Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:54:35 (3324612): wrapper (7.7.26015): starting
22:54:35 (3324612): wrapper: running run_atlas (--nthreads 9)
[2025-11-20 22:54:35] Arguments: --nthreads 9
[2025-11-20 22:54:35] Threads: 9
[2025-11-20 22:54:35] Checking for CVMFS
[2025-11-20 22:54:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 22:54:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 22:54:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 22:54:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 22:54:36] 2.13.2.0 5622 22460 168320 153106 0 144 35812906 39288832 3417 16776704 0 13769901 99.626 11948653 34806 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 22:54:36] CVMFS is ok
[2025-11-20 22:54:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 22:54:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 22:54:36] Further information can be found at the LHC@home message board.
[2025-11-20 22:54:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 22:54:36] Checking for apptainer binary...
[2025-11-20 22:54:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 22:54:36] Running /usr/bin/apptainer --version
[2025-11-20 22:54:36] apptainer version 1.4.4-1.el9
[2025-11-20 22:54:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 22:54:36] c-210-28.aglt2.org
[2025-11-20 22:54:36] apptainer works
[2025-11-20 22:54:36] Set ATHENA_PROC_NUMBER=9
[2025-11-20 22:54:36] Set ATHENA_CORE_NUMBER=9
[2025-11-20 22:54:36] Starting ATLAS job with PandaID=6893852883
[2025-11-20 22:54:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 08:29:49]  *** The last 200 lines of the pilot log: ***
[2025-11-21 08:29:49] 2025-11-21 13:28:48,171 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 08:29:49] 2025-11-21 13:28:48,171 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 08:29:49] 2025-11-21 13:28:48,182 | INFO     | fitting pss+swap vs Time
[2025-11-21 08:29:49] 2025-11-21 13:28:48,183 | INFO     | sum of square deviations: 55927421913.88677
[2025-11-21 08:29:49] 2025-11-21 13:28:48,192 | INFO     | sum of deviations: 556987951712.2661
[2025-11-21 08:29:49] 2025-11-21 13:28:48,192 | INFO     | mean x: 1763714513.3858407
[2025-11-21 08:29:49] 2025-11-21 13:28:48,192 | INFO     | mean y: 3078310.2831858406
[2025-11-21 08:29:49] 2025-11-21 13:28:48,192 | INFO     | intersect: -17561967611.707615
[2025-11-21 08:29:49] 2025-11-21 13:28:48,193 | INFO     | chi2: 6.509483809316104
[2025-11-21 08:29:49] 2025-11-21 13:28:48,194 | INFO     | sum of square deviations: 54455795693.13581
[2025-11-21 08:29:49] 2025-11-21 13:28:48,202 | INFO     | sum of deviations: 755491996949.2002
[2025-11-21 08:29:49] 2025-11-21 13:28:48,202 | INFO     | mean x: 1763714360.8892858
[2025-11-21 08:29:49] 2025-11-21 13:28:48,202 | INFO     | mean y: 3098865.6
[2025-11-21 08:29:49] 2025-11-21 13:28:48,202 | INFO     | intersect: -24465776624.987827
[2025-11-21 08:29:49] 2025-11-21 13:28:48,203 | INFO     | chi2: 3.295107348296751
[2025-11-21 08:29:49] 2025-11-21 13:28:48,203 | INFO     | current chi2=3.295107348296751 (change=49.37989793321355 %)
[2025-11-21 08:29:49] 2025-11-21 13:28:48,204 | INFO     | sum of square deviations: 53010216472.371254
[2025-11-21 08:29:49] 2025-11-21 13:28:48,212 | INFO     | sum of deviations: 869760531230.1176
[2025-11-21 08:29:49] 2025-11-21 13:28:48,212 | INFO     | mean x: 1763714208.3927927
[2025-11-21 08:29:49] 2025-11-21 13:28:48,212 | INFO     | mean y: 3110920.279279279
[2025-11-21 08:29:49] 2025-11-21 13:28:48,212 | INFO     | intersect: -28934877054.724407
[2025-11-21 08:29:49] 2025-11-21 13:28:48,213 | INFO     | chi2: 2.1498399184206622
[2025-11-21 08:29:49] 2025-11-21 13:28:48,213 | INFO     | current chi2=2.1498399184206622 (change=34.75660452968491 %)
[2025-11-21 08:29:49] 2025-11-21 13:28:48,214 | INFO     | sum of square deviations: 51590451689.09285
[2025-11-21 08:29:49] 2025-11-21 13:28:48,222 | INFO     | sum of deviations: 886884369553.6852
[2025-11-21 08:29:49] 2025-11-21 13:28:48,222 | INFO     | mean x: 1763714055.8963637
[2025-11-21 08:29:49] 2025-11-21 13:28:48,222 | INFO     | mean y: 3112742.292727273
[2025-11-21 08:29:49] 2025-11-21 13:28:48,222 | INFO     | intersect: -30316653364.10331
[2025-11-21 08:29:49] 2025-11-21 13:28:48,223 | INFO     | chi2: 1.9836242830048676
[2025-11-21 08:29:49] 2025-11-21 13:28:48,223 | INFO     | current chi2=1.9836242830048676 (change=7.731535450225602 %)
[2025-11-21 08:29:49] 2025-11-21 13:28:48,223 | INFO     | right removable region: 549
[2025-11-21 08:29:49] 2025-11-21 13:28:48,224 | INFO     | sum of square deviations: 54455731276.685745
[2025-11-21 08:29:49] 2025-11-21 13:28:48,232 | INFO     | sum of deviations: 416284755874.2864
[2025-11-21 08:29:49] 2025-11-21 13:28:48,232 | INFO     | mean x: 1763714665.8857143
[2025-11-21 08:29:49] 2025-11-21 13:28:48,232 | INFO     | mean y: 3092846.723214286
[2025-11-21 08:29:49] 2025-11-21 13:28:48,232 | INFO     | intersect: -13479556488.930294
[2025-11-21 08:29:49] 2025-11-21 13:28:48,233 | INFO     | chi2: 4.691715046910913
[2025-11-21 08:29:49] 2025-11-21 13:28:48,233 | INFO     | current chi2=4.691715046910913 (change=27.92492946681388 %)
[2025-11-21 08:29:49] 2025-11-21 13:28:48,234 | INFO     | sum of square deviations: 53010053601.711845
[2025-11-21 08:29:49] 2025-11-21 13:28:48,242 | INFO     | sum of deviations: 384927317421.44183
[2025-11-21 08:29:49] 2025-11-21 13:28:48,242 | INFO     | mean x: 1763714818.3873873
[2025-11-21 08:29:49] 2025-11-21 13:28:48,242 | INFO     | mean y: 3096150.863063063
[2025-11-21 08:29:49] 2025-11-21 13:28:48,242 | INFO     | intersect: -12803946430.89314
[2025-11-21 08:29:49] 2025-11-21 13:28:48,243 | INFO     | chi2: 4.6672175990902955
[2025-11-21 08:29:49] 2025-11-21 13:28:48,243 | INFO     | current chi2=4.6672175990902955 (change=0.5221427042280987 %)
[2025-11-21 08:29:49] 2025-11-21 13:28:48,243 | INFO     | left removable region: 20
[2025-11-21 08:29:49] 2025-11-21 13:28:48,244 | INFO     | sum of square deviations: 45903753432.635284
[2025-11-21 08:29:49] 2025-11-21 13:28:48,251 | INFO     | sum of deviations: 672306941578.2704
[2025-11-21 08:29:49] 2025-11-21 13:28:48,251 | INFO     | mean x: 1763714635.3969755
[2025-11-21 08:29:49] 2025-11-21 13:28:48,251 | INFO     | mean y: 3135863.7939508506
[2025-11-21 08:29:49] 2025-11-21 13:28:48,252 | INFO     | intersect: -25828250540.821064
[2025-11-21 08:29:49] 2025-11-21 13:28:48,252 | INFO     | chi2: 0.11236157689919106
[2025-11-21 08:29:49] 2025-11-21 13:28:48,253 | INFO     | current memory leak: 14.65 B/s (using 529 data points, chi2=0.11)
[2025-11-21 08:29:49] 2025-11-21 13:28:48,253 | INFO     | could have reported an average CPU frequency of 2606 MHz (23 samples)
[2025-11-21 08:29:49] 2025-11-21 13:28:48,254 | INFO     | ..............................
[2025-11-21 08:29:49] 2025-11-21 13:28:48,254 | INFO     | . Timing measurements:
[2025-11-21 08:29:49] 2025-11-21 13:28:48,254 | INFO     | . get job = 0 s
[2025-11-21 08:29:49] 2025-11-21 13:28:48,254 | INFO     | . initial setup = 2 s
[2025-11-21 08:29:49] 2025-11-21 13:28:48,254 | INFO     | . payload setup = 5 s
[2025-11-21 08:29:49] 2025-11-21 13:28:48,254 | INFO     | . stage-in = 0 s
[2025-11-21 08:29:49] 2025-11-21 13:28:48,254 | INFO     | . payload execution = 34408 s
[2025-11-21 08:29:49] 2025-11-21 13:28:48,254 | INFO     | . stage-out = 3 s
[2025-11-21 08:29:49] 2025-11-21 13:28:48,254 | INFO     | . log creation = 0 s
[2025-11-21 08:29:49] 2025-11-21 13:28:48,255 | INFO     | ..............................
[2025-11-21 08:29:49] 2025-11-21 13:28:48,359 | INFO     | 
[2025-11-21 08:29:49] 2025-11-21 13:28:48,359 | INFO     | job summary report
[2025-11-21 08:29:49] 2025-11-21 13:28:48,359 | INFO     | --------------------------------------------------
[2025-11-21 08:29:49] 2025-11-21 13:28:48,359 | INFO     | PanDA job id: 6893852883
[2025-11-21 08:29:49] 2025-11-21 13:28:48,359 | INFO     | task id: 47523449
[2025-11-21 08:29:49] 2025-11-21 13:28:48,359 | INFO     | errors: (none)
[2025-11-21 08:29:49] 2025-11-21 13:28:48,359 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 08:29:49] 2025-11-21 13:28:48,360 | INFO     | pilot state: finished 
[2025-11-21 08:29:49] 2025-11-21 13:28:48,360 | INFO     | transexitcode: 0
[2025-11-21 08:29:49] 2025-11-21 13:28:48,360 | INFO     | exeerrorcode: 0
[2025-11-21 08:29:49] 2025-11-21 13:28:48,360 | INFO     | exeerrordiag: 
[2025-11-21 08:29:49] 2025-11-21 13:28:48,360 | INFO     | exitcode: 0
[2025-11-21 08:29:49] 2025-11-21 13:28:48,360 | INFO     | exitmsg: OK
[2025-11-21 08:29:49] 2025-11-21 13:28:48,360 | INFO     | cpuconsumptiontime: 281046 s
[2025-11-21 08:29:49] 2025-11-21 13:28:48,360 | INFO     | nevents: 1000
[2025-11-21 08:29:49] 2025-11-21 13:28:48,360 | INFO     | neventsw: 0
[2025-11-21 08:29:49] 2025-11-21 13:28:48,361 | INFO     | pid: 3335419
[2025-11-21 08:29:49] 2025-11-21 13:28:48,361 | INFO     | pgrp: 3335419
[2025-11-21 08:29:49] 2025-11-21 13:28:48,361 | INFO     | corecount: 9
[2025-11-21 08:29:49] 2025-11-21 13:28:48,361 | INFO     | event service: False
[2025-11-21 08:29:49] 2025-11-21 13:28:48,361 | INFO     | sizes: {0: 2298756, 4: 2299018, 11: 2299046, 34417: 2339912, 34421: 2348962, 34426: 2349152}
[2025-11-21 08:29:49] 2025-11-21 13:28:48,361 | INFO     | --------------------------------------------------
[2025-11-21 08:29:49] 2025-11-21 13:28:48,361 | INFO     | 
[2025-11-21 08:29:49] 2025-11-21 13:28:48,362 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-21 08:29:49] 2025-11-21 13:28:48,381 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,382 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,382 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,384 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 08:29:49] 2025-11-21 13:28:48,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 08:29:49] 2025-11-21 13:28:48,384 | INFO     | job 6893852883 has completed (purged errors)
[2025-11-21 08:29:49] 2025-11-21 13:28:48,384 | INFO     | overall cleanup function is called
[2025-11-21 08:29:49] 2025-11-21 13:28:49,401 | INFO     | --- collectZombieJob: --- 10, [3335419]
[2025-11-21 08:29:49] 2025-11-21 13:28:49,401 | INFO     | zombie collector waiting for pid 3335419
[2025-11-21 08:29:49] 2025-11-21 13:28:49,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 08:29:49] 2025-11-21 13:28:49,402 | INFO     | collected zombie processes
[2025-11-21 08:29:49] 2025-11-21 13:28:49,402 | INFO     | will attempt to kill all subprocesses of pid=3335419
[2025-11-21 08:29:49] 2025-11-21 13:28:49,639 | INFO     | process IDs to be killed: [3335419] (in reverse order)
[2025-11-21 08:29:49] 2025-11-21 13:28:49,707 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 08:29:49] 2025-11-21 13:28:49,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 08:29:49] 2025-11-21 13:28:49,714 | INFO     | did not find any defunct processes belonging to 3335419
[2025-11-21 08:29:49] 2025-11-21 13:28:49,720 | INFO     | did not find any defunct processes belonging to 3335419
[2025-11-21 08:29:49] 2025-11-21 13:28:49,721 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 08:29:49] 2025-11-21 13:28:49,721 | INFO     | ready for new job
[2025-11-21 08:29:49] 2025-11-21 13:28:49,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 08:29:49] 2025-11-21 13:28:49,725 | INFO     | ***************************************
[2025-11-21 08:29:49] 2025-11-21 13:28:49,725 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 08:29:49] 2025-11-21 13:28:49,725 | INFO     | ***************************************
[2025-11-21 08:29:49] 2025-11-21 13:28:49,725 | INFO     | 
[2025-11-21 08:29:49] 2025-11-21 13:28:49,727 | INFO     | architecture information:
[2025-11-21 08:29:49] 2025-11-21 13:28:49,728 | INFO     | executing command: cat /etc/os-release
[2025-11-21 08:29:49] 2025-11-21 13:28:49,740 | INFO     | cat /etc/os-release:
[2025-11-21 08:29:49] NAME="CentOS Linux"
[2025-11-21 08:29:49] VERSION="7 (Core)"
[2025-11-21 08:29:49] ID="centos"
[2025-11-21 08:29:49] ID_LIKE="rhel fedora"
[2025-11-21 08:29:49] VERSION_ID="7"
[2025-11-21 08:29:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 08:29:49] ANSI_COLOR="0;31"
[2025-11-21 08:29:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 08:29:49] HOME_URL="https://www.centos.org/"
[2025-11-21 08:29:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 08:29:49] 
[2025-11-21 08:29:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 08:29:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 08:29:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 08:29:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 08:29:49] 
[2025-11-21 08:29:49] 2025-11-21 13:28:49,741 | INFO     | ***************************************
[2025-11-21 08:29:49] 2025-11-21 13:28:50,243 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-21 08:29:49] 2025-11-21 13:28:50,257 | INFO     | sufficient remaining disk space (46878687232 B)
[2025-11-21 08:29:49] 2025-11-21 13:28:50,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 08:29:49] 2025-11-21 13:28:50,257 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 08:29:49] 2025-11-21 13:28:50,257 | INFO     | update_server=False
[2025-11-21 08:29:49] 2025-11-21 13:28:50,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 08:29:49] 2025-11-21 13:28:50,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 08:29:49] 2025-11-21 13:28:50,397 | INFO     | all data control threads have been joined
[2025-11-21 08:29:49] 2025-11-21 13:28:50,462 | INFO     | all payload control threads have been joined
[2025-11-21 08:29:49] 2025-11-21 13:28:50,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 08:29:49] 2025-11-21 13:28:51,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 08:29:49] 2025-11-21 13:28:51,244 | INFO     | aborting loop
[2025-11-21 08:29:49] 2025-11-21 13:28:51,262 | INFO     | [job] retrieve thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:51,263 | INFO     | [job] queue monitor thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:51,350 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:51,403 | INFO     | [data] control thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:51,461 | INFO     | [payload] validate_post thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:51,467 | INFO     | [payload] control thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:51,472 | INFO     | [payload] failed_post thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:51,517 | INFO     | [data] copytool_in thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:51,739 | INFO     | [job] validate thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:51,878 | INFO     | all job control threads have been joined
[2025-11-21 08:29:49] 2025-11-21 13:28:52,034 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:52,250 | INFO     | [job] job monitor thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:52,368 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:52,483 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:52,869 | INFO     | [data] copytool_out thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:52,881 | INFO     | [job] control thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:28:53,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 08:29:49] 2025-11-21 13:28:57,470 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 08:29:49] 2025-11-21 13:29:20,726 | INFO     | PID=3328708 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 08:29:49] 2025-11-21 13:29:20,726 | INFO     | .. there are 5 such processes running
[2025-11-21 08:29:49] 2025-11-21 13:29:20,727 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 08:29:49] 2025-11-21 13:29:20,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 08:29:49] 2025-11-21 13:29:20,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 08:29:49] 2025-11-21 13:29:44,039 | INFO     | [monitor] cgroup control has ended
[2025-11-21 08:29:49] 2025-11-21 13:29:44,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113177102144)>', '<ExcThread(monitor, started 140112537040640)>']
[2025-11-21 08:29:49] 2025-11-21 13:29:44,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 08:29:49] 2025-11-21 13:29:44,837 | INFO     | [monitor] control thread has ended
[2025-11-21 08:29:49] 2025-11-21 13:29:49,506 | INFO     | all workflow threads have been joined
[2025-11-21 08:29:49] 2025-11-21 13:29:49,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 08:29:49] 2025-11-21 13:29:49,507 | INFO     | traces error code: 0
[2025-11-21 08:29:49] 2025-11-21 13:29:49,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 08:29:49] 2025-11-21 13:29:49,632 [wrapper] ==== pilot stdout END ====
[2025-11-21 08:29:49] 2025-11-21 13:29:49,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 08:29:49] 2025-11-21 13:29:49,636 [wrapper] pilotpid: 3328708
[2025-11-21 08:29:49] 2025-11-21 13:29:49,639 [wrapper] Pilot exit status: 0
[2025-11-21 08:29:49] 2025-11-21 13:29:49,647 [wrapper] pandaids: 6893852883
[2025-11-21 08:29:49] 2025-11-21 13:29:49,692 [wrapper] cleanup supervisor_pilot 4143067 3328709
[2025-11-21 08:29:49] 2025-11-21 13:29:49,695 [wrapper] Test setup, not cleaning
[2025-11-21 08:29:49] 2025-11-21 13:29:49,697 [wrapper] apfmon messages muted
[2025-11-21 08:29:49] 2025-11-21 13:29:49,699 [wrapper] ==== wrapper stdout END ====
[2025-11-21 08:29:49] 2025-11-21 13:29:49,702 [wrapper] ==== wrapper stderr END ====
[2025-11-21 08:29:49]  *** Error codes and diagnostics ***
[2025-11-21 08:29:49]     "exeErrorCode": 0,
[2025-11-21 08:29:49]     "exeErrorDiag": "",
[2025-11-21 08:29:49]     "pilotErrorCode": 0,
[2025-11-21 08:29:49]     "pilotErrorDiag": "",
[2025-11-21 08:29:49]  *** Listing of results directory ***
[2025-11-21 08:29:49] total 1295652
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 07:07 pilot3.tar.gz
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 07:09 queuedata.json
[2025-11-21 08:29:49] -rwx------. 1 boincer umatlas     36292 Nov 20 07:11 runpilot2-wrapper.sh
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas       100 Nov 20 22:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 08:29:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 22:54 run_atlas
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas       105 Nov 20 22:54 job.xml
[2025-11-21 08:29:49] -rw-r--r--. 2 boincer umatlas 407759065 Nov 20 22:54 EVNT.47493127._000405.pool.root.1
[2025-11-21 08:29:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 22:54 shared
[2025-11-21 08:29:49] -rw-r--r--. 2 boincer umatlas    590099 Nov 20 22:54 input.tar.gz
[2025-11-21 08:29:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 22:54 start_atlas.sh
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas         0 Nov 20 22:54 boinc_lockfile
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas      2785 Nov 20 22:54 pandaJob.out
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas        57 Nov 20 22:54 setup.sh.local
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas    989817 Nov 20 22:54 agis_schedconf.cvmfs.json
[2025-11-21 08:29:49] drwx------. 5 boincer umatlas      4096 Nov 20 22:54 pilot3
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas       533 Nov 21 08:16 boinc_task_state.xml
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas      6663 Nov 21 08:18 init_data.xml
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas 901384853 Nov 21 08:28 HITS.47523449._004047.pool.root.1
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas      1051 Nov 21 08:28 memory_monitor_summary.json
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas   1526164 Nov 21 08:28 agis_ddmendpoints.agis.ALL.json
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas   1956404 Nov 21 08:28 log.47523449._004047.job.log.tgz.1
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas      8621 Nov 21 08:28 heartbeat.json
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas        95 Nov 21 08:29 pilot_heartbeat.json
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas        29 Nov 21 08:29 wrapper_checkpoint.txt
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 08:29 boinc_mmap_file
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas      4823 Nov 21 08:29 pilotlog.txt
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas   4880359 Nov 21 08:29 log.47523449._004047.job.log.1
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas       353 Nov 21 08:29 output.list
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas       620 Nov 21 08:29 runtime_log
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas   6860800 Nov 21 08:29 result.tar.gz
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 08:29 runtime_log.err
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas       661 Nov 21 08:29 iuqMDmWgIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJjHKDmUQTORo.diag
[2025-11-21 08:29:49] -rw-r--r--. 1 boincer umatlas     21095 Nov 21 08:29 stderr.txt
[2025-11-21 08:29:49] HITS file was successfully produced:
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas 901384853 Nov 21 08:28 shared/HITS.pool.root.1
[2025-11-21 08:29:49]  *** Contents of shared directory: ***
[2025-11-21 08:29:49] total 1285768
[2025-11-21 08:29:49] -rw-r--r--. 2 boincer umatlas 407759065 Nov 20 22:54 ATLAS.root_0
[2025-11-21 08:29:49] -rw-r--r--. 2 boincer umatlas    590099 Nov 20 22:54 input.tar.gz
[2025-11-21 08:29:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 22:54 start_atlas.sh
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas 901384853 Nov 21 08:28 HITS.pool.root.1
[2025-11-21 08:29:49] -rw-------. 1 boincer umatlas   6860800 Nov 21 08:29 result.tar.gz
08:29:51 (3324612): run_atlas exited; CPU time 280853.822811
08:29:51 (3324612): called boinc_finish(0)

</stderr_txt>
]]>

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