Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:41:00 (1084): wrapper (7.7.26015): starting
20:41:00 (1084): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 20:41:00] Arguments: --nthreads 8
[2025-11-20 20:41:00] Threads: 8
[2025-11-20 20:41:00] Checking for CVMFS
[2025-11-20 20:41:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:41:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:41:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:41:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:41:01] 2.11.2.0 2802 65452 82020 153103 3 82 18525018 20275201 1 130560 0 18327014 99.912 3224377 20467 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 20:41:01] CVMFS is ok
[2025-11-20 20:41:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 20:41:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 20:41:01] Further information can be found at the LHC@home message board.
[2025-11-20 20:41:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:41:01] Checking for apptainer binary...
[2025-11-20 20:41:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:41:01] Running /usr/bin/apptainer --version
[2025-11-20 20:41:01] apptainer version 1.3.2-1.el7
[2025-11-20 20:41:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:41:02] c-204-8.aglt2.org
[2025-11-20 20:41:02] apptainer works
[2025-11-20 20:41:02] Set ATHENA_PROC_NUMBER=8
[2025-11-20 20:41:02] Set ATHENA_CORE_NUMBER=8
[2025-11-20 20:41:02] Starting ATLAS job with PandaID=6893870201
[2025-11-20 20:41:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 09:06:40]  *** The last 200 lines of the pilot log: ***
[2025-11-21 09:06:40] 2025-11-21 14:05:35,702 | INFO     | time since job start (44655s) is within the limit (172800.0s)
[2025-11-21 09:06:40] 2025-11-21 14:05:35,835 | INFO     | monitor loop #3276: job 0:6893870201 is in state 'finished'
[2025-11-21 09:06:40] 2025-11-21 14:05:35,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,165 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 09:06:40] 2025-11-21 14:05:37,171 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-21 09:06:40] 2025-11-21 14:05:37,174 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893870201/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,175 | INFO     | extracted standard info from prmon json
[2025-11-21 09:06:40] 2025-11-21 14:05:37,175 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 09:06:40] 2025-11-21 14:05:37,175 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 09:06:40] 2025-11-21 14:05:37,191 | INFO     | fitting pss+swap vs Time
[2025-11-21 09:06:40] 2025-11-21 14:05:37,192 | INFO     | sum of square deviations: 121621998554.27718
[2025-11-21 09:06:40] 2025-11-21 14:05:37,205 | INFO     | sum of deviations: 765181034884.2877
[2025-11-21 09:06:40] 2025-11-21 14:05:37,205 | INFO     | mean x: 1763711607.0314207
[2025-11-21 09:06:40] 2025-11-21 14:05:37,205 | INFO     | mean y: 2865998.943989071
[2025-11-21 09:06:40] 2025-11-21 14:05:37,206 | INFO     | intersect: -11093470919.935492
[2025-11-21 09:06:40] 2025-11-21 14:05:37,207 | INFO     | chi2: 6.100312225528233
[2025-11-21 09:06:40] 2025-11-21 14:05:37,208 | INFO     | sum of square deviations: 119146852182.85568
[2025-11-21 09:06:40] 2025-11-21 14:05:37,221 | INFO     | sum of deviations: 996675321801.2112
[2025-11-21 09:06:40] 2025-11-21 14:05:37,222 | INFO     | mean x: 1763711454.5350757
[2025-11-21 09:06:40] 2025-11-21 14:05:37,222 | INFO     | mean y: 2880252.1485557086
[2025-11-21 09:06:40] 2025-11-21 14:05:37,222 | INFO     | intersect: -14750742267.525276
[2025-11-21 09:06:40] 2025-11-21 14:05:37,223 | INFO     | chi2: 3.151369125416515
[2025-11-21 09:06:40] 2025-11-21 14:05:37,223 | INFO     | current chi2=3.151369125416515 (change=48.340855206904855 %)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,224 | INFO     | sum of square deviations: 116705520398.91415
[2025-11-21 09:06:40] 2025-11-21 14:05:37,237 | INFO     | sum of deviations: 1089070237470.2946
[2025-11-21 09:06:40] 2025-11-21 14:05:37,238 | INFO     | mean x: 1763711302.0387812
[2025-11-21 09:06:40] 2025-11-21 14:05:37,238 | INFO     | mean y: 2886021.5609418284
[2025-11-21 09:06:40] 2025-11-21 14:05:37,238 | INFO     | intersect: -16455679776.996513
[2025-11-21 09:06:40] 2025-11-21 14:05:37,239 | INFO     | chi2: 2.5938718141773385
[2025-11-21 09:06:40] 2025-11-21 14:05:37,239 | INFO     | current chi2=2.5938718141773385 (change=17.690638229042502 %)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,239 | INFO     | right removable region: 721
[2025-11-21 09:06:40] 2025-11-21 14:05:37,240 | INFO     | sum of square deviations: 119146614892.85544
[2025-11-21 09:06:40] 2025-11-21 14:05:37,253 | INFO     | sum of deviations: 562218463563.529
[2025-11-21 09:06:40] 2025-11-21 14:05:37,253 | INFO     | mean x: 1763711759.5350757
[2025-11-21 09:06:40] 2025-11-21 14:05:37,253 | INFO     | mean y: 2878481.3713892708
[2025-11-21 09:06:40] 2025-11-21 14:05:37,253 | INFO     | intersect: -8319567913.82367
[2025-11-21 09:06:40] 2025-11-21 14:05:37,254 | INFO     | chi2: 3.7525743573715618
[2025-11-21 09:06:40] 2025-11-21 14:05:37,254 | INFO     | current chi2=3.7525743573715618 (change=38.4855361719355 %)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,255 | INFO     | sum of square deviations: 116705090287.9902
[2025-11-21 09:06:40] 2025-11-21 14:05:37,268 | INFO     | sum of deviations: 518886042568.7411
[2025-11-21 09:06:40] 2025-11-21 14:05:37,268 | INFO     | mean x: 1763711912.0373962
[2025-11-21 09:06:40] 2025-11-21 14:05:37,268 | INFO     | mean y: 2881186.713296399
[2025-11-21 09:06:40] 2025-11-21 14:05:37,268 | INFO     | intersect: -7838811853.496873
[2025-11-21 09:06:40] 2025-11-21 14:05:37,269 | INFO     | chi2: 3.7064277476578726
[2025-11-21 09:06:40] 2025-11-21 14:05:37,269 | INFO     | current chi2=3.7064277476578726 (change=1.2297320537576732 %)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,270 | INFO     | left removable region: 20
[2025-11-21 09:06:40] 2025-11-21 14:05:37,271 | INFO     | sum of square deviations: 106815202097.64894
[2025-11-21 09:06:40] 2025-11-21 14:05:37,283 | INFO     | sum of deviations: 806108020816.996
[2025-11-21 09:06:40] 2025-11-21 14:05:37,283 | INFO     | mean x: 1763711881.5477889
[2025-11-21 09:06:40] 2025-11-21 14:05:37,283 | INFO     | mean y: 2905742.8359486447
[2025-11-21 09:06:40] 2025-11-21 14:05:37,283 | INFO     | intersect: -13307393411.269209
[2025-11-21 09:06:40] 2025-11-21 14:05:37,284 | INFO     | chi2: 0.1049701554075037
[2025-11-21 09:06:40] 2025-11-21 14:05:37,284 | INFO     | current memory leak: 7.55 B/s (using 701 data points, chi2=0.10)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,285 | INFO     | could have reported an average CPU frequency of 2182 MHz (28 samples)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,285 | INFO     | ..............................
[2025-11-21 09:06:40] 2025-11-21 14:05:37,285 | INFO     | . Timing measurements:
[2025-11-21 09:06:40] 2025-11-21 14:05:37,285 | INFO     | . get job = 0 s
[2025-11-21 09:06:40] 2025-11-21 14:05:37,286 | INFO     | . initial setup = 2 s
[2025-11-21 09:06:40] 2025-11-21 14:05:37,286 | INFO     | . payload setup = 8 s
[2025-11-21 09:06:40] 2025-11-21 14:05:37,286 | INFO     | . stage-in = 0 s
[2025-11-21 09:06:40] 2025-11-21 14:05:37,286 | INFO     | . payload execution = 44617 s
[2025-11-21 09:06:40] 2025-11-21 14:05:37,286 | INFO     | . stage-out = 3 s
[2025-11-21 09:06:40] 2025-11-21 14:05:37,286 | INFO     | . log creation = 0 s
[2025-11-21 09:06:40] 2025-11-21 14:05:37,286 | INFO     | ..............................
[2025-11-21 09:06:40] 2025-11-21 14:05:37,392 | INFO     | 
[2025-11-21 09:06:40] 2025-11-21 14:05:37,392 | INFO     | job summary report
[2025-11-21 09:06:40] 2025-11-21 14:05:37,392 | INFO     | --------------------------------------------------
[2025-11-21 09:06:40] 2025-11-21 14:05:37,393 | INFO     | PanDA job id: 6893870201
[2025-11-21 09:06:40] 2025-11-21 14:05:37,393 | INFO     | task id: 47523449
[2025-11-21 09:06:40] 2025-11-21 14:05:37,393 | INFO     | errors: (none)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,393 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 09:06:40] 2025-11-21 14:05:37,393 | INFO     | pilot state: finished 
[2025-11-21 09:06:40] 2025-11-21 14:05:37,393 | INFO     | transexitcode: 0
[2025-11-21 09:06:40] 2025-11-21 14:05:37,394 | INFO     | exeerrorcode: 0
[2025-11-21 09:06:40] 2025-11-21 14:05:37,394 | INFO     | exeerrordiag: 
[2025-11-21 09:06:40] 2025-11-21 14:05:37,394 | INFO     | exitcode: 0
[2025-11-21 09:06:40] 2025-11-21 14:05:37,394 | INFO     | exitmsg: OK
[2025-11-21 09:06:40] 2025-11-21 14:05:37,394 | INFO     | cpuconsumptiontime: 345155 s
[2025-11-21 09:06:40] 2025-11-21 14:05:37,394 | INFO     | nevents: 1000
[2025-11-21 09:06:40] 2025-11-21 14:05:37,395 | INFO     | neventsw: 0
[2025-11-21 09:06:40] 2025-11-21 14:05:37,395 | INFO     | pid: 12464
[2025-11-21 09:06:40] 2025-11-21 14:05:37,395 | INFO     | pgrp: 12464
[2025-11-21 09:06:40] 2025-11-21 14:05:37,395 | INFO     | corecount: 8
[2025-11-21 09:06:40] 2025-11-21 14:05:37,395 | INFO     | event service: False
[2025-11-21 09:06:40] 2025-11-21 14:05:37,395 | INFO     | sizes: {0: 2298584, 1: 2298783, 6: 2299045, 12: 2299073, 44627: 2344858, 44632: 2353852, 44634: 2354036, 44640: 2354282}
[2025-11-21 09:06:40] 2025-11-21 14:05:37,396 | INFO     | --------------------------------------------------
[2025-11-21 09:06:40] 2025-11-21 14:05:37,396 | INFO     | 
[2025-11-21 09:06:40] 2025-11-21 14:05:37,396 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 09:06:40] 2025-11-21 14:05:37,423 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,424 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,424 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,424 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 09:06:40] 2025-11-21 14:05:37,429 | INFO     | job 6893870201 has completed (purged errors)
[2025-11-21 09:06:40] 2025-11-21 14:05:37,429 | INFO     | overall cleanup function is called
[2025-11-21 09:06:40] 2025-11-21 14:05:38,442 | INFO     | --- collectZombieJob: --- 10, [12464]
[2025-11-21 09:06:40] 2025-11-21 14:05:38,442 | INFO     | zombie collector waiting for pid 12464
[2025-11-21 09:06:40] 2025-11-21 14:05:38,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 09:06:40] 2025-11-21 14:05:38,443 | INFO     | collected zombie processes
[2025-11-21 09:06:40] 2025-11-21 14:05:38,443 | INFO     | will attempt to kill all subprocesses of pid=12464
[2025-11-21 09:06:40] 2025-11-21 14:05:38,540 | INFO     | process IDs to be killed: [12464] (in reverse order)
[2025-11-21 09:06:40] 2025-11-21 14:05:38,597 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 09:06:40] 2025-11-21 14:05:38,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 09:06:40] 2025-11-21 14:05:38,604 | INFO     | did not find any defunct processes belonging to 12464
[2025-11-21 09:06:40] 2025-11-21 14:05:38,608 | INFO     | did not find any defunct processes belonging to 12464
[2025-11-21 09:06:40] 2025-11-21 14:05:38,611 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 09:06:40] 2025-11-21 14:05:38,611 | INFO     | ready for new job
[2025-11-21 09:06:40] 2025-11-21 14:05:38,611 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 09:06:40] 2025-11-21 14:05:38,616 | INFO     | ***************************************
[2025-11-21 09:06:40] 2025-11-21 14:05:38,616 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 09:06:40] 2025-11-21 14:05:38,616 | INFO     | ***************************************
[2025-11-21 09:06:40] 2025-11-21 14:05:38,616 | INFO     | 
[2025-11-21 09:06:40] 2025-11-21 14:05:38,617 | INFO     | architecture information:
[2025-11-21 09:06:40] 2025-11-21 14:05:38,618 | INFO     | executing command: cat /etc/os-release
[2025-11-21 09:06:40] 2025-11-21 14:05:38,636 | INFO     | cat /etc/os-release:
[2025-11-21 09:06:40] NAME="CentOS Linux"
[2025-11-21 09:06:40] VERSION="7 (Core)"
[2025-11-21 09:06:40] ID="centos"
[2025-11-21 09:06:40] ID_LIKE="rhel fedora"
[2025-11-21 09:06:40] VERSION_ID="7"
[2025-11-21 09:06:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 09:06:40] ANSI_COLOR="0;31"
[2025-11-21 09:06:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 09:06:40] HOME_URL="https://www.centos.org/"
[2025-11-21 09:06:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 09:06:40] 
[2025-11-21 09:06:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 09:06:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 09:06:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 09:06:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 09:06:40] 
[2025-11-21 09:06:40] 2025-11-21 14:05:38,637 | INFO     | ***************************************
[2025-11-21 09:06:40] 2025-11-21 14:05:39,140 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 09:06:40] 2025-11-21 14:05:39,160 | INFO     | sufficient remaining disk space (17479761920 B)
[2025-11-21 09:06:40] 2025-11-21 14:05:39,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 09:06:40] 2025-11-21 14:05:39,161 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 09:06:40] 2025-11-21 14:05:39,161 | INFO     | update_server=False
[2025-11-21 09:06:40] 2025-11-21 14:05:39,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 09:06:40] 2025-11-21 14:05:39,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:06:40] 2025-11-21 14:05:39,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:06:40] 2025-11-21 14:05:39,344 | INFO     | aborting loop
[2025-11-21 09:06:40] 2025-11-21 14:05:39,369 | INFO     | all payload control threads have been joined
[2025-11-21 09:06:40] 2025-11-21 14:05:39,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 09:06:40] 2025-11-21 14:05:39,912 | INFO     | all job control threads have been joined
[2025-11-21 09:06:40] 2025-11-21 14:05:39,926 | INFO     | all data control threads have been joined
[2025-11-21 09:06:40] 2025-11-21 14:05:40,166 | INFO     | [job] retrieve thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:40,167 | INFO     | [job] queue monitor thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:40,350 | INFO     | [job] job monitor thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:40,372 | INFO     | [payload] control thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:40,375 | INFO     | [payload] failed_post thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:40,433 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:40,533 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:40,918 | INFO     | [job] control thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:40,932 | INFO     | [data] control thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:41,027 | INFO     | [payload] validate_post thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:41,036 | INFO     | [data] copytool_in thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:41,413 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:41,420 | INFO     | [data] copytool_out thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:41,502 | INFO     | [job] validate thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:41,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 09:06:40] 2025-11-21 14:05:45,909 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:05:49,384 | INFO     | job.realtimelogging is not enabled
[2025-11-21 09:06:40] 2025-11-21 14:05:50,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 09:06:40] 2025-11-21 14:06:08,922 | INFO     | PID=4925 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 09:06:40] 2025-11-21 14:06:08,922 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 09:06:40] 2025-11-21 14:06:08,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 09:06:40] 2025-11-21 14:06:08,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 09:06:40] 2025-11-21 14:06:33,737 | INFO     | [monitor] cgroup control has ended
[2025-11-21 09:06:40] 2025-11-21 14:06:34,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140512170624832)>', '<ExcThread(monitor, started 140510995937024)>']
[2025-11-21 09:06:40] 2025-11-21 14:06:35,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 09:06:40] 2025-11-21 14:06:35,054 | INFO     | [monitor] control thread has ended
[2025-11-21 09:06:40] 2025-11-21 14:06:39,843 | INFO     | all workflow threads have been joined
[2025-11-21 09:06:40] 2025-11-21 14:06:39,844 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 09:06:40] 2025-11-21 14:06:39,844 | INFO     | traces error code: 0
[2025-11-21 09:06:40] 2025-11-21 14:06:39,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 09:06:40] 2025-11-21 14:06:39,962 [wrapper] ==== pilot stdout END ====
[2025-11-21 09:06:40] 2025-11-21 14:06:39,967 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 09:06:40] 2025-11-21 14:06:39,971 [wrapper] pilotpid: 4925
[2025-11-21 09:06:40] 2025-11-21 14:06:39,977 [wrapper] Pilot exit status: 0
[2025-11-21 09:06:40] 2025-11-21 14:06:39,994 [wrapper] pandaids: 6893870201
[2025-11-21 09:06:40] 2025-11-21 14:06:40,046 [wrapper] cleanup supervisor_pilot 29413 4926
[2025-11-21 09:06:40] 2025-11-21 14:06:40,051 [wrapper] Test setup, not cleaning
[2025-11-21 09:06:40] 2025-11-21 14:06:40,056 [wrapper] apfmon messages muted
[2025-11-21 09:06:40] 2025-11-21 14:06:40,061 [wrapper] ==== wrapper stdout END ====
[2025-11-21 09:06:40] 2025-11-21 14:06:40,066 [wrapper] ==== wrapper stderr END ====
[2025-11-21 09:06:40]  *** Error codes and diagnostics ***
[2025-11-21 09:06:40]     "exeErrorCode": 0,
[2025-11-21 09:06:40]     "exeErrorDiag": "",
[2025-11-21 09:06:40]     "pilotErrorCode": 0,
[2025-11-21 09:06:40]     "pilotErrorDiag": "",
[2025-11-21 09:06:40]  *** Listing of results directory ***
[2025-11-21 09:06:40] total 1311380
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 09:50 pilot3.tar.gz
[2025-11-21 09:06:40] -rwx------ 1 boincer umatlas     36292 Nov 20 09:52 runpilot2-wrapper.sh
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 09:52 queuedata.json
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas       100 Nov 20 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 09:06:40] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 20:40 run_atlas
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas       105 Nov 20 20:40 job.xml
[2025-11-21 09:06:40] -rw-r--r-- 2 boincer umatlas 409265979 Nov 20 20:41 EVNT.47493127._000649.pool.root.1
[2025-11-21 09:06:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 20:41 start_atlas.sh
[2025-11-21 09:06:40] drwxrwx--x 2 boincer umatlas      4096 Nov 20 20:41 shared
[2025-11-21 09:06:40] -rw-r--r-- 2 boincer umatlas    590095 Nov 20 20:41 input.tar.gz
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas         0 Nov 20 20:41 boinc_lockfile
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas      2784 Nov 20 20:41 pandaJob.out
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas        57 Nov 20 20:41 setup.sh.local
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas    989817 Nov 20 20:41 agis_schedconf.cvmfs.json
[2025-11-21 09:06:40] drwx------ 5 boincer umatlas      4096 Nov 20 20:41 pilot3
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas       533 Nov 21 08:54 boinc_task_state.xml
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas      5911 Nov 21 09:02 init_data.xml
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas 913395747 Nov 21 09:04 HITS.47523449._006484.pool.root.1
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas        95 Nov 21 09:05 pilot_heartbeat.json
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas      1064 Nov 21 09:05 memory_monitor_summary.json
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas   1526164 Nov 21 09:05 agis_ddmendpoints.agis.ALL.json
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas   1988391 Nov 21 09:05 log.47523449._006484.job.log.tgz.1
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas      8662 Nov 21 09:05 heartbeat.json
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas      4817 Nov 21 09:06 pilotlog.txt
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 09:06 boinc_mmap_file
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas   6140097 Nov 21 09:06 log.47523449._006484.job.log.1
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas        29 Nov 21 09:06 wrapper_checkpoint.txt
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas       353 Nov 21 09:06 output.list
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas       620 Nov 21 09:06 runtime_log
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas   8151040 Nov 21 09:06 result.tar.gz
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas      9338 Nov 21 09:06 runtime_log.err
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas       667 Nov 21 09:06 9wENDmWCLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmi9HKDmiXY2Ko.diag
[2025-11-21 09:06:40] -rw-r--r-- 1 boincer umatlas     21286 Nov 21 09:06 stderr.txt
[2025-11-21 09:06:40] HITS file was successfully produced:
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas 913395747 Nov 21 09:04 shared/HITS.pool.root.1
[2025-11-21 09:06:40]  *** Contents of shared directory: ***
[2025-11-21 09:06:40] total 1300232
[2025-11-21 09:06:40] -rw-r--r-- 2 boincer umatlas 409265979 Nov 20 20:41 ATLAS.root_0
[2025-11-21 09:06:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 20:41 start_atlas.sh
[2025-11-21 09:06:40] -rw-r--r-- 2 boincer umatlas    590095 Nov 20 20:41 input.tar.gz
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas 913395747 Nov 21 09:04 HITS.pool.root.1
[2025-11-21 09:06:40] -rw------- 1 boincer umatlas   8151040 Nov 21 09:06 result.tar.gz
09:06:42 (1084): run_atlas exited; CPU time 341231.641672
09:06:42 (1084): called boinc_finish(0)

</stderr_txt>
]]>

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