
[2025-11-28 20:26:18] 2025-11-28 19:23:40,376 | INFO     | sum of square deviations: 296337360844.9909
[2025-11-28 20:26:18] 2025-11-28 19:23:40,396 | INFO     | sum of deviations: 993760150898.68
[2025-11-28 20:26:18] 2025-11-28 19:23:40,396 | INFO     | mean x: 1764327750.0030458
[2025-11-28 20:26:18] 2025-11-28 19:23:40,397 | INFO     | mean y: 2294627.106598985
[2025-11-28 20:26:18] 2025-11-28 19:23:40,397 | INFO     | intersect: -5914335682.612893
[2025-11-28 20:26:18] 2025-11-28 19:23:40,398 | INFO     | chi2: 3.835505567569336
[2025-11-28 20:26:18] 2025-11-28 19:23:40,400 | INFO     | sum of square deviations: 291847472924.9892
[2025-11-28 20:26:18] 2025-11-28 19:23:40,420 | INFO     | sum of deviations: 1191395711195.5256
[2025-11-28 20:26:18] 2025-11-28 19:23:40,421 | INFO     | mean x: 1764327597.5030613
[2025-11-28 20:26:18] 2025-11-28 19:23:40,421 | INFO     | mean y: 2301337.4918367346
[2025-11-28 20:26:18] 2025-11-28 19:23:40,421 | INFO     | intersect: -7200133248.430767
[2025-11-28 20:26:18] 2025-11-28 19:23:40,422 | INFO     | chi2: 1.89450685037539
[2025-11-28 20:26:18] 2025-11-28 19:23:40,422 | INFO     | current chi2=1.89450685037539 (change=50.60607221133587 %)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,424 | INFO     | sum of square deviations: 287403167254.99054
[2025-11-28 20:26:18] 2025-11-28 19:23:40,443 | INFO     | sum of deviations: 1194873668788.1184
[2025-11-28 20:26:18] 2025-11-28 19:23:40,444 | INFO     | mean x: 1764327445.003077
[2025-11-28 20:26:18] 2025-11-28 19:23:40,444 | INFO     | mean y: 2301454.627692308
[2025-11-28 20:26:18] 2025-11-28 19:23:40,444 | INFO     | intersect: -7332859209.360389
[2025-11-28 20:26:18] 2025-11-28 19:23:40,445 | INFO     | chi2: 1.8540251057165187
[2025-11-28 20:26:18] 2025-11-28 19:23:40,445 | INFO     | current chi2=1.8540251057165187 (change=2.1367958976157784 %)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,445 | INFO     | right removable region: 974
[2025-11-28 20:26:18] 2025-11-28 19:23:40,447 | INFO     | sum of square deviations: 291847471094.9892
[2025-11-28 20:26:18] 2025-11-28 19:23:40,467 | INFO     | sum of deviations: 817262806359.0017
[2025-11-28 20:26:18] 2025-11-28 19:23:40,467 | INFO     | mean x: 1764327902.5030613
[2025-11-28 20:26:18] 2025-11-28 19:23:40,467 | INFO     | mean y: 2300611.4989795918
[2025-11-28 20:26:18] 2025-11-28 19:23:40,467 | INFO     | intersect: -4938360918.056758
[2025-11-28 20:26:18] 2025-11-28 19:23:40,469 | INFO     | chi2: 2.095227030712504
[2025-11-28 20:26:18] 2025-11-28 19:23:40,469 | INFO     | current chi2=2.095227030712504 (change=45.37285909767806 %)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,470 | INFO     | sum of square deviations: 287403223617.9964
[2025-11-28 20:26:18] 2025-11-28 19:23:40,490 | INFO     | sum of deviations: 800913779987.0796
[2025-11-28 20:26:18] 2025-11-28 19:23:40,490 | INFO     | mean x: 1764328055.0020514
[2025-11-28 20:26:18] 2025-11-28 19:23:40,490 | INFO     | mean y: 2301171.96
[2025-11-28 20:26:18] 2025-11-28 19:23:40,490 | INFO     | intersect: -4914396121.411841
[2025-11-28 20:26:18] 2025-11-28 19:23:40,491 | INFO     | chi2: 2.0936352016876167
[2025-11-28 20:26:18] 2025-11-28 19:23:40,492 | INFO     | current chi2=2.0936352016876167 (change=0.07597405920951608 %)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,492 | INFO     | left removable region: 20
[2025-11-28 20:26:18] 2025-11-28 19:23:40,493 | INFO     | sum of square deviations: 269229764242.5
[2025-11-28 20:26:18] 2025-11-28 19:23:40,512 | INFO     | sum of deviations: 992009944801.5002
[2025-11-28 20:26:18] 2025-11-28 19:23:40,512 | INFO     | mean x: 1764328024.5
[2025-11-28 20:26:18] 2025-11-28 19:23:40,512 | INFO     | mean y: 2308290.8605870022
[2025-11-28 20:26:18] 2025-11-28 19:23:40,513 | INFO     | intersect: -6498573775.876734
[2025-11-28 20:26:18] 2025-11-28 19:23:40,514 | INFO     | chi2: 0.08845905577782708
[2025-11-28 20:26:18] 2025-11-28 19:23:40,514 | INFO     | current memory leak: 3.68 B/s (using 954 data points, chi2=0.09)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,515 | INFO     | could have reported an average CPU frequency of 2622 MHz (37 samples)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,515 | INFO     | ..............................
[2025-11-28 20:26:18] 2025-11-28 19:23:40,515 | INFO     | . Timing measurements:
[2025-11-28 20:26:18] 2025-11-28 19:23:40,515 | INFO     | . get job = 0 s
[2025-11-28 20:26:18] 2025-11-28 19:23:40,516 | INFO     | . initial setup = 1 s
[2025-11-28 20:26:18] 2025-11-28 19:23:40,516 | INFO     | . payload setup = 7 s
[2025-11-28 20:26:18] 2025-11-28 19:23:40,516 | INFO     | . stage-in = 0 s
[2025-11-28 20:26:18] 2025-11-28 19:23:40,516 | INFO     | . payload execution = 60072 s
[2025-11-28 20:26:18] 2025-11-28 19:23:40,516 | INFO     | . stage-out = 2 s
[2025-11-28 20:26:18] 2025-11-28 19:23:40,516 | INFO     | . log creation = 0 s
[2025-11-28 20:26:18] 2025-11-28 19:23:40,516 | INFO     | ..............................
[2025-11-28 20:26:18] 2025-11-28 19:23:40,736 | INFO     | 
[2025-11-28 20:26:18] 2025-11-28 19:23:40,737 | INFO     | job summary report
[2025-11-28 20:26:18] 2025-11-28 19:23:40,737 | INFO     | --------------------------------------------------
[2025-11-28 20:26:18] 2025-11-28 19:23:40,737 | INFO     | PanDA job id: 6891561625
[2025-11-28 20:26:18] 2025-11-28 19:23:40,737 | INFO     | task id: 47493068
[2025-11-28 20:26:18] 2025-11-28 19:23:40,737 | INFO     | errors: (none)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,737 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 20:26:18] 2025-11-28 19:23:40,737 | INFO     | pilot state: finished 
[2025-11-28 20:26:18] 2025-11-28 19:23:40,737 | INFO     | transexitcode: 0
[2025-11-28 20:26:18] 2025-11-28 19:23:40,737 | INFO     | exeerrorcode: 0
[2025-11-28 20:26:18] 2025-11-28 19:23:40,737 | INFO     | exeerrordiag: 
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | exitcode: 0
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | exitmsg: OK
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | cpuconsumptiontime: 238401 s
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | nevents: 1000
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | neventsw: 0
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | pid: 336452
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | pgrp: 336452
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | corecount: 4
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | event service: False
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | sizes: {0: 2284084, 1: 2284339, 6: 2284601, 12: 2284629, 60083: 2336876, 60086: 2345892, 60087: 2346076, 60096: 2346322}
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | --------------------------------------------------
[2025-11-28 20:26:18] 2025-11-28 19:23:40,738 | INFO     | 
[2025-11-28 20:26:18] 2025-11-28 19:23:40,739 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-28 20:26:18] 2025-11-28 19:23:40,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 20:26:18] 2025-11-28 19:23:40,762 | INFO     | job 6891561625 has completed (purged errors)
[2025-11-28 20:26:18] 2025-11-28 19:23:40,762 | INFO     | overall cleanup function is called
[2025-11-28 20:26:18] 2025-11-28 19:23:41,776 | INFO     | --- collectZombieJob: --- 10, [336452]
[2025-11-28 20:26:18] 2025-11-28 19:23:41,776 | INFO     | zombie collector waiting for pid 336452
[2025-11-28 20:26:18] 2025-11-28 19:23:41,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 20:26:18] 2025-11-28 19:23:41,776 | INFO     | collected zombie processes
[2025-11-28 20:26:18] 2025-11-28 19:23:41,776 | INFO     | will attempt to kill all subprocesses of pid=336452
[2025-11-28 20:26:18] 2025-11-28 19:23:42,160 | INFO     | process IDs to be killed: [336452] (in reverse order)
[2025-11-28 20:26:18] 2025-11-28 19:23:42,273 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 20:26:18] 2025-11-28 19:23:42,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 20:26:18] 2025-11-28 19:23:42,287 | INFO     | did not find any defunct processes belonging to 336452
[2025-11-28 20:26:18] 2025-11-28 19:23:42,301 | INFO     | did not find any defunct processes belonging to 336452
[2025-11-28 20:26:18] 2025-11-28 19:23:42,303 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 20:26:18] 2025-11-28 19:23:42,303 | INFO     | ready for new job
[2025-11-28 20:26:18] 2025-11-28 19:23:42,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 20:26:18] 2025-11-28 19:23:42,308 | INFO     | ***************************************
[2025-11-28 20:26:18] 2025-11-28 19:23:42,309 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 20:26:18] 2025-11-28 19:23:42,309 | INFO     | ***************************************
[2025-11-28 20:26:18] 2025-11-28 19:23:42,309 | INFO     | 
[2025-11-28 20:26:18] 2025-11-28 19:23:42,313 | INFO     | architecture information:
[2025-11-28 20:26:18] 2025-11-28 19:23:42,313 | INFO     | executing command: cat /etc/os-release
[2025-11-28 20:26:18] 2025-11-28 19:23:42,331 | INFO     | cat /etc/os-release:
[2025-11-28 20:26:18] NAME="CentOS Linux"
[2025-11-28 20:26:18] VERSION="7 (Core)"
[2025-11-28 20:26:18] ID="centos"
[2025-11-28 20:26:18] ID_LIKE="rhel fedora"
[2025-11-28 20:26:18] VERSION_ID="7"
[2025-11-28 20:26:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 20:26:18] ANSI_COLOR="0;31"
[2025-11-28 20:26:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 20:26:18] HOME_URL="https://www.centos.org/"
[2025-11-28 20:26:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 20:26:18] 
[2025-11-28 20:26:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 20:26:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 20:26:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 20:26:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 20:26:18] 
[2025-11-28 20:26:18] 2025-11-28 19:23:42,331 | INFO     | ***************************************
[2025-11-28 20:26:18] 2025-11-28 19:23:42,834 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-28 20:26:18] 2025-11-28 19:23:42,850 | INFO     | sufficient remaining disk space (650078322688 B)
[2025-11-28 20:26:18] 2025-11-28 19:23:42,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 20:26:18] 2025-11-28 19:23:42,851 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 20:26:18] 2025-11-28 19:23:42,851 | INFO     | update_server=False
[2025-11-28 20:26:18] 2025-11-28 19:23:42,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 20:26:18] 2025-11-28 19:23:42,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 20:26:18] 2025-11-28 19:23:42,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 20:26:18] 2025-11-28 19:23:42,852 | INFO     | aborting loop
[2025-11-28 20:26:18] 2025-11-28 19:23:43,318 | INFO     | all payload control threads have been joined
[2025-11-28 20:26:18] 2025-11-28 19:23:43,426 | INFO     | all data control threads have been joined
[2025-11-28 20:26:18] 2025-11-28 19:23:43,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 20:26:18] 2025-11-28 19:23:43,856 | INFO     | [job] retrieve thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:43,857 | INFO     | [job] job monitor thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:44,044 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:44,138 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:44,216 | INFO     | all job control threads have been joined
[2025-11-28 20:26:18] 2025-11-28 19:23:44,323 | INFO     | [payload] control thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:44,431 | INFO     | [data] control thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:44,569 | INFO     | [data] copytool_in thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:44,678 | INFO     | [job] validate thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:45,160 | INFO     | [payload] failed_post thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:45,180 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:45,180 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:45,221 | INFO     | [job] control thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:45,236 | INFO     | [payload] validate_post thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:45,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 20:26:18] 2025-11-28 19:23:45,825 | INFO     | [data] copytool_out thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:46,626 | INFO     | [job] queue monitor thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:23:46,855 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 20:26:18] 2025-11-28 19:24:12,682 | INFO     | PID=329390 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-28 20:26:18] 2025-11-28 19:24:12,683 | INFO     | .. there are 3 such processes running
[2025-11-28 20:26:18] 2025-11-28 19:24:12,683 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 20:26:18] 2025-11-28 19:24:12,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 20:26:18] 2025-11-28 19:24:12,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 20:26:18] 2025-11-28 19:24:22,761 | INFO     | [monitor] cgroup control has ended
[2025-11-28 20:26:18] 2025-11-28 19:24:24,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22996098459456)>', '<ExcThread(monitor, started 22995380713216)>']
[2025-11-28 20:26:18] 2025-11-28 19:24:24,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 20:26:18] 2025-11-28 19:24:24,735 | INFO     | [monitor] control thread has ended
[2025-11-28 20:26:18] 2025-11-28 19:24:29,522 | INFO     | all workflow threads have been joined
[2025-11-28 20:26:18] 2025-11-28 19:24:29,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 20:26:18] 2025-11-28 19:24:29,522 | INFO     | traces error code: 0
[2025-11-28 20:26:18] 2025-11-28 19:24:29,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 20:26:18] 2025-11-28 19:24:29,692 [wrapper] ==== pilot stdout END ====
[2025-11-28 20:26:18] 2025-11-28 19:24:29,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 20:26:18] 2025-11-28 19:24:29,698 [wrapper] pilotpid: 329390
[2025-11-28 20:26:18] 2025-11-28 19:24:29,700 [wrapper] Pilot exit status: 0
[2025-11-28 20:26:18] 2025-11-28 19:24:29,710 [wrapper] pandaids: 6891561625 6891561625
[2025-11-28 20:26:18] 2025-11-28 19:24:29,781 [wrapper] cleanup supervisor_pilot 1116425 329391
[2025-11-28 20:26:18] 2025-11-28 19:24:29,785 [wrapper] Test setup, not cleaning
[2025-11-28 20:26:18] 2025-11-28 19:24:29,787 [wrapper] apfmon messages muted
[2025-11-28 20:26:18] 2025-11-28 19:24:29,790 [wrapper] ==== wrapper stdout END ====
[2025-11-28 20:26:18] 2025-11-28 19:24:29,792 [wrapper] ==== wrapper stderr END ====
[2025-11-28 20:26:18]  *** Error codes and diagnostics ***
[2025-11-28 20:26:18]     "exeErrorCode": 0,
[2025-11-28 20:26:18]     "exeErrorDiag": "",
[2025-11-28 20:26:18]     "pilotErrorCode": 0,
[2025-11-28 20:26:18]     "pilotErrorDiag": "",
[2025-11-28 20:26:18]  *** Listing of results directory ***
[2025-11-28 20:26:18] total 1736780
[2025-11-28 20:26:18] drwx------ 5 boinc boinc      4096 Nov  5 18:16 pilot3
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-28 20:26:18] -rwx------ 1 boinc boinc     36292 Nov 18 16:27 runpilot2-wrapper.sh
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:27 queuedata.json
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc       100 Nov 27 22:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 20:26:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 22:17 run_atlas
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc       105 Nov 27 22:17 job.xml
[2025-11-28 20:26:18] -rw-r--r-- 3 boinc boinc 409879611 Nov 27 22:17 EVNT.47493065._000090.pool.root.1
[2025-11-28 20:26:18] -rw-r--r-- 3 boinc boinc 409879611 Nov 27 22:17 ATLAS.root_0
[2025-11-28 20:26:18] drwxrwx--x 2 boinc boinc      4096 Nov 27 22:17 shared
[2025-11-28 20:26:18] -rw-r--r-- 2 boinc boinc    590095 Nov 27 22:17 input.tar.gz
[2025-11-28 20:26:18] -rw-r--r-- 2 boinc boinc     15120 Nov 27 22:17 start_atlas.sh
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc         0 Nov 27 22:17 boinc_lockfile
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc      2771 Nov 28 03:41 pandaJob.out
[2025-11-28 20:26:18] -rw------- 1 boinc boinc    991842 Nov 28 03:41 agis_schedconf.cvmfs.json
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc      6642 Nov 28 08:20 init_data.xml
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc       532 Nov 28 20:16 boinc_task_state.xml
[2025-11-28 20:26:18] -rw------- 1 boinc boinc 934501635 Nov 28 20:22 HITS.47493068._000895.pool.root.1
[2025-11-28 20:26:18] -rw------- 1 boinc boinc      1057 Nov 28 20:23 memory_monitor_summary.json
[2025-11-28 20:26:18] -rw------- 1 boinc boinc   1516240 Nov 28 20:23 agis_ddmendpoints.agis.ALL.json
[2025-11-28 20:26:18] -rw------- 1 boinc boinc   1726147 Nov 28 20:23 log.47493068._000895.job.log.tgz.1
[2025-11-28 20:26:18] -rw------- 1 boinc boinc      8646 Nov 28 20:23 heartbeat.json
[2025-11-28 20:26:18] -rw------- 1 boinc boinc        97 Nov 28 20:24 pilot_heartbeat.json
[2025-11-28 20:26:18] -rw------- 1 boinc boinc      4832 Nov 28 20:24 pilotlog.txt
[2025-11-28 20:26:18] -rw------- 1 boinc boinc   8410821 Nov 28 20:24 log.47493068._000895.job.log.1
[2025-11-28 20:26:18] -rw------- 1 boinc boinc       353 Nov 28 20:24 output.list
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc       620 Nov 28 20:24 runtime_log
[2025-11-28 20:26:18] -rw------- 1 boinc boinc  10158080 Nov 28 20:24 result.tar.gz
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc      9147 Nov 28 20:24 runtime_log.err
[2025-11-28 20:26:18] -rw------- 1 boinc boinc       799 Nov 28 20:24 MQUNDmRncf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRPFKDmRP0S8m.diag
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc        28 Nov 28 20:25 wrapper_checkpoint.txt
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc      8192 Nov 28 20:26 boinc_mmap_file
[2025-11-28 20:26:18] -rw-r--r-- 1 boinc boinc     23001 Nov 28 20:26 stderr.txt
[2025-11-28 20:26:18] HITS file was successfully produced:
[2025-11-28 20:26:18] -rw------- 1 boinc boinc 934501635 Nov 28 20:22 shared/HITS.pool.root.1
[2025-11-28 20:26:18]  *** Contents of shared directory: ***
[2025-11-28 20:26:18] total 1323400
[2025-11-28 20:26:18] -rw-r--r-- 3 boinc boinc 409879611 Nov 27 22:17 ATLAS.root_0
[2025-11-28 20:26:18] -rw-r--r-- 2 boinc boinc    590095 Nov 27 22:17 input.tar.gz
[2025-11-28 20:26:18] -rw-r--r-- 2 boinc boinc     15120 Nov 27 22:17 start_atlas.sh
[2025-11-28 20:26:18] -rw------- 1 boinc boinc 934501635 Nov 28 20:22 HITS.pool.root.1
[2025-11-28 20:26:18] -rw------- 1 boinc boinc  10158080 Nov 28 20:24 result.tar.gz
20:26:20 (325294): run_atlas exited; CPU time 240800.903625
20:26:20 (325294): called boinc_finish(0)

</stderr_txt>
]]>

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