Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:48 (1751361): wrapper (7.7.26015): starting
00:03:48 (1751361): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:03:48] Arguments: --nthreads 9
[2025-11-21 00:03:48] Threads: 9
[2025-11-21 00:03:48] Checking for CVMFS
[2025-11-21 00:03:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:03:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:03:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:03:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:03:48] 2.13.2.0 9369 25256 164816 153108 3 107 28991551 39288833 5536 16776704 0 13671462 99.543 13158660 34592 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:03:48] CVMFS is ok
[2025-11-21 00:03:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:03:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:03:48] Further information can be found at the LHC@home message board.
[2025-11-21 00:03:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:03:48] Checking for apptainer binary...
[2025-11-21 00:03:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:03:48] Running /usr/bin/apptainer --version
[2025-11-21 00:03:48] apptainer version 1.4.4-1.el9
[2025-11-21 00:03:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:03:48] c-210-23.aglt2.org
[2025-11-21 00:03:48] apptainer works
[2025-11-21 00:03:48] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:03:48] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:03:49] Starting ATLAS job with PandaID=6893867587
[2025-11-21 00:03:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 16:47:08]  *** The last 200 lines of the pilot log: ***
[2025-11-21 16:47:09] 2025-11-21 21:46:11,876 | INFO     | .. there are 10 such processes running
[2025-11-21 16:47:09] 2025-11-21 21:46:12,877 | INFO     | time since job start (60125s) is within the limit (172800.0s)
[2025-11-21 16:47:09] 2025-11-21 21:46:13,199 | INFO     | monitor loop #3974: job 0:6893867587 is in state 'finished'
[2025-11-21 16:47:09] 2025-11-21 21:46:13,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 16:47:09] 2025-11-21 21:46:14,884 | INFO     | time since job start (60127s) is within the limit (172800.0s)
[2025-11-21 16:47:09] 2025-11-21 21:46:15,732 | INFO     | monitor loop #3975: job 0:6893867587 is in state 'finished'
[2025-11-21 16:47:09] 2025-11-21 21:46:15,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 16:47:09] 2025-11-21 21:46:16,891 | INFO     | time since job start (60129s) is within the limit (172800.0s)
[2025-11-21 16:47:09] 2025-11-21 21:46:18,237 | INFO     | monitor loop #3976: job 0:6893867587 is in state 'finished'
[2025-11-21 16:47:09] 2025-11-21 21:46:18,237 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 16:47:09] 2025-11-21 21:46:18,898 | INFO     | time since job start (60131s) is within the limit (172800.0s)
[2025-11-21 16:47:09] 2025-11-21 21:46:20,770 | INFO     | monitor loop #3977: job 0:6893867587 is in state 'finished'
[2025-11-21 16:47:09] 2025-11-21 21:46:20,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 16:47:09] 2025-11-21 21:46:20,905 | INFO     | time since job start (60133s) is within the limit (172800.0s)
[2025-11-21 16:47:09] 2025-11-21 21:46:22,914 | INFO     | time since job start (60135s) is within the limit (172800.0s)
[2025-11-21 16:47:09] 2025-11-21 21:46:23,036 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 16:47:09] 2025-11-21 21:46:23,091 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0489
[2025-11-21 16:47:09] 2025-11-21 21:46:23,197 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6893867587/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 16:47:09] 2025-11-21 21:46:23,198 | INFO     | extracted standard info from prmon json
[2025-11-21 16:47:09] 2025-11-21 21:46:23,198 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 16:47:09] 2025-11-21 21:46:23,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 16:47:09] 2025-11-21 21:46:23,444 | INFO     | fitting pss+swap vs Time
[2025-11-21 16:47:09] 2025-11-21 21:46:23,491 | INFO     | monitor loop #3978: job 0:6893867587 is in state 'finished'
[2025-11-21 16:47:09] 2025-11-21 21:46:23,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 16:47:09] 2025-11-21 21:46:23,494 | INFO     | sum of square deviations: 294649133795.73566
[2025-11-21 16:47:09] 2025-11-21 21:46:23,622 | INFO     | sum of deviations: 911180344335.9613
[2025-11-21 16:47:09] 2025-11-21 21:46:23,622 | INFO     | mean x: 1763731508.4547305
[2025-11-21 16:47:09] 2025-11-21 21:46:23,622 | INFO     | mean y: 3003354.7070193286
[2025-11-21 16:47:09] 2025-11-21 21:46:23,622 | INFO     | intersect: -5451204035.918015
[2025-11-21 16:47:09] 2025-11-21 21:46:23,624 | INFO     | chi2: 28.296529965430206
[2025-11-21 16:47:09] 2025-11-21 21:46:23,625 | INFO     | sum of square deviations: 290178421452.1398
[2025-11-21 16:47:09] 2025-11-21 21:46:23,676 | INFO     | sum of deviations: 1330446159308.837
[2025-11-21 16:47:09] 2025-11-21 21:46:23,677 | INFO     | mean x: 1763731355.9703476
[2025-11-21 16:47:09] 2025-11-21 21:46:23,677 | INFO     | mean y: 3017654.6840490797
[2025-11-21 16:47:09] 2025-11-21 21:46:23,677 | INFO     | intersect: -8083557483.67558
[2025-11-21 16:47:09] 2025-11-21 21:46:23,683 | INFO     | chi2: 23.260612827839807
[2025-11-21 16:47:09] 2025-11-21 21:46:23,684 | INFO     | current chi2=23.260612827839807 (change=17.796942394501254 %)
[2025-11-21 16:47:09] 2025-11-21 21:46:23,684 | INFO     | right removable region: 977
[2025-11-21 16:47:09] 2025-11-21 21:46:23,685 | INFO     | sum of square deviations: 290176469928.25494
[2025-11-21 16:47:09] 2025-11-21 21:46:23,737 | INFO     | sum of deviations: 517460417567.44556
[2025-11-21 16:47:09] 2025-11-21 21:46:23,738 | INFO     | mean x: 1763731660.9723926
[2025-11-21 16:47:09] 2025-11-21 21:46:23,738 | INFO     | mean y: 3016778.164621677
[2025-11-21 16:47:09] 2025-11-21 21:46:23,738 | INFO     | intersect: -3142177323.8566437
[2025-11-21 16:47:09] 2025-11-21 21:46:23,739 | INFO     | chi2: 24.707399715423467
[2025-11-21 16:47:09] 2025-11-21 21:46:23,739 | INFO     | current chi2=24.707399715423467 (change=12.683994307399423 %)
[2025-11-21 16:47:09] 2025-11-21 21:46:23,739 | INFO     | left removable region: 10
[2025-11-21 16:47:09] 2025-11-21 21:46:23,741 | INFO     | sum of square deviations: 280498830163.7064
[2025-11-21 16:47:09] 2025-11-21 21:46:23,792 | INFO     | sum of deviations: 814413483420.5461
[2025-11-21 16:47:09] 2025-11-21 21:46:23,792 | INFO     | mean x: 1763731630.5067217
[2025-11-21 16:47:09] 2025-11-21 21:46:23,793 | INFO     | mean y: 3041455.531540848
[2025-11-21 16:47:09] 2025-11-21 21:46:23,793 | INFO     | intersect: -5117859833.723942
[2025-11-21 16:47:09] 2025-11-21 21:46:23,794 | INFO     | chi2: 17.456596196331354
[2025-11-21 16:47:09] 2025-11-21 21:46:23,798 | INFO     | current memory leak: 2.90 B/s (using 967 data points, chi2=17.46)
[2025-11-21 16:47:09] 2025-11-21 21:46:23,799 | INFO     | could have reported an average CPU frequency of 2600 MHz (36 samples)
[2025-11-21 16:47:09] 2025-11-21 21:46:23,800 | INFO     | ..............................
[2025-11-21 16:47:09] 2025-11-21 21:46:23,800 | INFO     | . Timing measurements:
[2025-11-21 16:47:09] 2025-11-21 21:46:23,800 | INFO     | . get job = 0 s
[2025-11-21 16:47:09] 2025-11-21 21:46:23,800 | INFO     | . initial setup = 3 s
[2025-11-21 16:47:09] 2025-11-21 21:46:23,800 | INFO     | . payload setup = 41 s
[2025-11-21 16:47:09] 2025-11-21 21:46:23,800 | INFO     | . stage-in = 0 s
[2025-11-21 16:47:09] 2025-11-21 21:46:23,800 | INFO     | . payload execution = 59936 s
[2025-11-21 16:47:09] 2025-11-21 21:46:23,800 | INFO     | . stage-out = 27 s
[2025-11-21 16:47:09] 2025-11-21 21:46:23,800 | INFO     | . log creation = 4 s
[2025-11-21 16:47:09] 2025-11-21 21:46:23,800 | INFO     | ..............................
[2025-11-21 16:47:09] 2025-11-21 21:46:24,323 | INFO     | 
[2025-11-21 16:47:09] 2025-11-21 21:46:24,324 | INFO     | job summary report
[2025-11-21 16:47:09] 2025-11-21 21:46:24,361 | INFO     | --------------------------------------------------
[2025-11-21 16:47:09] 2025-11-21 21:46:24,362 | INFO     | PanDA job id: 6893867587
[2025-11-21 16:47:09] 2025-11-21 21:46:24,362 | INFO     | task id: 47523449
[2025-11-21 16:47:09] 2025-11-21 21:46:24,362 | INFO     | errors: (none)
[2025-11-21 16:47:09] 2025-11-21 21:46:24,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 16:47:09] 2025-11-21 21:46:24,362 | INFO     | pilot state: finished 
[2025-11-21 16:47:09] 2025-11-21 21:46:24,362 | INFO     | transexitcode: 0
[2025-11-21 16:47:09] 2025-11-21 21:46:24,362 | INFO     | exeerrorcode: 0
[2025-11-21 16:47:09] 2025-11-21 21:46:24,362 | INFO     | exeerrordiag: 
[2025-11-21 16:47:09] 2025-11-21 21:46:24,363 | INFO     | exitcode: 0
[2025-11-21 16:47:09] 2025-11-21 21:46:24,363 | INFO     | exitmsg: OK
[2025-11-21 16:47:09] 2025-11-21 21:46:24,363 | INFO     | cpuconsumptiontime: 295619 s
[2025-11-21 16:47:09] 2025-11-21 21:46:24,363 | INFO     | nevents: 1000
[2025-11-21 16:47:09] 2025-11-21 21:46:24,363 | INFO     | neventsw: 0
[2025-11-21 16:47:09] 2025-11-21 21:46:24,363 | INFO     | pid: 1762672
[2025-11-21 16:47:09] 2025-11-21 21:46:24,363 | INFO     | pgrp: 1762672
[2025-11-21 16:47:09] 2025-11-21 21:46:24,363 | INFO     | corecount: 9
[2025-11-21 16:47:09] 2025-11-21 21:46:24,363 | INFO     | event service: False
[2025-11-21 16:47:09] 2025-11-21 21:46:24,364 | INFO     | sizes: {0: 2298636, 1: 2298835, 12: 2299097, 22: 2299125, 59984: 2352020, 59988: 2352019, 60020: 2361197, 60024: 2361253, 60091: 2361499}
[2025-11-21 16:47:09] 2025-11-21 21:46:24,364 | INFO     | --------------------------------------------------
[2025-11-21 16:47:09] 2025-11-21 21:46:24,364 | INFO     | 
[2025-11-21 16:47:09] 2025-11-21 21:46:24,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-21 16:47:09] 2025-11-21 21:46:24,445 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,445 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,445 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,445 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 16:47:09] 2025-11-21 21:46:24,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 16:47:09] 2025-11-21 21:46:24,447 | INFO     | job 6893867587 has completed (purged errors)
[2025-11-21 16:47:09] 2025-11-21 21:46:24,447 | INFO     | overall cleanup function is called
[2025-11-21 16:47:09] 2025-11-21 21:46:25,500 | INFO     | --- collectZombieJob: --- 10, [1762672]
[2025-11-21 16:47:09] 2025-11-21 21:46:25,501 | INFO     | zombie collector waiting for pid 1762672
[2025-11-21 16:47:09] 2025-11-21 21:46:25,501 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 16:47:09] 2025-11-21 21:46:25,501 | INFO     | collected zombie processes
[2025-11-21 16:47:09] 2025-11-21 21:46:25,501 | INFO     | will attempt to kill all subprocesses of pid=1762672
[2025-11-21 16:47:09] 2025-11-21 21:46:28,935 | INFO     | process IDs to be killed: [1762672] (in reverse order)
[2025-11-21 16:47:09] 2025-11-21 21:46:30,174 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 16:47:09] 2025-11-21 21:46:30,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 16:47:09] 2025-11-21 21:46:30,259 | INFO     | did not find any defunct processes belonging to 1762672
[2025-11-21 16:47:09] 2025-11-21 21:46:30,379 | INFO     | did not find any defunct processes belonging to 1762672
[2025-11-21 16:47:09] 2025-11-21 21:46:30,414 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 16:47:09] 2025-11-21 21:46:30,414 | INFO     | ready for new job
[2025-11-21 16:47:09] 2025-11-21 21:46:30,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 16:47:09] 2025-11-21 21:46:30,497 | INFO     | ***************************************
[2025-11-21 16:47:09] 2025-11-21 21:46:30,497 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 16:47:09] 2025-11-21 21:46:30,497 | INFO     | ***************************************
[2025-11-21 16:47:09] 2025-11-21 21:46:30,498 | INFO     | 
[2025-11-21 16:47:09] 2025-11-21 21:46:30,538 | INFO     | architecture information:
[2025-11-21 16:47:09] 2025-11-21 21:46:30,561 | INFO     | executing command: cat /etc/os-release
[2025-11-21 16:47:09] 2025-11-21 21:46:30,694 | INFO     | cat /etc/os-release:
[2025-11-21 16:47:09] NAME="CentOS Linux"
[2025-11-21 16:47:09] VERSION="7 (Core)"
[2025-11-21 16:47:09] ID="centos"
[2025-11-21 16:47:09] ID_LIKE="rhel fedora"
[2025-11-21 16:47:09] VERSION_ID="7"
[2025-11-21 16:47:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 16:47:09] ANSI_COLOR="0;31"
[2025-11-21 16:47:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 16:47:09] HOME_URL="https://www.centos.org/"
[2025-11-21 16:47:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 16:47:09] 
[2025-11-21 16:47:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 16:47:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 16:47:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 16:47:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 16:47:09] 
[2025-11-21 16:47:09] 2025-11-21 21:46:30,706 | INFO     | ***************************************
[2025-11-21 16:47:09] 2025-11-21 21:46:31,210 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-21 16:47:09] 2025-11-21 21:46:31,487 | INFO     | sufficient remaining disk space (47697625088 B)
[2025-11-21 16:47:09] 2025-11-21 21:46:31,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 16:47:09] 2025-11-21 21:46:31,487 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 16:47:09] 2025-11-21 21:46:31,487 | INFO     | update_server=False
[2025-11-21 16:47:09] 2025-11-21 21:46:31,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 16:47:09] 2025-11-21 21:46:31,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 16:47:09] 2025-11-21 21:46:31,582 | INFO     | all data control threads have been joined
[2025-11-21 16:47:09] 2025-11-21 21:46:32,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 16:47:09] 2025-11-21 21:46:32,161 | INFO     | aborting loop
[2025-11-21 16:47:09] 2025-11-21 21:46:32,493 | INFO     | [job] retrieve thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:32,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 16:47:09] 2025-11-21 21:46:32,611 | INFO     | [data] control thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:32,630 | INFO     | [job] validate thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:32,709 | INFO     | all payload control threads have been joined
[2025-11-21 16:47:09] 2025-11-21 21:46:32,922 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:33,080 | INFO     | all job control threads have been joined
[2025-11-21 16:47:09] 2025-11-21 21:46:33,138 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:33,166 | INFO     | [job] job monitor thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:33,495 | INFO     | [data] copytool_out thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:33,533 | INFO     | [payload] failed_post thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:33,569 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:33,577 | INFO     | [data] copytool_in thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:33,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 16:47:09] 2025-11-21 21:46:33,715 | INFO     | [payload] control thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:33,879 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:33,996 | INFO     | [payload] validate_post thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:34,086 | INFO     | [job] control thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:34,634 | INFO     | [job] queue monitor thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:36,615 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 16:47:09] 2025-11-21 21:46:53,608 | INFO     | [monitor] cgroup control has ended
[2025-11-21 16:47:09] 2025-11-21 21:46:55,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113242593088)>', '<ExcThread(monitor, started 140112755152640)>']
[2025-11-21 16:47:09] 2025-11-21 21:47:00,487 | INFO     | PID=1755054 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 16:47:09] 2025-11-21 21:47:00,487 | INFO     | .. there are 10 such processes running
[2025-11-21 16:47:09] 2025-11-21 21:47:00,528 | INFO     | all workflow threads have been joined
[2025-11-21 16:47:09] 2025-11-21 21:47:00,529 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 16:47:09] 2025-11-21 21:47:00,529 | INFO     | traces error code: 0
[2025-11-21 16:47:09] 2025-11-21 21:47:00,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 16:47:09] 2025-11-21 21:47:00,555 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 16:47:09] 2025-11-21 21:47:00,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 16:47:09] 2025-11-21 21:47:00,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 16:47:09] 2025-11-21 21:47:00,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 16:47:09] 2025-11-21 21:47:00,556 | INFO     | [monitor] control thread has ended
[2025-11-21 16:47:09] 2025-11-21 21:47:02,411 [wrapper] ==== pilot stdout END ====
[2025-11-21 16:47:09] 2025-11-21 21:47:02,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 16:47:09] 2025-11-21 21:47:02,912 [wrapper] pilotpid: 1755054
[2025-11-21 16:47:09] 2025-11-21 21:47:02,976 [wrapper] Pilot exit status: 0
[2025-11-21 16:47:09] 2025-11-21 21:47:03,248 [wrapper] pandaids: 6893867587
[2025-11-21 16:47:09] 2025-11-21 21:47:06,578 [wrapper] cleanup supervisor_pilot 3292439 1755055
[2025-11-21 16:47:09] 2025-11-21 21:47:06,625 [wrapper] Test setup, not cleaning
[2025-11-21 16:47:09] 2025-11-21 21:47:06,685 [wrapper] apfmon messages muted
[2025-11-21 16:47:09] 2025-11-21 21:47:06,727 [wrapper] ==== wrapper stdout END ====
[2025-11-21 16:47:09] 2025-11-21 21:47:06,775 [wrapper] ==== wrapper stderr END ====
[2025-11-21 16:47:09]  *** Error codes and diagnostics ***
[2025-11-21 16:47:09]     "exeErrorCode": 0,
[2025-11-21 16:47:09]     "exeErrorDiag": "",
[2025-11-21 16:47:09]     "pilotErrorCode": 0,
[2025-11-21 16:47:09]     "pilotErrorDiag": "",
[2025-11-21 16:47:09]  *** Listing of results directory ***
[2025-11-21 16:47:09] total 1331064
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 09:06 pilot3.tar.gz
[2025-11-21 16:47:09] -rwx------. 1 boincer umatlas     36292 Nov 20 09:36 runpilot2-wrapper.sh
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 09:36 queuedata.json
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 16:47:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:03 run_atlas
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:03 job.xml
[2025-11-21 16:47:09] -rw-r--r--. 2 boincer umatlas 410900020 Nov 21 00:03 EVNT.47493127._000624.pool.root.1
[2025-11-21 16:47:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:03 start_atlas.sh
[2025-11-21 16:47:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:03 shared
[2025-11-21 16:47:09] -rw-r--r--. 2 boincer umatlas    590095 Nov 21 00:03 input.tar.gz
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:03 boinc_lockfile
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 00:03 pandaJob.out
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas        57 Nov 21 00:03 setup.sh.local
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas    989817 Nov 21 00:04 agis_schedconf.cvmfs.json
[2025-11-21 16:47:09] drwx------. 5 boincer umatlas      4096 Nov 21 00:04 pilot3
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas       533 Nov 21 16:05 boinc_task_state.xml
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas      6660 Nov 21 16:36 init_data.xml
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas 927673428 Nov 21 16:38 HITS.47523449._006234.pool.root.1
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas      1056 Nov 21 16:44 memory_monitor_summary.json
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas   1526164 Nov 21 16:44 agis_ddmendpoints.agis.ALL.json
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas   2258991 Nov 21 16:45 log.47523449._006234.job.log.tgz.1
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas      8626 Nov 21 16:46 heartbeat.json
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas        95 Nov 21 16:47 pilot_heartbeat.json
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas       428 Nov 21 16:47 pilotlog.txt
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas   7997809 Nov 21 16:47 log.47523449._006234.job.log.1
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 16:47 boinc_mmap_file
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas       353 Nov 21 16:47 output.list
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas        29 Nov 21 16:47 wrapper_checkpoint.txt
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas       620 Nov 21 16:47 runtime_log
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas  10280960 Nov 21 16:47 result.tar.gz
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 16:47 runtime_log.err
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas       660 Nov 21 16:47 B6xLDmWxKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZoGKDmIclEUn.diag
[2025-11-21 16:47:09] -rw-r--r--. 1 boincer umatlas     21700 Nov 21 16:47 stderr.txt
[2025-11-21 16:47:09] HITS file was successfully produced:
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas 927673428 Nov 21 16:38 shared/HITS.pool.root.1
[2025-11-21 16:47:09]  *** Contents of shared directory: ***
[2025-11-21 16:47:09] total 1317844
[2025-11-21 16:47:09] -rw-r--r--. 2 boincer umatlas 410900020 Nov 21 00:03 ATLAS.root_0
[2025-11-21 16:47:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:03 start_atlas.sh
[2025-11-21 16:47:09] -rw-r--r--. 2 boincer umatlas    590095 Nov 21 00:03 input.tar.gz
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas 927673428 Nov 21 16:38 HITS.pool.root.1
[2025-11-21 16:47:09] -rw-------. 1 boincer umatlas  10280960 Nov 21 16:47 result.tar.gz
16:47:10 (1751361): run_atlas exited; CPU time 296213.203117
16:47:10 (1751361): called boinc_finish(0)

</stderr_txt>
]]>

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