Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:37:13 (439531): wrapper (7.7.26015): starting
17:37:13 (439531): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 17:37:13] Arguments: --nthreads 12
[2025-11-20 17:37:13] Threads: 12
[2025-11-20 17:37:13] Checking for CVMFS
[2025-11-20 17:37:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 17:37:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 17:37:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 17:37:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 17:37:14] 2.11.5.0 3591329 20483 223404 153103 3 380 35454971 45568001 16218 130560 0 177347478 99.762 130835230 28003 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-20 17:37:14] CVMFS is ok
[2025-11-20 17:37:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 17:37:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 17:37:14] Further information can be found at the LHC@home message board.
[2025-11-20 17:37:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 17:37:14] Checking for apptainer binary...
[2025-11-20 17:37:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 17:37:14] Running /usr/bin/apptainer --version
[2025-11-20 17:37:14] apptainer version 1.4.1-1.el9
[2025-11-20 17:37:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 17:37:14] wns0096.triumf.lcg
[2025-11-20 17:37:14] apptainer works
[2025-11-20 17:37:14] Set ATHENA_PROC_NUMBER=12
[2025-11-20 17:37:14] Set ATHENA_CORE_NUMBER=12
[2025-11-20 17:37:15] Starting ATLAS job with PandaID=6886165901
[2025-11-20 17:37:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 17:43:51]  *** The last 200 lines of the pilot log: ***
[2025-11-20 17:43:52] 2025-11-21 01:43:16,683 | INFO     | ..............................
[2025-11-20 17:43:52] 2025-11-21 01:43:16,683 | INFO     | . Timing measurements:
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . get job = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . initial setup = 4 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . payload setup = 23 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . stage-in = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . payload execution = 149 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . stage-out = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . log creation = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | ..............................
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6886165901/pilotlog.txt
[2025-11-20 17:43:52] 2025-11-21 01:43:16,764 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 17:43:52] - Log from pilotlog.txt -
[2025-11-20 17:43:52] 2025-11-21 01:43:16,662 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6886165901/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 17:43:52] 2025-11-21 01:43:16,663 | INFO     | extracted standard info from prmon json
[2025-11-20 17:43:52] 2025-11-21 01:43:16,663 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 17:43:52] 2025-11-21 01:43:16,663 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 17:43:52] 2025-11-21 01:43:16,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 17:43:52] 2025-11-21 01:43:16,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 17:43:52] 2025-11-21 01:43:16,664 | WARNING  | wrong length of table data, x=[1763689123.0, 1763689184.0, 1763689245.0], y=[1706.0, 750388.0, 743571.0] (must be same and length>=4)
[2025-11-20 17:43:52] 2025-11-21 01:43:16,683 | INFO     | could have reported an average CPU frequency of 2628 MHz (4 samples)
[2025-11-20 17:43:52] 2025-11-21 01:43:16,683 | INFO     | ..............................
[2025-11-20 17:43:52] 2025-11-21 01:43:16,683 | INFO     | . Timing measurements:
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . get job = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . initial setup = 4 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . payload setup = 23 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . stage-in = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . payload execution = 149 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . stage-out = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . log creation = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | ..............................
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6886165901/pilotlog.txt
[2025-11-20 17:43:52] 2025-11-21 01:43:16,764 | WARNING  | 
[2025-11-20 17:43:52] [begin log extracts]
[2025-11-20 17:43:52] - Log from pilotlog.txt -
[2025-11-20 17:43:52] 2025-11-21 01:43:16,662 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6886165901/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 17:43:52] 2025-11-21 01:43:16,663 | INFO     | extracted standard info from prmon json
[2025-11-20 17:43:52] 2025-11-21 01:43:16,663 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 17:43:52] 2025-11-21 01:43:16,663 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 17:43:52] 2025-11-21 01:43:16,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 17:43:52] 2025-11-21 01:43:16,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 17:43:52] 2025-11-21 01:43:16,664 | WARNING  | wrong length of table data, x=[1763689123.0, 1763689184.0, 1763689245.0], y=[1706.0, 750388.0, 743571.0] (must be same and length>=4)
[2025-11-20 17:43:52] 2025-11-21 01:43:16,683 | INFO     | could have reported an average CPU frequency of 2628 MHz (4 samples)
[2025-11-20 17:43:52] 2025-11-21 01:43:16,683 | INFO     | ..............................
[2025-11-20 17:43:52] 2025-11-21 01:43:16,683 | INFO     | . Timing measurements:
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . get job = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . initial setup = 4 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . payload setup = 23 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . stage-in = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . payload execution = 149 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . stage-out = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | . log creation = 0 s
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | ..............................
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 17:43:52] 2025-11-21 01:43:16,684 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6886165901/pilotlog.txt
[2025-11-20 17:43:52] [end log extracts]
[2025-11-20 17:43:52] 2025-11-21 01:43:16,764 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-20 17:43:52] 2025-11-21 01:43:16,765 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 17:43:52] 2025-11-21 01:43:17,143 | INFO     | time since job start (341s) is within the limit (172800.0s)
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | 
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | job summary report
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | --------------------------------------------------
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | PanDA job id: 6886165901
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | task id: 47450870
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 17:40:59,310 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | pilot state: failed 
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | transexitcode: 65
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | exeerrorcode: 65
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | exitcode: 65
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-20 17:43:52] 2025-11-21 01:43:17,646 | INFO     | cpuconsumptiontime: 63 s
[2025-11-20 17:43:52] 2025-11-21 01:43:17,647 | INFO     | nevents: 0
[2025-11-20 17:43:52] 2025-11-21 01:43:17,647 | INFO     | neventsw: 0
[2025-11-20 17:43:52] 2025-11-21 01:43:17,647 | INFO     | pid: 450776
[2025-11-20 17:43:52] 2025-11-21 01:43:17,647 | INFO     | pgrp: 450776
[2025-11-20 17:43:52] 2025-11-21 01:43:17,647 | INFO     | corecount: 12
[2025-11-20 17:43:52] 2025-11-21 01:43:17,647 | INFO     | event service: False
[2025-11-20 17:43:52] 2025-11-21 01:43:17,647 | INFO     | sizes: {0: 2298827, 1: 2299026, 12: 2299026, 17: 2299316, 23: 2299344, 173: 2323104, 174: 2323208, 176: 2327582, 306: 2327720}
[2025-11-20 17:43:52] 2025-11-21 01:43:17,647 | INFO     | --------------------------------------------------
[2025-11-20 17:43:52] 2025-11-21 01:43:17,647 | INFO     | 
[2025-11-20 17:43:52] 2025-11-21 01:43:17,647 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 17:43:52] 2025-11-21 01:43:17,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,694 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,694 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,694 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | job 6886165901 has completed (purged errors)
[2025-11-20 17:43:52] 2025-11-21 01:43:17,695 | INFO     | overall cleanup function is called
[2025-11-20 17:43:52] 2025-11-21 01:43:18,714 | INFO     | --- collectZombieJob: --- 10, [450776]
[2025-11-20 17:43:52] 2025-11-21 01:43:18,714 | INFO     | zombie collector waiting for pid 450776
[2025-11-20 17:43:52] 2025-11-21 01:43:18,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 17:43:52] 2025-11-21 01:43:18,714 | INFO     | collected zombie processes
[2025-11-20 17:43:52] 2025-11-21 01:43:18,715 | INFO     | will attempt to kill all subprocesses of pid=450776
[2025-11-20 17:43:52] 2025-11-21 01:43:19,064 | INFO     | process IDs to be killed: [450776] (in reverse order)
[2025-11-20 17:43:52] 2025-11-21 01:43:19,138 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 17:43:52] 2025-11-21 01:43:19,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 17:43:52] 2025-11-21 01:43:19,147 | INFO     | did not find any defunct processes belonging to 450776
[2025-11-20 17:43:52] 2025-11-21 01:43:19,171 | INFO     | did not find any defunct processes belonging to 450776
[2025-11-20 17:43:52] 2025-11-21 01:43:19,172 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 17:43:52] 2025-11-21 01:43:19,183 | INFO     | ready for new job
[2025-11-20 17:43:52] 2025-11-21 01:43:19,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 17:43:52] 2025-11-21 01:43:19,185 | INFO     | ***************************************
[2025-11-20 17:43:52] 2025-11-21 01:43:19,185 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 17:43:52] 2025-11-21 01:43:19,185 | INFO     | ***************************************
[2025-11-20 17:43:52] 2025-11-21 01:43:19,185 | INFO     | 
[2025-11-20 17:43:52] 2025-11-21 01:43:19,187 | INFO     | architecture information:
[2025-11-20 17:43:52] 2025-11-21 01:43:19,188 | INFO     | executing command: cat /etc/os-release
[2025-11-20 17:43:52] 2025-11-21 01:43:19,199 | INFO     | cat /etc/os-release:
[2025-11-20 17:43:52] NAME="CentOS Linux"
[2025-11-20 17:43:52] VERSION="7 (Core)"
[2025-11-20 17:43:52] ID="centos"
[2025-11-20 17:43:52] ID_LIKE="rhel fedora"
[2025-11-20 17:43:52] VERSION_ID="7"
[2025-11-20 17:43:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 17:43:52] ANSI_COLOR="0;31"
[2025-11-20 17:43:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 17:43:52] HOME_URL="https://www.centos.org/"
[2025-11-20 17:43:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 17:43:52] 
[2025-11-20 17:43:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 17:43:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 17:43:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 17:43:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 17:43:52] 
[2025-11-20 17:43:52] 2025-11-21 01:43:19,200 | INFO     | ***************************************
[2025-11-20 17:43:52] 2025-11-21 01:43:19,703 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 17:43:52] 2025-11-21 01:43:19,730 | INFO     | sufficient remaining disk space (2026311254016 B)
[2025-11-20 17:43:52] 2025-11-21 01:43:19,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 17:43:52] 2025-11-21 01:43:19,730 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 17:43:52] 2025-11-21 01:43:19,730 | INFO     | update_server=False
[2025-11-20 17:43:52] 2025-11-21 01:43:19,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 17:43:52] 2025-11-21 01:43:19,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 17:43:52] 2025-11-21 01:43:20,076 | INFO     | all data control threads have been joined
[2025-11-20 17:43:52] 2025-11-21 01:43:20,090 | INFO     | all job control threads have been joined
[2025-11-20 17:43:52] 2025-11-21 01:43:20,166 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 17:43:52] 2025-11-21 01:43:20,166 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 17:43:52] 2025-11-21 01:43:20,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:43:52] 2025-11-21 01:43:20,166 | INFO     | will abort loop
[2025-11-20 17:43:52] 2025-11-21 01:43:20,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 17:43:52] 2025-11-21 01:43:20,458 | INFO     | all payload control threads have been joined
[2025-11-20 17:43:52] 2025-11-21 01:43:20,740 | INFO     | [job] retrieve thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:20,816 | INFO     | [payload] failed_post thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:20,849 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:20,924 | INFO     | [data] copytool_in thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:20,927 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:21,082 | INFO     | [data] control thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:21,096 | INFO     | [job] control thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:21,172 | INFO     | [job] job monitor thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:21,348 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:21,464 | INFO     | [payload] control thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:21,607 | INFO     | [job] validate thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:21,658 | INFO     | [payload] validate_post thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:22,159 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:22,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:43:52] 2025-11-21 01:43:22,354 | INFO     | [data] copytool_out thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:23,180 | INFO     | [job] queue monitor thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:23,748 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 17:43:52] 2025-11-21 01:43:36,958 | INFO     | [monitor] cgroup control has ended
[2025-11-20 17:43:52] 2025-11-21 01:43:39,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674068784960)>', '<ExcThread(monitor, started 140672795408128)>']
[2025-11-20 17:43:52] 2025-11-21 01:43:44,056 | INFO     | all workflow threads have been joined
[2025-11-20 17:43:52] 2025-11-21 01:43:44,056 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 17:43:52] 2025-11-21 01:43:44,056 | INFO     | traces error code: 0
[2025-11-20 17:43:52] 2025-11-21 01:43:44,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 17:43:52] 2025-11-21 01:43:50,784 | INFO     | PID=443286 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-20 17:43:52] 2025-11-21 01:43:50,784 | INFO     | .. there are 35 such processes running
[2025-11-20 17:43:52] 2025-11-21 01:43:50,785 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 17:43:52] 2025-11-21 01:43:50,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 17:43:52] 2025-11-21 01:43:50,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 17:43:52] 2025-11-21 01:43:50,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 17:43:52] 2025-11-21 01:43:50,785 | INFO     | [monitor] control thread has ended
[2025-11-20 17:43:52] 2025-11-21 01:43:50,905 [wrapper] ==== pilot stdout END ====
[2025-11-20 17:43:52] 2025-11-21 01:43:50,907 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 17:43:52] 2025-11-21 01:43:50,927 [wrapper] pilotpid: 443286
[2025-11-20 17:43:52] 2025-11-21 01:43:50,937 [wrapper] Pilot exit status: 0
[2025-11-20 17:43:52] 2025-11-21 01:43:50,988 [wrapper] pandaids: 6886165901
[2025-11-20 17:43:52] 2025-11-21 01:43:51,073 [wrapper] cleanup supervisor_pilot  443292 443287
[2025-11-20 17:43:52] 2025-11-21 01:43:51,076 [wrapper] Test setup, not cleaning
[2025-11-20 17:43:52] 2025-11-21 01:43:51,081 [wrapper] apfmon messages muted
[2025-11-20 17:43:52] 2025-11-21 01:43:51,109 [wrapper] ==== wrapper stdout END ====
[2025-11-20 17:43:52] 2025-11-21 01:43:51,135 [wrapper] ==== wrapper stderr END ====
[2025-11-20 17:43:52]  *** Error codes and diagnostics ***
[2025-11-20 17:43:52]     "exeErrorCode": 65,
[2025-11-20 17:43:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-20 17:43:52]     "pilotErrorCode": 1305,
[2025-11-20 17:43:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-20 17:43:52]  *** Listing of results directory ***
[2025-11-20 17:43:52] total 376756
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc    576529 Nov 14 06:24 pilot3.tar.gz
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc      5112 Nov 14 06:29 queuedata.json
[2025-11-20 17:43:52] -rwx------. 1 boinc boinc     36292 Nov 14 06:31 runpilot2-wrapper.sh
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc       100 Nov 20 17:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 17:43:52] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 17:37 run_atlas
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc       105 Nov 20 17:37 job.xml
[2025-11-20 17:43:52] -rw-r--r--. 2 boinc boinc 381562050 Nov 20 17:37 EVNT.14545720._000081.pool.root.1
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc      6595 Nov 20 17:37 init_data.xml
[2025-11-20 17:43:52] -rw-r--r--. 2 boinc boinc     15120 Nov 20 17:37 start_atlas.sh
[2025-11-20 17:43:52] drwxrwx--x. 2 boinc boinc      4096 Nov 20 17:37 shared
[2025-11-20 17:43:52] -rw-r--r--. 2 boinc boinc    590123 Nov 20 17:37 input.tar.gz
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc         0 Nov 20 17:37 boinc_lockfile
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc      2928 Nov 20 17:37 pandaJob.out
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc    989817 Nov 20 17:37 agis_schedconf.cvmfs.json
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc   1526164 Nov 20 17:37 agis_ddmendpoints.agis.ALL.json
[2025-11-20 17:43:52] drwx------. 5 boinc boinc      4096 Nov 20 17:37 pilot3
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc       524 Nov 20 17:40 boinc_task_state.xml
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc      1021 Nov 20 17:41 memory_monitor_summary.json
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc     50556 Nov 20 17:41 log.47450870._000709.job.log.tgz.1
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc      9926 Nov 20 17:43 heartbeat.json
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc        23 Nov 20 17:43 wrapper_checkpoint.txt
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc      8192 Nov 20 17:43 boinc_mmap_file
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc       822 Nov 20 17:43 pilotlog.txt
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc        95 Nov 20 17:43 pilot_heartbeat.json
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc    109769 Nov 20 17:43 log.47450870._000709.job.log.1
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc       186 Nov 20 17:43 output.list
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc       620 Nov 20 17:43 runtime_log
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc    184320 Nov 20 17:43 result.tar.gz
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc      8528 Nov 20 17:43 runtime_log.err
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc       647 Nov 20 17:43 0TtNDmr09d8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWlqMDmm1wHHn.diag
[2025-11-20 17:43:52] -rw-r--r--. 1 boinc boinc     22488 Nov 20 17:43 stderr.txt
[2025-11-20 17:43:52] No HITS result produced
[2025-11-20 17:43:52]  *** Contents of shared directory: ***
[2025-11-20 17:43:52] total 373400
[2025-11-20 17:43:52] -rw-r--r--. 2 boinc boinc 381562050 Nov 20 17:37 ATLAS.root_0
[2025-11-20 17:43:52] -rw-r--r--. 2 boinc boinc     15120 Nov 20 17:37 start_atlas.sh
[2025-11-20 17:43:52] -rw-r--r--. 2 boinc boinc    590123 Nov 20 17:37 input.tar.gz
[2025-11-20 17:43:52] -rw-------. 1 boinc boinc    184320 Nov 20 17:43 result.tar.gz
17:43:53 (439531): run_atlas exited; CPU time 64.734257
17:43:53 (439531): called boinc_finish(0)

</stderr_txt>
]]>

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