Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:01:09 (24400): wrapper (7.7.26015): starting
02:01:09 (24400): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 02:01:09] Arguments: --nthreads 8
[2025-11-24 02:01:09] Threads: 8
[2025-11-24 02:01:09] Checking for CVMFS
[2025-11-24 02:01:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:01:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:01:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:01:12] 2.11.2.0 22894 77999 112040 153227 3 118 20021234 25165825 4462 130560 2 22870996 99.841 14766705 1971 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 02:01:12] CVMFS is ok
[2025-11-24 02:01:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:01:12] Checking for apptainer binary...
[2025-11-24 02:01:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:01:12] Running /usr/bin/apptainer --version
[2025-11-24 02:01:12] apptainer version 1.3.2-1.el7
[2025-11-24 02:01:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:01:38] cg-vwn425.simple-grid.lan
[2025-11-24 02:01:38] apptainer works
[2025-11-24 02:01:38] Set ATHENA_PROC_NUMBER=8
[2025-11-24 02:01:38] Set ATHENA_CORE_NUMBER=8
[2025-11-24 02:01:38] Starting ATLAS job with PandaID=6893872401
[2025-11-24 02:01:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:37:20]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:37:20] 2025-11-24 21:36:33,391 | INFO     | monitor loop #4953: job 0:6893872401 is in state 'finished'
[2025-11-24 22:37:20] 2025-11-24 21:36:33,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:37:20] 2025-11-24 21:36:34,954 | INFO     | time since job start (73854s) is within the limit (172800.0s)
[2025-11-24 22:37:20] 2025-11-24 21:36:35,895 | INFO     | monitor loop #4954: job 0:6893872401 is in state 'finished'
[2025-11-24 22:37:20] 2025-11-24 21:36:35,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:37:20] 2025-11-24 21:36:36,961 | INFO     | time since job start (73856s) is within the limit (172800.0s)
[2025-11-24 22:37:20] 2025-11-24 21:36:37,167 [wrapper] supervise_pilot (15 min periods counter: 83)
[2025-11-24 22:37:20] 2025-11-24 21:36:38,402 | INFO     | monitor loop #4955: job 0:6893872401 is in state 'finished'
[2025-11-24 22:37:20] 2025-11-24 21:36:38,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:37:20] 2025-11-24 21:36:38,970 | INFO     | time since job start (73858s) is within the limit (172800.0s)
[2025-11-24 22:37:20] 2025-11-24 21:36:40,909 | INFO     | monitor loop #4956: job 0:6893872401 is in state 'finished'
[2025-11-24 22:37:20] 2025-11-24 21:36:40,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:37:20] 2025-11-24 21:36:40,976 | INFO     | time since job start (73860s) is within the limit (172800.0s)
[2025-11-24 22:37:20] 2025-11-24 21:36:42,989 | INFO     | time since job start (73862s) is within the limit (172800.0s)
[2025-11-24 22:37:20] 2025-11-24 21:36:43,420 | INFO     | monitor loop #4957: job 0:6893872401 is in state 'finished'
[2025-11-24 22:37:20] 2025-11-24 21:36:43,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:37:20] 2025-11-24 21:36:43,578 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 22:37:20] 2025-11-24 21:36:43,579 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 22:37:20] 2025-11-24 21:36:43,581 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6893872401/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:37:20] 2025-11-24 21:36:43,582 | INFO     | extracted standard info from prmon json
[2025-11-24 22:37:20] 2025-11-24 21:36:43,582 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:37:20] 2025-11-24 21:36:43,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:37:20] 2025-11-24 21:36:43,608 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:37:20] 2025-11-24 21:36:43,610 | INFO     | sum of square deviations: 537162537835.1654
[2025-11-24 22:37:20] 2025-11-24 21:36:43,649 | INFO     | sum of deviations: 2387133339490.7466
[2025-11-24 22:37:20] 2025-11-24 21:36:43,649 | INFO     | mean x: 1763983465.080766
[2025-11-24 22:37:20] 2025-11-24 21:36:43,649 | INFO     | mean y: 2818333.837635304
[2025-11-24 22:37:20] 2025-11-24 21:36:43,649 | INFO     | intersect: -7836268428.941903
[2025-11-24 22:37:20] 2025-11-24 21:36:43,651 | INFO     | chi2: 23.428225121348962
[2025-11-24 22:37:20] 2025-11-24 21:36:43,653 | INFO     | sum of square deviations: 530481859614.30035
[2025-11-24 22:37:20] 2025-11-24 21:36:43,693 | INFO     | sum of deviations: 2773468830973.8564
[2025-11-24 22:37:20] 2025-11-24 21:36:43,694 | INFO     | mean x: 1763983312.5852842
[2025-11-24 22:37:20] 2025-11-24 21:36:43,694 | INFO     | mean y: 2827151.0944816056
[2025-11-24 22:37:20] 2025-11-24 21:36:43,694 | INFO     | intersect: -9219642283.337078
[2025-11-24 22:37:20] 2025-11-24 21:36:43,695 | INFO     | chi2: 20.27998384505135
[2025-11-24 22:37:20] 2025-11-24 21:36:43,695 | INFO     | current chi2=20.27998384505135 (change=13.437813833489152 %)
[2025-11-24 22:37:20] 2025-11-24 21:36:43,696 | INFO     | right removable region: 1195
[2025-11-24 22:37:20] 2025-11-24 21:36:43,697 | INFO     | sum of square deviations: 530481067834.2999
[2025-11-24 22:37:20] 2025-11-24 21:36:43,737 | INFO     | sum of deviations: 1895624841909.0376
[2025-11-24 22:37:20] 2025-11-24 21:36:43,737 | INFO     | mean x: 1763983617.5852842
[2025-11-24 22:37:20] 2025-11-24 21:36:43,738 | INFO     | mean y: 2829551.3428093647
[2025-11-24 22:37:20] 2025-11-24 21:36:43,738 | INFO     | intersect: -6300602124.110905
[2025-11-24 22:37:20] 2025-11-24 21:36:43,739 | INFO     | chi2: 18.885872655297167
[2025-11-24 22:37:20] 2025-11-24 21:36:43,739 | INFO     | current chi2=18.885872655297167 (change=19.388376381583335 %)
[2025-11-24 22:37:20] 2025-11-24 21:36:43,739 | INFO     | left removable region: 10
[2025-11-24 22:37:20] 2025-11-24 21:36:43,741 | INFO     | sum of square deviations: 515978270424.2246
[2025-11-24 22:37:20] 2025-11-24 21:36:43,778 | INFO     | sum of deviations: 1959361168648.658
[2025-11-24 22:37:20] 2025-11-24 21:36:43,778 | INFO     | mean x: 1763983587.0953586
[2025-11-24 22:37:20] 2025-11-24 21:36:43,778 | INFO     | mean y: 2849910.755274262
[2025-11-24 22:37:20] 2025-11-24 21:36:43,778 | INFO     | intersect: -6695651054.889161
[2025-11-24 22:37:20] 2025-11-24 21:36:43,780 | INFO     | chi2: 11.918668010081456
[2025-11-24 22:37:20] 2025-11-24 21:36:43,780 | INFO     | current memory leak: 3.80 B/s (using 1185 data points, chi2=11.92)
[2025-11-24 22:37:20] 2025-11-24 21:36:43,782 | INFO     | could have reported an average CPU frequency of 1999 MHz (41 samples)
[2025-11-24 22:37:20] 2025-11-24 21:36:43,783 | INFO     | ..............................
[2025-11-24 22:37:20] 2025-11-24 21:36:43,783 | INFO     | . Timing measurements:
[2025-11-24 22:37:20] 2025-11-24 21:36:43,783 | INFO     | . get job = 0 s
[2025-11-24 22:37:20] 2025-11-24 21:36:43,783 | INFO     | . initial setup = 6 s
[2025-11-24 22:37:20] 2025-11-24 21:36:43,783 | INFO     | . payload setup = 154 s
[2025-11-24 22:37:20] 2025-11-24 21:36:43,783 | INFO     | . stage-in = 0 s
[2025-11-24 22:37:20] 2025-11-24 21:36:43,783 | INFO     | . payload execution = 73403 s
[2025-11-24 22:37:20] 2025-11-24 21:36:43,783 | INFO     | . stage-out = 6 s
[2025-11-24 22:37:20] 2025-11-24 21:36:43,783 | INFO     | . log creation = 2 s
[2025-11-24 22:37:20] 2025-11-24 21:36:43,783 | INFO     | ..............................
[2025-11-24 22:37:20] 2025-11-24 21:36:43,905 | INFO     | 
[2025-11-24 22:37:20] 2025-11-24 21:36:43,906 | INFO     | job summary report
[2025-11-24 22:37:20] 2025-11-24 21:36:43,906 | INFO     | --------------------------------------------------
[2025-11-24 22:37:20] 2025-11-24 21:36:43,906 | INFO     | PanDA job id: 6893872401
[2025-11-24 22:37:20] 2025-11-24 21:36:43,906 | INFO     | task id: 47523449
[2025-11-24 22:37:20] 2025-11-24 21:36:43,906 | INFO     | errors: (none)
[2025-11-24 22:37:20] 2025-11-24 21:36:43,906 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:37:20] 2025-11-24 21:36:43,906 | INFO     | pilot state: finished 
[2025-11-24 22:37:20] 2025-11-24 21:36:43,906 | INFO     | transexitcode: 0
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | exeerrorcode: 0
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | exeerrordiag: 
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | exitcode: 0
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | exitmsg: OK
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | cpuconsumptiontime: 344271 s
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | nevents: 1000
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | neventsw: 0
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | pid: 2412
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | pgrp: 2412
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | corecount: 8
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | event service: False
[2025-11-24 22:37:20] 2025-11-24 21:36:43,907 | INFO     | sizes: {0: 2297977, 1: 2298834, 2: 2298834, 13: 2298862, 23: 2298918, 34: 2298946, 45: 2299102, 56: 2299130, 66: 2299158, 77: 2299186, 88: 2299242, 97: 2299812, 99
[2025-11-24 22:37:20] 2025-11-24 21:36:43,908 | INFO     | --------------------------------------------------
[2025-11-24 22:37:20] 2025-11-24 21:36:43,908 | INFO     | 
[2025-11-24 22:37:20] 2025-11-24 21:36:43,908 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-11-24 22:37:20] 2025-11-24 21:36:44,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,466 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:37:20] 2025-11-24 21:36:44,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:37:20] 2025-11-24 21:36:44,466 | INFO     | job 6893872401 has completed (purged errors)
[2025-11-24 22:37:20] 2025-11-24 21:36:44,467 | INFO     | overall cleanup function is called
[2025-11-24 22:37:20] 2025-11-24 21:36:45,484 | INFO     | --- collectZombieJob: --- 10, [2412]
[2025-11-24 22:37:20] 2025-11-24 21:36:45,484 | INFO     | zombie collector waiting for pid 2412
[2025-11-24 22:37:20] 2025-11-24 21:36:45,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:37:20] 2025-11-24 21:36:45,484 | INFO     | collected zombie processes
[2025-11-24 22:37:20] 2025-11-24 21:36:45,484 | INFO     | will attempt to kill all subprocesses of pid=2412
[2025-11-24 22:37:20] 2025-11-24 21:36:45,623 | INFO     | process IDs to be killed: [2412] (in reverse order)
[2025-11-24 22:37:20] 2025-11-24 21:36:46,384 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:37:20] 2025-11-24 21:36:46,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:37:20] 2025-11-24 21:36:46,388 | INFO     | did not find any defunct processes belonging to 2412
[2025-11-24 22:37:20] 2025-11-24 21:36:46,391 | INFO     | did not find any defunct processes belonging to 2412
[2025-11-24 22:37:20] 2025-11-24 21:36:46,393 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:37:20] 2025-11-24 21:36:46,394 | INFO     | ready for new job
[2025-11-24 22:37:20] 2025-11-24 21:36:46,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:37:20] 2025-11-24 21:36:46,400 | INFO     | ***************************************
[2025-11-24 22:37:20] 2025-11-24 21:36:46,400 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:37:20] 2025-11-24 21:36:46,400 | INFO     | ***************************************
[2025-11-24 22:37:20] 2025-11-24 21:36:46,400 | INFO     | 
[2025-11-24 22:37:20] 2025-11-24 21:36:46,401 | INFO     | pilot is running in a VM
[2025-11-24 22:37:20] 2025-11-24 21:36:46,401 | INFO     | architecture information:
[2025-11-24 22:37:20] 2025-11-24 21:36:46,401 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:37:20] 2025-11-24 21:36:46,421 | INFO     | cat /etc/os-release:
[2025-11-24 22:37:20] NAME="CentOS Linux"
[2025-11-24 22:37:20] VERSION="7 (Core)"
[2025-11-24 22:37:20] ID="centos"
[2025-11-24 22:37:20] ID_LIKE="rhel fedora"
[2025-11-24 22:37:20] VERSION_ID="7"
[2025-11-24 22:37:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:37:20] ANSI_COLOR="0;31"
[2025-11-24 22:37:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:37:20] HOME_URL="https://www.centos.org/"
[2025-11-24 22:37:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:37:20] 
[2025-11-24 22:37:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:37:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:37:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:37:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:37:20] 
[2025-11-24 22:37:20] 2025-11-24 21:36:46,421 | INFO     | ***************************************
[2025-11-24 22:37:20] 2025-11-24 21:36:46,925 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-11-24 22:37:20] 2025-11-24 21:36:47,027 | INFO     | sufficient remaining disk space (494818820096 B)
[2025-11-24 22:37:20] 2025-11-24 21:36:47,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:37:20] 2025-11-24 21:36:47,028 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:37:20] 2025-11-24 21:36:47,028 | INFO     | update_server=False
[2025-11-24 22:37:20] 2025-11-24 21:36:47,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:37:20] 2025-11-24 21:36:47,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:37:20] 2025-11-24 21:36:47,033 | INFO     | aborting loop
[2025-11-24 22:37:20] 2025-11-24 21:36:47,101 | INFO     | all job control threads have been joined
[2025-11-24 22:37:20] 2025-11-24 21:36:47,121 | INFO     | all data control threads have been joined
[2025-11-24 22:37:20] 2025-11-24 21:36:47,156 | INFO     | all payload control threads have been joined
[2025-11-24 22:37:20] 2025-11-24 21:36:47,290 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:37:20] 2025-11-24 21:36:48,034 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,039 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,048 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,054 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,062 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,107 | INFO     | [job] control thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,127 | INFO     | [data] control thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,162 | INFO     | [payload] control thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:37:20] 2025-11-24 21:36:48,298 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,800 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,920 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,920 | INFO     | [job] validate thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:48,924 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:37:20] 2025-11-24 21:36:48,944 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:49,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:37:20] 2025-11-24 21:36:49,930 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:50,256 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:53,053 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:37:20] 2025-11-24 21:36:54,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140210618193728)>', '<ExcThread(monitor, started 140210180437760)>']
[2025-11-24 22:37:20] 2025-11-24 21:36:59,082 | INFO     | all workflow threads have been joined
[2025-11-24 22:37:20] 2025-11-24 21:36:59,082 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:37:20] 2025-11-24 21:36:59,083 | INFO     | traces error code: 0
[2025-11-24 22:37:20] 2025-11-24 21:36:59,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:37:20] 2025-11-24 21:37:16,163 | INFO     | PID=28225 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 22:37:20] 2025-11-24 21:37:16,163 | INFO     | .. there are 9 such processes running
[2025-11-24 22:37:20] 2025-11-24 21:37:16,165 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:37:20] 2025-11-24 21:37:16,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:37:20] 2025-11-24 21:37:16,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:37:20] 2025-11-24 21:37:16,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:37:20] 2025-11-24 21:37:16,165 | INFO     | [monitor] control thread has ended
[2025-11-24 22:37:20] 2025-11-24 21:37:16,503 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:37:20] 2025-11-24 21:37:16,573 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:37:20] 2025-11-24 21:37:16,639 [wrapper] pilotpid: 28225
[2025-11-24 22:37:20] 2025-11-24 21:37:16,710 [wrapper] Pilot exit status: 0
[2025-11-24 22:37:20] 2025-11-24 21:37:17,121 [wrapper] pandaids: 6893872401
[2025-11-24 22:37:20] 2025-11-24 21:37:18,101 [wrapper] cleanup supervisor_pilot 29526 28226
[2025-11-24 22:37:20] 2025-11-24 21:37:18,162 [wrapper] Test setup, not cleaning
[2025-11-24 22:37:20] 2025-11-24 21:37:18,250 [wrapper] apfmon messages muted
[2025-11-24 22:37:20] 2025-11-24 21:37:18,336 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:37:20] 2025-11-24 21:37:18,441 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:37:20]  *** Error codes and diagnostics ***
[2025-11-24 22:37:20]     "exeErrorCode": 0,
[2025-11-24 22:37:20]     "exeErrorDiag": "",
[2025-11-24 22:37:20]     "pilotErrorCode": 0,
[2025-11-24 22:37:20]     "pilotErrorDiag": "",
[2025-11-24 22:37:20]  *** Listing of results directory ***
[2025-11-24 22:37:20] total 1328804
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc    576529 Nov 20 16:07 pilot3.tar.gz
[2025-11-24 22:37:20] -rwx------. 1 boinc boinc     36292 Nov 20 16:13 runpilot2-wrapper.sh
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc      5112 Nov 20 16:13 queuedata.json
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc       100 Nov 24 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:37:20] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 02:01 run_atlas
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc       105 Nov 24 02:01 job.xml
[2025-11-24 22:37:20] -rw-r--r--. 2 boinc boinc 412154675 Nov 24 02:01 EVNT.47493127._000679.pool.root.1
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc      6393 Nov 24 02:01 init_data.xml
[2025-11-24 22:37:20] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:01 start_atlas.sh
[2025-11-24 22:37:20] drwxrwx--x. 2 boinc boinc        68 Nov 24 02:01 shared
[2025-11-24 22:37:20] -rw-r--r--. 2 boinc boinc    590101 Nov 24 02:01 input.tar.gz
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc         0 Nov 24 02:01 boinc_lockfile
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc      2784 Nov 24 02:01 pandaJob.out
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc    989786 Nov 24 02:05 agis_schedconf.cvmfs.json
[2025-11-24 22:37:20] drwx------. 5 boinc boinc      4096 Nov 24 02:05 pilot3
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc       533 Nov 24 22:07 boinc_task_state.xml
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc 920286080 Nov 24 22:33 HITS.47523449._006785.pool.root.1
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc      1035 Nov 24 22:34 memory_monitor_summary.json
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc   1516227 Nov 24 22:35 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc   2341329 Nov 24 22:35 log.47523449._006785.job.log.tgz.1
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc      8631 Nov 24 22:36 heartbeat.json
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc        29 Nov 24 22:37 wrapper_checkpoint.txt
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc      8192 Nov 24 22:37 boinc_mmap_file
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc        95 Nov 24 22:37 pilot_heartbeat.json
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc       820 Nov 24 22:37 pilotlog.txt
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc   9836113 Nov 24 22:37 log.47523449._006785.job.log.1
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc       353 Nov 24 22:37 output.list
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc       620 Nov 24 22:37 runtime_log
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc  12195840 Nov 24 22:37 result.tar.gz
[2025-11-24 22:37:20] -rw-------. 1 boinc boinc       661 Nov 24 22:37 STBNDmTWLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGCIKDmgWQSpm.diag
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc      8833 Nov 24 22:37 runtime_log.err
[2025-11-24 22:37:20] -rw-r--r--. 1 boinc boinc     21419 Nov 24 22:37 stderr.txt
[2025-11-24 22:37:21] HITS file was successfully produced:
[2025-11-24 22:37:21] -rw-------. 1 boinc boinc 920286080 Nov 24 22:33 shared/HITS.pool.root.1
[2025-11-24 22:37:21]  *** Contents of shared directory: ***
[2025-11-24 22:37:21] total 1313724
[2025-11-24 22:37:21] -rw-r--r--. 2 boinc boinc 412154675 Nov 24 02:01 ATLAS.root_0
[2025-11-24 22:37:21] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:01 start_atlas.sh
[2025-11-24 22:37:21] -rw-r--r--. 2 boinc boinc    590101 Nov 24 02:01 input.tar.gz
[2025-11-24 22:37:21] -rw-------. 1 boinc boinc 920286080 Nov 24 22:33 HITS.pool.root.1
[2025-11-24 22:37:21] -rw-------. 1 boinc boinc  12195840 Nov 24 22:37 result.tar.gz
22:37:22 (24400): run_atlas exited; CPU time 344553.150905
22:37:22 (24400): called boinc_finish(0)

</stderr_txt>
]]>

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