Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:27:07 (1274303): wrapper (7.7.26015): starting
04:27:07 (1274303): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 04:27:07] Arguments: --nthreads 4
[2025-11-23 04:27:07] Threads: 4
[2025-11-23 04:27:07] Checking for CVMFS
[2025-11-23 04:27:07] No cvmfs_config command found, will try listing directly
[2025-11-23 04:27:07] CVMFS is ok
[2025-11-23 04:27:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 04:27:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 04:27:07] Further information can be found at the LHC@home message board.
[2025-11-23 04:27:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 04:27:07] Checking for apptainer binary...
[2025-11-23 04:27:07] which: no apptainer in ((null))
[2025-11-23 04:27:07] apptainer is not installed, using version from CVMFS
[2025-11-23 04:27:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 04:27:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-11-23 04:27:08] apptainer works
[2025-11-23 04:27:08] Set ATHENA_PROC_NUMBER=4
[2025-11-23 04:27:08] Set ATHENA_CORE_NUMBER=4
[2025-11-23 04:27:08] Starting ATLAS job with PandaID=6893872241
[2025-11-23 04:27:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 20:25:27]  *** The last 200 lines of the pilot log: ***
[2025-11-23 20:25:27] 2025-11-23 19:20:16,937 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 20:25:27] 2025-11-23 19:20:16,993 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2705.0503828125015
[2025-11-23 20:25:27] 2025-11-23 19:20:17,022 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6893872241/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 20:25:27] 2025-11-23 19:20:17,023 | INFO     | extracted standard info from prmon json
[2025-11-23 20:25:27] 2025-11-23 19:20:17,023 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 20:25:27] 2025-11-23 19:20:17,023 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 20:25:27] 2025-11-23 19:20:17,038 | INFO     | fitting pss+swap vs Time
[2025-11-23 20:25:27] 2025-11-23 19:20:17,039 | INFO     | sum of square deviations: 255092239885.93182
[2025-11-23 20:25:27] 2025-11-23 19:20:17,059 | INFO     | sum of deviations: 575788492890.6084
[2025-11-23 20:25:27] 2025-11-23 19:20:17,059 | INFO     | mean x: 1763897025.0085378
[2025-11-23 20:25:27] 2025-11-23 19:20:17,059 | INFO     | mean y: 2273062.173959445
[2025-11-23 20:25:27] 2025-11-23 19:20:17,059 | INFO     | intersect: -3979155812.7226195
[2025-11-23 20:25:27] 2025-11-23 19:20:17,060 | INFO     | chi2: 4.234528555716658
[2025-11-23 20:25:27] 2025-11-23 19:20:17,061 | INFO     | sum of square deviations: 251030342910.9313
[2025-11-23 20:25:27] 2025-11-23 19:20:17,080 | INFO     | sum of deviations: 779779724435.56
[2025-11-23 20:25:27] 2025-11-23 19:20:17,080 | INFO     | mean x: 1763896872.5085838
[2025-11-23 20:25:27] 2025-11-23 19:20:17,080 | INFO     | mean y: 2280714.4924892704
[2025-11-23 20:25:27] 2025-11-23 19:20:17,081 | INFO     | intersect: -5476941443.386317
[2025-11-23 20:25:27] 2025-11-23 19:20:17,082 | INFO     | chi2: 1.9351448618762157
[2025-11-23 20:25:27] 2025-11-23 19:20:17,082 | INFO     | current chi2=1.9351448618762157 (change=54.30081917233147 %)
[2025-11-23 20:25:27] 2025-11-23 19:20:17,083 | INFO     | sum of square deviations: 247011795585.93112
[2025-11-23 20:25:27] 2025-11-23 19:20:17,102 | INFO     | sum of deviations: 812821063284.575
[2025-11-23 20:25:27] 2025-11-23 19:20:17,102 | INFO     | mean x: 1763896720.00863
[2025-11-23 20:25:27] 2025-11-23 19:20:17,102 | INFO     | mean y: 2281964.1779935276
[2025-11-23 20:25:27] 2025-11-23 19:20:17,102 | INFO     | intersect: -5802025494.421967
[2025-11-23 20:25:27] 2025-11-23 19:20:17,103 | INFO     | chi2: 1.7786992621162139
[2025-11-23 20:25:27] 2025-11-23 19:20:17,103 | INFO     | current chi2=1.7786992621162139 (change=8.084438681676797 %)
[2025-11-23 20:25:27] 2025-11-23 19:20:17,103 | INFO     | right removable region: 926
[2025-11-23 20:25:27] 2025-11-23 19:20:17,104 | INFO     | sum of square deviations: 251030338030.93124
[2025-11-23 20:25:27] 2025-11-23 19:20:17,123 | INFO     | sum of deviations: 427071934898.3089
[2025-11-23 20:25:27] 2025-11-23 19:20:17,124 | INFO     | mean x: 1763897177.5085838
[2025-11-23 20:25:27] 2025-11-23 19:20:17,124 | INFO     | mean y: 2278632.4613733906
[2025-11-23 20:25:27] 2025-11-23 19:20:17,124 | INFO     | intersect: -2998597622.055066
[2025-11-23 20:25:27] 2025-11-23 19:20:17,125 | INFO     | chi2: 2.5423496143357744
[2025-11-23 20:25:27] 2025-11-23 19:20:17,125 | INFO     | current chi2=2.5423496143357744 (change=39.961448343438946 %)
[2025-11-23 20:25:27] 2025-11-23 19:20:17,126 | INFO     | sum of square deviations: 247011785825.93115
[2025-11-23 20:25:27] 2025-11-23 19:20:17,146 | INFO     | sum of deviations: 413882682918.756
[2025-11-23 20:25:27] 2025-11-23 19:20:17,146 | INFO     | mean x: 1763897330.00863
[2025-11-23 20:25:27] 2025-11-23 19:20:17,146 | INFO     | mean y: 2279132.405609493
[2025-11-23 20:25:27] 2025-11-23 19:20:17,146 | INFO     | intersect: -2953233929.0305147
[2025-11-23 20:25:27] 2025-11-23 19:20:17,147 | INFO     | chi2: 2.5400509924215133
[2025-11-23 20:25:27] 2025-11-23 19:20:17,147 | INFO     | current chi2=2.5400509924215133 (change=0.09041328939574898 %)
[2025-11-23 20:25:27] 2025-11-23 19:20:17,147 | INFO     | left removable region: 20
[2025-11-23 20:25:27] 2025-11-23 19:20:17,148 | INFO     | sum of square deviations: 230602007008.42953
[2025-11-23 20:25:27] 2025-11-23 19:20:17,166 | INFO     | sum of deviations: 641400367606.5432
[2025-11-23 20:25:27] 2025-11-23 19:20:17,167 | INFO     | mean x: 1763897299.50883
[2025-11-23 20:25:27] 2025-11-23 19:20:17,167 | INFO     | mean y: 2288376.682119205
[2025-11-23 20:25:27] 2025-11-23 19:20:17,167 | INFO     | intersect: -4903845750.258919
[2025-11-23 20:25:27] 2025-11-23 19:20:17,168 | INFO     | chi2: 0.0652928334858189
[2025-11-23 20:25:27] 2025-11-23 19:20:17,168 | INFO     | current memory leak: 2.78 B/s (using 906 data points, chi2=0.07)
[2025-11-23 20:25:27] 2025-11-23 19:20:17,169 | INFO     | could have reported an average CPU frequency of 2707 MHz (35 samples)
[2025-11-23 20:25:27] 2025-11-23 19:20:17,169 | INFO     | ..............................
[2025-11-23 20:25:27] 2025-11-23 19:20:17,170 | INFO     | . Timing measurements:
[2025-11-23 20:25:27] 2025-11-23 19:20:17,170 | INFO     | . get job = 0 s
[2025-11-23 20:25:27] 2025-11-23 19:20:17,170 | INFO     | . initial setup = 1 s
[2025-11-23 20:25:27] 2025-11-23 19:20:17,170 | INFO     | . payload setup = 9 s
[2025-11-23 20:25:27] 2025-11-23 19:20:17,170 | INFO     | . stage-in = 0 s
[2025-11-23 20:25:27] 2025-11-23 19:20:17,170 | INFO     | . payload execution = 57131 s
[2025-11-23 20:25:27] 2025-11-23 19:20:17,170 | INFO     | . stage-out = 2 s
[2025-11-23 20:25:27] 2025-11-23 19:20:17,170 | INFO     | . log creation = 0 s
[2025-11-23 20:25:27] 2025-11-23 19:20:17,170 | INFO     | ..............................
[2025-11-23 20:25:27] 2025-11-23 19:20:17,271 | INFO     | 
[2025-11-23 20:25:27] 2025-11-23 19:20:17,271 | INFO     | job summary report
[2025-11-23 20:25:27] 2025-11-23 19:20:17,271 | INFO     | --------------------------------------------------
[2025-11-23 20:25:27] 2025-11-23 19:20:17,271 | INFO     | PanDA job id: 6893872241
[2025-11-23 20:25:27] 2025-11-23 19:20:17,272 | INFO     | task id: 47523449
[2025-11-23 20:25:27] 2025-11-23 19:20:17,272 | INFO     | errors: (none)
[2025-11-23 20:25:27] 2025-11-23 19:20:17,272 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 20:25:27] 2025-11-23 19:20:17,272 | INFO     | pilot state: finished 
[2025-11-23 20:25:27] 2025-11-23 19:20:17,272 | INFO     | transexitcode: 0
[2025-11-23 20:25:27] 2025-11-23 19:20:17,272 | INFO     | exeerrorcode: 0
[2025-11-23 20:25:27] 2025-11-23 19:20:17,272 | INFO     | exeerrordiag: 
[2025-11-23 20:25:27] 2025-11-23 19:20:17,272 | INFO     | exitcode: 0
[2025-11-23 20:25:27] 2025-11-23 19:20:17,272 | INFO     | exitmsg: OK
[2025-11-23 20:25:27] 2025-11-23 19:20:17,273 | INFO     | cpuconsumptiontime: 224945 s
[2025-11-23 20:25:27] 2025-11-23 19:20:17,273 | INFO     | nevents: 1000
[2025-11-23 20:25:27] 2025-11-23 19:20:17,273 | INFO     | neventsw: 0
[2025-11-23 20:25:27] 2025-11-23 19:20:17,273 | INFO     | pid: 1290295
[2025-11-23 20:25:27] 2025-11-23 19:20:17,273 | INFO     | pgrp: 1290295
[2025-11-23 20:25:27] 2025-11-23 19:20:17,273 | INFO     | corecount: 4
[2025-11-23 20:25:27] 2025-11-23 19:20:17,273 | INFO     | event service: False
[2025-11-23 20:25:27] 2025-11-23 19:20:17,273 | INFO     | sizes: {0: 2298818, 7: 2299080, 11: 2299108, 57143: 2352053, 57144: 2352052, 57146: 2361126, 57147: 2361310, 57156: 2361556}
[2025-11-23 20:25:27] 2025-11-23 19:20:17,273 | INFO     | --------------------------------------------------
[2025-11-23 20:25:27] 2025-11-23 19:20:17,273 | INFO     | 
[2025-11-23 20:25:27] 2025-11-23 19:20:17,274 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-11-23 20:25:27] 2025-11-23 19:20:17,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 20:25:27] 2025-11-23 19:20:17,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 20:25:27] 2025-11-23 19:20:17,306 | INFO     | job 6893872241 has completed (purged errors)
[2025-11-23 20:25:27] 2025-11-23 19:20:17,306 | INFO     | overall cleanup function is called
[2025-11-23 20:25:27] 2025-11-23 19:20:17,497 | INFO     | PID=1279905 has CPU usage=27.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-23 20:25:27] 2025-11-23 19:20:17,497 | INFO     | .. there are 8 such processes running
[2025-11-23 20:25:27] 2025-11-23 19:20:18,324 | INFO     | --- collectZombieJob: --- 10, [1290295]
[2025-11-23 20:25:27] 2025-11-23 19:20:18,324 | INFO     | zombie collector waiting for pid 1290295
[2025-11-23 20:25:27] 2025-11-23 19:20:18,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 20:25:27] 2025-11-23 19:20:18,325 | INFO     | collected zombie processes
[2025-11-23 20:25:27] 2025-11-23 19:20:18,325 | INFO     | will attempt to kill all subprocesses of pid=1290295
[2025-11-23 20:25:27] 2025-11-23 19:20:19,153 | INFO     | process IDs to be killed: [1290295] (in reverse order)
[2025-11-23 20:25:27] 2025-11-23 19:20:19,404 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 20:25:27] 2025-11-23 19:20:19,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 20:25:27] 2025-11-23 19:20:19,435 | INFO     | did not find any defunct processes belonging to 1290295
[2025-11-23 20:25:27] 2025-11-23 19:20:19,464 | INFO     | did not find any defunct processes belonging to 1290295
[2025-11-23 20:25:27] 2025-11-23 19:20:19,465 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 20:25:27] 2025-11-23 19:20:19,465 | INFO     | ready for new job
[2025-11-23 20:25:27] 2025-11-23 19:20:19,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 20:25:27] 2025-11-23 19:20:19,471 | INFO     | ***************************************
[2025-11-23 20:25:27] 2025-11-23 19:20:19,471 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 20:25:27] 2025-11-23 19:20:19,471 | INFO     | ***************************************
[2025-11-23 20:25:27] 2025-11-23 19:20:19,471 | INFO     | 
[2025-11-23 20:25:27] 2025-11-23 19:20:19,479 | INFO     | architecture information:
[2025-11-23 20:25:27] 2025-11-23 19:20:19,480 | INFO     | executing command: cat /etc/os-release
[2025-11-23 20:25:27] 2025-11-23 19:20:19,500 | INFO     | cat /etc/os-release:
[2025-11-23 20:25:27] NAME="CentOS Linux"
[2025-11-23 20:25:27] VERSION="7 (Core)"
[2025-11-23 20:25:27] ID="centos"
[2025-11-23 20:25:27] ID_LIKE="rhel fedora"
[2025-11-23 20:25:27] VERSION_ID="7"
[2025-11-23 20:25:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 20:25:27] ANSI_COLOR="0;31"
[2025-11-23 20:25:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 20:25:27] HOME_URL="https://www.centos.org/"
[2025-11-23 20:25:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 20:25:27] 
[2025-11-23 20:25:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 20:25:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 20:25:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 20:25:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 20:25:27] 
[2025-11-23 20:25:27] 2025-11-23 19:20:19,501 | INFO     | ***************************************
[2025-11-23 20:25:27] 2025-11-23 19:20:20,004 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-11-23 20:25:27] 2025-11-23 19:20:20,026 | INFO     | sufficient remaining disk space (3298950119424 B)
[2025-11-23 20:25:27] 2025-11-23 19:20:20,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 20:25:27] 2025-11-23 19:20:20,026 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 20:25:27] 2025-11-23 19:20:20,026 | INFO     | update_server=False
[2025-11-23 20:25:27] 2025-11-23 19:20:20,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 20:25:27] 2025-11-23 19:20:20,026 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 20:25:27] 2025-11-23 19:20:20,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:25:27] 2025-11-23 19:20:20,027 | INFO     | aborting loop
[2025-11-23 20:25:27] 2025-11-23 19:20:20,318 | INFO     | all payload control threads have been joined
[2025-11-23 20:25:27] 2025-11-23 19:20:20,890 | INFO     | all data control threads have been joined
[2025-11-23 20:25:27] 2025-11-23 19:20:21,027 | INFO     | [job] retrieve thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:21,032 | INFO     | [job] job monitor thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:21,115 | INFO     | all job control threads have been joined
[2025-11-23 20:25:27] 2025-11-23 19:20:21,227 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:21,323 | INFO     | [payload] control thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:21,389 | INFO     | [payload] validate_post thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:21,470 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:21,624 | INFO     | [job] validate thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:21,895 | INFO     | [data] control thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:22,032 | INFO     | [data] copytool_out thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:22,120 | INFO     | [job] control thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:22,144 | INFO     | [payload] failed_post thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:22,249 | INFO     | [data] copytool_in thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:22,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:25:27] 2025-11-23 19:20:22,363 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:23,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 20:25:27] 2025-11-23 19:20:23,286 | INFO     | [job] queue monitor thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:27,230 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:30,767 | INFO     | job.realtimelogging is not enabled
[2025-11-23 20:25:27] 2025-11-23 19:20:31,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 20:25:27] 2025-11-23 19:20:50,451 | INFO     | PID=1279905 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 20:25:27] 2025-11-23 19:20:50,451 | INFO     | .. there are 8 such processes running
[2025-11-23 20:25:27] 2025-11-23 19:20:50,451 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 20:25:27] 2025-11-23 19:20:50,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 20:25:27] 2025-11-23 19:20:50,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 20:25:27] 2025-11-23 19:20:56,758 | INFO     | [monitor] cgroup control has ended
[2025-11-23 20:25:27] 2025-11-23 19:20:57,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22594162878272)>', '<ExcThread(monitor, started 22593924990720)>']
[2025-11-23 20:25:27] 2025-11-23 19:20:58,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 20:25:27] 2025-11-23 19:20:58,497 | INFO     | [monitor] control thread has ended
[2025-11-23 20:25:27] 2025-11-23 19:21:02,990 | INFO     | all workflow threads have been joined
[2025-11-23 20:25:27] 2025-11-23 19:21:02,991 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 20:25:27] 2025-11-23 19:21:02,991 | INFO     | traces error code: 0
[2025-11-23 20:25:27] 2025-11-23 19:21:02,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 20:25:27] 2025-11-23 19:21:03,145 [wrapper] ==== pilot stdout END ====
[2025-11-23 20:25:27] 2025-11-23 19:21:03,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 20:25:27] 2025-11-23 19:21:03,153 [wrapper] pilotpid: 1279905
[2025-11-23 20:25:27] 2025-11-23 19:21:03,157 [wrapper] Pilot exit status: 0
[2025-11-23 20:25:27] 2025-11-23 19:21:03,173 [wrapper] pandaids: 6893872241
[2025-11-23 20:25:27] 2025-11-23 19:21:03,349 [wrapper] cleanup supervisor_pilot 2776613 1279906
[2025-11-23 20:25:27] 2025-11-23 19:21:03,354 [wrapper] Test setup, not cleaning
[2025-11-23 20:25:27] 2025-11-23 19:21:03,358 [wrapper] apfmon messages muted
[2025-11-23 20:25:27] 2025-11-23 19:21:03,361 [wrapper] ==== wrapper stdout END ====
[2025-11-23 20:25:27] 2025-11-23 19:21:03,366 [wrapper] ==== wrapper stderr END ====
[2025-11-23 20:25:27]  *** Error codes and diagnostics ***
[2025-11-23 20:25:27]     "exeErrorCode": 0,
[2025-11-23 20:25:27]     "exeErrorDiag": "",
[2025-11-23 20:25:27]     "pilotErrorCode": 0,
[2025-11-23 20:25:27]     "pilotErrorDiag": "",
[2025-11-23 20:25:27]  *** Listing of results directory ***
[2025-11-23 20:25:27] total 1329804
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc    576529 Nov 20 16:07 pilot3.tar.gz
[2025-11-23 20:25:27] -rwx------ 1 boinc boinc     36292 Nov 20 16:12 runpilot2-wrapper.sh
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc      5112 Nov 20 16:12 queuedata.json
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc       100 Nov 23 04:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 20:25:27] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 04:27 run_atlas
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc       105 Nov 23 04:27 job.xml
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc      6687 Nov 23 04:27 init_data.xml
[2025-11-23 20:25:27] -rw-r--r-- 2 boinc boinc 411382089 Nov 23 04:27 EVNT.47493127._000673.pool.root.1
[2025-11-23 20:25:27] -rw-r--r-- 2 boinc boinc     15847 Nov 23 04:27 start_atlas.sh
[2025-11-23 20:25:27] drwxrwx--x 2 boinc boinc      4096 Nov 23 04:27 shared
[2025-11-23 20:25:27] -rw-r--r-- 2 boinc boinc    590099 Nov 23 04:27 input.tar.gz
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc         0 Nov 23 04:27 boinc_lockfile
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc      2785 Nov 23 04:27 pandaJob.out
[2025-11-23 20:25:27] -rw------- 1 boinc boinc    989784 Nov 23 04:27 agis_schedconf.cvmfs.json
[2025-11-23 20:25:27] drwx------ 5 boinc boinc      4096 Nov 23 04:27 pilot3
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc       531 Nov 23 20:12 boinc_task_state.xml
[2025-11-23 20:25:27] -rw------- 1 boinc boinc 927290968 Nov 23 20:19 HITS.47523449._006729.pool.root.1
[2025-11-23 20:25:27] -rw------- 1 boinc boinc      1039 Nov 23 20:20 memory_monitor_summary.json
[2025-11-23 20:25:27] -rw------- 1 boinc boinc   1526164 Nov 23 20:20 agis_ddmendpoints.agis.ALL.json
[2025-11-23 20:25:27] -rw------- 1 boinc boinc   1678491 Nov 23 20:20 log.47523449._006729.job.log.tgz.1
[2025-11-23 20:25:27] -rw------- 1 boinc boinc        95 Nov 23 20:20 pilot_heartbeat.json
[2025-11-23 20:25:27] -rw------- 1 boinc boinc      7922 Nov 23 20:20 heartbeat.json
[2025-11-23 20:25:27] -rw------- 1 boinc boinc      4907 Nov 23 20:21 pilotlog.txt
[2025-11-23 20:25:27] -rw------- 1 boinc boinc   7883063 Nov 23 20:21 log.47523449._006729.job.log.1
[2025-11-23 20:25:27] -rw------- 1 boinc boinc       353 Nov 23 20:21 output.list
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc       620 Nov 23 20:21 runtime_log
[2025-11-23 20:25:27] -rw------- 1 boinc boinc   9584640 Nov 23 20:21 result.tar.gz
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc      9223 Nov 23 20:21 runtime_log.err
[2025-11-23 20:25:27] -rw------- 1 boinc boinc       671 Nov 23 20:21 ou3LDm7VLg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjqGKDm9Tq6On.diag
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc        28 Nov 23 20:25 wrapper_checkpoint.txt
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc      8192 Nov 23 20:25 boinc_mmap_file
[2025-11-23 20:25:27] -rw-r--r-- 1 boinc boinc     21164 Nov 23 20:25 stderr.txt
[2025-11-23 20:25:27] HITS file was successfully produced:
[2025-11-23 20:25:27] -rw------- 1 boinc boinc 927290968 Nov 23 20:19 shared/HITS.pool.root.1
[2025-11-23 20:25:27]  *** Contents of shared directory: ***
[2025-11-23 20:25:27] total 1317268
[2025-11-23 20:25:27] -rw-r--r-- 2 boinc boinc 411382089 Nov 23 04:27 ATLAS.root_0
[2025-11-23 20:25:27] -rw-r--r-- 2 boinc boinc     15847 Nov 23 04:27 start_atlas.sh
[2025-11-23 20:25:27] -rw-r--r-- 2 boinc boinc    590099 Nov 23 04:27 input.tar.gz
[2025-11-23 20:25:27] -rw------- 1 boinc boinc 927290968 Nov 23 20:19 HITS.pool.root.1
[2025-11-23 20:25:27] -rw------- 1 boinc boinc   9584640 Nov 23 20:21 result.tar.gz
20:25:28 (1274303): run_atlas exited; CPU time 227702.795909
20:25:28 (1274303): called boinc_finish(0)

</stderr_txt>
]]>

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