Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:09:07 (27489): wrapper (7.7.26015): starting
06:09:07 (27489): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 06:09:07] Arguments: --nthreads 8
[2025-11-24 06:09:07] Threads: 8
[2025-11-24 06:09:07] Checking for CVMFS
[2025-11-24 06:09:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 06:09:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 06:09:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 06:09:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 06:09:09] 2.11.2.0 32446 168856 138808 153233 1 85 21633065 25165824 4632 130560 2 58100722 99.904 25349169 2397 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 06:09:09] CVMFS is ok
[2025-11-24 06:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 06:09:09] Checking for apptainer binary...
[2025-11-24 06:09:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 06:09:09] Running /usr/bin/apptainer --version
[2025-11-24 06:09:09] apptainer version 1.3.2-1.el7
[2025-11-24 06:09:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 06:09:16] cg-vwn269.simple-grid.lan
[2025-11-24 06:09:16] apptainer works
[2025-11-24 06:09:16] Set ATHENA_PROC_NUMBER=8
[2025-11-24 06:09:16] Set ATHENA_CORE_NUMBER=8
[2025-11-24 06:09:16] Starting ATLAS job with PandaID=6893872274
[2025-11-24 06:09:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:49:43]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:49:43] 2025-11-25 01:48:54,477 | INFO     | monitor loop #4980: job 0:6893872274 is in state 'finished'
[2025-11-25 02:49:43] 2025-11-25 01:48:54,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:49:43] 2025-11-25 01:48:55,796 | INFO     | time since job start (74150s) is within the limit (172800.0s)
[2025-11-25 02:49:43] 2025-11-25 01:48:56,982 | INFO     | monitor loop #4981: job 0:6893872274 is in state 'finished'
[2025-11-25 02:49:43] 2025-11-25 01:48:56,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:49:43] 2025-11-25 01:48:57,810 | INFO     | time since job start (74152s) is within the limit (172800.0s)
[2025-11-25 02:49:43] 2025-11-25 01:48:59,489 | INFO     | monitor loop #4982: job 0:6893872274 is in state 'finished'
[2025-11-25 02:49:43] 2025-11-25 01:48:59,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:49:43] 2025-11-25 01:48:59,818 | INFO     | time since job start (74154s) is within the limit (172800.0s)
[2025-11-25 02:49:43] 2025-11-25 01:49:01,834 | INFO     | time since job start (74156s) is within the limit (172800.0s)
[2025-11-25 02:49:43] 2025-11-25 01:49:01,997 | INFO     | monitor loop #4983: job 0:6893872274 is in state 'finished'
[2025-11-25 02:49:43] 2025-11-25 01:49:01,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:49:43] 2025-11-25 01:49:03,840 | INFO     | time since job start (74158s) is within the limit (172800.0s)
[2025-11-25 02:49:43] 2025-11-25 01:49:04,511 | INFO     | monitor loop #4984: job 0:6893872274 is in state 'finished'
[2025-11-25 02:49:43] 2025-11-25 01:49:04,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:49:43] 2025-11-25 01:49:05,677 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 02:49:43] 2025-11-25 01:49:05,678 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 02:49:43] 2025-11-25 01:49:05,680 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6893872274/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 02:49:43] 2025-11-25 01:49:05,681 | INFO     | extracted standard info from prmon json
[2025-11-25 02:49:43] 2025-11-25 01:49:05,681 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 02:49:43] 2025-11-25 01:49:05,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:49:43] 2025-11-25 01:49:05,706 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:49:43] 2025-11-25 01:49:05,708 | INFO     | sum of square deviations: 546616328377.7883
[2025-11-25 02:49:43] 2025-11-25 01:49:05,749 | INFO     | sum of deviations: 834078262840.1254
[2025-11-25 02:49:43] 2025-11-25 01:49:05,750 | INFO     | mean x: 1763998419.513245
[2025-11-25 02:49:43] 2025-11-25 01:49:05,750 | INFO     | mean y: 2862219.461092715
[2025-11-25 02:49:43] 2025-11-25 01:49:05,750 | INFO     | intersect: -2688811375.008356
[2025-11-25 02:49:43] 2025-11-25 01:49:05,752 | INFO     | chi2: 18.801818265784586
[2025-11-25 02:49:43] 2025-11-25 01:49:05,754 | INFO     | sum of square deviations: 539857356352.6334
[2025-11-25 02:49:43] 2025-11-25 01:49:05,846 | INFO     | sum of deviations: 1253038008743.422
[2025-11-25 02:49:43] 2025-11-25 01:49:05,846 | INFO     | mean x: 1763998267.0174563
[2025-11-25 02:49:43] 2025-11-25 01:49:05,846 | INFO     | mean y: 2871669.3133832086
[2025-11-25 02:49:43] 2025-11-25 01:49:05,846 | INFO     | intersect: -4091463343.297988
[2025-11-25 02:49:43] 2025-11-25 01:49:05,848 | INFO     | chi2: 15.204363294037869
[2025-11-25 02:49:43] 2025-11-25 01:49:05,848 | INFO     | current chi2=15.204363294037869 (change=19.133548260560204 %)
[2025-11-25 02:49:43] 2025-11-25 01:49:05,848 | INFO     | right removable region: 1202
[2025-11-25 02:49:43] 2025-11-25 01:49:05,903 | INFO     | sum of square deviations: 539856609712.6334
[2025-11-25 02:49:43] 2025-11-25 01:49:05,923 | INFO     | time since job start (74160s) is within the limit (172800.0s)
[2025-11-25 02:49:43] 2025-11-25 01:49:05,945 | INFO     | sum of deviations: 473662773702.4533
[2025-11-25 02:49:43] 2025-11-25 01:49:05,945 | INFO     | mean x: 1763998572.0174563
[2025-11-25 02:49:43] 2025-11-25 01:49:05,945 | INFO     | mean y: 2870346.1213632585
[2025-11-25 02:49:43] 2025-11-25 01:49:05,945 | INFO     | intersect: -1544837770.064738
[2025-11-25 02:49:43] 2025-11-25 01:49:05,947 | INFO     | chi2: 16.466532215242907
[2025-11-25 02:49:43] 2025-11-25 01:49:05,947 | INFO     | current chi2=16.466532215242907 (change=12.420533043824895 %)
[2025-11-25 02:49:43] 2025-11-25 01:49:05,947 | INFO     | left removable region: 10
[2025-11-25 02:49:43] 2025-11-25 01:49:05,949 | INFO     | sum of square deviations: 525183195123.4333
[2025-11-25 02:49:43] 2025-11-25 01:49:06,000 | INFO     | sum of deviations: 894968924364.6997
[2025-11-25 02:49:43] 2025-11-25 01:49:06,000 | INFO     | mean x: 1763998541.521812
[2025-11-25 02:49:43] 2025-11-25 01:49:06,000 | INFO     | mean y: 2883819.4924496645
[2025-11-25 02:49:43] 2025-11-25 01:49:06,000 | INFO     | intersect: -3003160341.7561393
[2025-11-25 02:49:43] 2025-11-25 01:49:06,002 | INFO     | chi2: 12.01103988642147
[2025-11-25 02:49:43] 2025-11-25 01:49:06,002 | INFO     | current memory leak: 1.70 B/s (using 1192 data points, chi2=12.01)
[2025-11-25 02:49:43] 2025-11-25 01:49:06,004 | INFO     | could have reported an average CPU frequency of 1999 MHz (41 samples)
[2025-11-25 02:49:43] 2025-11-25 01:49:06,004 | INFO     | ..............................
[2025-11-25 02:49:43] 2025-11-25 01:49:06,004 | INFO     | . Timing measurements:
[2025-11-25 02:49:43] 2025-11-25 01:49:06,004 | INFO     | . get job = 0 s
[2025-11-25 02:49:43] 2025-11-25 01:49:06,004 | INFO     | . initial setup = 3 s
[2025-11-25 02:49:43] 2025-11-25 01:49:06,004 | INFO     | . payload setup = 163 s
[2025-11-25 02:49:43] 2025-11-25 01:49:06,005 | INFO     | . stage-in = 0 s
[2025-11-25 02:49:43] 2025-11-25 01:49:06,005 | INFO     | . payload execution = 73706 s
[2025-11-25 02:49:43] 2025-11-25 01:49:06,005 | INFO     | . stage-out = 6 s
[2025-11-25 02:49:43] 2025-11-25 01:49:06,005 | INFO     | . log creation = 2 s
[2025-11-25 02:49:43] 2025-11-25 01:49:06,005 | INFO     | ..............................
[2025-11-25 02:49:43] 2025-11-25 01:49:06,469 | INFO     | 
[2025-11-25 02:49:43] 2025-11-25 01:49:06,470 | INFO     | job summary report
[2025-11-25 02:49:43] 2025-11-25 01:49:06,470 | INFO     | --------------------------------------------------
[2025-11-25 02:49:43] 2025-11-25 01:49:06,470 | INFO     | PanDA job id: 6893872274
[2025-11-25 02:49:43] 2025-11-25 01:49:06,470 | INFO     | task id: 47523449
[2025-11-25 02:49:43] 2025-11-25 01:49:06,470 | INFO     | errors: (none)
[2025-11-25 02:49:43] 2025-11-25 01:49:06,470 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:49:43] 2025-11-25 01:49:06,470 | INFO     | pilot state: finished 
[2025-11-25 02:49:43] 2025-11-25 01:49:06,471 | INFO     | transexitcode: 0
[2025-11-25 02:49:43] 2025-11-25 01:49:06,471 | INFO     | exeerrorcode: 0
[2025-11-25 02:49:43] 2025-11-25 01:49:06,471 | INFO     | exeerrordiag: 
[2025-11-25 02:49:43] 2025-11-25 01:49:06,471 | INFO     | exitcode: 0
[2025-11-25 02:49:43] 2025-11-25 01:49:06,471 | INFO     | exitmsg: OK
[2025-11-25 02:49:43] 2025-11-25 01:49:06,471 | INFO     | cpuconsumptiontime: 336640 s
[2025-11-25 02:49:43] 2025-11-25 01:49:06,471 | INFO     | nevents: 1000
[2025-11-25 02:49:43] 2025-11-25 01:49:06,471 | INFO     | neventsw: 0
[2025-11-25 02:49:43] 2025-11-25 01:49:06,471 | INFO     | pid: 5541
[2025-11-25 02:49:43] 2025-11-25 01:49:06,471 | INFO     | pgrp: 5541
[2025-11-25 02:49:43] 2025-11-25 01:49:06,472 | INFO     | corecount: 8
[2025-11-25 02:49:43] 2025-11-25 01:49:06,472 | INFO     | event service: False
[2025-11-25 02:49:43] 2025-11-25 01:49:06,472 | INFO     | sizes: {0: 2298580, 1: 2298835, 12: 2298835, 23: 2298863, 34: 2298891, 44: 2298919, 55: 2299075, 66: 2299103, 77: 2299131, 87: 2299477, 73870: 2355386, 73871: 2355
[2025-11-25 02:49:43] 2025-11-25 01:49:06,472 | INFO     | --------------------------------------------------
[2025-11-25 02:49:43] 2025-11-25 01:49:06,472 | INFO     | 
[2025-11-25 02:49:43] 2025-11-25 01:49:06,472 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-25 02:49:43] 2025-11-25 01:49:06,989 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,991 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:49:43] 2025-11-25 01:49:06,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,991 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:49:43] 2025-11-25 01:49:06,991 | INFO     | job 6893872274 has completed (purged errors)
[2025-11-25 02:49:43] 2025-11-25 01:49:06,992 | INFO     | overall cleanup function is called
[2025-11-25 02:49:43] 2025-11-25 01:49:08,016 | INFO     | --- collectZombieJob: --- 10, [5541]
[2025-11-25 02:49:43] 2025-11-25 01:49:08,017 | INFO     | zombie collector waiting for pid 5541
[2025-11-25 02:49:43] 2025-11-25 01:49:08,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:49:43] 2025-11-25 01:49:08,017 | INFO     | collected zombie processes
[2025-11-25 02:49:43] 2025-11-25 01:49:08,017 | INFO     | will attempt to kill all subprocesses of pid=5541
[2025-11-25 02:49:43] 2025-11-25 01:49:08,104 | INFO     | process IDs to be killed: [5541] (in reverse order)
[2025-11-25 02:49:43] 2025-11-25 01:49:09,213 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:49:43] 2025-11-25 01:49:09,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:49:43] 2025-11-25 01:49:09,215 | INFO     | did not find any defunct processes belonging to 5541
[2025-11-25 02:49:43] 2025-11-25 01:49:09,217 | INFO     | did not find any defunct processes belonging to 5541
[2025-11-25 02:49:43] 2025-11-25 01:49:09,294 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:49:43] 2025-11-25 01:49:09,294 | INFO     | ready for new job
[2025-11-25 02:49:43] 2025-11-25 01:49:09,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:49:43] 2025-11-25 01:49:09,299 | INFO     | ***************************************
[2025-11-25 02:49:43] 2025-11-25 01:49:09,299 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:49:43] 2025-11-25 01:49:09,300 | INFO     | ***************************************
[2025-11-25 02:49:43] 2025-11-25 01:49:09,300 | INFO     | 
[2025-11-25 02:49:43] 2025-11-25 01:49:09,300 | INFO     | pilot is running in a VM
[2025-11-25 02:49:43] 2025-11-25 01:49:09,300 | INFO     | architecture information:
[2025-11-25 02:49:43] 2025-11-25 01:49:09,309 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:49:43] 2025-11-25 01:49:09,517 | INFO     | cat /etc/os-release:
[2025-11-25 02:49:43] NAME="CentOS Linux"
[2025-11-25 02:49:43] VERSION="7 (Core)"
[2025-11-25 02:49:43] ID="centos"
[2025-11-25 02:49:43] ID_LIKE="rhel fedora"
[2025-11-25 02:49:43] VERSION_ID="7"
[2025-11-25 02:49:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:49:43] ANSI_COLOR="0;31"
[2025-11-25 02:49:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:49:43] HOME_URL="https://www.centos.org/"
[2025-11-25 02:49:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:49:43] 
[2025-11-25 02:49:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:49:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:49:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:49:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:49:43] 
[2025-11-25 02:49:43] 2025-11-25 01:49:09,517 | INFO     | ***************************************
[2025-11-25 02:49:43] 2025-11-25 01:49:10,021 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-25 02:49:43] 2025-11-25 01:49:10,232 | INFO     | sufficient remaining disk space (493190381568 B)
[2025-11-25 02:49:43] 2025-11-25 01:49:10,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:49:43] 2025-11-25 01:49:10,233 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:49:43] 2025-11-25 01:49:10,233 | INFO     | update_server=False
[2025-11-25 02:49:43] 2025-11-25 01:49:10,233 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:49:43] 2025-11-25 01:49:10,272 | INFO     | all data control threads have been joined
[2025-11-25 02:49:43] 2025-11-25 01:49:10,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:49:43] 2025-11-25 01:49:10,491 | INFO     | all payload control threads have been joined
[2025-11-25 02:49:43] 2025-11-25 01:49:10,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:49:43] 2025-11-25 01:49:10,560 | INFO     | aborting loop
[2025-11-25 02:49:43] 2025-11-25 01:49:11,124 | INFO     | all job control threads have been joined
[2025-11-25 02:49:43] 2025-11-25 01:49:11,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:49:43] 2025-11-25 01:49:11,239 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:11,279 | INFO     | [data] control thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:11,371 | INFO     | [job] validate thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:11,498 | INFO     | [payload] control thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:11,556 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:11,566 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:11,716 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:11,950 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:11,971 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:12,131 | INFO     | [job] control thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:12,153 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:12,192 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:12,320 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:12,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:49:43] 2025-11-25 01:49:12,439 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:12,462 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:13,368 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:49:43] 2025-11-25 01:49:16,342 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:49:43] 2025-11-25 01:49:16,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171164510016)>', '<ExcThread(monitor, started 140170703640320)>']
[2025-11-25 02:49:43] 2025-11-25 01:49:22,007 | INFO     | all workflow threads have been joined
[2025-11-25 02:49:43] 2025-11-25 01:49:22,008 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:49:43] 2025-11-25 01:49:22,008 | INFO     | traces error code: 0
[2025-11-25 02:49:43] 2025-11-25 01:49:22,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:49:43] 2025-11-25 01:49:39,061 | INFO     | PID=31294 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 02:49:43] 2025-11-25 01:49:39,061 | INFO     | .. there are 2 such processes running
[2025-11-25 02:49:43] 2025-11-25 01:49:39,061 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:49:43] 2025-11-25 01:49:39,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:49:43] 2025-11-25 01:49:39,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:49:43] 2025-11-25 01:49:39,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:49:43] 2025-11-25 01:49:39,062 | INFO     | [monitor] control thread has ended
[2025-11-25 02:49:43] 2025-11-25 01:49:39,422 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:49:43] 2025-11-25 01:49:39,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:49:43] 2025-11-25 01:49:39,595 [wrapper] pilotpid: 31294
[2025-11-25 02:49:43] 2025-11-25 01:49:39,706 [wrapper] Pilot exit status: 0
[2025-11-25 02:49:43] 2025-11-25 01:49:40,078 [wrapper] pandaids: 6893872274
[2025-11-25 02:49:43] 2025-11-25 01:49:41,111 [wrapper] cleanup supervisor_pilot 24625 31295
[2025-11-25 02:49:43] 2025-11-25 01:49:41,203 [wrapper] Test setup, not cleaning
[2025-11-25 02:49:43] 2025-11-25 01:49:41,313 [wrapper] apfmon messages muted
[2025-11-25 02:49:43] 2025-11-25 01:49:41,413 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:49:43] 2025-11-25 01:49:41,473 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:49:43]  *** Error codes and diagnostics ***
[2025-11-25 02:49:43]     "exeErrorCode": 0,
[2025-11-25 02:49:43]     "exeErrorDiag": "",
[2025-11-25 02:49:43]     "pilotErrorCode": 0,
[2025-11-25 02:49:43]     "pilotErrorDiag": "",
[2025-11-25 02:49:43]  *** Listing of results directory ***
[2025-11-25 02:49:43] total 1329612
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc    576529 Nov 20 16:07 pilot3.tar.gz
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc      5112 Nov 20 16:13 queuedata.json
[2025-11-25 02:49:43] -rwx------. 1 boinc boinc     36292 Nov 20 16:13 runpilot2-wrapper.sh
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc       100 Nov 24 06:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:49:43] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 06:09 run_atlas
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc       105 Nov 24 06:09 job.xml
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc      6392 Nov 24 06:09 init_data.xml
[2025-11-25 02:49:43] -rw-r--r--. 2 boinc boinc 409768735 Nov 24 06:09 EVNT.47493127._000677.pool.root.1
[2025-11-25 02:49:43] -rw-r--r--. 2 boinc boinc     15847 Nov 24 06:09 start_atlas.sh
[2025-11-25 02:49:43] drwxrwx--x. 2 boinc boinc        68 Nov 24 06:09 shared
[2025-11-25 02:49:43] -rw-r--r--. 2 boinc boinc    590097 Nov 24 06:09 input.tar.gz
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc         0 Nov 24 06:09 boinc_lockfile
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc      2785 Nov 24 06:09 pandaJob.out
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc    989786 Nov 24 06:13 agis_schedconf.cvmfs.json
[2025-11-25 02:49:43] drwx------. 5 boinc boinc      4096 Nov 24 06:13 pilot3
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc       533 Nov 25 02:22 boinc_task_state.xml
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc 923575767 Nov 25 02:45 HITS.47523449._006762.pool.root.1
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc      1032 Nov 25 02:47 memory_monitor_summary.json
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc   1516227 Nov 25 02:47 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc   2326850 Nov 25 02:47 log.47523449._006762.job.log.tgz.1
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc      8643 Nov 25 02:49 heartbeat.json
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc        95 Nov 25 02:49 pilot_heartbeat.json
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc      8192 Nov 25 02:49 boinc_mmap_file
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc        29 Nov 25 02:49 wrapper_checkpoint.txt
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc       820 Nov 25 02:49 pilotlog.txt
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc   9810208 Nov 25 02:49 log.47523449._006762.job.log.1
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc       353 Nov 25 02:49 output.list
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc       620 Nov 25 02:49 runtime_log
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc  12154880 Nov 25 02:49 result.tar.gz
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc      8833 Nov 25 02:49 runtime_log.err
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc       661 Nov 25 02:49 LwrKDm7WLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmICIKDmWqDgpn.diag
[2025-11-25 02:49:43] -rw-r--r--. 1 boinc boinc     21437 Nov 25 02:49 stderr.txt
[2025-11-25 02:49:43] HITS file was successfully produced:
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc 923575767 Nov 25 02:45 shared/HITS.pool.root.1
[2025-11-25 02:49:43]  *** Contents of shared directory: ***
[2025-11-25 02:49:43] total 1314568
[2025-11-25 02:49:43] -rw-r--r--. 2 boinc boinc 409768735 Nov 24 06:09 ATLAS.root_0
[2025-11-25 02:49:43] -rw-r--r--. 2 boinc boinc     15847 Nov 24 06:09 start_atlas.sh
[2025-11-25 02:49:43] -rw-r--r--. 2 boinc boinc    590097 Nov 24 06:09 input.tar.gz
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc 923575767 Nov 25 02:45 HITS.pool.root.1
[2025-11-25 02:49:43] -rw-------. 1 boinc boinc  12154880 Nov 25 02:49 result.tar.gz
02:49:44 (27489): run_atlas exited; CPU time 336834.401253
02:49:44 (27489): called boinc_finish(0)

</stderr_txt>
]]>

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