Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:52 (3921540): wrapper (7.7.26015): starting
00:00:52 (3921540): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 00:00:53] Arguments: --nthreads 12
[2025-11-21 00:00:53] Threads: 12
[2025-11-21 00:00:53] Checking for CVMFS
[2025-11-21 00:00:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:00:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:00:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:00:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:00:53] 2.13.2.0 5582 25254 169088 153108 1 64 28345613 39288832 9069 16776704 0 13521954 99.575 13148616 38346 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:00:53] CVMFS is ok
[2025-11-21 00:00:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:00:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:00:53] Further information can be found at the LHC@home message board.
[2025-11-21 00:00:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:00:53] Checking for apptainer binary...
[2025-11-21 00:00:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:00:53] Running /usr/bin/apptainer --version
[2025-11-21 00:00:53] apptainer version 1.4.4-1.el9
[2025-11-21 00:00:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:00:53] c-210-22.aglt2.org
[2025-11-21 00:00:53] apptainer works
[2025-11-21 00:00:53] Set ATHENA_PROC_NUMBER=12
[2025-11-21 00:00:53] Set ATHENA_CORE_NUMBER=12
[2025-11-21 00:00:53] Starting ATLAS job with PandaID=6893848036
[2025-11-21 00:00:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 03:06:32]  *** The last 200 lines of the pilot log: ***
[2025-11-22 03:06:32] 2025-11-22 08:05:25,974 | INFO     | time since job start (97456s) is within the limit (172800.0s)
[2025-11-22 03:06:32] 2025-11-22 08:05:26,539 | INFO     | monitor loop #5495: job 0:6893848036 is in state 'finished'
[2025-11-22 03:06:32] 2025-11-22 08:05:26,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:06:32] 2025-11-22 08:05:27,981 | INFO     | time since job start (97458s) is within the limit (172800.0s)
[2025-11-22 03:06:32] 2025-11-22 08:05:29,065 | INFO     | monitor loop #5496: job 0:6893848036 is in state 'finished'
[2025-11-22 03:06:32] 2025-11-22 08:05:29,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:06:32] 2025-11-22 08:05:30,023 | INFO     | time since job start (97461s) is within the limit (172800.0s)
[2025-11-22 03:06:32] 2025-11-22 08:05:31,625 | INFO     | monitor loop #5497: job 0:6893848036 is in state 'finished'
[2025-11-22 03:06:32] 2025-11-22 08:05:31,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:06:32] 2025-11-22 08:05:32,069 | INFO     | time since job start (97463s) is within the limit (172800.0s)
[2025-11-22 03:06:32] 2025-11-22 08:05:34,076 | INFO     | time since job start (97465s) is within the limit (172800.0s)
[2025-11-22 03:06:32] 2025-11-22 08:05:34,134 | INFO     | monitor loop #5498: job 0:6893848036 is in state 'finished'
[2025-11-22 03:06:32] 2025-11-22 08:05:34,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:06:32] 2025-11-22 08:05:36,102 | INFO     | time since job start (97467s) is within the limit (172800.0s)
[2025-11-22 03:06:32] 2025-11-22 08:05:36,644 | INFO     | monitor loop #5499: job 0:6893848036 is in state 'finished'
[2025-11-22 03:06:32] 2025-11-22 08:05:36,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:06:32] 2025-11-22 08:05:37,659 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 03:06:32] 2025-11-22 08:05:37,670 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8975499999992
[2025-11-22 03:06:32] 2025-11-22 08:05:37,683 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6893848036/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 03:06:32] 2025-11-22 08:05:37,688 | INFO     | extracted standard info from prmon json
[2025-11-22 03:06:32] 2025-11-22 08:05:37,689 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 03:06:32] 2025-11-22 08:05:37,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 03:06:32] 2025-11-22 08:05:37,748 | INFO     | fitting pss+swap vs Time
[2025-11-22 03:06:32] 2025-11-22 08:05:37,759 | INFO     | sum of square deviations: 1260875746012.4727
[2025-11-22 03:06:32] 2025-11-22 08:05:38,107 | INFO     | sum of deviations: -3572944884640.0645
[2025-11-22 03:06:32] 2025-11-22 08:05:38,107 | INFO     | mean x: 1763749987.6134086
[2025-11-22 03:06:32] 2025-11-22 08:05:38,107 | INFO     | mean y: 3475001.3953634086
[2025-11-22 03:06:32] 2025-11-22 08:05:38,108 | INFO     | intersect: 5001415136.2236595
[2025-11-22 03:06:32] 2025-11-22 08:05:38,110 | INFO     | chi2: 63.78406121111187
[2025-11-22 03:06:32] 2025-11-22 08:05:38,116 | INFO     | sum of square deviations: 1249067868487.546
[2025-11-22 03:06:32] 2025-11-22 08:05:38,147 | INFO     | time since job start (97469s) is within the limit (172800.0s)
[2025-11-22 03:06:32] 2025-11-22 08:05:38,288 | INFO     | sum of deviations: -2786518647478.36
[2025-11-22 03:06:32] 2025-11-22 08:05:38,289 | INFO     | mean x: 1763749835.1313639
[2025-11-22 03:06:32] 2025-11-22 08:05:38,289 | INFO     | mean y: 3485157.011313639
[2025-11-22 03:06:32] 2025-11-22 08:05:38,289 | INFO     | intersect: 3938196735.9998107
[2025-11-22 03:06:32] 2025-11-22 08:05:38,291 | INFO     | chi2: 58.45565831099568
[2025-11-22 03:06:32] 2025-11-22 08:05:38,292 | INFO     | current chi2=58.45565831099568 (change=8.353815669529558 %)
[2025-11-22 03:06:32] 2025-11-22 08:05:38,292 | INFO     | right removable region: 1590
[2025-11-22 03:06:32] 2025-11-22 08:05:38,294 | INFO     | sum of square deviations: 1249047111569.2615
[2025-11-22 03:06:32] 2025-11-22 08:05:38,355 | INFO     | sum of deviations: -4148429512403.9927
[2025-11-22 03:06:32] 2025-11-22 08:05:38,355 | INFO     | mean x: 1763750140.2294154
[2025-11-22 03:06:32] 2025-11-22 08:05:38,355 | INFO     | mean y: 3482421.3588937777
[2025-11-22 03:06:32] 2025-11-22 08:05:38,355 | INFO     | intersect: 5861382468.893378
[2025-11-22 03:06:32] 2025-11-22 08:05:38,358 | INFO     | chi2: 61.33949257119085
[2025-11-22 03:06:32] 2025-11-22 08:05:38,358 | INFO     | current chi2=61.33949257119085 (change=3.8325697572470436 %)
[2025-11-22 03:06:32] 2025-11-22 08:05:38,358 | INFO     | left removable region: 10
[2025-11-22 03:06:32] 2025-11-22 08:05:38,360 | INFO     | sum of square deviations: 1223310107781.745
[2025-11-22 03:06:32] 2025-11-22 08:05:38,421 | INFO     | sum of deviations: -3370934790144.92
[2025-11-22 03:06:32] 2025-11-22 08:05:38,422 | INFO     | mean x: 1763750109.863924
[2025-11-22 03:06:32] 2025-11-22 08:05:38,422 | INFO     | mean y: 3496889.1120253163
[2025-11-22 03:06:32] 2025-11-22 08:05:38,422 | INFO     | intersect: 4863659957.038691
[2025-11-22 03:06:32] 2025-11-22 08:05:38,424 | INFO     | chi2: 54.752107941483736
[2025-11-22 03:06:32] 2025-11-22 08:05:38,425 | INFO     | current memory leak: -2.76 B/s (using 1580 data points, chi2=54.75)
[2025-11-22 03:06:32] 2025-11-22 08:05:38,426 | INFO     | could have reported an average CPU frequency of 2599 MHz (56 samples)
[2025-11-22 03:06:32] 2025-11-22 08:05:38,426 | INFO     | ..............................
[2025-11-22 03:06:32] 2025-11-22 08:05:38,427 | INFO     | . Timing measurements:
[2025-11-22 03:06:32] 2025-11-22 08:05:38,427 | INFO     | . get job = 0 s
[2025-11-22 03:06:32] 2025-11-22 08:05:38,427 | INFO     | . initial setup = 2 s
[2025-11-22 03:06:32] 2025-11-22 08:05:38,427 | INFO     | . payload setup = 8 s
[2025-11-22 03:06:32] 2025-11-22 08:05:38,427 | INFO     | . stage-in = 0 s
[2025-11-22 03:06:32] 2025-11-22 08:05:38,427 | INFO     | . payload execution = 97378 s
[2025-11-22 03:06:32] 2025-11-22 08:05:38,427 | INFO     | . stage-out = 17 s
[2025-11-22 03:06:32] 2025-11-22 08:05:38,427 | INFO     | . log creation = 5 s
[2025-11-22 03:06:32] 2025-11-22 08:05:38,427 | INFO     | ..............................
[2025-11-22 03:06:32] 2025-11-22 08:05:38,557 | INFO     | 
[2025-11-22 03:06:32] 2025-11-22 08:05:38,724 | INFO     | job summary report
[2025-11-22 03:06:32] 2025-11-22 08:05:38,724 | INFO     | --------------------------------------------------
[2025-11-22 03:06:32] 2025-11-22 08:05:38,724 | INFO     | PanDA job id: 6893848036
[2025-11-22 03:06:32] 2025-11-22 08:05:38,724 | INFO     | task id: 47523449
[2025-11-22 03:06:32] 2025-11-22 08:05:38,724 | INFO     | errors: (none)
[2025-11-22 03:06:32] 2025-11-22 08:05:38,724 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 03:06:32] 2025-11-22 08:05:38,724 | INFO     | pilot state: finished 
[2025-11-22 03:06:32] 2025-11-22 08:05:38,725 | INFO     | transexitcode: 0
[2025-11-22 03:06:32] 2025-11-22 08:05:38,725 | INFO     | exeerrorcode: 0
[2025-11-22 03:06:32] 2025-11-22 08:05:38,725 | INFO     | exeerrordiag: 
[2025-11-22 03:06:32] 2025-11-22 08:05:38,725 | INFO     | exitcode: 0
[2025-11-22 03:06:32] 2025-11-22 08:05:38,725 | INFO     | exitmsg: OK
[2025-11-22 03:06:32] 2025-11-22 08:05:38,725 | INFO     | cpuconsumptiontime: 301703 s
[2025-11-22 03:06:32] 2025-11-22 08:05:38,725 | INFO     | nevents: 1000
[2025-11-22 03:06:32] 2025-11-22 08:05:38,725 | INFO     | neventsw: 0
[2025-11-22 03:06:32] 2025-11-22 08:05:38,725 | INFO     | pid: 3932093
[2025-11-22 03:06:32] 2025-11-22 08:05:38,726 | INFO     | pgrp: 3932093
[2025-11-22 03:06:32] 2025-11-22 08:05:38,726 | INFO     | corecount: 12
[2025-11-22 03:06:32] 2025-11-22 08:05:38,726 | INFO     | event service: False
[2025-11-22 03:06:32] 2025-11-22 08:05:38,726 | INFO     | sizes: {0: 2297978, 1: 2298834, 7: 2299096, 12: 2299124, 97390: 2368380, 97407: 2377558, 97451: 2377748}
[2025-11-22 03:06:32] 2025-11-22 08:05:38,726 | INFO     | --------------------------------------------------
[2025-11-22 03:06:32] 2025-11-22 08:05:38,726 | INFO     | 
[2025-11-22 03:06:32] 2025-11-22 08:05:38,726 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-22 03:06:32] 2025-11-22 08:05:39,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,041 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 03:06:32] 2025-11-22 08:05:39,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 03:06:32] 2025-11-22 08:05:39,044 | INFO     | job 6893848036 has completed (purged errors)
[2025-11-22 03:06:32] 2025-11-22 08:05:39,044 | INFO     | overall cleanup function is called
[2025-11-22 03:06:32] 2025-11-22 08:05:40,133 | INFO     | --- collectZombieJob: --- 10, [3932093]
[2025-11-22 03:06:32] 2025-11-22 08:05:40,134 | INFO     | zombie collector waiting for pid 3932093
[2025-11-22 03:06:32] 2025-11-22 08:05:40,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 03:06:32] 2025-11-22 08:05:40,134 | INFO     | collected zombie processes
[2025-11-22 03:06:32] 2025-11-22 08:05:40,134 | INFO     | will attempt to kill all subprocesses of pid=3932093
[2025-11-22 03:06:32] 2025-11-22 08:05:41,017 | INFO     | process IDs to be killed: [3932093] (in reverse order)
[2025-11-22 03:06:32] 2025-11-22 08:05:41,159 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 03:06:32] 2025-11-22 08:05:41,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 03:06:32] 2025-11-22 08:05:41,225 | INFO     | did not find any defunct processes belonging to 3932093
[2025-11-22 03:06:32] 2025-11-22 08:05:41,247 | INFO     | did not find any defunct processes belonging to 3932093
[2025-11-22 03:06:32] 2025-11-22 08:05:41,297 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 03:06:32] 2025-11-22 08:05:41,297 | INFO     | ready for new job
[2025-11-22 03:06:32] 2025-11-22 08:05:41,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 03:06:32] 2025-11-22 08:05:41,352 | INFO     | ***************************************
[2025-11-22 03:06:32] 2025-11-22 08:05:41,404 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 03:06:32] 2025-11-22 08:05:41,404 | INFO     | ***************************************
[2025-11-22 03:06:32] 2025-11-22 08:05:41,404 | INFO     | 
[2025-11-22 03:06:32] 2025-11-22 08:05:41,406 | INFO     | architecture information:
[2025-11-22 03:06:32] 2025-11-22 08:05:41,415 | INFO     | executing command: cat /etc/os-release
[2025-11-22 03:06:32] 2025-11-22 08:05:41,943 | INFO     | cat /etc/os-release:
[2025-11-22 03:06:32] NAME="CentOS Linux"
[2025-11-22 03:06:32] VERSION="7 (Core)"
[2025-11-22 03:06:32] ID="centos"
[2025-11-22 03:06:32] ID_LIKE="rhel fedora"
[2025-11-22 03:06:32] VERSION_ID="7"
[2025-11-22 03:06:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 03:06:32] ANSI_COLOR="0;31"
[2025-11-22 03:06:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 03:06:32] HOME_URL="https://www.centos.org/"
[2025-11-22 03:06:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 03:06:32] 
[2025-11-22 03:06:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 03:06:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 03:06:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 03:06:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 03:06:32] 
[2025-11-22 03:06:32] 2025-11-22 08:05:41,943 | INFO     | ***************************************
[2025-11-22 03:06:32] 2025-11-22 08:05:42,460 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-22 03:06:32] 2025-11-22 08:05:42,566 | INFO     | sufficient remaining disk space (47217377280 B)
[2025-11-22 03:06:32] 2025-11-22 08:05:42,566 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 03:06:32] 2025-11-22 08:05:42,567 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 03:06:32] 2025-11-22 08:05:42,567 | INFO     | update_server=False
[2025-11-22 03:06:32] 2025-11-22 08:05:42,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 03:06:32] 2025-11-22 08:05:42,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 03:06:32] 2025-11-22 08:05:42,910 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 03:06:32] 2025-11-22 08:05:42,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 03:06:32] 2025-11-22 08:05:42,918 | INFO     | aborting loop
[2025-11-22 03:06:32] 2025-11-22 08:05:42,946 | INFO     | all data control threads have been joined
[2025-11-22 03:06:32] 2025-11-22 08:05:43,574 | INFO     | [job] retrieve thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:43,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 03:06:32] 2025-11-22 08:05:43,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:43,832 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:43,921 | INFO     | [job] validate thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:43,923 | INFO     | [job] job monitor thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:43,947 | INFO     | all payload control threads have been joined
[2025-11-22 03:06:32] 2025-11-22 08:05:43,951 | INFO     | [data] control thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:44,215 | INFO     | [payload] validate_post thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:44,222 | INFO     | [payload] failed_post thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:44,292 | INFO     | all job control threads have been joined
[2025-11-22 03:06:32] 2025-11-22 08:05:44,598 | INFO     | [job] queue monitor thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:44,630 | INFO     | [data] copytool_in thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:44,638 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:44,670 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:44,953 | INFO     | [payload] control thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:44,959 | INFO     | [data] copytool_out thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:45,310 | INFO     | [job] control thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:05:46,602 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 03:06:32] 2025-11-22 08:06:12,569 | INFO     | PID=3925499 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 03:06:32] 2025-11-22 08:06:12,569 | INFO     | .. there are 10 such processes running
[2025-11-22 03:06:32] 2025-11-22 08:06:12,573 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 03:06:32] 2025-11-22 08:06:12,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 03:06:32] 2025-11-22 08:06:12,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 03:06:32] 2025-11-22 08:06:22,773 | INFO     | [monitor] cgroup control has ended
[2025-11-22 03:06:32] 2025-11-22 08:06:23,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599901697856)>', '<ExcThread(monitor, started 140599093090048)>']
[2025-11-22 03:06:32] 2025-11-22 08:06:23,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 03:06:32] 2025-11-22 08:06:23,643 | INFO     | [monitor] control thread has ended
[2025-11-22 03:06:32] 2025-11-22 08:06:28,323 | INFO     | all workflow threads have been joined
[2025-11-22 03:06:32] 2025-11-22 08:06:28,325 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 03:06:32] 2025-11-22 08:06:28,325 | INFO     | traces error code: 0
[2025-11-22 03:06:32] 2025-11-22 08:06:28,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 03:06:32] 2025-11-22 08:06:31,020 [wrapper] ==== pilot stdout END ====
[2025-11-22 03:06:32] 2025-11-22 08:06:31,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 03:06:32] 2025-11-22 08:06:31,049 [wrapper] pilotpid: 3925499
[2025-11-22 03:06:32] 2025-11-22 08:06:31,082 [wrapper] Pilot exit status: 0
[2025-11-22 03:06:32] 2025-11-22 08:06:31,214 [wrapper] pandaids: 6893848036
[2025-11-22 03:06:32] 2025-11-22 08:06:31,484 [wrapper] cleanup supervisor_pilot 2140427 3925500
[2025-11-22 03:06:32] 2025-11-22 08:06:31,499 [wrapper] Test setup, not cleaning
[2025-11-22 03:06:32] 2025-11-22 08:06:31,529 [wrapper] apfmon messages muted
[2025-11-22 03:06:32] 2025-11-22 08:06:31,557 [wrapper] ==== wrapper stdout END ====
[2025-11-22 03:06:32] 2025-11-22 08:06:31,586 [wrapper] ==== wrapper stderr END ====
[2025-11-22 03:06:32]  *** Error codes and diagnostics ***
[2025-11-22 03:06:32]     "exeErrorCode": 0,
[2025-11-22 03:06:32]     "exeErrorDiag": "",
[2025-11-22 03:06:32]     "pilotErrorCode": 0,
[2025-11-22 03:06:32]     "pilotErrorDiag": "",
[2025-11-22 03:06:32]  *** Listing of results directory ***
[2025-11-22 03:06:32] total 1331532
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-22 03:06:32] -rwx------. 1 boincer umatlas     36292 Nov 20 05:23 runpilot2-wrapper.sh
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:25 queuedata.json
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 03:06:32] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:00 run_atlas
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:00 job.xml
[2025-11-22 03:06:32] -rw-r--r--. 2 boincer umatlas 409083913 Nov 21 00:00 EVNT.47493127._000255.pool.root.1
[2025-11-22 03:06:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:00 start_atlas.sh
[2025-11-22 03:06:32] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:00 shared
[2025-11-22 03:06:32] -rw-r--r--. 2 boincer umatlas    590100 Nov 21 00:00 input.tar.gz
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:00 boinc_lockfile
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 00:00 pandaJob.out
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas        57 Nov 21 00:00 setup.sh.local
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas    989817 Nov 21 00:01 agis_schedconf.cvmfs.json
[2025-11-22 03:06:32] drwx------. 5 boincer umatlas      4096 Nov 21 00:01 pilot3
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas       533 Nov 22 00:44 boinc_task_state.xml
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas 920963041 Nov 22 02:58 HITS.47523449._002544.pool.root.1
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas      6659 Nov 22 03:01 init_data.xml
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas      1070 Nov 22 03:04 memory_monitor_summary.json
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas   1526164 Nov 22 03:04 agis_ddmendpoints.agis.ALL.json
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas   2972700 Nov 22 03:04 log.47523449._002544.job.log.tgz.1
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas      8651 Nov 22 03:05 heartbeat.json
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas        95 Nov 22 03:06 pilot_heartbeat.json
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas      4824 Nov 22 03:06 pilotlog.txt
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas  11784156 Nov 22 03:06 log.47523449._002544.job.log.1
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas       353 Nov 22 03:06 output.list
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 03:06 boinc_mmap_file
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas       620 Nov 22 03:06 runtime_log
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas  14776320 Nov 22 03:06 result.tar.gz
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas      9345 Nov 22 03:06 runtime_log.err
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas       666 Nov 22 03:06 eLmMDmf0Gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFSHKDme3uebm.diag
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas        29 Nov 22 03:06 wrapper_checkpoint.txt
[2025-11-22 03:06:32] -rw-r--r--. 1 boincer umatlas     21761 Nov 22 03:06 stderr.txt
[2025-11-22 03:06:32] HITS file was successfully produced:
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas 920963041 Nov 22 02:58 shared/HITS.pool.root.1
[2025-11-22 03:06:32]  *** Contents of shared directory: ***
[2025-11-22 03:06:32] total 1313916
[2025-11-22 03:06:32] -rw-r--r--. 2 boincer umatlas 409083913 Nov 21 00:00 ATLAS.root_0
[2025-11-22 03:06:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:00 start_atlas.sh
[2025-11-22 03:06:32] -rw-r--r--. 2 boincer umatlas    590100 Nov 21 00:00 input.tar.gz
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas 920963041 Nov 22 02:58 HITS.pool.root.1
[2025-11-22 03:06:32] -rw-------. 1 boincer umatlas  14776320 Nov 22 03:06 result.tar.gz
03:06:34 (3921540): run_atlas exited; CPU time 303060.383441
03:06:34 (3921540): called boinc_finish(0)

</stderr_txt>
]]>

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