Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:28:07 (1546057): wrapper (7.7.26015): starting
03:28:07 (1546057): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 03:28:07] Arguments: --nthreads 4
[2025-11-23 03:28:07] Threads: 4
[2025-11-23 03:28:07] Checking for CVMFS
[2025-11-23 03:28:07] No cvmfs_config command found, will try listing directly
[2025-11-23 03:28:07] CVMFS is ok
[2025-11-23 03:28:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 03:28:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 03:28:07] Further information can be found at the LHC@home message board.
[2025-11-23 03:28:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 03:28:07] Checking for apptainer binary...
[2025-11-23 03:28:07] which: no apptainer in ((null))
[2025-11-23 03:28:07] apptainer is not installed, using version from CVMFS
[2025-11-23 03:28:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 03:28:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-11-23 03:28:07] apptainer works
[2025-11-23 03:28:07] Set ATHENA_PROC_NUMBER=4
[2025-11-23 03:28:07] Set ATHENA_CORE_NUMBER=4
[2025-11-23 03:28:07] Starting ATLAS job with PandaID=6893869787
[2025-11-23 03:28:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 19:50:43]  *** The last 200 lines of the pilot log: ***
[2025-11-23 19:50:43] 2025-11-23 18:47:00,434 | INFO     | monitor loop #3922: job 0:6893869787 is in state 'finished'
[2025-11-23 19:50:43] 2025-11-23 18:47:00,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,487 | INFO     | time since job start (58718s) is within the limit (172800.0s)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,632 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 19:50:43] 2025-11-23 18:47:00,653 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2722.7747421874997
[2025-11-23 19:50:43] 2025-11-23 18:47:00,676 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6893869787/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,677 | INFO     | extracted standard info from prmon json
[2025-11-23 19:50:43] 2025-11-23 18:47:00,677 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 19:50:43] 2025-11-23 18:47:00,677 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 19:50:43] 2025-11-23 18:47:00,692 | INFO     | fitting pss+swap vs Time
[2025-11-23 19:50:43] 2025-11-23 18:47:00,694 | INFO     | sum of square deviations: 276059768764.26697
[2025-11-23 19:50:43] 2025-11-23 18:47:00,715 | INFO     | sum of deviations: 725991148836.1481
[2025-11-23 19:50:43] 2025-11-23 18:47:00,715 | INFO     | mean x: 1763894250.5155926
[2025-11-23 19:50:43] 2025-11-23 18:47:00,715 | INFO     | mean y: 2265549.7234927234
[2025-11-23 19:50:43] 2025-11-23 18:47:00,715 | INFO     | intersect: -4636482135.567795
[2025-11-23 19:50:43] 2025-11-23 18:47:00,716 | INFO     | chi2: 4.0531989393244325
[2025-11-23 19:50:43] 2025-11-23 18:47:00,717 | INFO     | sum of square deviations: 271777637236.765
[2025-11-23 19:50:43] 2025-11-23 18:47:00,739 | INFO     | sum of deviations: 930181049613.8346
[2025-11-23 19:50:43] 2025-11-23 18:47:00,739 | INFO     | mean x: 1763894098.0156739
[2025-11-23 19:50:43] 2025-11-23 18:47:00,739 | INFO     | mean y: 2272818.5444096136
[2025-11-23 19:50:43] 2025-11-23 18:47:00,739 | INFO     | intersect: -6034798075.815085
[2025-11-23 19:50:43] 2025-11-23 18:47:00,740 | INFO     | chi2: 1.7345368027733095
[2025-11-23 19:50:43] 2025-11-23 18:47:00,740 | INFO     | current chi2=1.7345368027733095 (change=57.2057323427995 %)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,742 | INFO     | sum of square deviations: 267540018171.7638
[2025-11-23 19:50:43] 2025-11-23 18:47:00,764 | INFO     | sum of deviations: 932024460646.7046
[2025-11-23 19:50:43] 2025-11-23 18:47:00,764 | INFO     | mean x: 1763893945.5157564
[2025-11-23 19:50:43] 2025-11-23 18:47:00,765 | INFO     | mean y: 2272883.619747899
[2025-11-23 19:50:43] 2025-11-23 18:47:00,765 | INFO     | intersect: -6142573462.887743
[2025-11-23 19:50:43] 2025-11-23 18:47:00,766 | INFO     | chi2: 1.716564697808798
[2025-11-23 19:50:43] 2025-11-23 18:47:00,766 | INFO     | current chi2=1.716564697808798 (change=1.0361328128510294 %)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,766 | INFO     | right removable region: 951
[2025-11-23 19:50:43] 2025-11-23 18:47:00,767 | INFO     | sum of square deviations: 271777628086.765
[2025-11-23 19:50:43] 2025-11-23 18:47:00,788 | INFO     | sum of deviations: 568454828112.4956
[2025-11-23 19:50:43] 2025-11-23 18:47:00,789 | INFO     | mean x: 1763894403.0156739
[2025-11-23 19:50:43] 2025-11-23 18:47:00,789 | INFO     | mean y: 2271148.766980146
[2025-11-23 19:50:43] 2025-11-23 18:47:00,789 | INFO     | intersect: -3687121156.0137424
[2025-11-23 19:50:43] 2025-11-23 18:47:00,790 | INFO     | chi2: 2.4239686633799855
[2025-11-23 19:50:43] 2025-11-23 18:47:00,790 | INFO     | current chi2=2.4239686633799855 (change=40.19615864737197 %)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,791 | INFO     | sum of square deviations: 267539999871.76376
[2025-11-23 19:50:43] 2025-11-23 18:47:00,813 | INFO     | sum of deviations: 539494584917.0261
[2025-11-23 19:50:43] 2025-11-23 18:47:00,813 | INFO     | mean x: 1763894555.5157564
[2025-11-23 19:50:43] 2025-11-23 18:47:00,813 | INFO     | mean y: 2272190.531512605
[2025-11-23 19:50:43] 2025-11-23 18:47:00,813 | INFO     | intersect: -3554622335.6010203
[2025-11-23 19:50:43] 2025-11-23 18:47:00,814 | INFO     | chi2: 2.4064704128513195
[2025-11-23 19:50:43] 2025-11-23 18:47:00,815 | INFO     | current chi2=2.4064704128513195 (change=0.7218843540768577 %)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,815 | INFO     | left removable region: 20
[2025-11-23 19:50:43] 2025-11-23 18:47:00,816 | INFO     | sum of square deviations: 250222809118.75842
[2025-11-23 19:50:43] 2025-11-23 18:47:00,837 | INFO     | sum of deviations: 710757467720.656
[2025-11-23 19:50:43] 2025-11-23 18:47:00,837 | INFO     | mean x: 1763894525.0161116
[2025-11-23 19:50:43] 2025-11-23 18:47:00,837 | INFO     | mean y: 2280845.6895810957
[2025-11-23 19:50:43] 2025-11-23 18:47:00,838 | INFO     | intersect: -5008058580.768383
[2025-11-23 19:50:43] 2025-11-23 18:47:00,839 | INFO     | chi2: 0.05636536945648935
[2025-11-23 19:50:43] 2025-11-23 18:47:00,839 | INFO     | current memory leak: 2.84 B/s (using 931 data points, chi2=0.06)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,840 | INFO     | could have reported an average CPU frequency of 2702 MHz (36 samples)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,840 | INFO     | ..............................
[2025-11-23 19:50:43] 2025-11-23 18:47:00,840 | INFO     | . Timing measurements:
[2025-11-23 19:50:43] 2025-11-23 18:47:00,840 | INFO     | . get job = 0 s
[2025-11-23 19:50:43] 2025-11-23 18:47:00,841 | INFO     | . initial setup = 1 s
[2025-11-23 19:50:43] 2025-11-23 18:47:00,841 | INFO     | . payload setup = 10 s
[2025-11-23 19:50:43] 2025-11-23 18:47:00,841 | INFO     | . stage-in = 0 s
[2025-11-23 19:50:43] 2025-11-23 18:47:00,841 | INFO     | . payload execution = 58672 s
[2025-11-23 19:50:43] 2025-11-23 18:47:00,841 | INFO     | . stage-out = 2 s
[2025-11-23 19:50:43] 2025-11-23 18:47:00,841 | INFO     | . log creation = 0 s
[2025-11-23 19:50:43] 2025-11-23 18:47:00,841 | INFO     | ..............................
[2025-11-23 19:50:43] 2025-11-23 18:47:00,938 | INFO     | 
[2025-11-23 19:50:43] 2025-11-23 18:47:00,938 | INFO     | job summary report
[2025-11-23 19:50:43] 2025-11-23 18:47:00,938 | INFO     | --------------------------------------------------
[2025-11-23 19:50:43] 2025-11-23 18:47:00,938 | INFO     | PanDA job id: 6893869787
[2025-11-23 19:50:43] 2025-11-23 18:47:00,938 | INFO     | task id: 47523449
[2025-11-23 19:50:43] 2025-11-23 18:47:00,938 | INFO     | errors: (none)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | pilot state: finished 
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | transexitcode: 0
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | exeerrorcode: 0
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | exeerrordiag: 
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | exitcode: 0
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | exitmsg: OK
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | cpuconsumptiontime: 233717 s
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | nevents: 1000
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | neventsw: 0
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | pid: 1572835
[2025-11-23 19:50:43] 2025-11-23 18:47:00,939 | INFO     | pgrp: 1572835
[2025-11-23 19:50:43] 2025-11-23 18:47:00,940 | INFO     | corecount: 4
[2025-11-23 19:50:43] 2025-11-23 18:47:00,940 | INFO     | event service: False
[2025-11-23 19:50:43] 2025-11-23 18:47:00,940 | INFO     | sizes: {0: 2297978, 1: 2298846, 8: 2299108, 12: 2299136, 58687: 2353812, 58690: 2362830, 58691: 2363014, 58700: 2363260}
[2025-11-23 19:50:43] 2025-11-23 18:47:00,940 | INFO     | --------------------------------------------------
[2025-11-23 19:50:43] 2025-11-23 18:47:00,940 | INFO     | 
[2025-11-23 19:50:43] 2025-11-23 18:47:00,940 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-11-23 19:50:43] 2025-11-23 18:47:00,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,970 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 19:50:43] 2025-11-23 18:47:00,972 | INFO     | job 6893869787 has completed (purged errors)
[2025-11-23 19:50:43] 2025-11-23 18:47:00,972 | INFO     | overall cleanup function is called
[2025-11-23 19:50:43] 2025-11-23 18:47:01,989 | INFO     | --- collectZombieJob: --- 10, [1572835]
[2025-11-23 19:50:43] 2025-11-23 18:47:01,989 | INFO     | zombie collector waiting for pid 1572835
[2025-11-23 19:50:43] 2025-11-23 18:47:01,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 19:50:43] 2025-11-23 18:47:01,989 | INFO     | collected zombie processes
[2025-11-23 19:50:43] 2025-11-23 18:47:01,989 | INFO     | will attempt to kill all subprocesses of pid=1572835
[2025-11-23 19:50:43] 2025-11-23 18:47:02,756 | INFO     | process IDs to be killed: [1572835] (in reverse order)
[2025-11-23 19:50:43] 2025-11-23 18:47:03,033 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 19:50:43] 2025-11-23 18:47:03,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 19:50:43] 2025-11-23 18:47:03,064 | INFO     | did not find any defunct processes belonging to 1572835
[2025-11-23 19:50:43] 2025-11-23 18:47:03,093 | INFO     | did not find any defunct processes belonging to 1572835
[2025-11-23 19:50:43] 2025-11-23 18:47:03,095 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 19:50:43] 2025-11-23 18:47:03,098 | INFO     | ready for new job
[2025-11-23 19:50:43] 2025-11-23 18:47:03,098 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 19:50:43] 2025-11-23 18:47:03,104 | INFO     | ***************************************
[2025-11-23 19:50:43] 2025-11-23 18:47:03,104 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 19:50:43] 2025-11-23 18:47:03,104 | INFO     | ***************************************
[2025-11-23 19:50:43] 2025-11-23 18:47:03,104 | INFO     | 
[2025-11-23 19:50:43] 2025-11-23 18:47:03,112 | INFO     | architecture information:
[2025-11-23 19:50:43] 2025-11-23 18:47:03,113 | INFO     | executing command: cat /etc/os-release
[2025-11-23 19:50:43] 2025-11-23 18:47:03,135 | INFO     | cat /etc/os-release:
[2025-11-23 19:50:43] NAME="CentOS Linux"
[2025-11-23 19:50:43] VERSION="7 (Core)"
[2025-11-23 19:50:43] ID="centos"
[2025-11-23 19:50:43] ID_LIKE="rhel fedora"
[2025-11-23 19:50:43] VERSION_ID="7"
[2025-11-23 19:50:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 19:50:43] ANSI_COLOR="0;31"
[2025-11-23 19:50:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 19:50:43] HOME_URL="https://www.centos.org/"
[2025-11-23 19:50:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 19:50:43] 
[2025-11-23 19:50:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 19:50:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 19:50:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 19:50:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 19:50:43] 
[2025-11-23 19:50:43] 2025-11-23 18:47:03,136 | INFO     | ***************************************
[2025-11-23 19:50:43] 2025-11-23 18:47:03,638 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-11-23 19:50:43] 2025-11-23 18:47:03,665 | INFO     | sufficient remaining disk space (3293842505728 B)
[2025-11-23 19:50:43] 2025-11-23 18:47:03,666 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 19:50:43] 2025-11-23 18:47:03,666 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 19:50:43] 2025-11-23 18:47:03,666 | INFO     | update_server=False
[2025-11-23 19:50:43] 2025-11-23 18:47:03,666 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 19:50:43] 2025-11-23 18:47:03,667 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 19:50:43] 2025-11-23 18:47:03,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 19:50:43] 2025-11-23 18:47:03,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:50:43] 2025-11-23 18:47:03,942 | INFO     | aborting loop
[2025-11-23 19:50:43] 2025-11-23 18:47:04,369 | INFO     | all job control threads have been joined
[2025-11-23 19:50:43] 2025-11-23 18:47:04,529 | INFO     | all payload control threads have been joined
[2025-11-23 19:50:43] 2025-11-23 18:47:04,672 | INFO     | [job] retrieve thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:04,680 | INFO     | all data control threads have been joined
[2025-11-23 19:50:43] 2025-11-23 18:47:04,809 | INFO     | [data] copytool_in thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:04,845 | INFO     | [payload] validate_post thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:04,947 | INFO     | [job] job monitor thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,052 | INFO     | [payload] failed_post thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,237 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,345 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,374 | INFO     | [job] control thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,382 | INFO     | [job] validate thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,535 | INFO     | [payload] control thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,685 | INFO     | [data] control thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,848 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,859 | INFO     | [data] copytool_out thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,914 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:05,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:50:43] 2025-11-23 18:47:06,953 | INFO     | [job] queue monitor thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:07,673 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 19:50:43] 2025-11-23 18:47:34,530 | INFO     | PID=1552902 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-23 19:50:43] 2025-11-23 18:47:34,530 | INFO     | .. there are 9 such processes running
[2025-11-23 19:50:43] 2025-11-23 18:47:34,530 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 19:50:43] 2025-11-23 18:47:34,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 19:50:43] 2025-11-23 18:47:34,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 19:50:43] 2025-11-23 18:48:00,316 | INFO     | [monitor] cgroup control has ended
[2025-11-23 19:50:43] 2025-11-23 18:48:00,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22635552872256)>', '<ExcThread(monitor, started 22635316479744)>']
[2025-11-23 19:50:43] 2025-11-23 18:48:00,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 19:50:43] 2025-11-23 18:48:00,664 | INFO     | [monitor] control thread has ended
[2025-11-23 19:50:43] 2025-11-23 18:48:05,398 | INFO     | all workflow threads have been joined
[2025-11-23 19:50:43] 2025-11-23 18:48:05,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 19:50:43] 2025-11-23 18:48:05,398 | INFO     | traces error code: 0
[2025-11-23 19:50:43] 2025-11-23 18:48:05,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 19:50:43] 2025-11-23 18:48:05,569 [wrapper] ==== pilot stdout END ====
[2025-11-23 19:50:43] 2025-11-23 18:48:05,573 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 19:50:43] 2025-11-23 18:48:05,576 [wrapper] pilotpid: 1552902
[2025-11-23 19:50:43] 2025-11-23 18:48:05,580 [wrapper] Pilot exit status: 0
[2025-11-23 19:50:43] 2025-11-23 18:48:05,595 [wrapper] pandaids: 6893869787
[2025-11-23 19:50:43] 2025-11-23 18:48:05,784 [wrapper] cleanup supervisor_pilot 3272397 1552903
[2025-11-23 19:50:43] 2025-11-23 18:48:05,789 [wrapper] Test setup, not cleaning
[2025-11-23 19:50:43] 2025-11-23 18:48:05,793 [wrapper] apfmon messages muted
[2025-11-23 19:50:43] 2025-11-23 18:48:05,797 [wrapper] ==== wrapper stdout END ====
[2025-11-23 19:50:43] 2025-11-23 18:48:05,801 [wrapper] ==== wrapper stderr END ====
[2025-11-23 19:50:43]  *** Error codes and diagnostics ***
[2025-11-23 19:50:43]     "exeErrorCode": 0,
[2025-11-23 19:50:43]     "exeErrorDiag": "",
[2025-11-23 19:50:43]     "pilotErrorCode": 0,
[2025-11-23 19:50:43]     "pilotErrorDiag": "",
[2025-11-23 19:50:43]  *** Listing of results directory ***
[2025-11-23 19:50:43] total 1304840
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:06 pilot3.tar.gz
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:45 queuedata.json
[2025-11-23 19:50:43] -rwx------ 1 boinc boinc     36292 Nov 20 15:46 runpilot2-wrapper.sh
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc       100 Nov 23 03:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 19:50:43] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 03:28 run_atlas
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc       105 Nov 23 03:28 job.xml
[2025-11-23 19:50:43] -rw-r--r-- 2 boinc boinc 408679721 Nov 23 03:28 EVNT.47493127._000642.pool.root.1
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc      6688 Nov 23 03:28 init_data.xml
[2025-11-23 19:50:43] -rw-r--r-- 2 boinc boinc     15847 Nov 23 03:28 start_atlas.sh
[2025-11-23 19:50:43] drwxrwx--x 2 boinc boinc      4096 Nov 23 03:28 shared
[2025-11-23 19:50:43] -rw-r--r-- 2 boinc boinc    590097 Nov 23 03:28 input.tar.gz
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc         0 Nov 23 03:28 boinc_lockfile
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc      2785 Nov 23 03:28 pandaJob.out
[2025-11-23 19:50:43] -rw------- 1 boinc boinc    989784 Nov 23 03:28 agis_schedconf.cvmfs.json
[2025-11-23 19:50:43] drwx------ 5 boinc boinc      4096 Nov 23 03:28 pilot3
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc       532 Nov 23 19:40 boinc_task_state.xml
[2025-11-23 19:50:43] -rw------- 1 boinc boinc 904031111 Nov 23 19:46 HITS.47523449._006416.pool.root.1
[2025-11-23 19:50:43] -rw------- 1 boinc boinc      1038 Nov 23 19:46 memory_monitor_summary.json
[2025-11-23 19:50:43] -rw------- 1 boinc boinc        95 Nov 23 19:46 pilot_heartbeat.json
[2025-11-23 19:50:43] -rw------- 1 boinc boinc   1526164 Nov 23 19:46 agis_ddmendpoints.agis.ALL.json
[2025-11-23 19:50:43] -rw------- 1 boinc boinc   1698131 Nov 23 19:46 log.47523449._006416.job.log.tgz.1
[2025-11-23 19:50:43] -rw------- 1 boinc boinc      8592 Nov 23 19:47 heartbeat.json
[2025-11-23 19:50:43] -rw------- 1 boinc boinc      4836 Nov 23 19:48 pilotlog.txt
[2025-11-23 19:50:43] -rw------- 1 boinc boinc   8062463 Nov 23 19:48 log.47523449._006416.job.log.1
[2025-11-23 19:50:43] -rw------- 1 boinc boinc       353 Nov 23 19:48 output.list
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc       620 Nov 23 19:48 runtime_log
[2025-11-23 19:50:43] -rw------- 1 boinc boinc   9779200 Nov 23 19:48 result.tar.gz
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc      9223 Nov 23 19:48 runtime_log.err
[2025-11-23 19:50:43] -rw------- 1 boinc boinc       671 Nov 23 19:48 FbZMDmQ6Kg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmc8HKDmhkrOOm.diag
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc        28 Nov 23 19:50 wrapper_checkpoint.txt
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc      8192 Nov 23 19:50 boinc_mmap_file
[2025-11-23 19:50:43] -rw-r--r-- 1 boinc boinc     21129 Nov 23 19:50 stderr.txt
[2025-11-23 19:50:43] HITS file was successfully produced:
[2025-11-23 19:50:43] -rw------- 1 boinc boinc 904031111 Nov 23 19:46 shared/HITS.pool.root.1
[2025-11-23 19:50:43]  *** Contents of shared directory: ***
[2025-11-23 19:50:43] total 1292104
[2025-11-23 19:50:43] -rw-r--r-- 2 boinc boinc 408679721 Nov 23 03:28 ATLAS.root_0
[2025-11-23 19:50:43] -rw-r--r-- 2 boinc boinc     15847 Nov 23 03:28 start_atlas.sh
[2025-11-23 19:50:43] -rw-r--r-- 2 boinc boinc    590097 Nov 23 03:28 input.tar.gz
[2025-11-23 19:50:43] -rw------- 1 boinc boinc 904031111 Nov 23 19:46 HITS.pool.root.1
[2025-11-23 19:50:43] -rw------- 1 boinc boinc   9779200 Nov 23 19:48 result.tar.gz
19:50:45 (1546057): run_atlas exited; CPU time 236582.075057
19:50:45 (1546057): called boinc_finish(0)

</stderr_txt>
]]>

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