Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:28:50 (2122996): wrapper (7.7.26015): starting
04:28:50 (2122996): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 04:28:50] Arguments: --nthreads 4
[2025-11-21 04:28:50] Threads: 4
[2025-11-21 04:28:50] Checking for CVMFS
[2025-11-21 04:28:50] No cvmfs_config command found, will try listing directly
[2025-11-21 04:28:50] CVMFS is ok
[2025-11-21 04:28:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 04:28:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 04:28:50] Further information can be found at the LHC@home message board.
[2025-11-21 04:28:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 04:28:50] Checking for apptainer binary...
[2025-11-21 04:28:50] which: no apptainer in ((null))
[2025-11-21 04:28:50] apptainer is not installed, using version from CVMFS
[2025-11-21 04:28:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 04:28:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-11-21 04:28:50] apptainer works
[2025-11-21 04:28:50] Set ATHENA_PROC_NUMBER=4
[2025-11-21 04:28:50] Set ATHENA_CORE_NUMBER=4
[2025-11-21 04:28:50] Starting ATLAS job with PandaID=6893869773
[2025-11-21 04:28:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:01:26]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:01:26] 2025-11-21 20:57:22,361 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2719.925078125
[2025-11-21 22:01:26] 2025-11-21 20:57:22,374 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6893869773/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,375 | INFO     | extracted standard info from prmon json
[2025-11-21 22:01:26] 2025-11-21 20:57:22,375 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 22:01:26] 2025-11-21 20:57:22,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 22:01:26] 2025-11-21 20:57:22,393 | INFO     | fitting pss+swap vs Time
[2025-11-21 22:01:26] 2025-11-21 20:57:22,394 | INFO     | sum of square deviations: 339823814325.98444
[2025-11-21 22:01:26] 2025-11-21 20:57:22,416 | INFO     | sum of deviations: 791974904480.1344
[2025-11-21 22:01:26] 2025-11-21 20:57:22,417 | INFO     | mean x: 1763727186.0038798
[2025-11-21 22:01:26] 2025-11-21 20:57:22,417 | INFO     | mean y: 2298173.966052376
[2025-11-21 22:01:26] 2025-11-21 20:57:22,417 | INFO     | intersect: -4108148506.8674965
[2025-11-21 22:01:26] 2025-11-21 20:57:22,418 | INFO     | chi2: 4.397271033807849
[2025-11-21 22:01:26] 2025-11-21 20:57:22,420 | INFO     | sum of square deviations: 334903658178.48376
[2025-11-21 22:01:26] 2025-11-21 20:57:22,441 | INFO     | sum of deviations: 1026699533667.6595
[2025-11-21 22:01:26] 2025-11-21 20:57:22,442 | INFO     | mean x: 1763727033.5038986
[2025-11-21 22:01:26] 2025-11-21 20:57:22,442 | INFO     | mean y: 2305443.9600389865
[2025-11-21 22:01:26] 2025-11-21 20:57:22,442 | INFO     | intersect: -5404675574.594375
[2025-11-21 22:01:26] 2025-11-21 20:57:22,443 | INFO     | chi2: 1.946187784764826
[2025-11-21 22:01:26] 2025-11-21 20:57:22,443 | INFO     | current chi2=1.946187784764826 (change=55.74100914403927 %)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,445 | INFO     | sum of square deviations: 330031223855.98785
[2025-11-21 22:01:26] 2025-11-21 20:57:22,460 | INFO     | monitor loop #4513: job 0:6893869773 is in state 'finished'
[2025-11-21 22:01:26] 2025-11-21 20:57:22,467 | INFO     | sum of deviations: 1045932497141.6039
[2025-11-21 22:01:26] 2025-11-21 20:57:22,467 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,467 | INFO     | mean x: 1763726881.0039177
[2025-11-21 22:01:26] 2025-11-21 20:57:22,468 | INFO     | mean y: 2306043.5994123407
[2025-11-21 22:01:26] 2025-11-21 20:57:22,468 | INFO     | intersect: -5587284054.485273
[2025-11-21 22:01:26] 2025-11-21 20:57:22,469 | INFO     | chi2: 1.8786719383603656
[2025-11-21 22:01:26] 2025-11-21 20:57:22,469 | INFO     | current chi2=1.8786719383603656 (change=3.469133191205328 %)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,469 | INFO     | right removable region: 1020
[2025-11-21 22:01:26] 2025-11-21 20:57:22,471 | INFO     | sum of square deviations: 334903655738.48376
[2025-11-21 22:01:26] 2025-11-21 20:57:22,492 | INFO     | sum of deviations: 610572984672.647
[2025-11-21 22:01:26] 2025-11-21 20:57:22,493 | INFO     | mean x: 1763727338.5038986
[2025-11-21 22:01:26] 2025-11-21 20:57:22,493 | INFO     | mean y: 2303786.838206628
[2025-11-21 22:01:26] 2025-11-21 20:57:22,493 | INFO     | intersect: -3213200871.791068
[2025-11-21 22:01:26] 2025-11-21 20:57:22,494 | INFO     | chi2: 2.675965935110942
[2025-11-21 22:01:26] 2025-11-21 20:57:22,494 | INFO     | current chi2=2.675965935110942 (change=39.14484882698554 %)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,496 | INFO     | sum of square deviations: 330031218975.98785
[2025-11-21 22:01:26] 2025-11-21 20:57:22,516 | INFO     | sum of deviations: 595728431333.2666
[2025-11-21 22:01:26] 2025-11-21 20:57:22,517 | INFO     | mean x: 1763727491.0039177
[2025-11-21 22:01:26] 2025-11-21 20:57:22,517 | INFO     | mean y: 2304250.9333986286
[2025-11-21 22:01:26] 2025-11-21 20:57:22,517 | INFO     | intersect: -3181341874.3489738
[2025-11-21 22:01:26] 2025-11-21 20:57:22,518 | INFO     | chi2: 2.6737727418199344
[2025-11-21 22:01:26] 2025-11-21 20:57:22,518 | INFO     | current chi2=2.6737727418199344 (change=0.08195893909676502 %)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,518 | INFO     | left removable region: 20
[2025-11-21 22:01:26] 2025-11-21 20:57:22,520 | INFO     | sum of square deviations: 310082863799.9842
[2025-11-21 22:01:26] 2025-11-21 20:57:22,540 | INFO     | sum of deviations: 838298074496.7437
[2025-11-21 22:01:26] 2025-11-21 20:57:22,540 | INFO     | mean x: 1763727460.504
[2025-11-21 22:01:26] 2025-11-21 20:57:22,540 | INFO     | mean y: 2312458.939
[2025-11-21 22:01:26] 2025-11-21 20:57:22,541 | INFO     | intersect: -4765862460.366586
[2025-11-21 22:01:26] 2025-11-21 20:57:22,542 | INFO     | chi2: 0.1360659263804953
[2025-11-21 22:01:26] 2025-11-21 20:57:22,542 | INFO     | current memory leak: 2.70 B/s (using 1000 data points, chi2=0.14)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,543 | INFO     | could have reported an average CPU frequency of 2699 MHz (38 samples)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,543 | INFO     | ..............................
[2025-11-21 22:01:26] 2025-11-21 20:57:22,543 | INFO     | . Timing measurements:
[2025-11-21 22:01:26] 2025-11-21 20:57:22,544 | INFO     | . get job = 0 s
[2025-11-21 22:01:26] 2025-11-21 20:57:22,544 | INFO     | . initial setup = 1 s
[2025-11-21 22:01:26] 2025-11-21 20:57:22,544 | INFO     | . payload setup = 6 s
[2025-11-21 22:01:26] 2025-11-21 20:57:22,544 | INFO     | . stage-in = 0 s
[2025-11-21 22:01:26] 2025-11-21 20:57:22,544 | INFO     | . payload execution = 62864 s
[2025-11-21 22:01:26] 2025-11-21 20:57:22,544 | INFO     | . stage-out = 2 s
[2025-11-21 22:01:26] 2025-11-21 20:57:22,544 | INFO     | . log creation = 0 s
[2025-11-21 22:01:26] 2025-11-21 20:57:22,544 | INFO     | ..............................
[2025-11-21 22:01:26] 2025-11-21 20:57:22,644 | INFO     | 
[2025-11-21 22:01:26] 2025-11-21 20:57:22,644 | INFO     | job summary report
[2025-11-21 22:01:26] 2025-11-21 20:57:22,644 | INFO     | --------------------------------------------------
[2025-11-21 22:01:26] 2025-11-21 20:57:22,644 | INFO     | PanDA job id: 6893869773
[2025-11-21 22:01:26] 2025-11-21 20:57:22,644 | INFO     | task id: 47523449
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | errors: (none)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | pilot state: finished 
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | transexitcode: 0
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | exeerrorcode: 0
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | exeerrordiag: 
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | exitcode: 0
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | exitmsg: OK
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | cpuconsumptiontime: 248959 s
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | nevents: 1000
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | neventsw: 0
[2025-11-21 22:01:26] 2025-11-21 20:57:22,645 | INFO     | pid: 2136349
[2025-11-21 22:01:26] 2025-11-21 20:57:22,646 | INFO     | pgrp: 2136349
[2025-11-21 22:01:26] 2025-11-21 20:57:22,646 | INFO     | corecount: 4
[2025-11-21 22:01:26] 2025-11-21 20:57:22,646 | INFO     | event service: False
[2025-11-21 22:01:26] 2025-11-21 20:57:22,646 | INFO     | sizes: {0: 2298595, 1: 2298794, 5: 2299056, 11: 2299112, 62874: 2352237, 62877: 2361437, 62883: 2361627}
[2025-11-21 22:01:26] 2025-11-21 20:57:22,646 | INFO     | --------------------------------------------------
[2025-11-21 22:01:26] 2025-11-21 20:57:22,646 | INFO     | 
[2025-11-21 22:01:26] 2025-11-21 20:57:22,646 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-11-21 22:01:26] 2025-11-21 20:57:22,666 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,667 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,667 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,667 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,667 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,667 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,667 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,667 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,667 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,668 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,668 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,668 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,668 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,668 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,668 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,668 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,668 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 22:01:26] 2025-11-21 20:57:22,669 | INFO     | job 6893869773 has completed (purged errors)
[2025-11-21 22:01:26] 2025-11-21 20:57:22,669 | INFO     | overall cleanup function is called
[2025-11-21 22:01:26] 2025-11-21 20:57:23,682 | INFO     | --- collectZombieJob: --- 10, [2136349]
[2025-11-21 22:01:26] 2025-11-21 20:57:23,683 | INFO     | zombie collector waiting for pid 2136349
[2025-11-21 22:01:26] 2025-11-21 20:57:23,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 22:01:26] 2025-11-21 20:57:23,683 | INFO     | collected zombie processes
[2025-11-21 22:01:26] 2025-11-21 20:57:23,683 | INFO     | will attempt to kill all subprocesses of pid=2136349
[2025-11-21 22:01:26] 2025-11-21 20:57:24,088 | INFO     | process IDs to be killed: [2136349] (in reverse order)
[2025-11-21 22:01:26] 2025-11-21 20:57:24,202 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 22:01:26] 2025-11-21 20:57:24,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 22:01:26] 2025-11-21 20:57:24,215 | INFO     | did not find any defunct processes belonging to 2136349
[2025-11-21 22:01:26] 2025-11-21 20:57:24,228 | INFO     | did not find any defunct processes belonging to 2136349
[2025-11-21 22:01:26] 2025-11-21 20:57:24,229 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 22:01:26] 2025-11-21 20:57:24,230 | INFO     | ready for new job
[2025-11-21 22:01:26] 2025-11-21 20:57:24,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 22:01:26] 2025-11-21 20:57:24,236 | INFO     | ***************************************
[2025-11-21 22:01:26] 2025-11-21 20:57:24,237 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 22:01:26] 2025-11-21 20:57:24,237 | INFO     | ***************************************
[2025-11-21 22:01:26] 2025-11-21 20:57:24,237 | INFO     | 
[2025-11-21 22:01:26] 2025-11-21 20:57:24,241 | INFO     | architecture information:
[2025-11-21 22:01:26] 2025-11-21 20:57:24,242 | INFO     | executing command: cat /etc/os-release
[2025-11-21 22:01:26] 2025-11-21 20:57:24,256 | INFO     | cat /etc/os-release:
[2025-11-21 22:01:26] NAME="CentOS Linux"
[2025-11-21 22:01:26] VERSION="7 (Core)"
[2025-11-21 22:01:26] ID="centos"
[2025-11-21 22:01:26] ID_LIKE="rhel fedora"
[2025-11-21 22:01:26] VERSION_ID="7"
[2025-11-21 22:01:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 22:01:26] ANSI_COLOR="0;31"
[2025-11-21 22:01:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 22:01:26] HOME_URL="https://www.centos.org/"
[2025-11-21 22:01:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 22:01:26] 
[2025-11-21 22:01:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 22:01:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 22:01:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 22:01:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 22:01:26] 
[2025-11-21 22:01:26] 2025-11-21 20:57:24,257 | INFO     | ***************************************
[2025-11-21 22:01:26] 2025-11-21 20:57:24,760 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-11-21 22:01:26] 2025-11-21 20:57:24,778 | INFO     | sufficient remaining disk space (664051646464 B)
[2025-11-21 22:01:26] 2025-11-21 20:57:24,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:01:26] 2025-11-21 20:57:24,779 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:01:26] 2025-11-21 20:57:24,779 | INFO     | update_server=False
[2025-11-21 22:01:26] 2025-11-21 20:57:24,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:01:26] 2025-11-21 20:57:24,970 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 22:01:26] 2025-11-21 20:57:24,970 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 22:01:26] 2025-11-21 20:57:24,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:01:26] 2025-11-21 20:57:24,970 | INFO     | will abort loop
[2025-11-21 22:01:26] 2025-11-21 20:57:25,117 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:01:26] 2025-11-21 20:57:25,175 | INFO     | all job control threads have been joined
[2025-11-21 22:01:26] 2025-11-21 20:57:25,663 | INFO     | all data control threads have been joined
[2025-11-21 22:01:26] 2025-11-21 20:57:25,668 | INFO     | all payload control threads have been joined
[2025-11-21 22:01:26] 2025-11-21 20:57:25,783 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:25,846 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:25,975 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:26,038 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:26,176 | INFO     | [job] control thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:26,338 | INFO     | [job] validate thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:26,371 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:26,541 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:26,667 | INFO     | [data] control thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:26,671 | INFO     | [payload] control thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:26,677 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:26,694 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:27,081 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:27,122 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:27,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:01:26] 2025-11-21 20:57:27,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:01:26] 2025-11-21 20:57:28,659 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:31,713 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:01:26] 2025-11-21 20:57:46,605 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:01:26] 2025-11-21 20:57:46,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23075036407616)>', '<ExcThread(monitor, started 23074785138432)>']
[2025-11-21 22:01:26] 2025-11-21 20:57:52,002 | INFO     | all workflow threads have been joined
[2025-11-21 22:01:26] 2025-11-21 20:57:52,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:01:26] 2025-11-21 20:57:52,003 | INFO     | traces error code: 0
[2025-11-21 22:01:26] 2025-11-21 20:57:52,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:01:26] 2025-11-21 20:57:54,394 | INFO     | PID=2127239 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-21 22:01:26] 2025-11-21 20:57:54,395 | INFO     | .. there are 4 such processes running
[2025-11-21 22:01:26] 2025-11-21 20:57:54,396 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:01:26] 2025-11-21 20:57:54,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:01:26] 2025-11-21 20:57:54,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:01:26] 2025-11-21 20:57:54,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:01:26] 2025-11-21 20:57:54,396 | INFO     | [monitor] control thread has ended
[2025-11-21 22:01:26] 2025-11-21 20:57:54,592 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:01:26] 2025-11-21 20:57:54,595 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:01:26] 2025-11-21 20:57:54,598 [wrapper] pilotpid: 2127239
[2025-11-21 22:01:26] 2025-11-21 20:57:54,600 [wrapper] Pilot exit status: 0
[2025-11-21 22:01:26] 2025-11-21 20:57:54,611 [wrapper] pandaids: 6893869773
[2025-11-21 22:01:26] 2025-11-21 20:57:54,687 [wrapper] cleanup supervisor_pilot 3081130 2127240
[2025-11-21 22:01:26] 2025-11-21 20:57:54,690 [wrapper] Test setup, not cleaning
[2025-11-21 22:01:26] 2025-11-21 20:57:54,693 [wrapper] apfmon messages muted
[2025-11-21 22:01:26] 2025-11-21 20:57:54,697 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:01:26] 2025-11-21 20:57:54,699 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:01:26]  *** Error codes and diagnostics ***
[2025-11-21 22:01:26]     "exeErrorCode": 0,
[2025-11-21 22:01:26]     "exeErrorDiag": "",
[2025-11-21 22:01:26]     "pilotErrorCode": 0,
[2025-11-21 22:01:26]     "pilotErrorDiag": "",
[2025-11-21 22:01:26]  *** Listing of results directory ***
[2025-11-21 22:01:26] total 1325720
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:06 pilot3.tar.gz
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:45 queuedata.json
[2025-11-21 22:01:26] -rwx------ 1 boinc boinc     36292 Nov 20 15:45 runpilot2-wrapper.sh
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc       100 Nov 21 02:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:01:26] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 02:52 run_atlas
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc       105 Nov 21 02:52 job.xml
[2025-11-21 22:01:26] -rw-r--r-- 2 boinc boinc 409845828 Nov 21 04:28 EVNT.47493127._000641.pool.root.1
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc      6634 Nov 21 04:28 init_data.xml
[2025-11-21 22:01:26] -rw-r--r-- 2 boinc boinc     15847 Nov 21 04:28 start_atlas.sh
[2025-11-21 22:01:26] drwxrwx--x 2 boinc boinc      4096 Nov 21 04:28 shared
[2025-11-21 22:01:26] -rw-r--r-- 2 boinc boinc    590095 Nov 21 04:28 input.tar.gz
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc         0 Nov 21 04:28 boinc_lockfile
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc      2784 Nov 21 04:28 pandaJob.out
[2025-11-21 22:01:26] -rw------- 1 boinc boinc    989817 Nov 21 04:29 agis_schedconf.cvmfs.json
[2025-11-21 22:01:26] drwx------ 5 boinc boinc      4096 Nov 21 04:29 pilot3
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc       530 Nov 21 21:49 boinc_task_state.xml
[2025-11-21 22:01:26] -rw------- 1 boinc boinc 922680911 Nov 21 21:56 HITS.47523449._006402.pool.root.1
[2025-11-21 22:01:26] -rw------- 1 boinc boinc      1045 Nov 21 21:57 memory_monitor_summary.json
[2025-11-21 22:01:26] -rw------- 1 boinc boinc   1526164 Nov 21 21:57 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:01:26] -rw------- 1 boinc boinc   1748909 Nov 21 21:57 log.47523449._006402.job.log.tgz.1
[2025-11-21 22:01:26] -rw------- 1 boinc boinc      8641 Nov 21 21:57 heartbeat.json
[2025-11-21 22:01:26] -rw------- 1 boinc boinc        95 Nov 21 21:57 pilot_heartbeat.json
[2025-11-21 22:01:26] -rw------- 1 boinc boinc       823 Nov 21 21:57 pilotlog.txt
[2025-11-21 22:01:26] -rw------- 1 boinc boinc   8796522 Nov 21 21:57 log.47523449._006402.job.log.1
[2025-11-21 22:01:26] -rw------- 1 boinc boinc       353 Nov 21 21:57 output.list
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc       620 Nov 21 21:57 runtime_log
[2025-11-21 22:01:26] -rw------- 1 boinc boinc  10567680 Nov 21 21:57 result.tar.gz
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc      9206 Nov 21 21:57 runtime_log.err
[2025-11-21 22:01:26] -rw------- 1 boinc boinc       670 Nov 21 21:57 gDkLDmA6Kg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmS8HKDmUFZLbm.diag
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc        28 Nov 21 22:01 wrapper_checkpoint.txt
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc      8192 Nov 21 22:01 boinc_mmap_file
[2025-11-21 22:01:26] -rw-r--r-- 1 boinc boinc     21111 Nov 21 22:01 stderr.txt
[2025-11-21 22:01:26] HITS file was successfully produced:
[2025-11-21 22:01:26] -rw------- 1 boinc boinc 922680911 Nov 21 21:56 shared/HITS.pool.root.1
[2025-11-21 22:01:26]  *** Contents of shared directory: ***
[2025-11-21 22:01:26] total 1312224
[2025-11-21 22:01:26] -rw-r--r-- 2 boinc boinc 409845828 Nov 21 04:28 ATLAS.root_0
[2025-11-21 22:01:26] -rw-r--r-- 2 boinc boinc     15847 Nov 21 04:28 start_atlas.sh
[2025-11-21 22:01:26] -rw-r--r-- 2 boinc boinc    590095 Nov 21 04:28 input.tar.gz
[2025-11-21 22:01:26] -rw------- 1 boinc boinc 922680911 Nov 21 21:56 HITS.pool.root.1
[2025-11-21 22:01:26] -rw------- 1 boinc boinc  10567680 Nov 21 21:57 result.tar.gz
22:01:28 (2122996): run_atlas exited; CPU time 251203.696142
22:01:28 (2122996): called boinc_finish(0)

</stderr_txt>
]]>

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