Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:56:02 (742): wrapper (7.7.26015): starting
20:56:02 (742): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 20:56:02] Arguments: --nthreads 8
[2025-11-20 20:56:02] Threads: 8
[2025-11-20 20:56:02] Checking for CVMFS
[2025-11-20 20:56:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:56:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:56:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:56:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:56:03] 2.11.2.0 2857 59804 87488 153103 1 82 19820072 20275201 1 130560 0 15405770 99.835 3516905 29189 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 20:56:03] CVMFS is ok
[2025-11-20 20:56:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 20:56:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 20:56:03] Further information can be found at the LHC@home message board.
[2025-11-20 20:56:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:56:03] Checking for apptainer binary...
[2025-11-20 20:56:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:56:03] Running /usr/bin/apptainer --version
[2025-11-20 20:56:03] apptainer version 1.3.2-1.el7
[2025-11-20 20:56:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:56:04] c-204-10.aglt2.org
[2025-11-20 20:56:04] apptainer works
[2025-11-20 20:56:04] Set ATHENA_PROC_NUMBER=8
[2025-11-20 20:56:04] Set ATHENA_CORE_NUMBER=8
[2025-11-20 20:56:04] Starting ATLAS job with PandaID=6893871872
[2025-11-20 20:56:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 09:34:43]  *** The last 200 lines of the pilot log: ***
[2025-11-21 09:34:43] 2025-11-21 14:33:48,077 | INFO     | time since job start (45446s) is within the limit (172800.0s)
[2025-11-21 09:34:43] 2025-11-21 14:33:48,432 | INFO     | monitor loop #3346: job 0:6893871872 is in state 'finished'
[2025-11-21 09:34:43] 2025-11-21 14:33:48,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,083 | INFO     | time since job start (45448s) is within the limit (172800.0s)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,397 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 09:34:43] 2025-11-21 14:33:50,400 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1662.5
[2025-11-21 09:34:43] 2025-11-21 14:33:50,402 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893871872/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,403 | INFO     | extracted standard info from prmon json
[2025-11-21 09:34:43] 2025-11-21 14:33:50,403 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 09:34:43] 2025-11-21 14:33:50,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 09:34:43] 2025-11-21 14:33:50,415 | INFO     | fitting pss+swap vs Time
[2025-11-21 09:34:43] 2025-11-21 14:33:50,416 | INFO     | sum of square deviations: 128216824460.07138
[2025-11-21 09:34:43] 2025-11-21 14:33:50,428 | INFO     | sum of deviations: 852204098650.1823
[2025-11-21 09:34:43] 2025-11-21 14:33:50,428 | INFO     | mean x: 1763712907.5154362
[2025-11-21 09:34:43] 2025-11-21 14:33:50,428 | INFO     | mean y: 2865512.853691275
[2025-11-21 09:34:43] 2025-11-21 14:33:50,428 | INFO     | intersect: -11719803294.116758
[2025-11-21 09:34:43] 2025-11-21 14:33:50,429 | INFO     | chi2: 6.071651533886647
[2025-11-21 09:34:43] 2025-11-21 14:33:50,430 | INFO     | sum of square deviations: 125652670243.73428
[2025-11-21 09:34:43] 2025-11-21 14:33:50,441 | INFO     | sum of deviations: 1121467989810.0322
[2025-11-21 09:34:43] 2025-11-21 14:33:50,441 | INFO     | mean x: 1763712755.018919
[2025-11-21 09:34:43] 2025-11-21 14:33:50,442 | INFO     | mean y: 2881529.1405405407
[2025-11-21 09:34:43] 2025-11-21 14:33:50,442 | INFO     | intersect: -15738506171.86625
[2025-11-21 09:34:43] 2025-11-21 14:33:50,442 | INFO     | chi2: 2.4488977407829937
[2025-11-21 09:34:43] 2025-11-21 14:33:50,443 | INFO     | current chi2=2.4488977407829937 (change=59.666694850397974 %)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,443 | INFO     | sum of square deviations: 123122935277.37933
[2025-11-21 09:34:43] 2025-11-21 14:33:50,454 | INFO     | sum of deviations: 1158151390832.8008
[2025-11-21 09:34:43] 2025-11-21 14:33:50,455 | INFO     | mean x: 1763712602.522449
[2025-11-21 09:34:43] 2025-11-21 14:33:50,455 | INFO     | mean y: 2883732.466666667
[2025-11-21 09:34:43] 2025-11-21 14:33:50,455 | INFO     | intersect: -16587414403.610964
[2025-11-21 09:34:43] 2025-11-21 14:33:50,456 | INFO     | chi2: 2.245930973057107
[2025-11-21 09:34:43] 2025-11-21 14:33:50,456 | INFO     | current chi2=2.245930973057107 (change=8.288086690830612 %)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,456 | INFO     | right removable region: 734
[2025-11-21 09:34:43] 2025-11-21 14:33:50,457 | INFO     | sum of square deviations: 125652436003.73442
[2025-11-21 09:34:43] 2025-11-21 14:33:50,468 | INFO     | sum of deviations: 656057317662.9023
[2025-11-21 09:34:43] 2025-11-21 14:33:50,468 | INFO     | mean x: 1763713060.018919
[2025-11-21 09:34:43] 2025-11-21 14:33:50,468 | INFO     | mean y: 2877158.5783783784
[2025-11-21 09:34:43] 2025-11-21 14:33:50,469 | INFO     | intersect: -9205832963.43352
[2025-11-21 09:34:43] 2025-11-21 14:33:50,469 | INFO     | chi2: 4.006735733351333
[2025-11-21 09:34:43] 2025-11-21 14:33:50,469 | INFO     | current chi2=4.006735733351333 (change=34.009128966159544 %)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,470 | INFO     | sum of square deviations: 123122556833.4639
[2025-11-21 09:34:43] 2025-11-21 14:33:50,481 | INFO     | sum of deviations: 613768816279.5676
[2025-11-21 09:34:43] 2025-11-21 14:33:50,481 | INFO     | mean x: 1763713212.519728
[2025-11-21 09:34:43] 2025-11-21 14:33:50,482 | INFO     | mean y: 2879706.236734694
[2025-11-21 09:34:43] 2025-11-21 14:33:50,482 | INFO     | intersect: -8789271777.175665
[2025-11-21 09:34:43] 2025-11-21 14:33:50,482 | INFO     | chi2: 3.969612592621367
[2025-11-21 09:34:43] 2025-11-21 14:33:50,483 | INFO     | current chi2=3.969612592621367 (change=0.9265183231566877 %)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,483 | INFO     | left removable region: 20
[2025-11-21 09:34:43] 2025-11-21 14:33:50,484 | INFO     | sum of square deviations: 112867854727.19331
[2025-11-21 09:34:43] 2025-11-21 14:33:50,494 | INFO     | sum of deviations: 872530968841.4111
[2025-11-21 09:34:43] 2025-11-21 14:33:50,494 | INFO     | mean x: 1763713182.0336134
[2025-11-21 09:34:43] 2025-11-21 14:33:50,494 | INFO     | mean y: 2901457.274509804
[2025-11-21 09:34:43] 2025-11-21 14:33:50,495 | INFO     | intersect: -13631577333.854586
[2025-11-21 09:34:43] 2025-11-21 14:33:50,495 | INFO     | chi2: 0.10810805679637958
[2025-11-21 09:34:43] 2025-11-21 14:33:50,495 | INFO     | current memory leak: 7.73 B/s (using 714 data points, chi2=0.11)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,496 | INFO     | could have reported an average CPU frequency of 2168 MHz (28 samples)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,496 | INFO     | ..............................
[2025-11-21 09:34:43] 2025-11-21 14:33:50,496 | INFO     | . Timing measurements:
[2025-11-21 09:34:43] 2025-11-21 14:33:50,496 | INFO     | . get job = 0 s
[2025-11-21 09:34:43] 2025-11-21 14:33:50,497 | INFO     | . initial setup = 2 s
[2025-11-21 09:34:43] 2025-11-21 14:33:50,497 | INFO     | . payload setup = 9 s
[2025-11-21 09:34:43] 2025-11-21 14:33:50,497 | INFO     | . stage-in = 0 s
[2025-11-21 09:34:43] 2025-11-21 14:33:50,497 | INFO     | . payload execution = 45404 s
[2025-11-21 09:34:43] 2025-11-21 14:33:50,497 | INFO     | . stage-out = 3 s
[2025-11-21 09:34:43] 2025-11-21 14:33:50,497 | INFO     | . log creation = 0 s
[2025-11-21 09:34:43] 2025-11-21 14:33:50,497 | INFO     | ..............................
[2025-11-21 09:34:43] 2025-11-21 14:33:50,693 | INFO     | 
[2025-11-21 09:34:43] 2025-11-21 14:33:50,693 | INFO     | job summary report
[2025-11-21 09:34:43] 2025-11-21 14:33:50,694 | INFO     | --------------------------------------------------
[2025-11-21 09:34:43] 2025-11-21 14:33:50,694 | INFO     | PanDA job id: 6893871872
[2025-11-21 09:34:43] 2025-11-21 14:33:50,694 | INFO     | task id: 47523449
[2025-11-21 09:34:43] 2025-11-21 14:33:50,694 | INFO     | errors: (none)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 09:34:43] 2025-11-21 14:33:50,694 | INFO     | pilot state: finished 
[2025-11-21 09:34:43] 2025-11-21 14:33:50,694 | INFO     | transexitcode: 0
[2025-11-21 09:34:43] 2025-11-21 14:33:50,694 | INFO     | exeerrorcode: 0
[2025-11-21 09:34:43] 2025-11-21 14:33:50,694 | INFO     | exeerrordiag: 
[2025-11-21 09:34:43] 2025-11-21 14:33:50,695 | INFO     | exitcode: 0
[2025-11-21 09:34:43] 2025-11-21 14:33:50,695 | INFO     | exitmsg: OK
[2025-11-21 09:34:43] 2025-11-21 14:33:50,695 | INFO     | cpuconsumptiontime: 352150 s
[2025-11-21 09:34:43] 2025-11-21 14:33:50,695 | INFO     | nevents: 1000
[2025-11-21 09:34:43] 2025-11-21 14:33:50,695 | INFO     | neventsw: 0
[2025-11-21 09:34:43] 2025-11-21 14:33:50,695 | INFO     | pid: 10984
[2025-11-21 09:34:43] 2025-11-21 14:33:50,695 | INFO     | pgrp: 10984
[2025-11-21 09:34:43] 2025-11-21 14:33:50,695 | INFO     | corecount: 8
[2025-11-21 09:34:43] 2025-11-21 14:33:50,696 | INFO     | event service: False
[2025-11-21 09:34:43] 2025-11-21 14:33:50,696 | INFO     | sizes: {0: 2298806, 6: 2299068, 11: 2299096, 45417: 2345219, 45418: 2345218, 45423: 2354452, 45431: 2354642}
[2025-11-21 09:34:43] 2025-11-21 14:33:50,696 | INFO     | --------------------------------------------------
[2025-11-21 09:34:43] 2025-11-21 14:33:50,696 | INFO     | 
[2025-11-21 09:34:43] 2025-11-21 14:33:50,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 09:34:43] 2025-11-21 14:33:50,726 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,726 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,726 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,726 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,729 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,729 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 09:34:43] 2025-11-21 14:33:50,729 | INFO     | job 6893871872 has completed (purged errors)
[2025-11-21 09:34:43] 2025-11-21 14:33:50,730 | INFO     | overall cleanup function is called
[2025-11-21 09:34:43] 2025-11-21 14:33:51,746 | INFO     | --- collectZombieJob: --- 10, [10984]
[2025-11-21 09:34:43] 2025-11-21 14:33:51,746 | INFO     | zombie collector waiting for pid 10984
[2025-11-21 09:34:43] 2025-11-21 14:33:51,746 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 09:34:43] 2025-11-21 14:33:51,747 | INFO     | collected zombie processes
[2025-11-21 09:34:43] 2025-11-21 14:33:51,747 | INFO     | will attempt to kill all subprocesses of pid=10984
[2025-11-21 09:34:43] 2025-11-21 14:33:51,837 | INFO     | process IDs to be killed: [10984] (in reverse order)
[2025-11-21 09:34:43] 2025-11-21 14:33:51,898 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 09:34:43] 2025-11-21 14:33:51,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 09:34:43] 2025-11-21 14:33:51,901 | INFO     | did not find any defunct processes belonging to 10984
[2025-11-21 09:34:43] 2025-11-21 14:33:51,904 | INFO     | did not find any defunct processes belonging to 10984
[2025-11-21 09:34:43] 2025-11-21 14:33:51,907 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 09:34:43] 2025-11-21 14:33:51,907 | INFO     | ready for new job
[2025-11-21 09:34:43] 2025-11-21 14:33:51,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 09:34:43] 2025-11-21 14:33:51,911 | INFO     | ***************************************
[2025-11-21 09:34:43] 2025-11-21 14:33:51,911 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 09:34:43] 2025-11-21 14:33:51,911 | INFO     | ***************************************
[2025-11-21 09:34:43] 2025-11-21 14:33:51,911 | INFO     | 
[2025-11-21 09:34:43] 2025-11-21 14:33:51,912 | INFO     | architecture information:
[2025-11-21 09:34:43] 2025-11-21 14:33:51,913 | INFO     | executing command: cat /etc/os-release
[2025-11-21 09:34:43] 2025-11-21 14:33:51,932 | INFO     | cat /etc/os-release:
[2025-11-21 09:34:43] NAME="CentOS Linux"
[2025-11-21 09:34:43] VERSION="7 (Core)"
[2025-11-21 09:34:43] ID="centos"
[2025-11-21 09:34:43] ID_LIKE="rhel fedora"
[2025-11-21 09:34:43] VERSION_ID="7"
[2025-11-21 09:34:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 09:34:43] ANSI_COLOR="0;31"
[2025-11-21 09:34:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 09:34:43] HOME_URL="https://www.centos.org/"
[2025-11-21 09:34:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 09:34:43] 
[2025-11-21 09:34:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 09:34:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 09:34:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 09:34:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 09:34:43] 
[2025-11-21 09:34:43] 2025-11-21 14:33:51,932 | INFO     | ***************************************
[2025-11-21 09:34:43] 2025-11-21 14:33:52,435 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 09:34:43] 2025-11-21 14:33:52,456 | INFO     | sufficient remaining disk space (17468227584 B)
[2025-11-21 09:34:43] 2025-11-21 14:33:52,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 09:34:43] 2025-11-21 14:33:52,456 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 09:34:43] 2025-11-21 14:33:52,457 | INFO     | update_server=False
[2025-11-21 09:34:43] 2025-11-21 14:33:52,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 09:34:43] 2025-11-21 14:33:52,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:34:43] 2025-11-21 14:33:52,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:34:43] 2025-11-21 14:33:52,458 | INFO     | aborting loop
[2025-11-21 09:34:43] 2025-11-21 14:33:53,042 | INFO     | all payload control threads have been joined
[2025-11-21 09:34:43] 2025-11-21 14:33:53,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 09:34:43] 2025-11-21 14:33:53,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 09:34:43] 2025-11-21 14:33:53,463 | INFO     | [job] retrieve thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:53,463 | INFO     | [job] queue monitor thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:53,465 | INFO     | [job] job monitor thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:53,514 | INFO     | all data control threads have been joined
[2025-11-21 09:34:43] 2025-11-21 14:33:53,752 | INFO     | all job control threads have been joined
[2025-11-21 09:34:43] 2025-11-21 14:33:54,049 | INFO     | [payload] control thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:54,109 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:54,215 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:54,480 | INFO     | [job] validate thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:54,519 | INFO     | [data] control thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:54,575 | INFO     | [data] copytool_in thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:54,613 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:54,668 | INFO     | [payload] failed_post thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:54,754 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:54,757 | INFO     | [job] control thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:54,880 | INFO     | [payload] validate_post thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:55,206 | INFO     | [data] copytool_out thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:33:57,285 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 09:34:43] 2025-11-21 14:34:23,308 | INFO     | PID=4539 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 09:34:43] 2025-11-21 14:34:23,308 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 09:34:43] 2025-11-21 14:34:23,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 09:34:43] 2025-11-21 14:34:23,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 09:34:43] 2025-11-21 14:34:37,338 | INFO     | [monitor] cgroup control has ended
[2025-11-21 09:34:43] 2025-11-21 14:34:38,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140102818764608)>', '<ExcThread(monitor, started 140102135166720)>']
[2025-11-21 09:34:43] 2025-11-21 14:34:38,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 09:34:43] 2025-11-21 14:34:38,377 | INFO     | [monitor] control thread has ended
[2025-11-21 09:34:43] 2025-11-21 14:34:43,318 | INFO     | all workflow threads have been joined
[2025-11-21 09:34:43] 2025-11-21 14:34:43,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 09:34:43] 2025-11-21 14:34:43,319 | INFO     | traces error code: 0
[2025-11-21 09:34:43] 2025-11-21 14:34:43,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 09:34:43] 2025-11-21 14:34:43,431 [wrapper] ==== pilot stdout END ====
[2025-11-21 09:34:43] 2025-11-21 14:34:43,436 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 09:34:43] 2025-11-21 14:34:43,441 [wrapper] pilotpid: 4539
[2025-11-21 09:34:43] 2025-11-21 14:34:43,446 [wrapper] Pilot exit status: 0
[2025-11-21 09:34:43] 2025-11-21 14:34:43,463 [wrapper] pandaids: 6893871872
[2025-11-21 09:34:43] 2025-11-21 14:34:43,522 [wrapper] cleanup supervisor_pilot 11582 4540
[2025-11-21 09:34:43] 2025-11-21 14:34:43,527 [wrapper] Test setup, not cleaning
[2025-11-21 09:34:43] 2025-11-21 14:34:43,532 [wrapper] apfmon messages muted
[2025-11-21 09:34:43] 2025-11-21 14:34:43,537 [wrapper] ==== wrapper stdout END ====
[2025-11-21 09:34:43] 2025-11-21 14:34:43,542 [wrapper] ==== wrapper stderr END ====
[2025-11-21 09:34:43]  *** Error codes and diagnostics ***
[2025-11-21 09:34:43]     "exeErrorCode": 0,
[2025-11-21 09:34:43]     "exeErrorDiag": "",
[2025-11-21 09:34:43]     "pilotErrorCode": 0,
[2025-11-21 09:34:43]     "pilotErrorDiag": "",
[2025-11-21 09:34:43]  *** Listing of results directory ***
[2025-11-21 09:34:43] total 1320584
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 10:07 pilot3.tar.gz
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 10:09 queuedata.json
[2025-11-21 09:34:43] -rwx------ 1 boincer umatlas     36292 Nov 20 10:10 runpilot2-wrapper.sh
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas       100 Nov 20 20:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 09:34:43] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 20:55 run_atlas
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas       105 Nov 20 20:55 job.xml
[2025-11-21 09:34:43] -rw-r--r-- 2 boincer umatlas 408925932 Nov 20 20:56 EVNT.47493127._000668.pool.root.1
[2025-11-21 09:34:43] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 20:56 start_atlas.sh
[2025-11-21 09:34:43] drwxrwx--x 2 boincer umatlas      4096 Nov 20 20:56 shared
[2025-11-21 09:34:43] -rw-r--r-- 2 boincer umatlas    590097 Nov 20 20:56 input.tar.gz
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas         0 Nov 20 20:56 boinc_lockfile
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas      2785 Nov 20 20:56 pandaJob.out
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas        57 Nov 20 20:56 setup.sh.local
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas    989817 Nov 20 20:56 agis_schedconf.cvmfs.json
[2025-11-21 09:34:43] drwx------ 5 boincer umatlas      4096 Nov 20 20:56 pilot3
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas       532 Nov 21 09:23 boinc_task_state.xml
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas      5912 Nov 21 09:30 init_data.xml
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas 922936313 Nov 21 09:33 HITS.47523449._006672.pool.root.1
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas        95 Nov 21 09:33 pilot_heartbeat.json
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas      1064 Nov 21 09:33 memory_monitor_summary.json
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas   1526164 Nov 21 09:33 agis_ddmendpoints.agis.ALL.json
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas   1988671 Nov 21 09:33 log.47523449._006672.job.log.tgz.1
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas      8675 Nov 21 09:33 heartbeat.json
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas        29 Nov 21 09:34 wrapper_checkpoint.txt
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 09:34 boinc_mmap_file
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas      4745 Nov 21 09:34 pilotlog.txt
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas   6254878 Nov 21 09:34 log.47523449._006672.job.log.1
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas       353 Nov 21 09:34 output.list
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas       620 Nov 21 09:34 runtime_log
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas   8263680 Nov 21 09:34 result.tar.gz
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas       668 Nov 21 09:34 XGDNDmVTLg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCqGKDmBImXOn.diag
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas      9343 Nov 21 09:34 runtime_log.err
[2025-11-21 09:34:43] -rw-r--r-- 1 boincer umatlas     21292 Nov 21 09:34 stderr.txt
[2025-11-21 09:34:43] HITS file was successfully produced:
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas 922936313 Nov 21 09:33 shared/HITS.pool.root.1
[2025-11-21 09:34:43]  *** Contents of shared directory: ***
[2025-11-21 09:34:43] total 1309324
[2025-11-21 09:34:43] -rw-r--r-- 2 boincer umatlas 408925932 Nov 20 20:56 ATLAS.root_0
[2025-11-21 09:34:43] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 20:56 start_atlas.sh
[2025-11-21 09:34:43] -rw-r--r-- 2 boincer umatlas    590097 Nov 20 20:56 input.tar.gz
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas 922936313 Nov 21 09:33 HITS.pool.root.1
[2025-11-21 09:34:43] -rw------- 1 boincer umatlas   8263680 Nov 21 09:34 result.tar.gz
09:34:44 (742): run_atlas exited; CPU time 347933.559030
09:34:44 (742): called boinc_finish(0)

</stderr_txt>
]]>

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