Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:02:19 (2950991): wrapper (7.7.26015): starting
20:02:19 (2950991): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 20:02:19] Arguments: --nthreads 4
[2025-11-25 20:02:19] Threads: 4
[2025-11-25 20:02:19] Checking for CVMFS
[2025-11-25 20:02:19] No cvmfs_config command found, will try listing directly
[2025-11-25 20:02:19] CVMFS is ok
[2025-11-25 20:02:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:02:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:02:19] Further information can be found at the LHC@home message board.
[2025-11-25 20:02:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:02:19] Checking for apptainer binary...
[2025-11-25 20:02:19] which: no apptainer in ((null))
[2025-11-25 20:02:19] apptainer is not installed, using version from CVMFS
[2025-11-25 20:02:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:02:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-11-25 20:02:20] apptainer works
[2025-11-25 20:02:20] Set ATHENA_PROC_NUMBER=4
[2025-11-25 20:02:20] Set ATHENA_CORE_NUMBER=4
[2025-11-25 20:02:20] Starting ATLAS job with PandaID=6893872244
[2025-11-25 20:02:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:23:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:23:12] 2025-11-26 10:07:21,798 | INFO     | monitor loop #3664: job 0:6893872244 is in state 'finished'
[2025-11-26 11:23:12] 2025-11-26 10:07:21,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:23:12] 2025-11-26 10:07:21,842 | INFO     | time since job start (54287s) is within the limit (172800.0s)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,290 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 11:23:12] 2025-11-26 10:07:22,314 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2667.2443281249994
[2025-11-26 11:23:12] 2025-11-26 10:07:22,339 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6893872244/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,340 | INFO     | extracted standard info from prmon json
[2025-11-26 11:23:12] 2025-11-26 10:07:22,340 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:23:12] 2025-11-26 10:07:22,340 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:23:12] 2025-11-26 10:07:22,356 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:23:12] 2025-11-26 10:07:22,358 | INFO     | sum of square deviations: 218599013762.49
[2025-11-26 11:23:12] 2025-11-26 10:07:22,378 | INFO     | sum of deviations: 546559746644.4094
[2025-11-26 11:23:12] 2025-11-26 10:07:22,378 | INFO     | mean x: 1764124504.5033708
[2025-11-26 11:23:12] 2025-11-26 10:07:22,379 | INFO     | mean y: 2270956.5303370785
[2025-11-26 11:23:12] 2025-11-26 10:07:22,379 | INFO     | intersect: -4408542366.159987
[2025-11-26 11:23:12] 2025-11-26 10:07:22,380 | INFO     | chi2: 5.4417552654008565
[2025-11-26 11:23:12] 2025-11-26 10:07:22,381 | INFO     | sum of square deviations: 214935420404.99014
[2025-11-26 11:23:12] 2025-11-26 10:07:22,400 | INFO     | sum of deviations: 794481589287.5896
[2025-11-26 11:23:12] 2025-11-26 10:07:22,400 | INFO     | mean x: 1764124352.0033898
[2025-11-26 11:23:12] 2025-11-26 10:07:22,400 | INFO     | mean y: 2281278.8033898305
[2025-11-26 11:23:12] 2025-11-26 10:07:22,400 | INFO     | intersect: -6518581202.772272
[2025-11-26 11:23:12] 2025-11-26 10:07:22,401 | INFO     | chi2: 1.9930842839240273
[2025-11-26 11:23:12] 2025-11-26 10:07:22,402 | INFO     | current chi2=1.9930842839240273 (change=63.37423888582004 %)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,403 | INFO     | sum of square deviations: 211312990609.98962
[2025-11-26 11:23:12] 2025-11-26 10:07:22,420 | INFO     | sum of deviations: 817933334039.176
[2025-11-26 11:23:12] 2025-11-26 10:07:22,420 | INFO     | mean x: 1764124199.5034091
[2025-11-26 11:23:12] 2025-11-26 10:07:22,420 | INFO     | mean y: 2282265.1079545454
[2025-11-26 11:23:12] 2025-11-26 10:07:22,421 | INFO     | intersect: -6826147846.991374
[2025-11-26 11:23:12] 2025-11-26 10:07:22,421 | INFO     | chi2: 1.9239319919425373
[2025-11-26 11:23:12] 2025-11-26 10:07:22,422 | INFO     | current chi2=1.9239319919425373 (change=3.469612024903505 %)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,422 | INFO     | right removable region: 879
[2025-11-26 11:23:12] 2025-11-26 10:07:22,423 | INFO     | sum of square deviations: 214935418574.99014
[2025-11-26 11:23:12] 2025-11-26 10:07:22,441 | INFO     | sum of deviations: 389421051966.90234
[2025-11-26 11:23:12] 2025-11-26 10:07:22,441 | INFO     | mean x: 1764124657.0033898
[2025-11-26 11:23:12] 2025-11-26 10:07:22,441 | INFO     | mean y: 2277484.3661016948
[2025-11-26 11:23:12] 2025-11-26 10:07:22,442 | INFO     | intersect: -3193972274.2157936
[2025-11-26 11:23:12] 2025-11-26 10:07:22,442 | INFO     | chi2: 3.662897906479063
[2025-11-26 11:23:12] 2025-11-26 10:07:22,443 | INFO     | current chi2=3.662897906479063 (change=32.689036389268 %)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,444 | INFO     | sum of square deviations: 211312986949.98956
[2025-11-26 11:23:12] 2025-11-26 10:07:22,461 | INFO     | sum of deviations: 360369361021.41675
[2025-11-26 11:23:12] 2025-11-26 10:07:22,462 | INFO     | mean x: 1764124809.5034091
[2025-11-26 11:23:12] 2025-11-26 10:07:22,462 | INFO     | mean y: 2278706.694318182
[2025-11-26 11:23:12] 2025-11-26 10:07:22,462 | INFO     | intersect: -3006227961.7255874
[2025-11-26 11:23:12] 2025-11-26 10:07:22,463 | INFO     | chi2: 3.6379858477610743
[2025-11-26 11:23:12] 2025-11-26 10:07:22,463 | INFO     | current chi2=3.6379858477610743 (change=0.6801188390733853 %)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,463 | INFO     | left removable region: 20
[2025-11-26 11:23:12] 2025-11-26 10:07:22,464 | INFO     | sum of square deviations: 196543035782.99042
[2025-11-26 11:23:12] 2025-11-26 10:07:22,481 | INFO     | sum of deviations: 580130094541.4003
[2025-11-26 11:23:12] 2025-11-26 10:07:22,481 | INFO     | mean x: 1764124779.0034924
[2025-11-26 11:23:12] 2025-11-26 10:07:22,481 | INFO     | mean y: 2292345.533178114
[2025-11-26 11:23:12] 2025-11-26 10:07:22,482 | INFO     | intersect: -5204821052.044115
[2025-11-26 11:23:12] 2025-11-26 10:07:22,482 | INFO     | chi2: 0.0772011249857792
[2025-11-26 11:23:12] 2025-11-26 10:07:22,483 | INFO     | current memory leak: 2.95 B/s (using 859 data points, chi2=0.08)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,484 | INFO     | could have reported an average CPU frequency of 2685 MHz (33 samples)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,484 | INFO     | ..............................
[2025-11-26 11:23:12] 2025-11-26 10:07:22,484 | INFO     | . Timing measurements:
[2025-11-26 11:23:12] 2025-11-26 10:07:22,485 | INFO     | . get job = 0 s
[2025-11-26 11:23:12] 2025-11-26 10:07:22,485 | INFO     | . initial setup = 1 s
[2025-11-26 11:23:12] 2025-11-26 10:07:22,485 | INFO     | . payload setup = 9 s
[2025-11-26 11:23:12] 2025-11-26 10:07:22,485 | INFO     | . stage-in = 0 s
[2025-11-26 11:23:12] 2025-11-26 10:07:22,485 | INFO     | . payload execution = 54242 s
[2025-11-26 11:23:12] 2025-11-26 10:07:22,485 | INFO     | . stage-out = 2 s
[2025-11-26 11:23:12] 2025-11-26 10:07:22,485 | INFO     | . log creation = 0 s
[2025-11-26 11:23:12] 2025-11-26 10:07:22,485 | INFO     | ..............................
[2025-11-26 11:23:12] 2025-11-26 10:07:22,583 | INFO     | 
[2025-11-26 11:23:12] 2025-11-26 10:07:22,583 | INFO     | job summary report
[2025-11-26 11:23:12] 2025-11-26 10:07:22,583 | INFO     | --------------------------------------------------
[2025-11-26 11:23:12] 2025-11-26 10:07:22,583 | INFO     | PanDA job id: 6893872244
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | task id: 47523449
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | errors: (none)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | pilot state: finished 
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | transexitcode: 0
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | exeerrorcode: 0
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | exeerrordiag: 
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | exitcode: 0
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | exitmsg: OK
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | cpuconsumptiontime: 214740 s
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | nevents: 1000
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | neventsw: 0
[2025-11-26 11:23:12] 2025-11-26 10:07:22,584 | INFO     | pid: 2963764
[2025-11-26 11:23:12] 2025-11-26 10:07:22,585 | INFO     | pgrp: 2963764
[2025-11-26 11:23:12] 2025-11-26 10:07:22,585 | INFO     | corecount: 4
[2025-11-26 11:23:12] 2025-11-26 10:07:22,585 | INFO     | event service: False
[2025-11-26 11:23:12] 2025-11-26 10:07:22,585 | INFO     | sizes: {0: 2284155, 1: 2284354, 7: 2284616, 11: 2284644, 54256: 2336900, 54259: 2345918, 54262: 2346102, 54270: 2346412}
[2025-11-26 11:23:12] 2025-11-26 10:07:22,585 | INFO     | --------------------------------------------------
[2025-11-26 11:23:12] 2025-11-26 10:07:22,585 | INFO     | 
[2025-11-26 11:23:12] 2025-11-26 10:07:22,585 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-11-26 11:23:12] 2025-11-26 10:07:22,619 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,619 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,619 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,621 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:23:12] 2025-11-26 10:07:22,621 | INFO     | job 6893872244 has completed (purged errors)
[2025-11-26 11:23:12] 2025-11-26 10:07:22,621 | INFO     | overall cleanup function is called
[2025-11-26 11:23:12] 2025-11-26 10:07:23,639 | INFO     | --- collectZombieJob: --- 10, [2963764]
[2025-11-26 11:23:12] 2025-11-26 10:07:23,640 | INFO     | zombie collector waiting for pid 2963764
[2025-11-26 11:23:12] 2025-11-26 10:07:23,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:23:12] 2025-11-26 10:07:23,640 | INFO     | collected zombie processes
[2025-11-26 11:23:12] 2025-11-26 10:07:23,640 | INFO     | will attempt to kill all subprocesses of pid=2963764
[2025-11-26 11:23:12] 2025-11-26 10:07:24,460 | INFO     | process IDs to be killed: [2963764] (in reverse order)
[2025-11-26 11:23:12] 2025-11-26 10:07:24,739 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:23:12] 2025-11-26 10:07:24,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:23:12] 2025-11-26 10:07:24,777 | INFO     | did not find any defunct processes belonging to 2963764
[2025-11-26 11:23:12] 2025-11-26 10:07:24,811 | INFO     | did not find any defunct processes belonging to 2963764
[2025-11-26 11:23:12] 2025-11-26 10:07:24,813 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:23:12] 2025-11-26 10:07:24,813 | INFO     | ready for new job
[2025-11-26 11:23:12] 2025-11-26 10:07:24,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:23:12] 2025-11-26 10:07:24,819 | INFO     | ***************************************
[2025-11-26 11:23:12] 2025-11-26 10:07:24,819 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:23:12] 2025-11-26 10:07:24,819 | INFO     | ***************************************
[2025-11-26 11:23:12] 2025-11-26 10:07:24,819 | INFO     | 
[2025-11-26 11:23:12] 2025-11-26 10:07:24,827 | INFO     | architecture information:
[2025-11-26 11:23:12] 2025-11-26 10:07:24,828 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:23:12] 2025-11-26 10:07:24,855 | INFO     | cat /etc/os-release:
[2025-11-26 11:23:12] NAME="CentOS Linux"
[2025-11-26 11:23:12] VERSION="7 (Core)"
[2025-11-26 11:23:12] ID="centos"
[2025-11-26 11:23:12] ID_LIKE="rhel fedora"
[2025-11-26 11:23:12] VERSION_ID="7"
[2025-11-26 11:23:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:23:12] ANSI_COLOR="0;31"
[2025-11-26 11:23:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:23:12] HOME_URL="https://www.centos.org/"
[2025-11-26 11:23:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:23:12] 
[2025-11-26 11:23:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:23:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:23:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:23:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:23:12] 
[2025-11-26 11:23:12] 2025-11-26 10:07:24,855 | INFO     | ***************************************
[2025-11-26 11:23:12] 2025-11-26 10:07:25,357 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-11-26 11:23:12] 2025-11-26 10:07:25,382 | INFO     | sufficient remaining disk space (3290886569984 B)
[2025-11-26 11:23:12] 2025-11-26 10:07:25,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:23:12] 2025-11-26 10:07:25,383 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:23:12] 2025-11-26 10:07:25,383 | INFO     | update_server=False
[2025-11-26 11:23:12] 2025-11-26 10:07:25,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:23:12] 2025-11-26 10:07:25,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:23:12] 2025-11-26 10:07:25,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:23:12] 2025-11-26 10:07:25,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:23:12] 2025-11-26 10:07:25,384 | INFO     | aborting loop
[2025-11-26 11:23:12] 2025-11-26 10:07:25,684 | INFO     | all data control threads have been joined
[2025-11-26 11:23:12] 2025-11-26 10:07:26,084 | INFO     | all payload control threads have been joined
[2025-11-26 11:23:12] 2025-11-26 10:07:26,290 | INFO     | all job control threads have been joined
[2025-11-26 11:23:12] 2025-11-26 10:07:26,388 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:26,390 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:26,404 | INFO     | [job] validate thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:26,512 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:26,690 | INFO     | [data] control thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:26,982 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:26,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:27,090 | INFO     | [payload] control thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:27,296 | INFO     | [job] control thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:27,370 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:27,390 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:27,485 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:27,558 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:27,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:23:12] 2025-11-26 10:07:27,766 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:28,598 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:29,388 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:23:12] 2025-11-26 10:07:55,867 | INFO     | PID=2955861 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 11:23:12] 2025-11-26 10:07:55,867 | INFO     | .. there are 8 such processes running
[2025-11-26 11:23:12] 2025-11-26 10:07:55,868 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:23:12] 2025-11-26 10:07:55,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:23:12] 2025-11-26 10:07:55,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:23:12] 2025-11-26 10:08:01,255 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:23:12] 2025-11-26 10:08:02,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23230169126720)>', '<ExcThread(monitor, started 23229729068800)>']
[2025-11-26 11:23:12] 2025-11-26 10:08:02,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:23:12] 2025-11-26 10:08:02,904 | INFO     | [monitor] control thread has ended
[2025-11-26 11:23:12] 2025-11-26 10:08:07,914 | INFO     | all workflow threads have been joined
[2025-11-26 11:23:12] 2025-11-26 10:08:07,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:23:12] 2025-11-26 10:08:07,915 | INFO     | traces error code: 0
[2025-11-26 11:23:12] 2025-11-26 10:08:07,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:23:12] 2025-11-26 10:08:08,143 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:23:12] 2025-11-26 10:08:08,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:23:12] 2025-11-26 10:08:08,151 [wrapper] pilotpid: 2955861
[2025-11-26 11:23:12] 2025-11-26 10:08:08,155 [wrapper] Pilot exit status: 0
[2025-11-26 11:23:12] 2025-11-26 10:08:08,171 [wrapper] pandaids: 6893872244
[2025-11-26 11:23:12] 2025-11-26 10:08:08,367 [wrapper] cleanup supervisor_pilot 4120212 2955862
[2025-11-26 11:23:12] 2025-11-26 10:08:08,371 [wrapper] Test setup, not cleaning
[2025-11-26 11:23:12] 2025-11-26 10:08:08,375 [wrapper] apfmon messages muted
[2025-11-26 11:23:12] 2025-11-26 10:08:08,378 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:23:12] 2025-11-26 10:08:08,382 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:23:12]  *** Error codes and diagnostics ***
[2025-11-26 11:23:12]     "exeErrorCode": 0,
[2025-11-26 11:23:12]     "exeErrorDiag": "",
[2025-11-26 11:23:12]     "pilotErrorCode": 0,
[2025-11-26 11:23:12]     "pilotErrorDiag": "",
[2025-11-26 11:23:12]  *** Listing of results directory ***
[2025-11-26 11:23:12] total 1320704
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc    576529 Nov 20 16:07 pilot3.tar.gz
[2025-11-26 11:23:12] -rwx------ 1 boinc boinc     36292 Nov 20 16:12 runpilot2-wrapper.sh
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc      5112 Nov 20 16:12 queuedata.json
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc       100 Nov 25 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:23:12] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 20:02 run_atlas
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc       105 Nov 25 20:02 job.xml
[2025-11-26 11:23:12] -rw-r--r-- 2 boinc boinc 410731956 Nov 25 20:02 EVNT.47493127._000674.pool.root.1
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc      6687 Nov 25 20:02 init_data.xml
[2025-11-26 11:23:12] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:02 start_atlas.sh
[2025-11-26 11:23:12] drwxrwx--x 2 boinc boinc      4096 Nov 25 20:02 shared
[2025-11-26 11:23:12] -rw-r--r-- 2 boinc boinc    590093 Nov 25 20:02 input.tar.gz
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc         0 Nov 25 20:02 boinc_lockfile
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc      2785 Nov 25 20:02 pandaJob.out
[2025-11-26 11:23:12] -rw------- 1 boinc boinc    991543 Nov 25 20:02 agis_schedconf.cvmfs.json
[2025-11-26 11:23:12] drwx------ 5 boinc boinc      4096 Nov 25 20:02 pilot3
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc       531 Nov 26 10:58 boinc_task_state.xml
[2025-11-26 11:23:12] -rw------- 1 boinc boinc 919439446 Nov 26 11:06 HITS.47523449._006732.pool.root.1
[2025-11-26 11:23:12] -rw------- 1 boinc boinc      1039 Nov 26 11:07 memory_monitor_summary.json
[2025-11-26 11:23:12] -rw------- 1 boinc boinc   1516240 Nov 26 11:07 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:23:12] -rw------- 1 boinc boinc   1651652 Nov 26 11:07 log.47523449._006732.job.log.tgz.1
[2025-11-26 11:23:12] -rw------- 1 boinc boinc      8592 Nov 26 11:07 heartbeat.json
[2025-11-26 11:23:12] -rw------- 1 boinc boinc        95 Nov 26 11:07 pilot_heartbeat.json
[2025-11-26 11:23:12] -rw------- 1 boinc boinc      4836 Nov 26 11:08 pilotlog.txt
[2025-11-26 11:23:12] -rw------- 1 boinc boinc   7501759 Nov 26 11:08 log.47523449._006732.job.log.1
[2025-11-26 11:23:12] -rw------- 1 boinc boinc       353 Nov 26 11:08 output.list
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc       620 Nov 26 11:08 runtime_log
[2025-11-26 11:23:12] -rw------- 1 boinc boinc   9175040 Nov 26 11:08 result.tar.gz
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc      9223 Nov 26 11:08 runtime_log.err
[2025-11-26 11:23:12] -rw------- 1 boinc boinc       670 Nov 26 11:08 HX8LDm7VLg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlqGKDmcesSYm.diag
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc        28 Nov 26 11:22 wrapper_checkpoint.txt
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc      8192 Nov 26 11:23 boinc_mmap_file
[2025-11-26 11:23:12] -rw-r--r-- 1 boinc boinc     21130 Nov 26 11:23 stderr.txt
[2025-11-26 11:23:13] HITS file was successfully produced:
[2025-11-26 11:23:13] -rw------- 1 boinc boinc 919439446 Nov 26 11:06 shared/HITS.pool.root.1
[2025-11-26 11:23:13]  *** Contents of shared directory: ***
[2025-11-26 11:23:13] total 1308564
[2025-11-26 11:23:13] -rw-r--r-- 2 boinc boinc 410731956 Nov 25 20:02 ATLAS.root_0
[2025-11-26 11:23:13] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:02 start_atlas.sh
[2025-11-26 11:23:13] -rw-r--r-- 2 boinc boinc    590093 Nov 25 20:02 input.tar.gz
[2025-11-26 11:23:13] -rw------- 1 boinc boinc 919439446 Nov 26 11:06 HITS.pool.root.1
[2025-11-26 11:23:13] -rw------- 1 boinc boinc   9175040 Nov 26 11:08 result.tar.gz
11:23:14 (2950991): run_atlas exited; CPU time 217587.260971
11:23:14 (2950991): called boinc_finish(0)

</stderr_txt>
]]>

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