Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:59:11 (3929991): wrapper (7.7.26015): starting
20:59:11 (3929991): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 20:59:11] Arguments: --nthreads 4
[2025-11-25 20:59:11] Threads: 4
[2025-11-25 20:59:11] Checking for CVMFS
[2025-11-25 20:59:11] No cvmfs_config command found, will try listing directly
[2025-11-25 20:59:11] CVMFS is ok
[2025-11-25 20:59:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:59:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:59:11] Further information can be found at the LHC@home message board.
[2025-11-25 20:59:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:59:11] Checking for apptainer binary...
[2025-11-25 20:59:11] which: no apptainer in ((null))
[2025-11-25 20:59:11] apptainer is not installed, using version from CVMFS
[2025-11-25 20:59:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:59:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-11-25 20:59:11] apptainer works
[2025-11-25 20:59:11] Set ATHENA_PROC_NUMBER=4
[2025-11-25 20:59:11] Set ATHENA_CORE_NUMBER=4
[2025-11-25 20:59:11] Starting ATLAS job with PandaID=6893848598
[2025-11-25 20:59:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:38:25]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:38:25] 2025-11-26 11:37:39,532 | INFO     | PID=3934073 has CPU usage=27.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 12:38:25] 2025-11-26 11:37:39,532 | INFO     | .. there are 7 such processes running
[2025-11-26 12:38:25] 2025-11-26 11:37:39,570 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 12:38:25] 2025-11-26 11:37:39,592 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2686.842742187501
[2025-11-26 12:38:25] 2025-11-26 11:37:39,616 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6893848598/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:38:25] 2025-11-26 11:37:39,617 | INFO     | extracted standard info from prmon json
[2025-11-26 12:38:25] 2025-11-26 11:37:39,617 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:38:25] 2025-11-26 11:37:39,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:38:25] 2025-11-26 11:37:39,632 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:38:25] 2025-11-26 11:37:39,633 | INFO     | sum of square deviations: 243036037770.5
[2025-11-26 12:38:25] 2025-11-26 11:37:39,653 | INFO     | sum of deviations: 706333753002.5004
[2025-11-26 12:38:25] 2025-11-26 11:37:39,653 | INFO     | mean x: 1764128892.5
[2025-11-26 12:38:25] 2025-11-26 11:37:39,653 | INFO     | mean y: 2268285.460954447
[2025-11-26 12:38:25] 2025-11-26 11:37:39,653 | INFO     | intersect: -5124805842.518094
[2025-11-26 12:38:25] 2025-11-26 11:37:39,654 | INFO     | chi2: 3.835657724992072
[2025-11-26 12:38:25] 2025-11-26 11:37:39,655 | INFO     | sum of square deviations: 239103489618.0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,673 | INFO     | sum of deviations: 860598644073.0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,674 | INFO     | mean x: 1764128740.0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,674 | INFO     | mean y: 2274260.629225736
[2025-11-26 12:38:25] 2025-11-26 11:37:39,674 | INFO     | intersect: -6347306015.425087
[2025-11-26 12:38:25] 2025-11-26 11:37:39,675 | INFO     | chi2: 2.240337305182448
[2025-11-26 12:38:25] 2025-11-26 11:37:39,675 | INFO     | current chi2=2.240337305182448 (change=41.59183467844284 %)
[2025-11-26 12:38:25] 2025-11-26 11:37:39,676 | INFO     | sum of square deviations: 235213593428.0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,694 | INFO     | sum of deviations: 888192407775.0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,694 | INFO     | mean x: 1764128587.5
[2025-11-26 12:38:25] 2025-11-26 11:37:39,695 | INFO     | mean y: 2275340.10745614
[2025-11-26 12:38:25] 2025-11-26 11:37:39,695 | INFO     | intersect: -6659268301.654753
[2025-11-26 12:38:25] 2025-11-26 11:37:39,696 | INFO     | chi2: 2.14313206159623
[2025-11-26 12:38:25] 2025-11-26 11:37:39,696 | INFO     | current chi2=2.14313206159623 (change=4.338866444858931 %)
[2025-11-26 12:38:25] 2025-11-26 11:37:39,696 | INFO     | right removable region: 911
[2025-11-26 12:38:25] 2025-11-26 11:37:39,697 | INFO     | sum of square deviations: 239103489618.0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,715 | INFO     | sum of deviations: 527861546597.0001
[2025-11-26 12:38:25] 2025-11-26 11:37:39,715 | INFO     | mean x: 1764129045.0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,715 | INFO     | mean y: 2275194.544165758
[2025-11-26 12:38:25] 2025-11-26 11:37:39,715 | INFO     | intersect: -3892339173.3938828
[2025-11-26 12:38:25] 2025-11-26 11:37:39,716 | INFO     | chi2: 1.812497837558635
[2025-11-26 12:38:25] 2025-11-26 11:37:39,717 | INFO     | current chi2=1.812497837558635 (change=52.74610073393915 %)
[2025-11-26 12:38:25] 2025-11-26 11:37:39,718 | INFO     | sum of square deviations: 235213593428.0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,736 | INFO     | sum of deviations: 502061969459.50006
[2025-11-26 12:38:25] 2025-11-26 11:37:39,736 | INFO     | mean x: 1764129197.5
[2025-11-26 12:38:25] 2025-11-26 11:37:39,736 | INFO     | mean y: 2276205.244517544
[2025-11-26 12:38:25] 2025-11-26 11:37:39,736 | INFO     | intersect: -3763246723.807519
[2025-11-26 12:38:25] 2025-11-26 11:37:39,737 | INFO     | chi2: 1.7967719651852947
[2025-11-26 12:38:25] 2025-11-26 11:37:39,737 | INFO     | current chi2=1.7967719651852947 (change=0.8676353729901476 %)
[2025-11-26 12:38:25] 2025-11-26 11:37:39,737 | INFO     | left removable region: 20
[2025-11-26 12:38:25] 2025-11-26 11:37:39,738 | INFO     | sum of square deviations: 219336540390.0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,755 | INFO     | sum of deviations: 646771421285.0001
[2025-11-26 12:38:25] 2025-11-26 11:37:39,756 | INFO     | mean x: 1764129167.0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,756 | INFO     | mean y: 2284807.938271605
[2025-11-26 12:38:25] 2025-11-26 11:37:39,756 | INFO     | intersect: -5199713576.107242
[2025-11-26 12:38:25] 2025-11-26 11:37:39,757 | INFO     | chi2: 0.09008395278475502
[2025-11-26 12:38:25] 2025-11-26 11:37:39,757 | INFO     | current memory leak: 2.95 B/s (using 891 data points, chi2=0.09)
[2025-11-26 12:38:25] 2025-11-26 11:37:39,758 | INFO     | could have reported an average CPU frequency of 2690 MHz (35 samples)
[2025-11-26 12:38:25] 2025-11-26 11:37:39,758 | INFO     | ..............................
[2025-11-26 12:38:25] 2025-11-26 11:37:39,758 | INFO     | . Timing measurements:
[2025-11-26 12:38:25] 2025-11-26 11:37:39,758 | INFO     | . get job = 0 s
[2025-11-26 12:38:25] 2025-11-26 11:37:39,758 | INFO     | . initial setup = 1 s
[2025-11-26 12:38:25] 2025-11-26 11:37:39,758 | INFO     | . payload setup = 9 s
[2025-11-26 12:38:25] 2025-11-26 11:37:39,758 | INFO     | . stage-in = 0 s
[2025-11-26 12:38:25] 2025-11-26 11:37:39,758 | INFO     | . payload execution = 56249 s
[2025-11-26 12:38:25] 2025-11-26 11:37:39,759 | INFO     | . stage-out = 3 s
[2025-11-26 12:38:25] 2025-11-26 11:37:39,759 | INFO     | . log creation = 0 s
[2025-11-26 12:38:25] 2025-11-26 11:37:39,759 | INFO     | ..............................
[2025-11-26 12:38:25] 2025-11-26 11:37:39,857 | INFO     | 
[2025-11-26 12:38:25] 2025-11-26 11:37:39,857 | INFO     | job summary report
[2025-11-26 12:38:25] 2025-11-26 11:37:39,857 | INFO     | --------------------------------------------------
[2025-11-26 12:38:25] 2025-11-26 11:37:39,857 | INFO     | PanDA job id: 6893848598
[2025-11-26 12:38:25] 2025-11-26 11:37:39,857 | INFO     | task id: 47523449
[2025-11-26 12:38:25] 2025-11-26 11:37:39,857 | INFO     | errors: (none)
[2025-11-26 12:38:25] 2025-11-26 11:37:39,857 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:38:25] 2025-11-26 11:37:39,857 | INFO     | pilot state: finished 
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | transexitcode: 0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | exeerrorcode: 0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | exeerrordiag: 
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | exitcode: 0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | exitmsg: OK
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | cpuconsumptiontime: 225870 s
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | nevents: 1000
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | neventsw: 0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | pid: 3941460
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | pgrp: 3941460
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | corecount: 4
[2025-11-26 12:38:25] 2025-11-26 11:37:39,858 | INFO     | event service: False
[2025-11-26 12:38:25] 2025-11-26 11:37:39,859 | INFO     | sizes: {0: 2284327, 7: 2284589, 11: 2284617, 56263: 2337685, 56267: 2346703, 56268: 2346759, 56275: 2347133}
[2025-11-26 12:38:25] 2025-11-26 11:37:39,859 | INFO     | --------------------------------------------------
[2025-11-26 12:38:25] 2025-11-26 11:37:39,859 | INFO     | 
[2025-11-26 12:38:25] 2025-11-26 11:37:39,859 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-11-26 12:38:25] 2025-11-26 11:37:39,890 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,890 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,890 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,890 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:38:25] 2025-11-26 11:37:39,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:38:25] 2025-11-26 11:37:39,892 | INFO     | job 6893848598 has completed (purged errors)
[2025-11-26 12:38:25] 2025-11-26 11:37:39,892 | INFO     | overall cleanup function is called
[2025-11-26 12:38:25] 2025-11-26 11:37:40,908 | INFO     | --- collectZombieJob: --- 10, [3941460]
[2025-11-26 12:38:25] 2025-11-26 11:37:40,908 | INFO     | zombie collector waiting for pid 3941460
[2025-11-26 12:38:25] 2025-11-26 11:37:40,908 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:38:25] 2025-11-26 11:37:40,908 | INFO     | collected zombie processes
[2025-11-26 12:38:25] 2025-11-26 11:37:40,908 | INFO     | will attempt to kill all subprocesses of pid=3941460
[2025-11-26 12:38:25] 2025-11-26 11:37:41,741 | INFO     | process IDs to be killed: [3941460] (in reverse order)
[2025-11-26 12:38:25] 2025-11-26 11:37:42,002 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:38:25] 2025-11-26 11:37:42,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:38:25] 2025-11-26 11:37:42,034 | INFO     | did not find any defunct processes belonging to 3941460
[2025-11-26 12:38:25] 2025-11-26 11:37:42,064 | INFO     | did not find any defunct processes belonging to 3941460
[2025-11-26 12:38:25] 2025-11-26 11:37:42,066 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:38:25] 2025-11-26 11:37:42,066 | INFO     | ready for new job
[2025-11-26 12:38:25] 2025-11-26 11:37:42,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:38:25] 2025-11-26 11:37:42,073 | INFO     | ***************************************
[2025-11-26 12:38:25] 2025-11-26 11:37:42,073 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:38:25] 2025-11-26 11:37:42,073 | INFO     | ***************************************
[2025-11-26 12:38:25] 2025-11-26 11:37:42,073 | INFO     | 
[2025-11-26 12:38:25] 2025-11-26 11:37:42,082 | INFO     | architecture information:
[2025-11-26 12:38:25] 2025-11-26 11:37:42,082 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:38:25] 2025-11-26 11:37:42,105 | INFO     | cat /etc/os-release:
[2025-11-26 12:38:25] NAME="CentOS Linux"
[2025-11-26 12:38:25] VERSION="7 (Core)"
[2025-11-26 12:38:25] ID="centos"
[2025-11-26 12:38:25] ID_LIKE="rhel fedora"
[2025-11-26 12:38:25] VERSION_ID="7"
[2025-11-26 12:38:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:38:25] ANSI_COLOR="0;31"
[2025-11-26 12:38:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:38:25] HOME_URL="https://www.centos.org/"
[2025-11-26 12:38:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:38:25] 
[2025-11-26 12:38:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:38:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:38:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:38:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:38:25] 
[2025-11-26 12:38:25] 2025-11-26 11:37:42,105 | INFO     | ***************************************
[2025-11-26 12:38:25] 2025-11-26 11:37:42,608 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-11-26 12:38:25] 2025-11-26 11:37:42,632 | INFO     | sufficient remaining disk space (3298233942016 B)
[2025-11-26 12:38:25] 2025-11-26 11:37:42,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:38:25] 2025-11-26 11:37:42,633 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:38:25] 2025-11-26 11:37:42,633 | INFO     | update_server=False
[2025-11-26 12:38:25] 2025-11-26 11:37:42,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:38:25] 2025-11-26 11:37:42,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:38:25] 2025-11-26 11:37:42,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:38:25] 2025-11-26 11:37:42,927 | INFO     | aborting loop
[2025-11-26 12:38:25] 2025-11-26 11:37:43,263 | INFO     | all payload control threads have been joined
[2025-11-26 12:38:25] 2025-11-26 11:37:43,345 | INFO     | all job control threads have been joined
[2025-11-26 12:38:25] 2025-11-26 11:37:43,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:38:25] 2025-11-26 11:37:43,603 | INFO     | all data control threads have been joined
[2025-11-26 12:38:25] 2025-11-26 11:37:43,638 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:43,690 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:43,743 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:43,792 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:43,913 | INFO     | [job] validate thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:43,932 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:44,268 | INFO     | [payload] control thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:44,343 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:44,349 | INFO     | [job] control thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:44,608 | INFO     | [data] control thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:44,639 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:44,644 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:44,868 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:38:25] 2025-11-26 11:37:45,039 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:45,870 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:47,415 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:53,610 | INFO     | job.realtimelogging is not enabled
[2025-11-26 12:38:25] 2025-11-26 11:37:54,616 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:38:25] 2025-11-26 11:37:57,414 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:38:25] 2025-11-26 11:37:57,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22609384417088)>', '<ExcThread(monitor, started 22609131407104)>']
[2025-11-26 12:38:25] 2025-11-26 11:38:02,624 | INFO     | all workflow threads have been joined
[2025-11-26 12:38:25] 2025-11-26 11:38:02,624 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:38:25] 2025-11-26 11:38:02,624 | INFO     | traces error code: 0
[2025-11-26 12:38:25] 2025-11-26 11:38:02,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:38:25] 2025-11-26 11:38:12,620 | INFO     | PID=3934073 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:38:25] 2025-11-26 11:38:12,620 | INFO     | .. there are 7 such processes running
[2025-11-26 12:38:25] 2025-11-26 11:38:12,621 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:38:25] 2025-11-26 11:38:12,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:38:25] 2025-11-26 11:38:12,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:38:25] 2025-11-26 11:38:12,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:38:25] 2025-11-26 11:38:12,622 | INFO     | [monitor] control thread has ended
[2025-11-26 12:38:25] 2025-11-26 11:38:12,770 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:38:25] 2025-11-26 11:38:12,775 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:38:25] 2025-11-26 11:38:12,779 [wrapper] pilotpid: 3934073
[2025-11-26 12:38:25] 2025-11-26 11:38:12,785 [wrapper] Pilot exit status: 0
[2025-11-26 12:38:25] 2025-11-26 11:38:12,802 [wrapper] pandaids: 6893848598
[2025-11-26 12:38:25] 2025-11-26 11:38:12,977 [wrapper] cleanup supervisor_pilot 1027860 3934074
[2025-11-26 12:38:25] 2025-11-26 11:38:12,981 [wrapper] Test setup, not cleaning
[2025-11-26 12:38:25] 2025-11-26 11:38:12,985 [wrapper] apfmon messages muted
[2025-11-26 12:38:25] 2025-11-26 11:38:12,988 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:38:25] 2025-11-26 11:38:12,992 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:38:25]  *** Error codes and diagnostics ***
[2025-11-26 12:38:25]     "exeErrorCode": 0,
[2025-11-26 12:38:25]     "exeErrorDiag": "",
[2025-11-26 12:38:25]     "pilotErrorCode": 0,
[2025-11-26 12:38:25]     "pilotErrorDiag": "",
[2025-11-26 12:38:25]  *** Listing of results directory ***
[2025-11-26 12:38:25] total 1319556
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-26 12:38:25] -rwx------ 1 boinc boinc     36292 Nov 20 11:47 runpilot2-wrapper.sh
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:47 queuedata.json
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc       100 Nov 25 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:38:25] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 20:59 run_atlas
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc       105 Nov 25 20:59 job.xml
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc      6688 Nov 25 20:59 init_data.xml
[2025-11-26 12:38:25] -rw-r--r-- 2 boinc boinc 409247115 Nov 25 20:59 EVNT.47493127._000282.pool.root.1
[2025-11-26 12:38:25] drwxrwx--x 2 boinc boinc      4096 Nov 25 20:59 shared
[2025-11-26 12:38:25] -rw-r--r-- 2 boinc boinc    590094 Nov 25 20:59 input.tar.gz
[2025-11-26 12:38:25] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:59 start_atlas.sh
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc         0 Nov 25 20:59 boinc_lockfile
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc      2786 Nov 25 20:59 pandaJob.out
[2025-11-26 12:38:25] -rw------- 1 boinc boinc    991893 Nov 25 20:59 agis_schedconf.cvmfs.json
[2025-11-26 12:38:25] drwx------ 5 boinc boinc      4096 Nov 25 20:59 pilot3
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc       532 Nov 26 12:28 boinc_task_state.xml
[2025-11-26 12:38:25] -rw------- 1 boinc boinc 919196576 Nov 26 12:36 HITS.47523449._002814.pool.root.1
[2025-11-26 12:38:25] -rw------- 1 boinc boinc      1040 Nov 26 12:37 memory_monitor_summary.json
[2025-11-26 12:38:25] -rw------- 1 boinc boinc   1516240 Nov 26 12:37 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:38:25] -rw------- 1 boinc boinc   1669609 Nov 26 12:37 log.47523449._002814.job.log.tgz.1
[2025-11-26 12:38:25] -rw------- 1 boinc boinc      8607 Nov 26 12:37 heartbeat.json
[2025-11-26 12:38:25] -rw------- 1 boinc boinc        95 Nov 26 12:38 pilot_heartbeat.json
[2025-11-26 12:38:25] -rw------- 1 boinc boinc       822 Nov 26 12:38 pilotlog.txt
[2025-11-26 12:38:25] -rw------- 1 boinc boinc   7762053 Nov 26 12:38 log.47523449._002814.job.log.1
[2025-11-26 12:38:25] -rw------- 1 boinc boinc       353 Nov 26 12:38 output.list
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc       620 Nov 26 12:38 runtime_log
[2025-11-26 12:38:25] -rw------- 1 boinc boinc   9451520 Nov 26 12:38 result.tar.gz
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc      9223 Nov 26 12:38 runtime_log.err
[2025-11-26 12:38:25] -rw------- 1 boinc boinc       670 Nov 26 12:38 YeRLDmkNHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrXHKDmHivstm.diag
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc        28 Nov 26 12:38 wrapper_checkpoint.txt
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc      8192 Nov 26 12:38 boinc_mmap_file
[2025-11-26 12:38:25] -rw-r--r-- 1 boinc boinc     21079 Nov 26 12:38 stderr.txt
[2025-11-26 12:38:25] HITS file was successfully produced:
[2025-11-26 12:38:25] -rw------- 1 boinc boinc 919196576 Nov 26 12:36 shared/HITS.pool.root.1
[2025-11-26 12:38:25]  *** Contents of shared directory: ***
[2025-11-26 12:38:25] total 1307148
[2025-11-26 12:38:25] -rw-r--r-- 2 boinc boinc 409247115 Nov 25 20:59 ATLAS.root_0
[2025-11-26 12:38:25] -rw-r--r-- 2 boinc boinc    590094 Nov 25 20:59 input.tar.gz
[2025-11-26 12:38:25] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:59 start_atlas.sh
[2025-11-26 12:38:25] -rw------- 1 boinc boinc 919196576 Nov 26 12:36 HITS.pool.root.1
[2025-11-26 12:38:25] -rw------- 1 boinc boinc   9451520 Nov 26 12:38 result.tar.gz
12:38:26 (3929991): run_atlas exited; CPU time 228890.343174
12:38:26 (3929991): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN