Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:07:32 (700276): wrapper (7.7.26015): starting
00:07:32 (700276): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 00:07:32] Arguments: --nthreads 4
[2025-11-27 00:07:32] Threads: 4
[2025-11-27 00:07:32] Checking for CVMFS
[2025-11-27 00:07:32] No cvmfs_config command found, will try listing directly
[2025-11-27 00:07:32] CVMFS is ok
[2025-11-27 00:07:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:07:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:07:32] Further information can be found at the LHC@home message board.
[2025-11-27 00:07:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:07:32] Checking for apptainer binary...
[2025-11-27 00:07:32] which: no apptainer in ((null))
[2025-11-27 00:07:32] apptainer is not installed, using version from CVMFS
[2025-11-27 00:07:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:07:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-11-27 00:07:33] apptainer works
[2025-11-27 00:07:33] Set ATHENA_PROC_NUMBER=4
[2025-11-27 00:07:33] Set ATHENA_CORE_NUMBER=4
[2025-11-27 00:07:33] Starting ATLAS job with PandaID=6893852408
[2025-11-27 00:07:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:31:15]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:31:15] 2025-11-27 16:27:00,236 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2813.5681250000007
[2025-11-27 17:31:15] 2025-11-27 16:27:00,248 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6893852408/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,249 | INFO     | extracted standard info from prmon json
[2025-11-27 17:31:15] 2025-11-27 16:27:00,250 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:31:15] 2025-11-27 16:27:00,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:31:15] 2025-11-27 16:27:00,268 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:31:15] 2025-11-27 16:27:00,269 | INFO     | sum of square deviations: 331002059195.5
[2025-11-27 17:31:15] 2025-11-27 16:27:00,290 | INFO     | sum of deviations: 1010640319825.4994
[2025-11-27 17:31:15] 2025-11-27 16:27:00,290 | INFO     | time since job start (62356s) is within the limit (172800.0s)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,291 | INFO     | mean x: 1764229632.5
[2025-11-27 17:31:15] 2025-11-27 16:27:00,291 | INFO     | mean y: 2290613.2553816047
[2025-11-27 17:31:15] 2025-11-27 16:27:00,291 | INFO     | intersect: -5384387658.079262
[2025-11-27 17:31:15] 2025-11-27 16:27:00,293 | INFO     | chi2: 3.9838137874966875
[2025-11-27 17:31:15] 2025-11-27 16:27:00,294 | INFO     | sum of square deviations: 326167633668.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,314 | INFO     | sum of deviations: 1221876385010.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,314 | INFO     | mean x: 1764229480.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,314 | INFO     | mean y: 2297270.673549656
[2025-11-27 17:31:15] 2025-11-27 16:27:00,315 | INFO     | intersect: -6606789949.625841
[2025-11-27 17:31:15] 2025-11-27 16:27:00,316 | INFO     | chi2: 1.8931861630049003
[2025-11-27 17:31:15] 2025-11-27 16:27:00,316 | INFO     | current chi2=1.8931861630049003 (change=52.47804581261507 %)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,317 | INFO     | sum of square deviations: 321380511353.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,337 | INFO     | sum of deviations: 1237407343995.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,337 | INFO     | mean x: 1764229327.5
[2025-11-27 17:31:15] 2025-11-27 16:27:00,337 | INFO     | mean y: 2297762.3399209487
[2025-11-27 17:31:15] 2025-11-27 16:27:00,338 | INFO     | intersect: -6790492245.832059
[2025-11-27 17:31:15] 2025-11-27 16:27:00,339 | INFO     | chi2: 1.8004389875840818
[2025-11-27 17:31:15] 2025-11-27 16:27:00,339 | INFO     | current chi2=1.8004389875840818 (change=4.8989992232780954 %)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,339 | INFO     | right removable region: 1011
[2025-11-27 17:31:15] 2025-11-27 16:27:00,340 | INFO     | sum of square deviations: 326167633668.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,360 | INFO     | sum of deviations: 833895639520.0001
[2025-11-27 17:31:15] 2025-11-27 16:27:00,361 | INFO     | mean x: 1764229785.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,361 | INFO     | mean y: 2296178.809242871
[2025-11-27 17:31:15] 2025-11-27 16:27:00,361 | INFO     | intersect: -4508217351.54398
[2025-11-27 17:31:15] 2025-11-27 16:27:00,362 | INFO     | chi2: 2.3118976260140514
[2025-11-27 17:31:15] 2025-11-27 16:27:00,363 | INFO     | current chi2=2.3118976260140514 (change=41.96772868074287 %)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,364 | INFO     | sum of square deviations: 321380511353.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,384 | INFO     | sum of deviations: 808436372141.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,384 | INFO     | mean x: 1764229937.5
[2025-11-27 17:31:15] 2025-11-27 16:27:00,384 | INFO     | mean y: 2296990.5197628457
[2025-11-27 17:31:15] 2025-11-27 16:27:00,384 | INFO     | intersect: -4435643705.667786
[2025-11-27 17:31:15] 2025-11-27 16:27:00,385 | INFO     | chi2: 2.301129946810024
[2025-11-27 17:31:15] 2025-11-27 16:27:00,386 | INFO     | current chi2=2.301129946810024 (change=0.4657506925422038 %)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,386 | INFO     | left removable region: 20
[2025-11-27 17:31:15] 2025-11-27 16:27:00,387 | INFO     | sum of square deviations: 301785900240.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,406 | INFO     | sum of deviations: 972466638440.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,406 | INFO     | mean x: 1764229907.0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,406 | INFO     | mean y: 2306154.4268415743
[2025-11-27 17:31:15] 2025-11-27 16:27:00,406 | INFO     | intersect: -5682700089.175667
[2025-11-27 17:31:15] 2025-11-27 16:27:00,408 | INFO     | chi2: 0.08936147832397183
[2025-11-27 17:31:15] 2025-11-27 16:27:00,408 | INFO     | current memory leak: 3.22 B/s (using 991 data points, chi2=0.09)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,409 | INFO     | could have reported an average CPU frequency of 2700 MHz (38 samples)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,410 | INFO     | ..............................
[2025-11-27 17:31:15] 2025-11-27 16:27:00,410 | INFO     | . Timing measurements:
[2025-11-27 17:31:15] 2025-11-27 16:27:00,410 | INFO     | . get job = 0 s
[2025-11-27 17:31:15] 2025-11-27 16:27:00,410 | INFO     | . initial setup = 1 s
[2025-11-27 17:31:15] 2025-11-27 16:27:00,410 | INFO     | . payload setup = 6 s
[2025-11-27 17:31:15] 2025-11-27 16:27:00,410 | INFO     | . stage-in = 0 s
[2025-11-27 17:31:15] 2025-11-27 16:27:00,410 | INFO     | . payload execution = 62320 s
[2025-11-27 17:31:15] 2025-11-27 16:27:00,410 | INFO     | . stage-out = 2 s
[2025-11-27 17:31:15] 2025-11-27 16:27:00,410 | INFO     | . log creation = 0 s
[2025-11-27 17:31:15] 2025-11-27 16:27:00,410 | INFO     | ..............................
[2025-11-27 17:31:15] 2025-11-27 16:27:00,507 | INFO     | 
[2025-11-27 17:31:15] 2025-11-27 16:27:00,508 | INFO     | job summary report
[2025-11-27 17:31:15] 2025-11-27 16:27:00,508 | INFO     | --------------------------------------------------
[2025-11-27 17:31:15] 2025-11-27 16:27:00,508 | INFO     | PanDA job id: 6893852408
[2025-11-27 17:31:15] 2025-11-27 16:27:00,508 | INFO     | task id: 47523449
[2025-11-27 17:31:15] 2025-11-27 16:27:00,508 | INFO     | errors: (none)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:31:15] 2025-11-27 16:27:00,508 | INFO     | pilot state: finished 
[2025-11-27 17:31:15] 2025-11-27 16:27:00,508 | INFO     | transexitcode: 0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,508 | INFO     | exeerrorcode: 0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | exeerrordiag: 
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | exitcode: 0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | exitmsg: OK
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | cpuconsumptiontime: 247050 s
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | nevents: 1000
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | neventsw: 0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | pid: 710986
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | pgrp: 710986
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | corecount: 4
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | event service: False
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | sizes: {0: 2284326, 5: 2284588, 11: 2284644, 62330: 2337572, 62333: 2346588, 62334: 2346644, 62341: 2347018}
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | --------------------------------------------------
[2025-11-27 17:31:15] 2025-11-27 16:27:00,509 | INFO     | 
[2025-11-27 17:31:15] 2025-11-27 16:27:00,510 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-11-27 17:31:15] 2025-11-27 16:27:00,532 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,532 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,532 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,532 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,532 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:31:15] 2025-11-27 16:27:00,534 | INFO     | job 6893852408 has completed (purged errors)
[2025-11-27 17:31:15] 2025-11-27 16:27:00,534 | INFO     | overall cleanup function is called
[2025-11-27 17:31:15] 2025-11-27 16:27:01,546 | INFO     | --- collectZombieJob: --- 10, [710986]
[2025-11-27 17:31:15] 2025-11-27 16:27:01,547 | INFO     | zombie collector waiting for pid 710986
[2025-11-27 17:31:15] 2025-11-27 16:27:01,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:31:15] 2025-11-27 16:27:01,547 | INFO     | collected zombie processes
[2025-11-27 17:31:15] 2025-11-27 16:27:01,547 | INFO     | will attempt to kill all subprocesses of pid=710986
[2025-11-27 17:31:15] 2025-11-27 16:27:01,926 | INFO     | process IDs to be killed: [710986] (in reverse order)
[2025-11-27 17:31:15] 2025-11-27 16:27:02,048 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:31:15] 2025-11-27 16:27:02,048 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:31:15] 2025-11-27 16:27:02,062 | INFO     | did not find any defunct processes belonging to 710986
[2025-11-27 17:31:15] 2025-11-27 16:27:02,076 | INFO     | did not find any defunct processes belonging to 710986
[2025-11-27 17:31:15] 2025-11-27 16:27:02,078 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:31:15] 2025-11-27 16:27:02,078 | INFO     | ready for new job
[2025-11-27 17:31:15] 2025-11-27 16:27:02,078 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:31:15] 2025-11-27 16:27:02,084 | INFO     | ***************************************
[2025-11-27 17:31:15] 2025-11-27 16:27:02,084 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:31:15] 2025-11-27 16:27:02,084 | INFO     | ***************************************
[2025-11-27 17:31:15] 2025-11-27 16:27:02,084 | INFO     | 
[2025-11-27 17:31:15] 2025-11-27 16:27:02,088 | INFO     | architecture information:
[2025-11-27 17:31:15] 2025-11-27 16:27:02,089 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:31:15] 2025-11-27 16:27:02,105 | INFO     | cat /etc/os-release:
[2025-11-27 17:31:15] NAME="CentOS Linux"
[2025-11-27 17:31:15] VERSION="7 (Core)"
[2025-11-27 17:31:15] ID="centos"
[2025-11-27 17:31:15] ID_LIKE="rhel fedora"
[2025-11-27 17:31:15] VERSION_ID="7"
[2025-11-27 17:31:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:31:15] ANSI_COLOR="0;31"
[2025-11-27 17:31:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:31:15] HOME_URL="https://www.centos.org/"
[2025-11-27 17:31:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:31:15] 
[2025-11-27 17:31:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:31:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:31:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:31:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:31:15] 
[2025-11-27 17:31:15] 2025-11-27 16:27:02,105 | INFO     | ***************************************
[2025-11-27 17:31:15] 2025-11-27 16:27:02,608 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-11-27 17:31:15] 2025-11-27 16:27:02,625 | INFO     | sufficient remaining disk space (660436156416 B)
[2025-11-27 17:31:15] 2025-11-27 16:27:02,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:31:15] 2025-11-27 16:27:02,626 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:31:15] 2025-11-27 16:27:02,626 | INFO     | update_server=False
[2025-11-27 17:31:15] 2025-11-27 16:27:02,626 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:31:15] 2025-11-27 16:27:02,861 | INFO     | all data control threads have been joined
[2025-11-27 17:31:15] 2025-11-27 16:27:03,090 | INFO     | all payload control threads have been joined
[2025-11-27 17:31:15] 2025-11-27 16:27:03,109 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 17:31:15] 2025-11-27 16:27:03,110 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 17:31:15] 2025-11-27 16:27:03,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:31:15] 2025-11-27 16:27:03,110 | INFO     | will abort loop
[2025-11-27 17:31:15] 2025-11-27 16:27:03,631 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:03,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:31:15] 2025-11-27 16:27:03,865 | INFO     | [data] control thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:04,089 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:04,095 | INFO     | [payload] control thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:04,114 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:04,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:04,225 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:04,242 | INFO     | all job control threads have been joined
[2025-11-27 17:31:15] 2025-11-27 16:27:04,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:31:15] 2025-11-27 16:27:04,490 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:04,667 | INFO     | [job] validate thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:04,677 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:04,881 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:04,883 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:05,247 | INFO     | [job] control thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:05,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:31:15] 2025-11-27 16:27:05,646 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:06,523 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:08,359 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:31:15] 2025-11-27 16:27:24,377 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:31:15] 2025-11-27 16:27:25,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23121750615872)>', '<ExcThread(monitor, started 23121499199232)>']
[2025-11-27 17:31:15] 2025-11-27 16:27:30,864 | INFO     | all workflow threads have been joined
[2025-11-27 17:31:15] 2025-11-27 16:27:30,865 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:31:15] 2025-11-27 16:27:30,865 | INFO     | traces error code: 0
[2025-11-27 17:31:15] 2025-11-27 16:27:30,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:31:15] 2025-11-27 16:27:33,892 | INFO     | PID=704038 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 17:31:15] 2025-11-27 16:27:33,893 | INFO     | .. there are 3 such processes running
[2025-11-27 17:31:15] 2025-11-27 16:27:33,894 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:31:15] 2025-11-27 16:27:33,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:31:15] 2025-11-27 16:27:33,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:31:15] 2025-11-27 16:27:33,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:31:15] 2025-11-27 16:27:33,895 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 17:31:15] 2025-11-27 16:27:33,895 | INFO     | [monitor] control thread has ended
[2025-11-27 17:31:15] 2025-11-27 16:27:34,074 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:31:15] 2025-11-27 16:27:34,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:31:15] 2025-11-27 16:27:34,080 [wrapper] pilotpid: 704038
[2025-11-27 17:31:15] 2025-11-27 16:27:34,083 [wrapper] Pilot exit status: 0
[2025-11-27 17:31:15] 2025-11-27 16:27:34,095 [wrapper] pandaids: 6893852408
[2025-11-27 17:31:15] 2025-11-27 16:27:34,172 [wrapper] cleanup supervisor_pilot 1482555 704039
[2025-11-27 17:31:15] 2025-11-27 16:27:34,176 [wrapper] Test setup, not cleaning
[2025-11-27 17:31:15] 2025-11-27 16:27:34,179 [wrapper] apfmon messages muted
[2025-11-27 17:31:15] 2025-11-27 16:27:34,182 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:31:15] 2025-11-27 16:27:34,185 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:31:15]  *** Error codes and diagnostics ***
[2025-11-27 17:31:15]     "exeErrorCode": 0,
[2025-11-27 17:31:15]     "exeErrorDiag": "",
[2025-11-27 17:31:15]     "pilotErrorCode": 0,
[2025-11-27 17:31:15]     "pilotErrorDiag": "",
[2025-11-27 17:31:15]  *** Listing of results directory ***
[2025-11-27 17:31:15] total 1322664
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc    576529 Nov 20 12:54 pilot3.tar.gz
[2025-11-27 17:31:15] -rwx------ 1 boinc boinc     36292 Nov 20 12:56 runpilot2-wrapper.sh
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc      5112 Nov 20 12:56 queuedata.json
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc       100 Nov 27 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:31:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 00:07 run_atlas
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc       105 Nov 27 00:07 job.xml
[2025-11-27 17:31:15] -rw-r--r-- 2 boinc boinc 408531965 Nov 27 00:07 EVNT.47493127._000379.pool.root.1
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc      6635 Nov 27 00:07 init_data.xml
[2025-11-27 17:31:15] -rw-r--r-- 2 boinc boinc     15847 Nov 27 00:07 start_atlas.sh
[2025-11-27 17:31:15] drwxrwx--x 2 boinc boinc      4096 Nov 27 00:07 shared
[2025-11-27 17:31:15] -rw-r--r-- 2 boinc boinc    590102 Nov 27 00:07 input.tar.gz
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc         0 Nov 27 00:07 boinc_lockfile
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc      2786 Nov 27 00:07 pandaJob.out
[2025-11-27 17:31:15] -rw------- 1 boinc boinc    991546 Nov 27 00:07 agis_schedconf.cvmfs.json
[2025-11-27 17:31:15] drwx------ 5 boinc boinc      4096 Nov 27 00:07 pilot3
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc       532 Nov 27 17:19 boinc_task_state.xml
[2025-11-27 17:31:15] -rw------- 1 boinc boinc 920998894 Nov 27 17:26 HITS.47523449._003788.pool.root.1
[2025-11-27 17:31:15] -rw------- 1 boinc boinc        95 Nov 27 17:26 pilot_heartbeat.json
[2025-11-27 17:31:15] -rw------- 1 boinc boinc      1045 Nov 27 17:26 memory_monitor_summary.json
[2025-11-27 17:31:15] -rw------- 1 boinc boinc   1516240 Nov 27 17:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:31:15] -rw------- 1 boinc boinc   1756572 Nov 27 17:26 log.47523449._003788.job.log.tgz.1
[2025-11-27 17:31:15] -rw------- 1 boinc boinc      8625 Nov 27 17:27 heartbeat.json
[2025-11-27 17:31:15] -rw------- 1 boinc boinc       891 Nov 27 17:27 pilotlog.txt
[2025-11-27 17:31:15] -rw------- 1 boinc boinc   8724668 Nov 27 17:27 log.47523449._003788.job.log.1
[2025-11-27 17:31:15] -rw------- 1 boinc boinc       353 Nov 27 17:27 output.list
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc       620 Nov 27 17:27 runtime_log
[2025-11-27 17:31:15] -rw------- 1 boinc boinc  10496000 Nov 27 17:27 result.tar.gz
[2025-11-27 17:31:15] -rw------- 1 boinc boinc       670 Nov 27 17:27 yAQKDmrRIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZaGKDmCwFLHn.diag
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc      9206 Nov 27 17:27 runtime_log.err
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc        28 Nov 27 17:31 wrapper_checkpoint.txt
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc      8192 Nov 27 17:31 boinc_mmap_file
[2025-11-27 17:31:15] -rw-r--r-- 1 boinc boinc     21004 Nov 27 17:31 stderr.txt
[2025-11-27 17:31:15] HITS file was successfully produced:
[2025-11-27 17:31:15] -rw------- 1 boinc boinc 920998894 Nov 27 17:26 shared/HITS.pool.root.1
[2025-11-27 17:31:15]  *** Contents of shared directory: ***
[2025-11-27 17:31:15] total 1309232
[2025-11-27 17:31:15] -rw-r--r-- 2 boinc boinc 408531965 Nov 27 00:07 ATLAS.root_0
[2025-11-27 17:31:15] -rw-r--r-- 2 boinc boinc     15847 Nov 27 00:07 start_atlas.sh
[2025-11-27 17:31:15] -rw-r--r-- 2 boinc boinc    590102 Nov 27 00:07 input.tar.gz
[2025-11-27 17:31:15] -rw------- 1 boinc boinc 920998894 Nov 27 17:26 HITS.pool.root.1
[2025-11-27 17:31:15] -rw------- 1 boinc boinc  10496000 Nov 27 17:27 result.tar.gz
17:31:16 (700276): run_atlas exited; CPU time 249382.109399
17:31:16 (700276): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN