Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:05:59 (3637583): wrapper (7.7.26015): starting
12:05:59 (3637583): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 12:05:59] Arguments: --nthreads 4
[2025-11-22 12:05:59] Threads: 4
[2025-11-22 12:05:59] Checking for CVMFS
[2025-11-22 12:05:59] No cvmfs_config command found, will try listing directly
[2025-11-22 12:05:59] CVMFS is ok
[2025-11-22 12:05:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 12:05:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 12:05:59] Further information can be found at the LHC@home message board.
[2025-11-22 12:05:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 12:05:59] Checking for apptainer binary...
[2025-11-22 12:05:59] which: no apptainer in ((null))
[2025-11-22 12:05:59] apptainer is not installed, using version from CVMFS
[2025-11-22 12:05:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 12:05:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-11-22 12:05:59] apptainer works
[2025-11-22 12:05:59] Set ATHENA_PROC_NUMBER=4
[2025-11-22 12:05:59] Set ATHENA_CORE_NUMBER=4
[2025-11-22 12:05:59] Starting ATLAS job with PandaID=6893871888
[2025-11-22 12:05:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:42:55]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:42:55] 2025-11-23 02:17:46,127 | INFO     | monitor loop #3700: job 0:6893871888 is in state 'finished'
[2025-11-23 03:42:55] 2025-11-23 02:17:46,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:42:55] 2025-11-23 02:17:46,858 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 03:42:55] 2025-11-23 02:17:46,879 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2744.2312265625
[2025-11-23 03:42:55] 2025-11-23 02:17:46,904 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6893871888/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 03:42:55] 2025-11-23 02:17:46,905 | INFO     | extracted standard info from prmon json
[2025-11-23 03:42:55] 2025-11-23 02:17:46,905 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:42:55] 2025-11-23 02:17:46,905 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:42:55] 2025-11-23 02:17:46,920 | INFO     | fitting pss+swap vs Time
[2025-11-23 03:42:55] 2025-11-23 02:17:46,921 | INFO     | sum of square deviations: 223049849815.99905
[2025-11-23 03:42:55] 2025-11-23 02:17:46,940 | INFO     | sum of deviations: 664259401247.5773
[2025-11-23 03:42:55] 2025-11-23 02:17:46,940 | INFO     | mean x: 1763836904.501116
[2025-11-23 03:42:55] 2025-11-23 02:17:46,940 | INFO     | mean y: 2267442.9229910714
[2025-11-23 03:42:55] 2025-11-23 02:17:46,940 | INFO     | intersect: -5250572884.245214
[2025-11-23 03:42:55] 2025-11-23 02:17:46,941 | INFO     | chi2: 3.942880315563314
[2025-11-23 03:42:55] 2025-11-23 02:17:46,942 | INFO     | sum of square deviations: 219336552590.9988
[2025-11-23 03:42:55] 2025-11-23 02:17:46,961 | INFO     | sum of deviations: 825970412517.1587
[2025-11-23 03:42:55] 2025-11-23 02:17:46,961 | INFO     | mean x: 1763836752.0011222
[2025-11-23 03:42:55] 2025-11-23 02:17:46,961 | INFO     | mean y: 2274076.8417508416
[2025-11-23 03:42:55] 2025-11-23 02:17:46,961 | INFO     | intersect: -6639924646.778929
[2025-11-23 03:42:55] 2025-11-23 02:17:46,962 | INFO     | chi2: 2.1749228604017508
[2025-11-23 03:42:55] 2025-11-23 02:17:46,962 | INFO     | current chi2=2.1749228604017508 (change=44.83923714810952 %)
[2025-11-23 03:42:55] 2025-11-23 02:17:46,963 | INFO     | sum of square deviations: 215664698003.49866
[2025-11-23 03:42:55] 2025-11-23 02:17:46,981 | INFO     | sum of deviations: 873905132087.3513
[2025-11-23 03:42:55] 2025-11-23 02:17:46,981 | INFO     | mean x: 1763836599.5011287
[2025-11-23 03:42:55] 2025-11-23 02:17:46,981 | INFO     | mean y: 2276064.1478555305
[2025-11-23 03:42:55] 2025-11-23 02:17:46,982 | INFO     | intersect: -7145049718.593519
[2025-11-23 03:42:55] 2025-11-23 02:17:46,982 | INFO     | chi2: 1.9473113948202656
[2025-11-23 03:42:55] 2025-11-23 02:17:46,983 | INFO     | current chi2=1.9473113948202656 (change=10.465266135436217 %)
[2025-11-23 03:42:55] 2025-11-23 02:17:46,983 | INFO     | right removable region: 885
[2025-11-23 03:42:55] 2025-11-23 02:17:46,984 | INFO     | sum of square deviations: 219336551980.9988
[2025-11-23 03:42:55] 2025-11-23 02:17:47,002 | INFO     | sum of deviations: 500917317839.567
[2025-11-23 03:42:55] 2025-11-23 02:17:47,003 | INFO     | mean x: 1763837057.0011222
[2025-11-23 03:42:55] 2025-11-23 02:17:47,003 | INFO     | mean y: 2274138.4332211
[2025-11-23 03:42:55] 2025-11-23 02:17:47,003 | INFO     | intersect: -4025948789.8435884
[2025-11-23 03:42:55] 2025-11-23 02:17:47,004 | INFO     | chi2: 2.0925754789038837
[2025-11-23 03:42:55] 2025-11-23 02:17:47,004 | INFO     | current chi2=2.0925754789038837 (change=46.927745418898915 %)
[2025-11-23 03:42:55] 2025-11-23 02:17:47,005 | INFO     | sum of square deviations: 215664696783.49866
[2025-11-23 03:42:55] 2025-11-23 02:17:47,023 | INFO     | sum of deviations: 470475924795.8169
[2025-11-23 03:42:55] 2025-11-23 02:17:47,023 | INFO     | mean x: 1763837209.5011287
[2025-11-23 03:42:55] 2025-11-23 02:17:47,023 | INFO     | mean y: 2275402.682844244
[2025-11-23 03:42:55] 2025-11-23 02:17:47,023 | INFO     | intersect: -3845563185.207963
[2025-11-23 03:42:55] 2025-11-23 02:17:47,024 | INFO     | chi2: 2.0684080123114086
[2025-11-23 03:42:55] 2025-11-23 02:17:47,024 | INFO     | current chi2=2.0684080123114086 (change=1.1549149283319693 %)
[2025-11-23 03:42:55] 2025-11-23 02:17:47,024 | INFO     | left removable region: 20
[2025-11-23 03:42:55] 2025-11-23 02:17:47,025 | INFO     | sum of square deviations: 200690211426.99872
[2025-11-23 03:42:55] 2025-11-23 02:17:47,043 | INFO     | sum of deviations: 632088966946.1387
[2025-11-23 03:42:55] 2025-11-23 02:17:47,043 | INFO     | mean x: 1763837179.001156
[2025-11-23 03:42:55] 2025-11-23 02:17:47,043 | INFO     | mean y: 2286131.8624277455
[2025-11-23 03:42:55] 2025-11-23 02:17:47,043 | INFO     | intersect: -5553052179.899624
[2025-11-23 03:42:55] 2025-11-23 02:17:47,044 | INFO     | chi2: 0.04993450237144344
[2025-11-23 03:42:55] 2025-11-23 02:17:47,044 | INFO     | current memory leak: 3.15 B/s (using 865 data points, chi2=0.05)
[2025-11-23 03:42:55] 2025-11-23 02:17:47,045 | INFO     | could have reported an average CPU frequency of 2710 MHz (34 samples)
[2025-11-23 03:42:55] 2025-11-23 02:17:47,045 | INFO     | ..............................
[2025-11-23 03:42:55] 2025-11-23 02:17:47,045 | INFO     | . Timing measurements:
[2025-11-23 03:42:55] 2025-11-23 02:17:47,045 | INFO     | . get job = 0 s
[2025-11-23 03:42:55] 2025-11-23 02:17:47,046 | INFO     | . initial setup = 1 s
[2025-11-23 03:42:55] 2025-11-23 02:17:47,046 | INFO     | . payload setup = 8 s
[2025-11-23 03:42:55] 2025-11-23 02:17:47,046 | INFO     | . stage-in = 0 s
[2025-11-23 03:42:55] 2025-11-23 02:17:47,046 | INFO     | . payload execution = 54651 s
[2025-11-23 03:42:55] 2025-11-23 02:17:47,046 | INFO     | . stage-out = 3 s
[2025-11-23 03:42:55] 2025-11-23 02:17:47,046 | INFO     | . log creation = 0 s
[2025-11-23 03:42:55] 2025-11-23 02:17:47,046 | INFO     | ..............................
[2025-11-23 03:42:55] 2025-11-23 02:17:47,143 | INFO     | 
[2025-11-23 03:42:55] 2025-11-23 02:17:47,143 | INFO     | job summary report
[2025-11-23 03:42:55] 2025-11-23 02:17:47,143 | INFO     | --------------------------------------------------
[2025-11-23 03:42:55] 2025-11-23 02:17:47,143 | INFO     | PanDA job id: 6893871888
[2025-11-23 03:42:55] 2025-11-23 02:17:47,143 | INFO     | task id: 47523449
[2025-11-23 03:42:55] 2025-11-23 02:17:47,143 | INFO     | errors: (none)
[2025-11-23 03:42:55] 2025-11-23 02:17:47,143 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:42:55] 2025-11-23 02:17:47,143 | INFO     | pilot state: finished 
[2025-11-23 03:42:55] 2025-11-23 02:17:47,143 | INFO     | transexitcode: 0
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | exeerrorcode: 0
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | exeerrordiag: 
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | exitcode: 0
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | exitmsg: OK
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | cpuconsumptiontime: 215999 s
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | nevents: 1000
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | neventsw: 0
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | pid: 3649090
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | pgrp: 3649090
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | corecount: 4
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | event service: False
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | sizes: {0: 2298647, 1: 2298846, 8: 2299108, 12: 2299136, 54663: 2351676, 54667: 2360694, 54669: 2360878, 54675: 2361124}
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | --------------------------------------------------
[2025-11-23 03:42:55] 2025-11-23 02:17:47,144 | INFO     | 
[2025-11-23 03:42:55] 2025-11-23 02:17:47,145 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-11-23 03:42:55] 2025-11-23 02:17:47,173 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,173 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,173 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,173 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,175 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:42:55] 2025-11-23 02:17:47,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,175 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:42:55] 2025-11-23 02:17:47,175 | INFO     | job 6893871888 has completed (purged errors)
[2025-11-23 03:42:55] 2025-11-23 02:17:47,175 | INFO     | overall cleanup function is called
[2025-11-23 03:42:55] 2025-11-23 02:17:48,192 | INFO     | --- collectZombieJob: --- 10, [3649090]
[2025-11-23 03:42:55] 2025-11-23 02:17:48,192 | INFO     | zombie collector waiting for pid 3649090
[2025-11-23 03:42:55] 2025-11-23 02:17:48,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:42:55] 2025-11-23 02:17:48,192 | INFO     | collected zombie processes
[2025-11-23 03:42:55] 2025-11-23 02:17:48,192 | INFO     | will attempt to kill all subprocesses of pid=3649090
[2025-11-23 03:42:55] 2025-11-23 02:17:48,933 | INFO     | process IDs to be killed: [3649090] (in reverse order)
[2025-11-23 03:42:55] 2025-11-23 02:17:49,169 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:42:55] 2025-11-23 02:17:49,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:42:55] 2025-11-23 02:17:49,199 | INFO     | did not find any defunct processes belonging to 3649090
[2025-11-23 03:42:55] 2025-11-23 02:17:49,227 | INFO     | did not find any defunct processes belonging to 3649090
[2025-11-23 03:42:55] 2025-11-23 02:17:49,228 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:42:55] 2025-11-23 02:17:49,229 | INFO     | ready for new job
[2025-11-23 03:42:55] 2025-11-23 02:17:49,229 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:42:55] 2025-11-23 02:17:49,235 | INFO     | ***************************************
[2025-11-23 03:42:55] 2025-11-23 02:17:49,235 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:42:55] 2025-11-23 02:17:49,235 | INFO     | ***************************************
[2025-11-23 03:42:55] 2025-11-23 02:17:49,235 | INFO     | 
[2025-11-23 03:42:55] 2025-11-23 02:17:49,243 | INFO     | architecture information:
[2025-11-23 03:42:55] 2025-11-23 02:17:49,244 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:42:55] 2025-11-23 02:17:49,261 | INFO     | cat /etc/os-release:
[2025-11-23 03:42:55] NAME="CentOS Linux"
[2025-11-23 03:42:55] VERSION="7 (Core)"
[2025-11-23 03:42:55] ID="centos"
[2025-11-23 03:42:55] ID_LIKE="rhel fedora"
[2025-11-23 03:42:55] VERSION_ID="7"
[2025-11-23 03:42:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:42:55] ANSI_COLOR="0;31"
[2025-11-23 03:42:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:42:55] HOME_URL="https://www.centos.org/"
[2025-11-23 03:42:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:42:55] 
[2025-11-23 03:42:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:42:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:42:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:42:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:42:55] 
[2025-11-23 03:42:55] 2025-11-23 02:17:49,262 | INFO     | ***************************************
[2025-11-23 03:42:55] 2025-11-23 02:17:49,764 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-11-23 03:42:55] 2025-11-23 02:17:49,786 | INFO     | sufficient remaining disk space (3327680053248 B)
[2025-11-23 03:42:55] 2025-11-23 02:17:49,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:42:55] 2025-11-23 02:17:49,786 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:42:55] 2025-11-23 02:17:49,786 | INFO     | update_server=False
[2025-11-23 03:42:55] 2025-11-23 02:17:49,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:42:55] 2025-11-23 02:17:49,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:42:55] 2025-11-23 02:17:49,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:42:55] 2025-11-23 02:17:49,787 | INFO     | aborting loop
[2025-11-23 03:42:55] 2025-11-23 02:17:50,089 | INFO     | all payload control threads have been joined
[2025-11-23 03:42:55] 2025-11-23 02:17:50,386 | INFO     | all job control threads have been joined
[2025-11-23 03:42:55] 2025-11-23 02:17:50,580 | INFO     | all data control threads have been joined
[2025-11-23 03:42:55] 2025-11-23 02:17:50,790 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:50,792 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:50,946 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:50,964 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:51,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:42:55] 2025-11-23 02:17:51,094 | INFO     | [payload] control thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:51,392 | INFO     | [job] control thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:51,467 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:51,477 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:51,586 | INFO     | [data] control thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:51,793 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:51,915 | INFO     | [job] validate thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:51,980 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:52,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:42:55] 2025-11-23 02:17:52,260 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:53,158 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:17:55,052 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:18:00,637 | INFO     | job.realtimelogging is not enabled
[2025-11-23 03:42:55] 2025-11-23 02:18:01,641 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:42:55] 2025-11-23 02:18:19,863 | INFO     | PID=3641702 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 03:42:55] 2025-11-23 02:18:19,864 | INFO     | .. there are 9 such processes running
[2025-11-23 03:42:55] 2025-11-23 02:18:19,864 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:42:55] 2025-11-23 02:18:19,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:42:55] 2025-11-23 02:18:19,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:42:55] 2025-11-23 02:18:43,229 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:42:55] 2025-11-23 02:18:44,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22669036025664)>', '<ExcThread(monitor, started 22668797507328)>']
[2025-11-23 03:42:55] 2025-11-23 02:18:44,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:42:55] 2025-11-23 02:18:44,989 | INFO     | [monitor] control thread has ended
[2025-11-23 03:42:55] 2025-11-23 02:18:49,734 | INFO     | all workflow threads have been joined
[2025-11-23 03:42:55] 2025-11-23 02:18:49,737 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:42:55] 2025-11-23 02:18:49,738 | INFO     | traces error code: 0
[2025-11-23 03:42:55] 2025-11-23 02:18:49,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:42:55] 2025-11-23 02:18:49,877 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:42:55] 2025-11-23 02:18:49,881 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:42:55] 2025-11-23 02:18:49,885 [wrapper] pilotpid: 3641702
[2025-11-23 03:42:55] 2025-11-23 02:18:49,889 [wrapper] Pilot exit status: 0
[2025-11-23 03:42:55] 2025-11-23 02:18:49,903 [wrapper] pandaids: 6893871888
[2025-11-23 03:42:55] 2025-11-23 02:18:50,057 [wrapper] cleanup supervisor_pilot  816128 3641703
[2025-11-23 03:42:55] 2025-11-23 02:18:50,061 [wrapper] Test setup, not cleaning
[2025-11-23 03:42:55] 2025-11-23 02:18:50,064 [wrapper] apfmon messages muted
[2025-11-23 03:42:55] 2025-11-23 02:18:50,068 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:42:55] 2025-11-23 02:18:50,072 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:42:55]  *** Error codes and diagnostics ***
[2025-11-23 03:42:55]     "exeErrorCode": 0,
[2025-11-23 03:42:55]     "exeErrorDiag": "",
[2025-11-23 03:42:55]     "pilotErrorCode": 0,
[2025-11-23 03:42:55]     "pilotErrorDiag": "",
[2025-11-23 03:42:55]  *** Listing of results directory ***
[2025-11-23 03:42:55] total 1317772
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:50 pilot3.tar.gz
[2025-11-23 03:42:55] -rwx------ 1 boinc boinc     36292 Nov 20 16:06 runpilot2-wrapper.sh
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc      5112 Nov 20 16:07 queuedata.json
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc       100 Nov 22 12:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:42:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 12:05 run_atlas
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc       105 Nov 22 12:05 job.xml
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc      6687 Nov 22 12:05 init_data.xml
[2025-11-23 03:42:55] -rw-r--r-- 2 boinc boinc 409650587 Nov 22 12:05 EVNT.47493127._000669.pool.root.1
[2025-11-23 03:42:55] -rw-r--r-- 2 boinc boinc     15847 Nov 22 12:05 start_atlas.sh
[2025-11-23 03:42:55] drwxrwx--x 2 boinc boinc      4096 Nov 22 12:05 shared
[2025-11-23 03:42:55] -rw-r--r-- 2 boinc boinc    590101 Nov 22 12:05 input.tar.gz
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc         0 Nov 22 12:05 boinc_lockfile
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc      2785 Nov 22 12:05 pandaJob.out
[2025-11-23 03:42:55] -rw------- 1 boinc boinc    989768 Nov 22 12:06 agis_schedconf.cvmfs.json
[2025-11-23 03:42:55] drwx------ 5 boinc boinc      4096 Nov 22 12:06 pilot3
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc       532 Nov 23 03:08 boinc_task_state.xml
[2025-11-23 03:42:55] -rw------- 1 boinc boinc 917357816 Nov 23 03:17 HITS.47523449._006688.pool.root.1
[2025-11-23 03:42:55] -rw------- 1 boinc boinc      1041 Nov 23 03:17 memory_monitor_summary.json
[2025-11-23 03:42:55] -rw------- 1 boinc boinc        95 Nov 23 03:17 pilot_heartbeat.json
[2025-11-23 03:42:55] -rw------- 1 boinc boinc   1526164 Nov 23 03:17 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:42:55] -rw------- 1 boinc boinc   1651644 Nov 23 03:17 log.47523449._006688.job.log.tgz.1
[2025-11-23 03:42:55] -rw------- 1 boinc boinc      8606 Nov 23 03:17 heartbeat.json
[2025-11-23 03:42:55] -rw------- 1 boinc boinc      4907 Nov 23 03:18 pilotlog.txt
[2025-11-23 03:42:55] -rw------- 1 boinc boinc   7581029 Nov 23 03:18 log.47523449._006688.job.log.1
[2025-11-23 03:42:55] -rw------- 1 boinc boinc       353 Nov 23 03:18 output.list
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc       620 Nov 23 03:18 runtime_log
[2025-11-23 03:42:55] -rw------- 1 boinc boinc   9256960 Nov 23 03:18 result.tar.gz
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc      9223 Nov 23 03:18 runtime_log.err
[2025-11-23 03:42:55] -rw------- 1 boinc boinc       670 Nov 23 03:18 AfoNDmXQLg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8pGKDmreVM6n.diag
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc        28 Nov 23 03:42 wrapper_checkpoint.txt
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc      8192 Nov 23 03:42 boinc_mmap_file
[2025-11-23 03:42:55] -rw-r--r-- 1 boinc boinc     21100 Nov 23 03:42 stderr.txt
[2025-11-23 03:42:55] HITS file was successfully produced:
[2025-11-23 03:42:55] -rw------- 1 boinc boinc 917357816 Nov 23 03:17 shared/HITS.pool.root.1
[2025-11-23 03:42:55]  *** Contents of shared directory: ***
[2025-11-23 03:42:55] total 1305552
[2025-11-23 03:42:55] -rw-r--r-- 2 boinc boinc 409650587 Nov 22 12:05 ATLAS.root_0
[2025-11-23 03:42:55] -rw-r--r-- 2 boinc boinc     15847 Nov 22 12:05 start_atlas.sh
[2025-11-23 03:42:55] -rw-r--r-- 2 boinc boinc    590101 Nov 22 12:05 input.tar.gz
[2025-11-23 03:42:55] -rw------- 1 boinc boinc 917357816 Nov 23 03:17 HITS.pool.root.1
[2025-11-23 03:42:55] -rw------- 1 boinc boinc   9256960 Nov 23 03:18 result.tar.gz
03:42:56 (3637583): run_atlas exited; CPU time 218782.313754
03:42:56 (3637583): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN