Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:20:49 (20829): wrapper (7.7.26015): starting
03:20:49 (20829): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 03:20:49] Arguments: --nthreads 8
[2025-11-24 03:20:49] Threads: 8
[2025-11-24 03:20:49] Checking for CVMFS
[2025-11-24 03:20:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 03:20:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 03:20:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 03:20:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 03:20:50] 2.11.2.0 3755 281917 141708 153229 3 220 18479039 25165824 4573 130560 2 138816060 99.893 72491885 3218 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 03:20:50] CVMFS is ok
[2025-11-24 03:20:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 03:20:50] Checking for apptainer binary...
[2025-11-24 03:20:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 03:20:50] Running /usr/bin/apptainer --version
[2025-11-24 03:20:50] apptainer version 1.3.2-1.el7
[2025-11-24 03:20:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 03:20:58] cg-vwn224.simple-grid.lan
[2025-11-24 03:20:58] apptainer works
[2025-11-24 03:20:58] Set ATHENA_PROC_NUMBER=8
[2025-11-24 03:20:58] Set ATHENA_CORE_NUMBER=8
[2025-11-24 03:20:59] Starting ATLAS job with PandaID=6893870543
[2025-11-24 03:20:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:45:24]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:45:24] 2025-11-25 01:44:42,566 | INFO     | monitor loop #5644: job 0:6893870543 is in state 'finished'
[2025-11-25 02:45:24] 2025-11-25 01:44:42,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:45:24] 2025-11-25 01:44:42,986 | INFO     | time since job start (84004s) is within the limit (172800.0s)
[2025-11-25 02:45:24] 2025-11-25 01:44:44,993 | INFO     | time since job start (84006s) is within the limit (172800.0s)
[2025-11-25 02:45:24] 2025-11-25 01:44:45,079 | INFO     | monitor loop #5645: job 0:6893870543 is in state 'finished'
[2025-11-25 02:45:24] 2025-11-25 01:44:45,080 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:45:24] 2025-11-25 01:44:47,000 | INFO     | time since job start (84009s) is within the limit (172800.0s)
[2025-11-25 02:45:24] 2025-11-25 01:44:47,374 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 02:45:24] 2025-11-25 01:44:47,375 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 02:45:24] 2025-11-25 01:44:47,377 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6893870543/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 02:45:24] 2025-11-25 01:44:47,378 | INFO     | extracted standard info from prmon json
[2025-11-25 02:45:24] 2025-11-25 01:44:47,378 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 02:45:24] 2025-11-25 01:44:47,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:45:24] 2025-11-25 01:44:47,417 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:45:24] 2025-11-25 01:44:47,420 | INFO     | sum of square deviations: 793844661844.6763
[2025-11-25 02:45:24] 2025-11-25 01:44:47,513 | INFO     | sum of deviations: 2885990038230.7593
[2025-11-25 02:45:24] 2025-11-25 01:44:47,514 | INFO     | mean x: 1763993251.6513157
[2025-11-25 02:45:24] 2025-11-25 01:44:47,514 | INFO     | mean y: 2847908.0519005847
[2025-11-25 02:45:24] 2025-11-25 01:44:47,514 | INFO     | intersect: -6410077940.617548
[2025-11-25 02:45:24] 2025-11-25 01:44:47,516 | INFO     | chi2: 18.506136673746923
[2025-11-25 02:45:24] 2025-11-25 01:44:47,518 | INFO     | sum of square deviations: 785172458673.0264
[2025-11-25 02:45:24] 2025-11-25 01:44:47,595 | INFO     | sum of deviations: 3335769287761.4277
[2025-11-25 02:45:24] 2025-11-25 01:44:47,595 | INFO     | mean x: 1763993099.1555393
[2025-11-25 02:45:24] 2025-11-25 01:44:47,595 | INFO     | mean y: 2855816.1819515773
[2025-11-25 02:45:24] 2025-11-25 01:44:47,595 | INFO     | intersect: -7491388204.973364
[2025-11-25 02:45:24] 2025-11-25 01:44:47,597 | INFO     | chi2: 15.352722692954659
[2025-11-25 02:45:24] 2025-11-25 01:44:47,603 | INFO     | current chi2=15.352722692954659 (change=17.03982866000197 %)
[2025-11-25 02:45:24] 2025-11-25 01:44:47,604 | INFO     | right removable region: 1362
[2025-11-25 02:45:24] 2025-11-25 01:44:47,597 | INFO     | monitor loop #5646: job 0:6893870543 is in state 'finished'
[2025-11-25 02:45:24] 2025-11-25 01:44:47,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:45:24] 2025-11-25 01:44:47,606 | INFO     | sum of square deviations: 785171497923.0258
[2025-11-25 02:45:24] 2025-11-25 01:44:47,702 | INFO     | sum of deviations: 2307572633322.313
[2025-11-25 02:45:24] 2025-11-25 01:44:47,702 | INFO     | mean x: 1763993404.1555393
[2025-11-25 02:45:24] 2025-11-25 01:44:47,702 | INFO     | mean y: 2858077.9325018344
[2025-11-25 02:45:24] 2025-11-25 01:44:47,703 | INFO     | intersect: -5181414295.1197405
[2025-11-25 02:45:24] 2025-11-25 01:44:47,704 | INFO     | chi2: 13.788483099169955
[2025-11-25 02:45:24] 2025-11-25 01:44:47,704 | INFO     | current chi2=13.788483099169955 (change=25.492374004075636 %)
[2025-11-25 02:45:24] 2025-11-25 01:44:47,706 | INFO     | sum of square deviations: 776561730538.8265
[2025-11-25 02:45:24] 2025-11-25 01:44:47,802 | INFO     | sum of deviations: 1885536634667.8867
[2025-11-25 02:45:24] 2025-11-25 01:44:47,802 | INFO     | mean x: 1763993556.6597939
[2025-11-25 02:45:24] 2025-11-25 01:44:47,802 | INFO     | mean y: 2865551.023564065
[2025-11-25 02:45:24] 2025-11-25 01:44:47,802 | INFO     | intersect: -4280212462.7388544
[2025-11-25 02:45:24] 2025-11-25 01:44:47,804 | INFO     | chi2: 11.347187126083755
[2025-11-25 02:45:24] 2025-11-25 01:44:47,804 | INFO     | current chi2=11.347187126083755 (change=17.705326652162068 %)
[2025-11-25 02:45:24] 2025-11-25 01:44:47,804 | INFO     | left removable region: 20
[2025-11-25 02:45:24] 2025-11-25 01:44:47,806 | INFO     | sum of square deviations: 749436346112.734
[2025-11-25 02:45:24] 2025-11-25 01:44:47,866 | INFO     | sum of deviations: 2258276067420.3335
[2025-11-25 02:45:24] 2025-11-25 01:44:47,867 | INFO     | mean x: 1763993678.6609538
[2025-11-25 02:45:24] 2025-11-25 01:44:47,867 | INFO     | mean y: 2878715.3919523098
[2025-11-25 02:45:24] 2025-11-25 01:44:47,867 | INFO     | intersect: -5312562320.078664
[2025-11-25 02:45:24] 2025-11-25 01:44:47,869 | INFO     | chi2: 7.218978869675144
[2025-11-25 02:45:24] 2025-11-25 01:44:47,869 | INFO     | current memory leak: 3.01 B/s (using 1342 data points, chi2=7.22)
[2025-11-25 02:45:24] 2025-11-25 01:44:47,871 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-25 02:45:24] 2025-11-25 01:44:47,871 | INFO     | ..............................
[2025-11-25 02:45:24] 2025-11-25 01:44:47,871 | INFO     | . Timing measurements:
[2025-11-25 02:45:24] 2025-11-25 01:44:47,872 | INFO     | . get job = 0 s
[2025-11-25 02:45:24] 2025-11-25 01:44:47,872 | INFO     | . initial setup = 10 s
[2025-11-25 02:45:24] 2025-11-25 01:44:47,872 | INFO     | . payload setup = 141 s
[2025-11-25 02:45:24] 2025-11-25 01:44:47,872 | INFO     | . stage-in = 0 s
[2025-11-25 02:45:24] 2025-11-25 01:44:47,872 | INFO     | . payload execution = 83567 s
[2025-11-25 02:45:24] 2025-11-25 01:44:47,872 | INFO     | . stage-out = 5 s
[2025-11-25 02:45:24] 2025-11-25 01:44:47,872 | INFO     | . log creation = 2 s
[2025-11-25 02:45:24] 2025-11-25 01:44:47,872 | INFO     | ..............................
[2025-11-25 02:45:24] 2025-11-25 01:44:48,068 | INFO     | 
[2025-11-25 02:45:24] 2025-11-25 01:44:48,069 | INFO     | job summary report
[2025-11-25 02:45:24] 2025-11-25 01:44:48,069 | INFO     | --------------------------------------------------
[2025-11-25 02:45:24] 2025-11-25 01:44:48,069 | INFO     | PanDA job id: 6893870543
[2025-11-25 02:45:24] 2025-11-25 01:44:48,069 | INFO     | task id: 47523449
[2025-11-25 02:45:24] 2025-11-25 01:44:48,069 | INFO     | errors: (none)
[2025-11-25 02:45:24] 2025-11-25 01:44:48,069 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:45:24] 2025-11-25 01:44:48,069 | INFO     | pilot state: finished 
[2025-11-25 02:45:24] 2025-11-25 01:44:48,069 | INFO     | transexitcode: 0
[2025-11-25 02:45:24] 2025-11-25 01:44:48,070 | INFO     | exeerrorcode: 0
[2025-11-25 02:45:24] 2025-11-25 01:44:48,070 | INFO     | exeerrordiag: 
[2025-11-25 02:45:24] 2025-11-25 01:44:48,070 | INFO     | exitcode: 0
[2025-11-25 02:45:24] 2025-11-25 01:44:48,070 | INFO     | exitmsg: OK
[2025-11-25 02:45:24] 2025-11-25 01:44:48,070 | INFO     | cpuconsumptiontime: 331345 s
[2025-11-25 02:45:24] 2025-11-25 01:44:48,070 | INFO     | nevents: 1000
[2025-11-25 02:45:24] 2025-11-25 01:44:48,070 | INFO     | neventsw: 0
[2025-11-25 02:45:24] 2025-11-25 01:44:48,070 | INFO     | pid: 31162
[2025-11-25 02:45:24] 2025-11-25 01:44:48,070 | INFO     | pgrp: 31162
[2025-11-25 02:45:24] 2025-11-25 01:44:48,070 | INFO     | corecount: 8
[2025-11-25 02:45:24] 2025-11-25 01:44:48,071 | INFO     | event service: False
[2025-11-25 02:45:24] 2025-11-25 01:44:48,071 | INFO     | sizes: {0: 2297977, 1: 2298833, 2: 2298861, 13: 2298861, 23: 2298917, 34: 2298945, 45: 2299101, 56: 2299129, 66: 2299157, 77: 2299185, 88: 2299241, 92: 2299811, 99
[2025-11-25 02:45:24] 2025-11-25 01:44:48,071 | INFO     | --------------------------------------------------
[2025-11-25 02:45:24] 2025-11-25 01:44:48,071 | INFO     | 
[2025-11-25 02:45:24] 2025-11-25 01:44:48,071 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-25 02:45:24] 2025-11-25 01:44:48,602 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,603 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,603 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,603 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,604 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:45:24] 2025-11-25 01:44:48,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:45:24] 2025-11-25 01:44:48,604 | INFO     | job 6893870543 has completed (purged errors)
[2025-11-25 02:45:24] 2025-11-25 01:44:48,605 | INFO     | overall cleanup function is called
[2025-11-25 02:45:24] 2025-11-25 01:44:49,623 | INFO     | --- collectZombieJob: --- 10, [31162]
[2025-11-25 02:45:24] 2025-11-25 01:44:49,624 | INFO     | zombie collector waiting for pid 31162
[2025-11-25 02:45:24] 2025-11-25 01:44:49,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:45:24] 2025-11-25 01:44:49,624 | INFO     | collected zombie processes
[2025-11-25 02:45:24] 2025-11-25 01:44:49,624 | INFO     | will attempt to kill all subprocesses of pid=31162
[2025-11-25 02:45:24] 2025-11-25 01:44:49,740 | INFO     | process IDs to be killed: [31162] (in reverse order)
[2025-11-25 02:45:24] 2025-11-25 01:44:50,244 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:45:24] 2025-11-25 01:44:50,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:45:24] 2025-11-25 01:44:50,248 | INFO     | did not find any defunct processes belonging to 31162
[2025-11-25 02:45:24] 2025-11-25 01:44:50,250 | INFO     | did not find any defunct processes belonging to 31162
[2025-11-25 02:45:24] 2025-11-25 01:44:50,302 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:45:24] 2025-11-25 01:44:50,302 | INFO     | ready for new job
[2025-11-25 02:45:24] 2025-11-25 01:44:50,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:45:24] 2025-11-25 01:44:50,308 | INFO     | ***************************************
[2025-11-25 02:45:24] 2025-11-25 01:44:50,309 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:45:24] 2025-11-25 01:44:50,309 | INFO     | ***************************************
[2025-11-25 02:45:24] 2025-11-25 01:44:50,309 | INFO     | 
[2025-11-25 02:45:24] 2025-11-25 01:44:50,309 | INFO     | pilot is running in a VM
[2025-11-25 02:45:24] 2025-11-25 01:44:50,310 | INFO     | architecture information:
[2025-11-25 02:45:24] 2025-11-25 01:44:50,322 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:45:24] 2025-11-25 01:44:50,482 | INFO     | cat /etc/os-release:
[2025-11-25 02:45:24] NAME="CentOS Linux"
[2025-11-25 02:45:24] VERSION="7 (Core)"
[2025-11-25 02:45:24] ID="centos"
[2025-11-25 02:45:24] ID_LIKE="rhel fedora"
[2025-11-25 02:45:24] VERSION_ID="7"
[2025-11-25 02:45:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:45:24] ANSI_COLOR="0;31"
[2025-11-25 02:45:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:45:24] HOME_URL="https://www.centos.org/"
[2025-11-25 02:45:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:45:24] 
[2025-11-25 02:45:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:45:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:45:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:45:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:45:24] 
[2025-11-25 02:45:24] 2025-11-25 01:44:50,482 | INFO     | ***************************************
[2025-11-25 02:45:24] 2025-11-25 01:44:50,984 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-25 02:45:24] 2025-11-25 01:44:51,241 | INFO     | sufficient remaining disk space (494886977536 B)
[2025-11-25 02:45:24] 2025-11-25 01:44:51,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:45:24] 2025-11-25 01:44:51,242 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:45:24] 2025-11-25 01:44:51,242 | INFO     | update_server=False
[2025-11-25 02:45:24] 2025-11-25 01:44:51,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:45:24] 2025-11-25 01:44:51,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:45:24] 2025-11-25 01:44:51,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:45:24] 2025-11-25 01:44:51,247 | INFO     | aborting loop
[2025-11-25 02:45:24] 2025-11-25 01:44:52,045 | INFO     | all job control threads have been joined
[2025-11-25 02:45:24] 2025-11-25 01:44:52,249 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:52,252 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:52,330 | INFO     | all data control threads have been joined
[2025-11-25 02:45:24] 2025-11-25 01:44:52,355 | INFO     | all payload control threads have been joined
[2025-11-25 02:45:24] 2025-11-25 01:44:52,485 | INFO     | [job] validate thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:52,769 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:52,980 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:53,008 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:53,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:45:24] 2025-11-25 01:44:53,051 | INFO     | [job] control thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:53,159 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:53,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:45:24] 2025-11-25 01:44:53,249 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:53,336 | INFO     | [data] control thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:53,338 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:53,361 | INFO     | [payload] control thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:53,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:53,628 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:54,015 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:44:57,169 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:45:24] 2025-11-25 01:45:03,626 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:45:24] 2025-11-25 01:45:03,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680943621952)>', '<ExcThread(monitor, started 139680364349184)>']
[2025-11-25 02:45:24] 2025-11-25 01:45:08,986 | INFO     | all workflow threads have been joined
[2025-11-25 02:45:24] 2025-11-25 01:45:08,987 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:45:24] 2025-11-25 01:45:08,987 | INFO     | traces error code: 0
[2025-11-25 02:45:24] 2025-11-25 01:45:08,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:45:24] 2025-11-25 01:45:20,206 | INFO     | PID=24622 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 02:45:24] 2025-11-25 01:45:20,206 | INFO     | .. there are 9 such processes running
[2025-11-25 02:45:24] 2025-11-25 01:45:20,207 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:45:24] 2025-11-25 01:45:20,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:45:24] 2025-11-25 01:45:20,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:45:24] 2025-11-25 01:45:20,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:45:24] 2025-11-25 01:45:20,208 | INFO     | [monitor] control thread has ended
[2025-11-25 02:45:24] 2025-11-25 01:45:20,591 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:45:24] 2025-11-25 01:45:20,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:45:24] 2025-11-25 01:45:20,708 [wrapper] pilotpid: 24622
[2025-11-25 02:45:24] 2025-11-25 01:45:20,774 [wrapper] Pilot exit status: 0
[2025-11-25 02:45:24] 2025-11-25 01:45:21,014 [wrapper] pandaids: 6893870543
[2025-11-25 02:45:24] 2025-11-25 01:45:21,697 [wrapper] cleanup supervisor_pilot 15058 24623
[2025-11-25 02:45:24] 2025-11-25 01:45:21,779 [wrapper] Test setup, not cleaning
[2025-11-25 02:45:24] 2025-11-25 01:45:21,863 [wrapper] apfmon messages muted
[2025-11-25 02:45:24] 2025-11-25 01:45:21,900 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:45:24] 2025-11-25 01:45:22,004 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:45:24]  *** Error codes and diagnostics ***
[2025-11-25 02:45:24]     "exeErrorCode": 0,
[2025-11-25 02:45:24]     "exeErrorDiag": "",
[2025-11-25 02:45:24]     "pilotErrorCode": 0,
[2025-11-25 02:45:24]     "pilotErrorDiag": "",
[2025-11-25 02:45:24]  *** Listing of results directory ***
[2025-11-25 02:45:24] total 1311288
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc    576529 Nov 20 15:50 pilot3.tar.gz
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc      5112 Nov 20 15:58 queuedata.json
[2025-11-25 02:45:24] -rwx------. 1 boinc boinc     36292 Nov 20 15:59 runpilot2-wrapper.sh
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc       100 Nov 24 03:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:45:24] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 03:20 run_atlas
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc       105 Nov 24 03:20 job.xml
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc      6391 Nov 24 03:20 init_data.xml
[2025-11-25 02:45:24] -rw-r--r--. 2 boinc boinc 407902014 Nov 24 03:20 EVNT.47493127._000661.pool.root.1
[2025-11-25 02:45:24] -rw-r--r--. 2 boinc boinc     15847 Nov 24 03:20 start_atlas.sh
[2025-11-25 02:45:24] drwxrwx--x. 2 boinc boinc        68 Nov 24 03:20 shared
[2025-11-25 02:45:24] -rw-r--r--. 2 boinc boinc    590095 Nov 24 03:20 input.tar.gz
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc         0 Nov 24 03:20 boinc_lockfile
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc      2784 Nov 24 03:20 pandaJob.out
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc    989786 Nov 24 03:24 agis_schedconf.cvmfs.json
[2025-11-25 02:45:24] drwx------. 5 boinc boinc      4096 Nov 24 03:24 pilot3
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc       533 Nov 25 02:20 boinc_task_state.xml
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc 903740738 Nov 25 02:41 HITS.47523449._006610.pool.root.1
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc      1029 Nov 25 02:42 memory_monitor_summary.json
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc   1516227 Nov 25 02:43 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc   2460856 Nov 25 02:43 log.47523449._006610.job.log.tgz.1
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc      8627 Nov 25 02:44 heartbeat.json
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc      8192 Nov 25 02:44 boinc_mmap_file
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc        29 Nov 25 02:45 wrapper_checkpoint.txt
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc        95 Nov 25 02:45 pilot_heartbeat.json
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc       820 Nov 25 02:45 pilotlog.txt
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc  11146066 Nov 25 02:45 log.47523449._006610.job.log.1
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc       353 Nov 25 02:45 output.list
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc       620 Nov 25 02:45 runtime_log
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc  13629440 Nov 25 02:45 result.tar.gz
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc       662 Nov 25 02:45 UYhNDm8ILg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjAIKDmum2WIm.diag
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc      8817 Nov 25 02:45 runtime_log.err
[2025-11-25 02:45:24] -rw-r--r--. 1 boinc boinc     21233 Nov 25 02:45 stderr.txt
[2025-11-25 02:45:24] HITS file was successfully produced:
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc 903740738 Nov 25 02:41 shared/HITS.pool.root.1
[2025-11-25 02:45:24]  *** Contents of shared directory: ***
[2025-11-25 02:45:24] total 1294812
[2025-11-25 02:45:24] -rw-r--r--. 2 boinc boinc 407902014 Nov 24 03:20 ATLAS.root_0
[2025-11-25 02:45:24] -rw-r--r--. 2 boinc boinc     15847 Nov 24 03:20 start_atlas.sh
[2025-11-25 02:45:24] -rw-r--r--. 2 boinc boinc    590095 Nov 24 03:20 input.tar.gz
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc 903740738 Nov 25 02:41 HITS.pool.root.1
[2025-11-25 02:45:24] -rw-------. 1 boinc boinc  13629440 Nov 25 02:45 result.tar.gz
02:45:26 (20829): run_atlas exited; CPU time 331884.255215
02:45:26 (20829): called boinc_finish(0)

</stderr_txt>
]]>

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