Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:27 (979611): wrapper (7.7.26015): starting
00:01:27 (979611): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:01:27] Arguments: --nthreads 9
[2025-11-21 00:01:27] Threads: 9
[2025-11-21 00:01:27] Checking for CVMFS
[2025-11-21 00:01:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:01:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:01:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:01:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:01:29] 2.13.2.0 3108276 22521 193268 153108 3 66 23468092 39288833 8052 16776704 0 11336300 99.478 15317187 37866 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:01:29] CVMFS is ok
[2025-11-21 00:01:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:01:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:01:29] Further information can be found at the LHC@home message board.
[2025-11-21 00:01:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:01:29] Checking for apptainer binary...
[2025-11-21 00:01:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:01:29] Running /usr/bin/apptainer --version
[2025-11-21 00:01:29] apptainer version 1.4.4-1.el9
[2025-11-21 00:01:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:01:29] c-211-32.aglt2.org
[2025-11-21 00:01:29] apptainer works
[2025-11-21 00:01:29] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:01:29] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:01:29] Starting ATLAS job with PandaID=6893868235
[2025-11-21 00:01:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 20:19:08]  *** The last 200 lines of the pilot log: ***
[2025-11-22 20:19:08] 2025-11-23 01:17:58,916 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.993475
[2025-11-22 20:19:08] 2025-11-23 01:17:58,924 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893868235/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 20:19:08] 2025-11-23 01:17:58,925 | INFO     | extracted standard info from prmon json
[2025-11-22 20:19:08] 2025-11-23 01:17:58,926 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 20:19:08] 2025-11-23 01:17:58,926 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 20:19:08] 2025-11-23 01:17:58,993 | INFO     | fitting pss+swap vs Time
[2025-11-22 20:19:08] 2025-11-23 01:17:58,997 | INFO     | sum of square deviations: 5507041801508.118
[2025-11-22 20:19:08] 2025-11-23 01:17:59,016 | INFO     | time since job start (159297s) is within the limit (172800.0s)
[2025-11-22 20:19:08] 2025-11-23 01:17:59,191 | INFO     | sum of deviations: 16038551841043.947
[2025-11-22 20:19:08] 2025-11-23 01:17:59,191 | INFO     | mean x: 1763781112.6730547
[2025-11-22 20:19:08] 2025-11-23 01:17:59,192 | INFO     | mean y: 3158170.4630126487
[2025-11-22 20:19:08] 2025-11-23 01:17:59,192 | INFO     | intersect: -5133627754.080739
[2025-11-22 20:19:08] 2025-11-23 01:17:59,195 | INFO     | chi2: 11.405984078714013
[2025-11-22 20:19:08] 2025-11-23 01:17:59,199 | INFO     | sum of square deviations: 5475446448746.887
[2025-11-22 20:19:08] 2025-11-23 01:17:59,396 | INFO     | sum of deviations: 17079491471004.637
[2025-11-22 20:19:08] 2025-11-23 01:17:59,397 | INFO     | mean x: 1763780960.1839478
[2025-11-22 20:19:08] 2025-11-23 01:17:59,397 | INFO     | mean y: 3163194.4412442395
[2025-11-22 20:19:08] 2025-11-23 01:17:59,397 | INFO     | intersect: -5498576645.070182
[2025-11-22 20:19:08] 2025-11-23 01:17:59,401 | INFO     | chi2: 7.779472957786724
[2025-11-22 20:19:08] 2025-11-23 01:17:59,401 | INFO     | current chi2=7.779472957786724 (change=31.794811354288395 %)
[2025-11-22 20:19:08] 2025-11-23 01:17:59,404 | INFO     | sum of square deviations: 5443972214535.052
[2025-11-22 20:19:08] 2025-11-23 01:17:59,588 | INFO     | sum of deviations: 17664638172381.695
[2025-11-22 20:19:08] 2025-11-23 01:17:59,589 | INFO     | mean x: 1763780807.6948826
[2025-11-22 20:19:08] 2025-11-23 01:17:59,589 | INFO     | mean y: 3166028.212774144
[2025-11-22 20:19:08] 2025-11-23 01:17:59,589 | INFO     | intersect: -5719961966.477441
[2025-11-22 20:19:08] 2025-11-23 01:17:59,594 | INFO     | chi2: 6.2547635897273794
[2025-11-22 20:19:08] 2025-11-23 01:17:59,595 | INFO     | current chi2=6.2547635897273794 (change=19.599134495778586 %)
[2025-11-22 20:19:08] 2025-11-23 01:17:59,595 | INFO     | right removable region: 2598
[2025-11-22 20:19:08] 2025-11-23 01:17:59,603 | INFO     | sum of square deviations: 5475437420136.892
[2025-11-22 20:19:08] 2025-11-23 01:17:59,919 | INFO     | sum of deviations: 15055458880186.6
[2025-11-22 20:19:08] 2025-11-23 01:17:59,919 | INFO     | mean x: 1763781265.1839478
[2025-11-22 20:19:08] 2025-11-23 01:17:59,920 | INFO     | mean y: 3162913.339093702
[2025-11-22 20:19:08] 2025-11-23 01:17:59,920 | INFO     | intersect: -4846593238.37244
[2025-11-22 20:19:08] 2025-11-23 01:17:59,923 | INFO     | chi2: 8.287713794539972
[2025-11-22 20:19:08] 2025-11-23 01:17:59,924 | INFO     | current chi2=8.287713794539972 (change=27.338897395038416 %)
[2025-11-22 20:19:08] 2025-11-23 01:17:59,927 | INFO     | sum of square deviations: 5443955586868.515
[2025-11-22 20:19:08] 2025-11-23 01:18:00,249 | INFO     | sum of deviations: 14774665636326.094
[2025-11-22 20:19:08] 2025-11-23 01:18:00,249 | INFO     | mean x: 1763781417.6914198
[2025-11-22 20:19:08] 2025-11-23 01:18:00,250 | INFO     | mean y: 3164273.6921893037
[2025-11-22 20:19:08] 2025-11-23 01:18:00,250 | INFO     | intersect: -4783664032.6985
[2025-11-22 20:19:08] 2025-11-23 01:18:00,254 | INFO     | chi2: 8.1529405169586
[2025-11-22 20:19:08] 2025-11-23 01:18:00,255 | INFO     | current chi2=8.1529405169586 (change=1.626181609579256 %)
[2025-11-22 20:19:08] 2025-11-23 01:18:00,255 | INFO     | left removable region: 20
[2025-11-22 20:19:08] 2025-11-23 01:18:00,259 | INFO     | sum of square deviations: 5313066901390.425
[2025-11-22 20:19:08] 2025-11-23 01:18:00,447 | INFO     | sum of deviations: 15881254184872.756
[2025-11-22 20:19:08] 2025-11-23 01:18:00,447 | INFO     | mean x: 1763781387.2284718
[2025-11-22 20:19:08] 2025-11-23 01:18:00,448 | INFO     | mean y: 3175222.905352987
[2025-11-22 20:19:08] 2025-11-23 01:18:00,448 | INFO     | intersect: -5268932404.761141
[2025-11-22 20:19:08] 2025-11-23 01:18:00,452 | INFO     | chi2: 2.6511774061262
[2025-11-22 20:19:08] 2025-11-23 01:18:00,452 | INFO     | current memory leak: 2.99 B/s (using 2578 data points, chi2=2.65)
[2025-11-22 20:19:08] 2025-11-23 01:18:00,454 | INFO     | could have reported an average CPU frequency of 2900 MHz (90 samples)
[2025-11-22 20:19:08] 2025-11-23 01:18:00,455 | INFO     | ..............................
[2025-11-22 20:19:08] 2025-11-23 01:18:00,455 | INFO     | . Timing measurements:
[2025-11-22 20:19:08] 2025-11-23 01:18:00,455 | INFO     | . get job = 0 s
[2025-11-22 20:19:08] 2025-11-23 01:18:00,455 | INFO     | . initial setup = 9 s
[2025-11-22 20:19:08] 2025-11-23 01:18:00,455 | INFO     | . payload setup = 58 s
[2025-11-22 20:19:08] 2025-11-23 01:18:00,455 | INFO     | . stage-in = 0 s
[2025-11-22 20:19:08] 2025-11-23 01:18:00,456 | INFO     | . payload execution = 159132 s
[2025-11-22 20:19:08] 2025-11-23 01:18:00,456 | INFO     | . stage-out = 5 s
[2025-11-22 20:19:08] 2025-11-23 01:18:00,456 | INFO     | . log creation = 2 s
[2025-11-22 20:19:08] 2025-11-23 01:18:00,456 | INFO     | ..............................
[2025-11-22 20:19:08] 2025-11-23 01:18:00,603 | INFO     | 
[2025-11-22 20:19:08] 2025-11-23 01:18:00,604 | INFO     | job summary report
[2025-11-22 20:19:08] 2025-11-23 01:18:00,604 | INFO     | --------------------------------------------------
[2025-11-22 20:19:08] 2025-11-23 01:18:00,604 | INFO     | PanDA job id: 6893868235
[2025-11-22 20:19:08] 2025-11-23 01:18:00,604 | INFO     | task id: 47523449
[2025-11-22 20:19:08] 2025-11-23 01:18:00,604 | INFO     | errors: (none)
[2025-11-22 20:19:08] 2025-11-23 01:18:00,604 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 20:19:08] 2025-11-23 01:18:00,605 | INFO     | pilot state: finished 
[2025-11-22 20:19:08] 2025-11-23 01:18:00,605 | INFO     | transexitcode: 0
[2025-11-22 20:19:08] 2025-11-23 01:18:00,605 | INFO     | exeerrorcode: 0
[2025-11-22 20:19:08] 2025-11-23 01:18:00,605 | INFO     | exeerrordiag: 
[2025-11-22 20:19:08] 2025-11-23 01:18:00,605 | INFO     | exitcode: 0
[2025-11-22 20:19:08] 2025-11-23 01:18:00,605 | INFO     | exitmsg: OK
[2025-11-22 20:19:08] 2025-11-23 01:18:00,605 | INFO     | cpuconsumptiontime: 484605 s
[2025-11-22 20:19:08] 2025-11-23 01:18:00,606 | INFO     | nevents: 1000
[2025-11-22 20:19:08] 2025-11-23 01:18:00,606 | INFO     | neventsw: 0
[2025-11-22 20:19:08] 2025-11-23 01:18:00,606 | INFO     | pid: 991426
[2025-11-22 20:19:08] 2025-11-23 01:18:00,606 | INFO     | pgrp: 991426
[2025-11-22 20:19:08] 2025-11-23 01:18:00,606 | INFO     | corecount: 9
[2025-11-22 20:19:08] 2025-11-23 01:18:00,606 | INFO     | event service: False
[2025-11-22 20:19:08] 2025-11-23 01:18:00,607 | INFO     | sizes: {0: 2297978, 1: 2298663, 2: 2298663, 3: 2298890, 4: 2298890, 16: 2298918, 27: 2299074, 39: 2299102, 44: 2299392, 50: 2299420, 159195: 2397225, 159201: 24062
[2025-11-22 20:19:08] 2025-11-23 01:18:00,607 | INFO     | --------------------------------------------------
[2025-11-22 20:19:08] 2025-11-23 01:18:00,607 | INFO     | 
[2025-11-22 20:19:08] 2025-11-23 01:18:00,607 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 20:19:08] 2025-11-23 01:18:00,657 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,657 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,657 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,658 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,660 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 20:19:08] 2025-11-23 01:18:00,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,660 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 20:19:08] 2025-11-23 01:18:00,682 | INFO     | job 6893868235 has completed (purged errors)
[2025-11-22 20:19:08] 2025-11-23 01:18:00,682 | INFO     | overall cleanup function is called
[2025-11-22 20:19:08] 2025-11-23 01:18:01,721 | INFO     | --- collectZombieJob: --- 10, [991426]
[2025-11-22 20:19:08] 2025-11-23 01:18:01,722 | INFO     | zombie collector waiting for pid 991426
[2025-11-22 20:19:08] 2025-11-23 01:18:01,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 20:19:08] 2025-11-23 01:18:01,724 | INFO     | collected zombie processes
[2025-11-22 20:19:08] 2025-11-23 01:18:01,724 | INFO     | will attempt to kill all subprocesses of pid=991426
[2025-11-22 20:19:08] 2025-11-23 01:18:02,087 | INFO     | process IDs to be killed: [991426] (in reverse order)
[2025-11-22 20:19:08] 2025-11-23 01:18:02,189 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 20:19:08] 2025-11-23 01:18:02,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 20:19:08] 2025-11-23 01:18:02,215 | INFO     | did not find any defunct processes belonging to 991426
[2025-11-22 20:19:08] 2025-11-23 01:18:02,229 | INFO     | did not find any defunct processes belonging to 991426
[2025-11-22 20:19:08] 2025-11-23 01:18:02,242 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 20:19:08] 2025-11-23 01:18:02,242 | INFO     | ready for new job
[2025-11-22 20:19:08] 2025-11-23 01:18:02,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 20:19:08] 2025-11-23 01:18:02,254 | INFO     | ***************************************
[2025-11-22 20:19:08] 2025-11-23 01:18:02,254 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 20:19:08] 2025-11-23 01:18:02,255 | INFO     | ***************************************
[2025-11-22 20:19:08] 2025-11-23 01:18:02,255 | INFO     | 
[2025-11-22 20:19:08] 2025-11-23 01:18:02,257 | INFO     | architecture information:
[2025-11-22 20:19:08] 2025-11-23 01:18:02,257 | INFO     | executing command: cat /etc/os-release
[2025-11-22 20:19:08] 2025-11-23 01:18:02,287 | INFO     | cat /etc/os-release:
[2025-11-22 20:19:08] NAME="CentOS Linux"
[2025-11-22 20:19:08] VERSION="7 (Core)"
[2025-11-22 20:19:08] ID="centos"
[2025-11-22 20:19:08] ID_LIKE="rhel fedora"
[2025-11-22 20:19:08] VERSION_ID="7"
[2025-11-22 20:19:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 20:19:08] ANSI_COLOR="0;31"
[2025-11-22 20:19:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 20:19:08] HOME_URL="https://www.centos.org/"
[2025-11-22 20:19:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 20:19:08] 
[2025-11-22 20:19:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 20:19:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 20:19:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 20:19:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 20:19:08] 
[2025-11-22 20:19:08] 2025-11-23 01:18:02,288 | INFO     | ***************************************
[2025-11-22 20:19:08] 2025-11-23 01:18:02,792 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 20:19:08] 2025-11-23 01:18:02,884 | INFO     | sufficient remaining disk space (50241470464 B)
[2025-11-22 20:19:08] 2025-11-23 01:18:02,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 20:19:08] 2025-11-23 01:18:02,885 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 20:19:08] 2025-11-23 01:18:02,885 | INFO     | update_server=False
[2025-11-22 20:19:08] 2025-11-23 01:18:02,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 20:19:08] 2025-11-23 01:18:02,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 20:19:08] 2025-11-23 01:18:03,186 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 20:19:08] 2025-11-23 01:18:03,237 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 20:19:08] 2025-11-23 01:18:03,237 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 20:19:08] 2025-11-23 01:18:03,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:19:08] 2025-11-23 01:18:03,237 | INFO     | will abort loop
[2025-11-22 20:19:08] 2025-11-23 01:18:03,862 | INFO     | all data control threads have been joined
[2025-11-22 20:19:08] 2025-11-23 01:18:03,892 | INFO     | [job] retrieve thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:04,148 | INFO     | all payload control threads have been joined
[2025-11-22 20:19:08] 2025-11-23 01:18:04,243 | INFO     | [job] job monitor thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:04,254 | INFO     | all job control threads have been joined
[2025-11-22 20:19:08] 2025-11-23 01:18:04,868 | INFO     | [data] control thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:04,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:04,972 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:05,069 | INFO     | [payload] validate_post thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:05,101 | INFO     | [data] copytool_in thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:05,102 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:05,149 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:05,154 | INFO     | [payload] control thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:05,193 | INFO     | [data] copytool_out thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:05,261 | INFO     | [job] control thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:05,296 | INFO     | [job] validate thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:05,372 | INFO     | [payload] failed_post thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:05,620 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:19:08] 2025-11-23 01:18:06,628 | INFO     | [job] queue monitor thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:06,897 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 20:19:08] 2025-11-23 01:18:18,615 [wrapper] supervise_pilot (15 min periods counter: 178)
[2025-11-22 20:19:08] 2025-11-23 01:18:32,742 | INFO     | PID=984657 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 20:19:08] 2025-11-23 01:18:32,742 | INFO     | .. there are 8 such processes running
[2025-11-22 20:19:08] 2025-11-23 01:18:32,742 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 20:19:08] 2025-11-23 01:18:32,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 20:19:08] 2025-11-23 01:18:32,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 20:19:08] 2025-11-23 01:19:01,111 | INFO     | [monitor] cgroup control has ended
[2025-11-22 20:19:08] 2025-11-23 01:19:02,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139681122051904)>', '<ExcThread(monitor, started 139680112699136)>']
[2025-11-22 20:19:08] 2025-11-23 01:19:02,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 20:19:08] 2025-11-23 01:19:02,945 | INFO     | [monitor] control thread has ended
[2025-11-22 20:19:08] 2025-11-23 01:19:07,766 | INFO     | all workflow threads have been joined
[2025-11-22 20:19:08] 2025-11-23 01:19:07,766 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 20:19:08] 2025-11-23 01:19:07,766 | INFO     | traces error code: 0
[2025-11-22 20:19:08] 2025-11-23 01:19:07,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 20:19:08] 2025-11-23 01:19:08,257 [wrapper] ==== pilot stdout END ====
[2025-11-22 20:19:08] 2025-11-23 01:19:08,273 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 20:19:08] 2025-11-23 01:19:08,315 [wrapper] pilotpid: 984657
[2025-11-22 20:19:08] 2025-11-23 01:19:08,340 [wrapper] Pilot exit status: 0
[2025-11-22 20:19:08] 2025-11-23 01:19:08,444 [wrapper] pandaids: 6893868235
[2025-11-22 20:19:08] 2025-11-23 01:19:08,563 [wrapper] cleanup supervisor_pilot  262074 984658
[2025-11-22 20:19:08] 2025-11-23 01:19:08,566 [wrapper] Test setup, not cleaning
[2025-11-22 20:19:08] 2025-11-23 01:19:08,570 [wrapper] apfmon messages muted
[2025-11-22 20:19:08] 2025-11-23 01:19:08,573 [wrapper] ==== wrapper stdout END ====
[2025-11-22 20:19:08] 2025-11-23 01:19:08,577 [wrapper] ==== wrapper stderr END ====
[2025-11-22 20:19:08]  *** Error codes and diagnostics ***
[2025-11-22 20:19:08]     "exeErrorCode": 0,
[2025-11-22 20:19:08]     "exeErrorDiag": "",
[2025-11-22 20:19:08]     "pilotErrorCode": 0,
[2025-11-22 20:19:08]     "pilotErrorDiag": "",
[2025-11-22 20:19:08]  *** Listing of results directory ***
[2025-11-22 20:19:08] total 1354064
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 09:06 pilot3.tar.gz
[2025-11-22 20:19:08] -rwx------. 1 boincer umatlas     36292 Nov 20 09:41 runpilot2-wrapper.sh
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 09:41 queuedata.json
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 20:19:08] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:01 run_atlas
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:01 job.xml
[2025-11-22 20:19:08] -rw-r--r--. 2 boincer umatlas 411582060 Nov 21 00:01 EVNT.47493127._000632.pool.root.1
[2025-11-22 20:19:08] -rw-r--r--. 2 boincer umatlas    590090 Nov 21 00:01 input.tar.gz
[2025-11-22 20:19:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:01 start_atlas.sh
[2025-11-22 20:19:08] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:01 shared
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:01 boinc_lockfile
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 00:01 pandaJob.out
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas        57 Nov 21 00:01 setup.sh.local
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas    989817 Nov 21 00:02 agis_schedconf.cvmfs.json
[2025-11-22 20:19:08] drwx------. 5 boincer umatlas      4096 Nov 21 00:03 pilot3
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas       534 Nov 22 20:03 boinc_task_state.xml
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas      6526 Nov 22 20:11 init_data.xml
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas 924833483 Nov 22 20:16 HITS.47523449._006319.pool.root.1
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas      1068 Nov 22 20:17 memory_monitor_summary.json
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas   1526164 Nov 22 20:17 agis_ddmendpoints.agis.ALL.json
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas   3366521 Nov 22 20:17 log.47523449._006319.job.log.tgz.1
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas        95 Nov 22 20:18 pilot_heartbeat.json
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas      8641 Nov 22 20:18 heartbeat.json
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas        30 Nov 22 20:18 wrapper_checkpoint.txt
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas      5009 Nov 22 20:19 pilotlog.txt
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas  19742195 Nov 22 20:19 log.47523449._006319.job.log.1
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas       353 Nov 22 20:19 output.list
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 20:19 boinc_mmap_file
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas       620 Nov 22 20:19 runtime_log
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas  23132160 Nov 22 20:19 result.tar.gz
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas       665 Nov 22 20:19 WesKDmU1Kg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJ7HKDmto3lPm.diag
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas      9344 Nov 22 20:19 runtime_log.err
[2025-11-22 20:19:08] -rw-r--r--. 1 boincer umatlas     21336 Nov 22 20:19 stderr.txt
[2025-11-22 20:19:08] HITS file was successfully produced:
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas 924833483 Nov 22 20:16 shared/HITS.pool.root.1
[2025-11-22 20:19:08]  *** Contents of shared directory: ***
[2025-11-22 20:19:08] total 1328292
[2025-11-22 20:19:08] -rw-r--r--. 2 boincer umatlas 411582060 Nov 21 00:01 ATLAS.root_0
[2025-11-22 20:19:08] -rw-r--r--. 2 boincer umatlas    590090 Nov 21 00:01 input.tar.gz
[2025-11-22 20:19:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:01 start_atlas.sh
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas 924833483 Nov 22 20:16 HITS.pool.root.1
[2025-11-22 20:19:08] -rw-------. 1 boincer umatlas  23132160 Nov 22 20:19 result.tar.gz
20:19:30 (979611): run_atlas exited; CPU time 488015.503986
20:19:30 (979611): called boinc_finish(0)

</stderr_txt>
]]>

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