Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:14:48 (212655): wrapper (7.7.26015): starting
12:14:48 (212655): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 12:14:48] Arguments: --nthreads 4
[2025-11-24 12:14:48] Threads: 4
[2025-11-24 12:14:48] Checking for CVMFS
[2025-11-24 12:14:48] No cvmfs_config command found, will try listing directly
[2025-11-24 12:14:48] CVMFS is ok
[2025-11-24 12:14:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 12:14:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 12:14:48] Further information can be found at the LHC@home message board.
[2025-11-24 12:14:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 12:14:48] Checking for apptainer binary...
[2025-11-24 12:14:48] which: no apptainer in ((null))
[2025-11-24 12:14:48] apptainer is not installed, using version from CVMFS
[2025-11-24 12:14:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 12:14:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-11-24 12:14:49] apptainer works
[2025-11-24 12:14:49] Set ATHENA_PROC_NUMBER=4
[2025-11-24 12:14:49] Set ATHENA_CORE_NUMBER=4
[2025-11-24 12:14:49] Starting ATLAS job with PandaID=6893870206
[2025-11-24 12:14:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 04:22:19]  *** The last 200 lines of the pilot log: ***
[2025-11-25 04:22:19] 2025-11-25 03:21:00,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 04:22:19] 2025-11-25 03:21:00,825 | INFO     | time since job start (57957s) is within the limit (172800.0s)
[2025-11-25 04:22:19] 2025-11-25 03:21:00,825 | INFO     | 57958s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-25 04:22:19] 2025-11-25 03:21:02,386 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 04:22:19] 2025-11-25 03:21:02,407 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2697.6551484375004
[2025-11-25 04:22:19] 2025-11-25 03:21:02,435 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6893870206/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 04:22:19] 2025-11-25 03:21:02,435 | INFO     | extracted standard info from prmon json
[2025-11-25 04:22:19] 2025-11-25 03:21:02,436 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 04:22:19] 2025-11-25 03:21:02,436 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 04:22:19] 2025-11-25 03:21:02,452 | INFO     | fitting pss+swap vs Time
[2025-11-25 04:22:19] 2025-11-25 03:21:02,454 | INFO     | sum of square deviations: 265857375585.49057
[2025-11-25 04:22:19] 2025-11-25 03:21:02,475 | INFO     | sum of deviations: 604824683199.5247
[2025-11-25 04:22:19] 2025-11-25 03:21:02,476 | INFO     | mean x: 1764011883.5031579
[2025-11-25 04:22:19] 2025-11-25 03:21:02,476 | INFO     | mean y: 2271873.825263158
[2025-11-25 04:22:19] 2025-11-25 03:21:02,476 | INFO     | intersect: -4010849546.072716
[2025-11-25 04:22:19] 2025-11-25 03:21:02,477 | INFO     | chi2: 4.402715198212781
[2025-11-25 04:22:19] 2025-11-25 03:21:02,478 | INFO     | sum of square deviations: 261681679602.9906
[2025-11-25 04:22:19] 2025-11-25 03:21:02,499 | INFO     | sum of deviations: 812451628718.3341
[2025-11-25 04:22:19] 2025-11-25 03:21:02,499 | INFO     | mean x: 1764011731.0031745
[2025-11-25 04:22:19] 2025-11-25 03:21:02,499 | INFO     | mean y: 2279451.222222222
[2025-11-25 04:22:19] 2025-11-25 03:21:02,499 | INFO     | intersect: -5474505190.737093
[2025-11-25 04:22:19] 2025-11-25 03:21:02,500 | INFO     | chi2: 2.0610039628421046
[2025-11-25 04:22:19] 2025-11-25 03:21:02,500 | INFO     | current chi2=2.0610039628421046 (change=53.18788815413862 %)
[2025-11-25 04:22:19] 2025-11-25 03:21:02,501 | INFO     | sum of square deviations: 257549937932.99072
[2025-11-25 04:22:19] 2025-11-25 03:21:02,523 | INFO     | sum of deviations: 836709169114.6259
[2025-11-25 04:22:19] 2025-11-25 03:21:02,523 | INFO     | mean x: 1764011578.5031915
[2025-11-25 04:22:19] 2025-11-25 03:21:02,523 | INFO     | mean y: 2280342.624468085
[2025-11-25 04:22:19] 2025-11-25 03:21:02,523 | INFO     | intersect: -5728509864.523635
[2025-11-25 04:22:19] 2025-11-25 03:21:02,524 | INFO     | chi2: 1.9327223814099574
[2025-11-25 04:22:19] 2025-11-25 03:21:02,525 | INFO     | current chi2=1.9327223814099574 (change=6.22422779116097 %)
[2025-11-25 04:22:19] 2025-11-25 03:21:02,525 | INFO     | right removable region: 939
[2025-11-25 04:22:19] 2025-11-25 03:21:02,526 | INFO     | sum of square deviations: 261681677772.9906
[2025-11-25 04:22:19] 2025-11-25 03:21:02,547 | INFO     | sum of deviations: 435716759993.7816
[2025-11-25 04:22:19] 2025-11-25 03:21:02,547 | INFO     | mean x: 1764012036.0031745
[2025-11-25 04:22:19] 2025-11-25 03:21:02,547 | INFO     | mean y: 2278038.073015873
[2025-11-25 04:22:19] 2025-11-25 03:21:02,547 | INFO     | intersect: -2934915025.875878
[2025-11-25 04:22:19] 2025-11-25 03:21:02,548 | INFO     | chi2: 2.573211614363094
[2025-11-25 04:22:19] 2025-11-25 03:21:02,548 | INFO     | current chi2=2.573211614363094 (change=41.55398433658275 %)
[2025-11-25 04:22:19] 2025-11-25 03:21:02,549 | INFO     | sum of square deviations: 257549934272.99072
[2025-11-25 04:22:19] 2025-11-25 03:21:02,570 | INFO     | sum of deviations: 424309435158.1245
[2025-11-25 04:22:19] 2025-11-25 03:21:02,570 | INFO     | mean x: 1764012188.5031915
[2025-11-25 04:22:19] 2025-11-25 03:21:02,570 | INFO     | mean y: 2278458.458510638
[2025-11-25 04:22:19] 2025-11-25 03:21:02,570 | INFO     | intersect: -2903903666.6841636
[2025-11-25 04:22:19] 2025-11-25 03:21:02,571 | INFO     | chi2: 2.5711857455248865
[2025-11-25 04:22:19] 2025-11-25 03:21:02,571 | INFO     | current chi2=2.5711857455248865 (change=0.07872919688763157 %)
[2025-11-25 04:22:19] 2025-11-25 03:21:02,572 | INFO     | left removable region: 20
[2025-11-25 04:22:19] 2025-11-25 03:21:02,573 | INFO     | sum of square deviations: 240671348220.99005
[2025-11-25 04:22:19] 2025-11-25 03:21:02,592 | INFO     | sum of deviations: 650551431045.165
[2025-11-25 04:22:19] 2025-11-25 03:21:02,592 | INFO     | mean x: 1764012158.0032644
[2025-11-25 04:22:19] 2025-11-25 03:21:02,593 | INFO     | mean y: 2287161.6115342765
[2025-11-25 04:22:19] 2025-11-25 03:21:02,593 | INFO     | intersect: -4765960667.857382
[2025-11-25 04:22:19] 2025-11-25 03:21:02,594 | INFO     | chi2: 0.07878543896255996
[2025-11-25 04:22:19] 2025-11-25 03:21:02,594 | INFO     | current memory leak: 2.70 B/s (using 919 data points, chi2=0.08)
[2025-11-25 04:22:19] 2025-11-25 03:21:02,595 | INFO     | could have reported an average CPU frequency of 2661 MHz (35 samples)
[2025-11-25 04:22:19] 2025-11-25 03:21:02,595 | INFO     | ..............................
[2025-11-25 04:22:19] 2025-11-25 03:21:02,596 | INFO     | . Timing measurements:
[2025-11-25 04:22:19] 2025-11-25 03:21:02,596 | INFO     | . get job = 0 s
[2025-11-25 04:22:19] 2025-11-25 03:21:02,596 | INFO     | . initial setup = 1 s
[2025-11-25 04:22:19] 2025-11-25 03:21:02,596 | INFO     | . payload setup = 9 s
[2025-11-25 04:22:19] 2025-11-25 03:21:02,596 | INFO     | . stage-in = 0 s
[2025-11-25 04:22:19] 2025-11-25 03:21:02,596 | INFO     | . payload execution = 57915 s
[2025-11-25 04:22:19] 2025-11-25 03:21:02,596 | INFO     | . stage-out = 2 s
[2025-11-25 04:22:19] 2025-11-25 03:21:02,596 | INFO     | . log creation = 0 s
[2025-11-25 04:22:19] 2025-11-25 03:21:02,596 | INFO     | ..............................
[2025-11-25 04:22:19] 2025-11-25 03:21:02,700 | INFO     | 
[2025-11-25 04:22:19] 2025-11-25 03:21:02,700 | INFO     | job summary report
[2025-11-25 04:22:19] 2025-11-25 03:21:02,700 | INFO     | --------------------------------------------------
[2025-11-25 04:22:19] 2025-11-25 03:21:02,700 | INFO     | PanDA job id: 6893870206
[2025-11-25 04:22:19] 2025-11-25 03:21:02,700 | INFO     | task id: 47523449
[2025-11-25 04:22:19] 2025-11-25 03:21:02,700 | INFO     | errors: (none)
[2025-11-25 04:22:19] 2025-11-25 03:21:02,700 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 04:22:19] 2025-11-25 03:21:02,700 | INFO     | pilot state: finished 
[2025-11-25 04:22:19] 2025-11-25 03:21:02,700 | INFO     | transexitcode: 0
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | exeerrorcode: 0
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | exeerrordiag: 
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | exitcode: 0
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | exitmsg: OK
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | cpuconsumptiontime: 229199 s
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | nevents: 1000
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | neventsw: 0
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | pid: 224699
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | pgrp: 224699
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | corecount: 4
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | event service: False
[2025-11-25 04:22:19] 2025-11-25 03:21:02,701 | INFO     | sizes: {0: 2298596, 1: 2298795, 8: 2299057, 12: 2299085, 57928: 2353456, 57932: 2363265, 57933: 2363449, 57941: 2363695}
[2025-11-25 04:22:19] 2025-11-25 03:21:02,702 | INFO     | --------------------------------------------------
[2025-11-25 04:22:19] 2025-11-25 03:21:02,702 | INFO     | 
[2025-11-25 04:22:19] 2025-11-25 03:21:02,702 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-11-25 04:22:19] 2025-11-25 03:21:02,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,731 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,731 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,731 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,731 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,732 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,732 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,732 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 04:22:19] 2025-11-25 03:21:02,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,733 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 04:22:19] 2025-11-25 03:21:02,733 | INFO     | job 6893870206 has completed (purged errors)
[2025-11-25 04:22:19] 2025-11-25 03:21:02,733 | INFO     | overall cleanup function is called
[2025-11-25 04:22:19] 2025-11-25 03:21:03,750 | INFO     | --- collectZombieJob: --- 10, [224699]
[2025-11-25 04:22:19] 2025-11-25 03:21:03,750 | INFO     | zombie collector waiting for pid 224699
[2025-11-25 04:22:19] 2025-11-25 03:21:03,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 04:22:19] 2025-11-25 03:21:03,750 | INFO     | collected zombie processes
[2025-11-25 04:22:19] 2025-11-25 03:21:03,750 | INFO     | will attempt to kill all subprocesses of pid=224699
[2025-11-25 04:22:19] 2025-11-25 03:21:04,575 | INFO     | process IDs to be killed: [224699] (in reverse order)
[2025-11-25 04:22:19] 2025-11-25 03:21:04,834 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 04:22:19] 2025-11-25 03:21:04,835 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 04:22:19] 2025-11-25 03:21:04,870 | INFO     | did not find any defunct processes belonging to 224699
[2025-11-25 04:22:19] 2025-11-25 03:21:04,907 | INFO     | did not find any defunct processes belonging to 224699
[2025-11-25 04:22:19] 2025-11-25 03:21:04,908 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 04:22:19] 2025-11-25 03:21:04,908 | INFO     | ready for new job
[2025-11-25 04:22:19] 2025-11-25 03:21:04,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 04:22:19] 2025-11-25 03:21:04,916 | INFO     | ***************************************
[2025-11-25 04:22:19] 2025-11-25 03:21:04,917 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 04:22:19] 2025-11-25 03:21:04,917 | INFO     | ***************************************
[2025-11-25 04:22:19] 2025-11-25 03:21:04,917 | INFO     | 
[2025-11-25 04:22:19] 2025-11-25 03:21:04,926 | INFO     | architecture information:
[2025-11-25 04:22:19] 2025-11-25 03:21:04,926 | INFO     | executing command: cat /etc/os-release
[2025-11-25 04:22:19] 2025-11-25 03:21:04,951 | INFO     | cat /etc/os-release:
[2025-11-25 04:22:19] NAME="CentOS Linux"
[2025-11-25 04:22:19] VERSION="7 (Core)"
[2025-11-25 04:22:19] ID="centos"
[2025-11-25 04:22:19] ID_LIKE="rhel fedora"
[2025-11-25 04:22:19] VERSION_ID="7"
[2025-11-25 04:22:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 04:22:19] ANSI_COLOR="0;31"
[2025-11-25 04:22:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 04:22:19] HOME_URL="https://www.centos.org/"
[2025-11-25 04:22:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 04:22:19] 
[2025-11-25 04:22:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 04:22:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 04:22:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 04:22:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 04:22:19] 
[2025-11-25 04:22:19] 2025-11-25 03:21:04,951 | INFO     | ***************************************
[2025-11-25 04:22:19] 2025-11-25 03:21:05,455 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-11-25 04:22:19] 2025-11-25 03:21:05,479 | INFO     | sufficient remaining disk space (3298215067648 B)
[2025-11-25 04:22:19] 2025-11-25 03:21:05,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 04:22:19] 2025-11-25 03:21:05,480 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 04:22:19] 2025-11-25 03:21:05,480 | INFO     | update_server=False
[2025-11-25 04:22:19] 2025-11-25 03:21:05,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 04:22:19] 2025-11-25 03:21:05,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 04:22:19] 2025-11-25 03:21:06,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:22:19] 2025-11-25 03:21:06,184 | INFO     | aborting loop
[2025-11-25 04:22:19] 2025-11-25 03:21:06,186 | INFO     | all payload control threads have been joined
[2025-11-25 04:22:19] 2025-11-25 03:21:06,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 04:22:19] 2025-11-25 03:21:06,488 | INFO     | [job] retrieve thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:06,491 | INFO     | all data control threads have been joined
[2025-11-25 04:22:19] 2025-11-25 03:21:06,696 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:06,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:06,967 | INFO     | all job control threads have been joined
[2025-11-25 04:22:19] 2025-11-25 03:21:07,031 | INFO     | [job] validate thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:07,189 | INFO     | [job] job monitor thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:07,191 | INFO     | [payload] control thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:07,194 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:07,324 | INFO     | [payload] validate_post thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:07,496 | INFO     | [data] control thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:07,579 | INFO     | [data] copytool_in thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:07,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:22:19] 2025-11-25 03:21:07,896 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:07,972 | INFO     | [job] control thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:07,994 | INFO     | [payload] failed_post thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:08,484 | INFO     | [data] copytool_out thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:08,714 | INFO     | [job] queue monitor thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:09,490 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 04:22:19] 2025-11-25 03:21:34,969 | INFO     | PID=216749 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 04:22:19] 2025-11-25 03:21:34,969 | INFO     | .. there are 7 such processes running
[2025-11-25 04:22:19] 2025-11-25 03:21:34,970 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 04:22:19] 2025-11-25 03:21:34,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 04:22:19] 2025-11-25 03:21:34,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 04:22:19] 2025-11-25 03:21:39,661 | INFO     | [monitor] cgroup control has ended
[2025-11-25 04:22:19] 2025-11-25 03:21:40,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23455929247552)>', '<ExcThread(monitor, started 23455692982016)>']
[2025-11-25 04:22:19] 2025-11-25 03:21:40,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 04:22:19] 2025-11-25 03:21:41,000 | INFO     | [monitor] control thread has ended
[2025-11-25 04:22:19] 2025-11-25 03:21:45,572 | INFO     | all workflow threads have been joined
[2025-11-25 04:22:19] 2025-11-25 03:21:45,574 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 04:22:19] 2025-11-25 03:21:45,574 | INFO     | traces error code: 0
[2025-11-25 04:22:19] 2025-11-25 03:21:45,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 04:22:19] 2025-11-25 03:21:45,730 [wrapper] ==== pilot stdout END ====
[2025-11-25 04:22:19] 2025-11-25 03:21:45,734 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 04:22:19] 2025-11-25 03:21:45,738 [wrapper] pilotpid: 216749
[2025-11-25 04:22:19] 2025-11-25 03:21:45,742 [wrapper] Pilot exit status: 0
[2025-11-25 04:22:19] 2025-11-25 03:21:45,757 [wrapper] pandaids: 6893870206
[2025-11-25 04:22:19] 2025-11-25 03:21:45,942 [wrapper] cleanup supervisor_pilot 1733493 216750
[2025-11-25 04:22:19] 2025-11-25 03:21:45,947 [wrapper] Test setup, not cleaning
[2025-11-25 04:22:19] 2025-11-25 03:21:45,950 [wrapper] apfmon messages muted
[2025-11-25 04:22:19] 2025-11-25 03:21:45,954 [wrapper] ==== wrapper stdout END ====
[2025-11-25 04:22:19] 2025-11-25 03:21:45,958 [wrapper] ==== wrapper stderr END ====
[2025-11-25 04:22:19]  *** Error codes and diagnostics ***
[2025-11-25 04:22:19]     "exeErrorCode": 0,
[2025-11-25 04:22:19]     "exeErrorDiag": "",
[2025-11-25 04:22:19]     "pilotErrorCode": 0,
[2025-11-25 04:22:19]     "pilotErrorDiag": "",
[2025-11-25 04:22:19]  *** Listing of results directory ***
[2025-11-25 04:22:19] total 1323952
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:50 pilot3.tar.gz
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:52 queuedata.json
[2025-11-25 04:22:19] -rwx------ 1 boinc boinc     36292 Nov 20 15:53 runpilot2-wrapper.sh
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc       100 Nov 24 12:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 04:22:19] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 12:14 run_atlas
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc       105 Nov 24 12:14 job.xml
[2025-11-25 04:22:19] -rw-r--r-- 2 boinc boinc 409265979 Nov 24 12:14 EVNT.47493127._000649.pool.root.1
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc      6687 Nov 24 12:14 init_data.xml
[2025-11-25 04:22:19] -rw-r--r-- 2 boinc boinc     15847 Nov 24 12:14 start_atlas.sh
[2025-11-25 04:22:19] drwxrwx--x 2 boinc boinc      4096 Nov 24 12:14 shared
[2025-11-25 04:22:19] -rw-r--r-- 2 boinc boinc    590096 Nov 24 12:14 input.tar.gz
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc         0 Nov 24 12:14 boinc_lockfile
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc      2784 Nov 24 12:14 pandaJob.out
[2025-11-25 04:22:19] -rw------- 1 boinc boinc    989803 Nov 24 12:15 agis_schedconf.cvmfs.json
[2025-11-25 04:22:19] drwx------ 5 boinc boinc      4096 Nov 24 12:15 pilot3
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc       532 Nov 25 04:13 boinc_task_state.xml
[2025-11-25 04:22:19] -rw------- 1 boinc boinc 923269620 Nov 25 04:20 HITS.47523449._006489.pool.root.1
[2025-11-25 04:22:19] -rw------- 1 boinc boinc      1041 Nov 25 04:20 memory_monitor_summary.json
[2025-11-25 04:22:19] -rw------- 1 boinc boinc   1516227 Nov 25 04:20 agis_ddmendpoints.agis.ALL.json
[2025-11-25 04:22:19] -rw------- 1 boinc boinc   1698625 Nov 25 04:20 log.47523449._006489.job.log.tgz.1
[2025-11-25 04:22:19] -rw------- 1 boinc boinc      8598 Nov 25 04:21 heartbeat.json
[2025-11-25 04:22:19] -rw------- 1 boinc boinc        95 Nov 25 04:21 pilot_heartbeat.json
[2025-11-25 04:22:19] -rw------- 1 boinc boinc      4834 Nov 25 04:21 pilotlog.txt
[2025-11-25 04:22:19] -rw------- 1 boinc boinc   7938184 Nov 25 04:21 log.47523449._006489.job.log.1
[2025-11-25 04:22:19] -rw------- 1 boinc boinc       353 Nov 25 04:21 output.list
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc       620 Nov 25 04:21 runtime_log
[2025-11-25 04:22:19] -rw------- 1 boinc boinc   9656320 Nov 25 04:21 result.tar.gz
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc      9223 Nov 25 04:21 runtime_log.err
[2025-11-25 04:22:19] -rw------- 1 boinc boinc       670 Nov 25 04:21 pP9NDmKDLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmm9HKDm5ID11n.diag
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc      8192 Nov 25 04:22 boinc_mmap_file
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc        28 Nov 25 04:22 wrapper_checkpoint.txt
[2025-11-25 04:22:19] -rw-r--r-- 1 boinc boinc     21134 Nov 25 04:22 stderr.txt
[2025-11-25 04:22:19] HITS file was successfully produced:
[2025-11-25 04:22:19] -rw------- 1 boinc boinc 923269620 Nov 25 04:20 shared/HITS.pool.root.1
[2025-11-25 04:22:19]  *** Contents of shared directory: ***
[2025-11-25 04:22:19] total 1311344
[2025-11-25 04:22:19] -rw-r--r-- 2 boinc boinc 409265979 Nov 24 12:14 ATLAS.root_0
[2025-11-25 04:22:19] -rw-r--r-- 2 boinc boinc     15847 Nov 24 12:14 start_atlas.sh
[2025-11-25 04:22:19] -rw-r--r-- 2 boinc boinc    590096 Nov 24 12:14 input.tar.gz
[2025-11-25 04:22:19] -rw------- 1 boinc boinc 923269620 Nov 25 04:20 HITS.pool.root.1
[2025-11-25 04:22:19] -rw------- 1 boinc boinc   9656320 Nov 25 04:21 result.tar.gz
04:22:21 (212655): run_atlas exited; CPU time 232394.441646
04:22:21 (212655): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN