Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:29:27 (4053043): wrapper (7.7.26015): starting
06:29:27 (4053043): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 06:29:27] Arguments: --nthreads 4
[2025-11-26 06:29:27] Threads: 4
[2025-11-26 06:29:27] Checking for CVMFS
[2025-11-26 06:29:27] No cvmfs_config command found, will try listing directly
[2025-11-26 06:29:27] CVMFS is ok
[2025-11-26 06:29:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 06:29:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 06:29:27] Further information can be found at the LHC@home message board.
[2025-11-26 06:29:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:29:27] Checking for apptainer binary...
[2025-11-26 06:29:27] which: no apptainer in ((null))
[2025-11-26 06:29:27] apptainer is not installed, using version from CVMFS
[2025-11-26 06:29:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:29:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-11-26 06:29:27] apptainer works
[2025-11-26 06:29:27] Set ATHENA_PROC_NUMBER=4
[2025-11-26 06:29:27] Set ATHENA_CORE_NUMBER=4
[2025-11-26 06:29:27] Starting ATLAS job with PandaID=6893867550
[2025-11-26 06:29:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:07:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:07:21] 2025-11-26 23:04:38,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:07:21] 2025-11-26 23:04:38,847 | INFO     | time since job start (63301s) is within the limit (172800.0s)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,135 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 00:07:21] 2025-11-26 23:04:39,146 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2651.018218749999
[2025-11-27 00:07:21] 2025-11-26 23:04:39,158 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6893867550/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,159 | INFO     | extracted standard info from prmon json
[2025-11-27 00:07:21] 2025-11-26 23:04:39,159 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:07:21] 2025-11-26 23:04:39,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:07:21] 2025-11-26 23:04:39,177 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:07:21] 2025-11-26 23:04:39,179 | INFO     | sum of square deviations: 346792601625.15204
[2025-11-27 00:07:21] 2025-11-26 23:04:39,203 | INFO     | sum of deviations: 889797264777.2559
[2025-11-27 00:07:21] 2025-11-26 23:04:39,203 | INFO     | mean x: 1764166632.5183043
[2025-11-27 00:07:21] 2025-11-26 23:04:39,203 | INFO     | mean y: 2303271.486512524
[2025-11-27 00:07:21] 2025-11-26 23:04:39,203 | INFO     | intersect: -4524179233.820312
[2025-11-27 00:07:21] 2025-11-26 23:04:39,205 | INFO     | chi2: 4.50584743987409
[2025-11-27 00:07:21] 2025-11-26 23:04:39,206 | INFO     | sum of square deviations: 341805248792.6503
[2025-11-27 00:07:21] 2025-11-26 23:04:39,228 | INFO     | sum of deviations: 1145440964058.7134
[2025-11-27 00:07:21] 2025-11-26 23:04:39,229 | INFO     | mean x: 1764166480.018393
[2025-11-27 00:07:21] 2025-11-26 23:04:39,229 | INFO     | mean y: 2311087.225556631
[2025-11-27 00:07:21] 2025-11-26 23:04:39,229 | INFO     | intersect: -5909676984.257172
[2025-11-27 00:07:21] 2025-11-26 23:04:39,230 | INFO     | chi2: 1.8799116207068398
[2025-11-27 00:07:21] 2025-11-26 23:04:39,230 | INFO     | current chi2=1.8799116207068398 (change=58.278400549678366 %)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,232 | INFO     | sum of square deviations: 336865943372.6485
[2025-11-27 00:07:21] 2025-11-26 23:04:39,254 | INFO     | sum of deviations: 1169157251957.7156
[2025-11-27 00:07:21] 2025-11-26 23:04:39,254 | INFO     | mean x: 1764166327.5184824
[2025-11-27 00:07:21] 2025-11-26 23:04:39,254 | INFO     | mean y: 2311816.3307392998
[2025-11-27 00:07:21] 2025-11-26 23:04:39,254 | INFO     | intersect: -6120562567.548917
[2025-11-27 00:07:21] 2025-11-26 23:04:39,256 | INFO     | chi2: 1.7759820469072627
[2025-11-27 00:07:21] 2025-11-26 23:04:39,256 | INFO     | current chi2=1.7759820469072627 (change=5.528428712010407 %)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,256 | INFO     | right removable region: 1027
[2025-11-27 00:07:21] 2025-11-26 23:04:39,257 | INFO     | sum of square deviations: 341805237202.6503
[2025-11-27 00:07:21] 2025-11-26 23:04:39,279 | INFO     | sum of deviations: 711714176202.6487
[2025-11-27 00:07:21] 2025-11-26 23:04:39,280 | INFO     | mean x: 1764166785.018393
[2025-11-27 00:07:21] 2025-11-26 23:04:39,280 | INFO     | mean y: 2308707.4394966117
[2025-11-27 00:07:21] 2025-11-26 23:04:39,280 | INFO     | intersect: -3671077108.2934203
[2025-11-27 00:07:21] 2025-11-26 23:04:39,281 | INFO     | chi2: 2.876528458545694
[2025-11-27 00:07:21] 2025-11-26 23:04:39,282 | INFO     | current chi2=2.876528458545694 (change=36.160100914866426 %)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,283 | INFO     | sum of square deviations: 336865920192.6485
[2025-11-27 00:07:21] 2025-11-26 23:04:39,305 | INFO     | sum of deviations: 698016695920.6633
[2025-11-27 00:07:21] 2025-11-26 23:04:39,305 | INFO     | mean x: 1764166937.5184824
[2025-11-27 00:07:21] 2025-11-26 23:04:39,305 | INFO     | mean y: 2309129.8861867706
[2025-11-27 00:07:21] 2025-11-26 23:04:39,305 | INFO     | intersect: -3653204541.7695785
[2025-11-27 00:07:21] 2025-11-26 23:04:39,306 | INFO     | chi2: 2.875323887137738
[2025-11-27 00:07:21] 2025-11-26 23:04:39,307 | INFO     | current chi2=2.875323887137738 (change=0.04187587313372345 %)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,307 | INFO     | left removable region: 20
[2025-11-27 00:07:21] 2025-11-26 23:04:39,308 | INFO     | sum of square deviations: 316640243522.6418
[2025-11-27 00:07:21] 2025-11-26 23:04:39,329 | INFO     | sum of deviations: 970621536829.0747
[2025-11-27 00:07:21] 2025-11-26 23:04:39,329 | INFO     | mean x: 1764166907.018868
[2025-11-27 00:07:21] 2025-11-26 23:04:39,329 | INFO     | mean y: 2317825.0486593843
[2025-11-27 00:07:21] 2025-11-26 23:04:39,330 | INFO     | intersect: -5405517816.636621
[2025-11-27 00:07:21] 2025-11-26 23:04:39,331 | INFO     | chi2: 0.11809867113122602
[2025-11-27 00:07:21] 2025-11-26 23:04:39,331 | INFO     | current memory leak: 3.07 B/s (using 1007 data points, chi2=0.12)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,332 | INFO     | could have reported an average CPU frequency of 2690 MHz (38 samples)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,332 | INFO     | ..............................
[2025-11-27 00:07:21] 2025-11-26 23:04:39,332 | INFO     | . Timing measurements:
[2025-11-27 00:07:21] 2025-11-26 23:04:39,333 | INFO     | . get job = 0 s
[2025-11-27 00:07:21] 2025-11-26 23:04:39,333 | INFO     | . initial setup = 1 s
[2025-11-27 00:07:21] 2025-11-26 23:04:39,333 | INFO     | . payload setup = 6 s
[2025-11-27 00:07:21] 2025-11-26 23:04:39,333 | INFO     | . stage-in = 0 s
[2025-11-27 00:07:21] 2025-11-26 23:04:39,333 | INFO     | . payload execution = 63263 s
[2025-11-27 00:07:21] 2025-11-26 23:04:39,333 | INFO     | . stage-out = 2 s
[2025-11-27 00:07:21] 2025-11-26 23:04:39,333 | INFO     | . log creation = 0 s
[2025-11-27 00:07:21] 2025-11-26 23:04:39,333 | INFO     | ..............................
[2025-11-27 00:07:21] 2025-11-26 23:04:39,756 | INFO     | 
[2025-11-27 00:07:21] 2025-11-26 23:04:39,756 | INFO     | job summary report
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | --------------------------------------------------
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | PanDA job id: 6893867550
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | task id: 47523449
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | errors: (none)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | pilot state: finished 
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | transexitcode: 0
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | exeerrorcode: 0
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | exeerrordiag: 
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | exitcode: 0
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | exitmsg: OK
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | cpuconsumptiontime: 250201 s
[2025-11-27 00:07:21] 2025-11-26 23:04:39,757 | INFO     | nevents: 1000
[2025-11-27 00:07:21] 2025-11-26 23:04:39,758 | INFO     | neventsw: 0
[2025-11-27 00:07:21] 2025-11-26 23:04:39,758 | INFO     | pid: 4063763
[2025-11-27 00:07:21] 2025-11-26 23:04:39,758 | INFO     | pgrp: 4063763
[2025-11-27 00:07:21] 2025-11-26 23:04:39,758 | INFO     | corecount: 4
[2025-11-27 00:07:21] 2025-11-26 23:04:39,758 | INFO     | event service: False
[2025-11-27 00:07:21] 2025-11-26 23:04:39,758 | INFO     | sizes: {0: 2284149, 1: 2284348, 5: 2284610, 11: 2284666, 63273: 2338868, 63276: 2347884, 63278: 2348068, 63287: 2348314}
[2025-11-27 00:07:21] 2025-11-26 23:04:39,758 | INFO     | --------------------------------------------------
[2025-11-27 00:07:21] 2025-11-26 23:04:39,758 | INFO     | 
[2025-11-27 00:07:21] 2025-11-26 23:04:39,758 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-11-27 00:07:21] 2025-11-26 23:04:39,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,779 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,779 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,779 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,780 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:07:21] 2025-11-26 23:04:39,781 | INFO     | job 6893867550 has completed (purged errors)
[2025-11-27 00:07:21] 2025-11-26 23:04:39,781 | INFO     | overall cleanup function is called
[2025-11-27 00:07:21] 2025-11-26 23:04:40,794 | INFO     | --- collectZombieJob: --- 10, [4063763]
[2025-11-27 00:07:21] 2025-11-26 23:04:40,794 | INFO     | zombie collector waiting for pid 4063763
[2025-11-27 00:07:21] 2025-11-26 23:04:40,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:07:21] 2025-11-26 23:04:40,795 | INFO     | collected zombie processes
[2025-11-27 00:07:21] 2025-11-26 23:04:40,795 | INFO     | will attempt to kill all subprocesses of pid=4063763
[2025-11-27 00:07:21] 2025-11-26 23:04:41,208 | INFO     | process IDs to be killed: [4063763] (in reverse order)
[2025-11-27 00:07:21] 2025-11-26 23:04:41,325 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:07:21] 2025-11-26 23:04:41,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:07:21] 2025-11-26 23:04:41,338 | INFO     | did not find any defunct processes belonging to 4063763
[2025-11-27 00:07:21] 2025-11-26 23:04:41,352 | INFO     | did not find any defunct processes belonging to 4063763
[2025-11-27 00:07:21] 2025-11-26 23:04:41,353 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:07:21] 2025-11-26 23:04:41,354 | INFO     | ready for new job
[2025-11-27 00:07:21] 2025-11-26 23:04:41,354 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:07:21] 2025-11-26 23:04:41,359 | INFO     | ***************************************
[2025-11-27 00:07:21] 2025-11-26 23:04:41,360 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:07:21] 2025-11-26 23:04:41,360 | INFO     | ***************************************
[2025-11-27 00:07:21] 2025-11-26 23:04:41,360 | INFO     | 
[2025-11-27 00:07:21] 2025-11-26 23:04:41,364 | INFO     | architecture information:
[2025-11-27 00:07:21] 2025-11-26 23:04:41,364 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:07:21] 2025-11-26 23:04:41,380 | INFO     | cat /etc/os-release:
[2025-11-27 00:07:21] NAME="CentOS Linux"
[2025-11-27 00:07:21] VERSION="7 (Core)"
[2025-11-27 00:07:21] ID="centos"
[2025-11-27 00:07:21] ID_LIKE="rhel fedora"
[2025-11-27 00:07:21] VERSION_ID="7"
[2025-11-27 00:07:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:07:21] ANSI_COLOR="0;31"
[2025-11-27 00:07:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:07:21] HOME_URL="https://www.centos.org/"
[2025-11-27 00:07:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:07:21] 
[2025-11-27 00:07:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:07:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:07:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:07:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:07:21] 
[2025-11-27 00:07:21] 2025-11-26 23:04:41,381 | INFO     | ***************************************
[2025-11-27 00:07:21] 2025-11-26 23:04:41,883 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-11-27 00:07:21] 2025-11-26 23:04:41,899 | INFO     | sufficient remaining disk space (672273530880 B)
[2025-11-27 00:07:21] 2025-11-26 23:04:41,900 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:07:21] 2025-11-26 23:04:41,900 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:07:21] 2025-11-26 23:04:41,900 | INFO     | update_server=False
[2025-11-27 00:07:21] 2025-11-26 23:04:41,900 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:07:21] 2025-11-26 23:04:41,901 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:07:21] 2025-11-26 23:04:42,109 | INFO     | all job control threads have been joined
[2025-11-27 00:07:21] 2025-11-26 23:04:42,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:07:21] 2025-11-26 23:04:42,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:07:21] 2025-11-26 23:04:42,291 | INFO     | aborting loop
[2025-11-27 00:07:21] 2025-11-26 23:04:42,463 | INFO     | all data control threads have been joined
[2025-11-27 00:07:21] 2025-11-26 23:04:42,586 | INFO     | all payload control threads have been joined
[2025-11-27 00:07:21] 2025-11-26 23:04:42,902 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:43,114 | INFO     | [job] control thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:43,195 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:43,285 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:43,297 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:43,469 | INFO     | [data] control thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:43,592 | INFO     | [payload] control thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:43,645 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:43,782 | INFO     | [job] validate thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:43,801 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:43,851 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:44,291 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:44,409 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:44,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:07:21] 2025-11-26 23:04:45,446 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:45,907 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:04:52,133 | INFO     | job.realtimelogging is not enabled
[2025-11-27 00:07:21] 2025-11-26 23:04:53,138 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:07:21] 2025-11-26 23:05:12,439 | INFO     | PID=4056834 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 00:07:21] 2025-11-26 23:05:12,439 | INFO     | .. there are 3 such processes running
[2025-11-27 00:07:21] 2025-11-26 23:05:12,440 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:07:21] 2025-11-26 23:05:12,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:07:21] 2025-11-26 23:05:12,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:07:21] 2025-11-26 23:05:21,285 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:07:21] 2025-11-26 23:05:22,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22645013743424)>', '<ExcThread(monitor, started 22644772529920)>']
[2025-11-27 00:07:21] 2025-11-26 23:05:22,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:07:21] 2025-11-26 23:05:22,483 | INFO     | [monitor] control thread has ended
[2025-11-27 00:07:21] 2025-11-26 23:05:27,029 | INFO     | all workflow threads have been joined
[2025-11-27 00:07:21] 2025-11-26 23:05:27,030 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:07:21] 2025-11-26 23:05:27,030 | INFO     | traces error code: 0
[2025-11-27 00:07:21] 2025-11-26 23:05:27,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:07:21] 2025-11-26 23:05:27,189 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:07:21] 2025-11-26 23:05:27,192 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:07:21] 2025-11-26 23:05:27,194 [wrapper] pilotpid: 4056834
[2025-11-27 00:07:21] 2025-11-26 23:05:27,197 [wrapper] Pilot exit status: 0
[2025-11-27 00:07:21] 2025-11-26 23:05:27,207 [wrapper] pandaids: 6893867550
[2025-11-27 00:07:21] 2025-11-26 23:05:27,285 [wrapper] cleanup supervisor_pilot  692889 4056835
[2025-11-27 00:07:21] 2025-11-26 23:05:27,288 [wrapper] Test setup, not cleaning
[2025-11-27 00:07:21] 2025-11-26 23:05:27,290 [wrapper] apfmon messages muted
[2025-11-27 00:07:21] 2025-11-26 23:05:27,293 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:07:21] 2025-11-26 23:05:27,297 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:07:21]  *** Error codes and diagnostics ***
[2025-11-27 00:07:21]     "exeErrorCode": 0,
[2025-11-27 00:07:21]     "exeErrorDiag": "",
[2025-11-27 00:07:21]     "pilotErrorCode": 0,
[2025-11-27 00:07:21]     "pilotErrorDiag": "",
[2025-11-27 00:07:21]  *** Listing of results directory ***
[2025-11-27 00:07:21] total 1326596
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:06 pilot3.tar.gz
[2025-11-27 00:07:21] -rwx------ 1 boinc boinc     36292 Nov 20 15:33 runpilot2-wrapper.sh
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:33 queuedata.json
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc       100 Nov 26 06:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:07:21] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 06:29 run_atlas
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc       105 Nov 26 06:29 job.xml
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc      6635 Nov 26 06:29 init_data.xml
[2025-11-27 00:07:21] -rw-r--r-- 2 boinc boinc 410376236 Nov 26 06:29 EVNT.47493127._000621.pool.root.1
[2025-11-27 00:07:21] drwxrwx--x 2 boinc boinc      4096 Nov 26 06:29 shared
[2025-11-27 00:07:21] -rw-r--r-- 2 boinc boinc    590091 Nov 26 06:29 input.tar.gz
[2025-11-27 00:07:21] -rw-r--r-- 2 boinc boinc     15847 Nov 26 06:29 start_atlas.sh
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc         0 Nov 26 06:29 boinc_lockfile
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc      2783 Nov 26 06:29 pandaJob.out
[2025-11-27 00:07:21] -rw------- 1 boinc boinc    991877 Nov 26 06:29 agis_schedconf.cvmfs.json
[2025-11-27 00:07:21] drwx------ 5 boinc boinc      4096 Nov 26 06:29 pilot3
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc       532 Nov 26 23:56 boinc_task_state.xml
[2025-11-27 00:07:21] -rw------- 1 boinc boinc 922920346 Nov 27 00:03 HITS.47523449._006201.pool.root.1
[2025-11-27 00:07:21] -rw------- 1 boinc boinc      1046 Nov 27 00:04 memory_monitor_summary.json
[2025-11-27 00:07:21] -rw------- 1 boinc boinc   1516240 Nov 27 00:04 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:07:21] -rw------- 1 boinc boinc   1755866 Nov 27 00:04 log.47523449._006201.job.log.tgz.1
[2025-11-27 00:07:21] -rw------- 1 boinc boinc      8629 Nov 27 00:04 heartbeat.json
[2025-11-27 00:07:21] -rw------- 1 boinc boinc        95 Nov 27 00:05 pilot_heartbeat.json
[2025-11-27 00:07:21] -rw------- 1 boinc boinc      4905 Nov 27 00:05 pilotlog.txt
[2025-11-27 00:07:21] -rw------- 1 boinc boinc   8852534 Nov 27 00:05 log.47523449._006201.job.log.1
[2025-11-27 00:07:21] -rw------- 1 boinc boinc       353 Nov 27 00:05 output.list
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc       620 Nov 27 00:05 runtime_log
[2025-11-27 00:07:21] -rw------- 1 boinc boinc  10629120 Nov 27 00:05 result.tar.gz
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc      9206 Nov 27 00:05 runtime_log.err
[2025-11-27 00:07:21] -rw------- 1 boinc boinc       670 Nov 27 00:05 3ayKDmYuKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm05HKDmhWQHGm.diag
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc        28 Nov 27 00:07 wrapper_checkpoint.txt
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc      8192 Nov 27 00:07 boinc_mmap_file
[2025-11-27 00:07:21] -rw-r--r-- 1 boinc boinc     21098 Nov 27 00:07 stderr.txt
[2025-11-27 00:07:21] HITS file was successfully produced:
[2025-11-27 00:07:21] -rw------- 1 boinc boinc 922920346 Nov 27 00:03 shared/HITS.pool.root.1
[2025-11-27 00:07:21]  *** Contents of shared directory: ***
[2025-11-27 00:07:21] total 1313036
[2025-11-27 00:07:21] -rw-r--r-- 2 boinc boinc 410376236 Nov 26 06:29 ATLAS.root_0
[2025-11-27 00:07:21] -rw-r--r-- 2 boinc boinc    590091 Nov 26 06:29 input.tar.gz
[2025-11-27 00:07:21] -rw-r--r-- 2 boinc boinc     15847 Nov 26 06:29 start_atlas.sh
[2025-11-27 00:07:21] -rw------- 1 boinc boinc 922920346 Nov 27 00:03 HITS.pool.root.1
[2025-11-27 00:07:21] -rw------- 1 boinc boinc  10629120 Nov 27 00:05 result.tar.gz
00:07:22 (4053043): run_atlas exited; CPU time 252574.918397
00:07:22 (4053043): called boinc_finish(0)

</stderr_txt>
]]>

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