Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:57:06 (4101336): wrapper (7.7.26015): starting
03:57:06 (4101336): wrapper: running run_atlas (--nthreads 10)
[2025-11-21 03:57:06] Arguments: --nthreads 10
[2025-11-21 03:57:06] Threads: 10
[2025-11-21 03:57:06] Checking for CVMFS
[2025-11-21 03:57:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 03:57:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 03:57:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 03:57:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 03:57:06] 2.13.2.0 6633 26315 173208 153114 1 98 36756155 40960001 4340 16776704 0 16006339 99.655 10885147 28189 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 03:57:06] CVMFS is ok
[2025-11-21 03:57:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 03:57:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 03:57:06] Further information can be found at the LHC@home message board.
[2025-11-21 03:57:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 03:57:06] Checking for apptainer binary...
[2025-11-21 03:57:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 03:57:06] Running /usr/bin/apptainer --version
[2025-11-21 03:57:06] apptainer version 1.4.4-1.el9
[2025-11-21 03:57:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 03:57:06] c-211-10.aglt2.org
[2025-11-21 03:57:06] apptainer works
[2025-11-21 03:57:06] Set ATHENA_PROC_NUMBER=10
[2025-11-21 03:57:06] Set ATHENA_CORE_NUMBER=10
[2025-11-21 03:57:06] Starting ATLAS job with PandaID=6893870398
[2025-11-21 03:57:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 17:29:06]  *** The last 200 lines of the pilot log: ***
[2025-11-21 17:29:06] 2025-11-21 22:28:19,748 | INFO     | .. there are 12 such processes running
[2025-11-21 17:29:06] 2025-11-21 22:28:20,795 | INFO     | time since job start (48662s) is within the limit (172800.0s)
[2025-11-21 17:29:06] 2025-11-21 22:28:21,779 | INFO     | monitor loop #3106: job 0:6893870398 is in state 'finished'
[2025-11-21 17:29:06] 2025-11-21 22:28:21,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:29:06] 2025-11-21 22:28:22,803 | INFO     | time since job start (48664s) is within the limit (172800.0s)
[2025-11-21 17:29:06] 2025-11-21 22:28:24,284 | INFO     | monitor loop #3107: job 0:6893870398 is in state 'finished'
[2025-11-21 17:29:06] 2025-11-21 22:28:24,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:29:06] 2025-11-21 22:28:24,810 | INFO     | time since job start (48666s) is within the limit (172800.0s)
[2025-11-21 17:29:06] 2025-11-21 22:28:26,788 | INFO     | monitor loop #3108: job 0:6893870398 is in state 'finished'
[2025-11-21 17:29:06] 2025-11-21 22:28:26,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:29:06] 2025-11-21 22:28:26,818 | INFO     | time since job start (48668s) is within the limit (172800.0s)
[2025-11-21 17:29:06] 2025-11-21 22:28:28,825 | INFO     | time since job start (48670s) is within the limit (172800.0s)
[2025-11-21 17:29:06] 2025-11-21 22:28:29,374 | INFO     | monitor loop #3109: job 0:6893870398 is in state 'finished'
[2025-11-21 17:29:06] 2025-11-21 22:28:29,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:29:06] 2025-11-21 22:28:30,832 | INFO     | time since job start (48672s) is within the limit (172800.0s)
[2025-11-21 17:29:06] 2025-11-21 22:28:31,880 | INFO     | monitor loop #3110: job 0:6893870398 is in state 'finished'
[2025-11-21 17:29:06] 2025-11-21 22:28:31,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:29:06] 2025-11-21 22:28:32,200 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 17:29:06] 2025-11-21 22:28:32,216 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2579.0035625000005
[2025-11-21 17:29:06] 2025-11-21 22:28:32,238 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893870398/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 17:29:06] 2025-11-21 22:28:32,238 | INFO     | extracted standard info from prmon json
[2025-11-21 17:29:06] 2025-11-21 22:28:32,239 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 17:29:06] 2025-11-21 22:28:32,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 17:29:06] 2025-11-21 22:28:32,277 | INFO     | fitting pss+swap vs Time
[2025-11-21 17:29:06] 2025-11-21 22:28:32,279 | INFO     | sum of square deviations: 157023688701.92728
[2025-11-21 17:29:06] 2025-11-21 22:28:32,313 | INFO     | sum of deviations: -1789409476457.6824
[2025-11-21 17:29:06] 2025-11-21 22:28:32,313 | INFO     | mean x: 1763739744.6474278
[2025-11-21 17:29:06] 2025-11-21 22:28:32,313 | INFO     | mean y: 3099680.3249686323
[2025-11-21 17:29:06] 2025-11-21 22:28:32,313 | INFO     | intersect: 20102312984.810432
[2025-11-21 17:29:06] 2025-11-21 22:28:32,314 | INFO     | chi2: 45.6190022089668
[2025-11-21 17:29:06] 2025-11-21 22:28:32,316 | INFO     | sum of square deviations: 154088314376.66156
[2025-11-21 17:29:06] 2025-11-21 22:28:32,350 | INFO     | sum of deviations: -1485991257807.914
[2025-11-21 17:29:06] 2025-11-21 22:28:32,350 | INFO     | mean x: 1763739592.1641414
[2025-11-21 17:29:06] 2025-11-21 22:28:32,350 | INFO     | mean y: 3115435.376262626
[2025-11-21 17:29:06] 2025-11-21 22:28:32,351 | INFO     | intersect: 17012202890.242832
[2025-11-21 17:29:06] 2025-11-21 22:28:32,352 | INFO     | chi2: 41.28283364616569
[2025-11-21 17:29:06] 2025-11-21 22:28:32,352 | INFO     | current chi2=41.28283364616569 (change=9.505180632707471 %)
[2025-11-21 17:29:06] 2025-11-21 22:28:32,352 | INFO     | right removable region: 791
[2025-11-21 17:29:06] 2025-11-21 22:28:32,357 | INFO     | sum of square deviations: 154087124153.31323
[2025-11-21 17:29:06] 2025-11-21 22:28:32,390 | INFO     | sum of deviations: -1989607410564.2534
[2025-11-21 17:29:06] 2025-11-21 22:28:32,390 | INFO     | mean x: 1763739897.161616
[2025-11-21 17:29:06] 2025-11-21 22:28:32,390 | INFO     | mean y: 3110055.1035353537
[2025-11-21 17:29:06] 2025-11-21 22:28:32,390 | INFO     | intersect: 22776914089.56043
[2025-11-21 17:29:06] 2025-11-21 22:28:32,391 | INFO     | chi2: 43.83130041701832
[2025-11-21 17:29:06] 2025-11-21 22:28:32,392 | INFO     | current chi2=43.83130041701832 (change=3.9187656576957983 %)
[2025-11-21 17:29:06] 2025-11-21 22:28:32,392 | INFO     | left removable region: 10
[2025-11-21 17:29:06] 2025-11-21 22:28:32,397 | INFO     | sum of square deviations: 147757451397.08054
[2025-11-21 17:29:06] 2025-11-21 22:28:32,429 | INFO     | sum of deviations: -1690776843998.6594
[2025-11-21 17:29:06] 2025-11-21 22:28:32,429 | INFO     | mean x: 1763739866.696543
[2025-11-21 17:29:06] 2025-11-21 22:28:32,430 | INFO     | mean y: 3131888.385403329
[2025-11-21 17:29:06] 2025-11-21 22:28:32,430 | INFO     | intersect: 20185467853.51913
[2025-11-21 17:29:06] 2025-11-21 22:28:32,431 | INFO     | chi2: 38.697495389880686
[2025-11-21 17:29:06] 2025-11-21 22:28:32,431 | INFO     | current memory leak: -11.44 B/s (using 781 data points, chi2=38.70)
[2025-11-21 17:29:06] 2025-11-21 22:28:32,432 | INFO     | could have reported an average CPU frequency of 2638 MHz (30 samples)
[2025-11-21 17:29:06] 2025-11-21 22:28:32,432 | INFO     | ..............................
[2025-11-21 17:29:06] 2025-11-21 22:28:32,432 | INFO     | . Timing measurements:
[2025-11-21 17:29:06] 2025-11-21 22:28:32,437 | INFO     | . get job = 0 s
[2025-11-21 17:29:06] 2025-11-21 22:28:32,437 | INFO     | . initial setup = 2 s
[2025-11-21 17:29:06] 2025-11-21 22:28:32,437 | INFO     | . payload setup = 5 s
[2025-11-21 17:29:06] 2025-11-21 22:28:32,437 | INFO     | . stage-in = 0 s
[2025-11-21 17:29:06] 2025-11-21 22:28:32,437 | INFO     | . payload execution = 48609 s
[2025-11-21 17:29:06] 2025-11-21 22:28:32,437 | INFO     | . stage-out = 8 s
[2025-11-21 17:29:06] 2025-11-21 22:28:32,438 | INFO     | . log creation = 1 s
[2025-11-21 17:29:06] 2025-11-21 22:28:32,438 | INFO     | ..............................
[2025-11-21 17:29:06] 2025-11-21 22:28:32,653 | INFO     | 
[2025-11-21 17:29:06] 2025-11-21 22:28:32,653 | INFO     | job summary report
[2025-11-21 17:29:06] 2025-11-21 22:28:32,653 | INFO     | --------------------------------------------------
[2025-11-21 17:29:06] 2025-11-21 22:28:32,653 | INFO     | PanDA job id: 6893870398
[2025-11-21 17:29:06] 2025-11-21 22:28:32,654 | INFO     | task id: 47523449
[2025-11-21 17:29:06] 2025-11-21 22:28:32,654 | INFO     | errors: (none)
[2025-11-21 17:29:06] 2025-11-21 22:28:32,654 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 17:29:06] 2025-11-21 22:28:32,654 | INFO     | pilot state: finished 
[2025-11-21 17:29:06] 2025-11-21 22:28:32,654 | INFO     | transexitcode: 0
[2025-11-21 17:29:06] 2025-11-21 22:28:32,654 | INFO     | exeerrorcode: 0
[2025-11-21 17:29:06] 2025-11-21 22:28:32,654 | INFO     | exeerrordiag: 
[2025-11-21 17:29:06] 2025-11-21 22:28:32,654 | INFO     | exitcode: 0
[2025-11-21 17:29:06] 2025-11-21 22:28:32,654 | INFO     | exitmsg: OK
[2025-11-21 17:29:06] 2025-11-21 22:28:32,655 | INFO     | cpuconsumptiontime: 323000 s
[2025-11-21 17:29:06] 2025-11-21 22:28:32,655 | INFO     | nevents: 1000
[2025-11-21 17:29:06] 2025-11-21 22:28:32,655 | INFO     | neventsw: 0
[2025-11-21 17:29:06] 2025-11-21 22:28:32,655 | INFO     | pid: 4112650
[2025-11-21 17:29:06] 2025-11-21 22:28:32,655 | INFO     | pgrp: 4112650
[2025-11-21 17:29:06] 2025-11-21 22:28:32,655 | INFO     | corecount: 10
[2025-11-21 17:29:06] 2025-11-21 22:28:32,655 | INFO     | event service: False
[2025-11-21 17:29:06] 2025-11-21 22:28:32,655 | INFO     | sizes: {0: 2298635, 1: 2298834, 5: 2299096, 11: 2299152, 48619: 2346769, 48620: 2346768, 48629: 2355946, 48630: 2356002, 48659: 2356248}
[2025-11-21 17:29:06] 2025-11-21 22:28:32,655 | INFO     | --------------------------------------------------
[2025-11-21 17:29:06] 2025-11-21 22:28:32,656 | INFO     | 
[2025-11-21 17:29:06] 2025-11-21 22:28:32,656 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 17:29:06] 2025-11-21 22:28:32,735 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,735 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,736 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,736 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,736 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 17:29:06] 2025-11-21 22:28:32,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 17:29:06] 2025-11-21 22:28:32,739 | INFO     | job 6893870398 has completed (purged errors)
[2025-11-21 17:29:06] 2025-11-21 22:28:32,739 | INFO     | overall cleanup function is called
[2025-11-21 17:29:06] 2025-11-21 22:28:33,775 | INFO     | --- collectZombieJob: --- 10, [4112650]
[2025-11-21 17:29:06] 2025-11-21 22:28:33,776 | INFO     | zombie collector waiting for pid 4112650
[2025-11-21 17:29:06] 2025-11-21 22:28:33,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 17:29:06] 2025-11-21 22:28:33,777 | INFO     | collected zombie processes
[2025-11-21 17:29:06] 2025-11-21 22:28:33,778 | INFO     | will attempt to kill all subprocesses of pid=4112650
[2025-11-21 17:29:06] 2025-11-21 22:28:35,185 | INFO     | process IDs to be killed: [4112650] (in reverse order)
[2025-11-21 17:29:06] 2025-11-21 22:28:35,324 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 17:29:06] 2025-11-21 22:28:35,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 17:29:06] 2025-11-21 22:28:35,350 | INFO     | did not find any defunct processes belonging to 4112650
[2025-11-21 17:29:06] 2025-11-21 22:28:35,363 | INFO     | did not find any defunct processes belonging to 4112650
[2025-11-21 17:29:06] 2025-11-21 22:28:35,369 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 17:29:06] 2025-11-21 22:28:35,369 | INFO     | ready for new job
[2025-11-21 17:29:06] 2025-11-21 22:28:35,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 17:29:06] 2025-11-21 22:28:35,377 | INFO     | ***************************************
[2025-11-21 17:29:06] 2025-11-21 22:28:35,378 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 17:29:06] 2025-11-21 22:28:35,378 | INFO     | ***************************************
[2025-11-21 17:29:06] 2025-11-21 22:28:35,378 | INFO     | 
[2025-11-21 17:29:06] 2025-11-21 22:28:35,381 | INFO     | architecture information:
[2025-11-21 17:29:06] 2025-11-21 22:28:35,385 | INFO     | executing command: cat /etc/os-release
[2025-11-21 17:29:06] 2025-11-21 22:28:35,428 | INFO     | cat /etc/os-release:
[2025-11-21 17:29:06] NAME="CentOS Linux"
[2025-11-21 17:29:06] VERSION="7 (Core)"
[2025-11-21 17:29:06] ID="centos"
[2025-11-21 17:29:06] ID_LIKE="rhel fedora"
[2025-11-21 17:29:06] VERSION_ID="7"
[2025-11-21 17:29:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 17:29:06] ANSI_COLOR="0;31"
[2025-11-21 17:29:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 17:29:06] HOME_URL="https://www.centos.org/"
[2025-11-21 17:29:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 17:29:06] 
[2025-11-21 17:29:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 17:29:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 17:29:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 17:29:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 17:29:06] 
[2025-11-21 17:29:06] 2025-11-21 22:28:35,428 | INFO     | ***************************************
[2025-11-21 17:29:06] 2025-11-21 22:28:35,932 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 17:29:06] 2025-11-21 22:28:36,115 | INFO     | sufficient remaining disk space (57404293120 B)
[2025-11-21 17:29:06] 2025-11-21 22:28:36,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 17:29:06] 2025-11-21 22:28:36,116 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 17:29:06] 2025-11-21 22:28:36,116 | INFO     | update_server=False
[2025-11-21 17:29:06] 2025-11-21 22:28:36,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 17:29:06] 2025-11-21 22:28:36,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 17:29:06] 2025-11-21 22:28:36,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 17:29:06] 2025-11-21 22:28:36,127 | INFO     | aborting loop
[2025-11-21 17:29:06] 2025-11-21 22:28:36,347 | INFO     | all data control threads have been joined
[2025-11-21 17:29:06] 2025-11-21 22:28:36,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 17:29:06] 2025-11-21 22:28:37,122 | INFO     | [job] retrieve thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:37,142 | INFO     | [job] job monitor thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:37,176 | INFO     | all payload control threads have been joined
[2025-11-21 17:29:06] 2025-11-21 22:28:37,353 | INFO     | [data] control thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:37,384 | INFO     | all job control threads have been joined
[2025-11-21 17:29:06] 2025-11-21 22:28:37,652 | INFO     | [job] validate thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:37,656 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:37,656 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:37,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 17:29:06] 2025-11-21 22:28:37,806 | INFO     | [payload] validate_post thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:38,061 | INFO     | [payload] failed_post thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:38,123 | INFO     | [data] copytool_out thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:38,183 | INFO     | [payload] control thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:38,194 | INFO     | [data] copytool_in thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:38,204 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:38,210 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:38,390 | INFO     | [job] control thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:38,731 | INFO     | [job] queue monitor thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:40,616 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 17:29:06] 2025-11-21 22:28:44,025 | INFO     | [monitor] cgroup control has ended
[2025-11-21 17:29:06] 2025-11-21 22:28:45,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494715168576)>', '<ExcThread(monitor, started 140493933500160)>']
[2025-11-21 17:29:06] 2025-11-21 22:28:50,698 | INFO     | all workflow threads have been joined
[2025-11-21 17:29:06] 2025-11-21 22:28:50,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 17:29:06] 2025-11-21 22:28:50,703 | INFO     | traces error code: 0
[2025-11-21 17:29:06] 2025-11-21 22:28:50,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 17:29:06] 2025-11-21 22:29:04,588 | INFO     | PID=4105176 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 17:29:06] 2025-11-21 22:29:04,589 | INFO     | .. there are 12 such processes running
[2025-11-21 17:29:06] 2025-11-21 22:29:04,589 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 17:29:06] 2025-11-21 22:29:04,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 17:29:06] 2025-11-21 22:29:04,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 17:29:06] 2025-11-21 22:29:04,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 17:29:06] 2025-11-21 22:29:04,590 | INFO     | [monitor] control thread has ended
[2025-11-21 17:29:06] 2025-11-21 22:29:04,747 [wrapper] ==== pilot stdout END ====
[2025-11-21 17:29:06] 2025-11-21 22:29:04,794 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 17:29:06] 2025-11-21 22:29:04,802 [wrapper] pilotpid: 4105176
[2025-11-21 17:29:06] 2025-11-21 22:29:04,814 [wrapper] Pilot exit status: 0
[2025-11-21 17:29:06] 2025-11-21 22:29:04,963 [wrapper] pandaids: 6893870398
[2025-11-21 17:29:06] 2025-11-21 22:29:05,462 [wrapper] cleanup supervisor_pilot 1333886 4105177
[2025-11-21 17:29:06] 2025-11-21 22:29:05,511 [wrapper] Test setup, not cleaning
[2025-11-21 17:29:06] 2025-11-21 22:29:05,539 [wrapper] apfmon messages muted
[2025-11-21 17:29:06] 2025-11-21 22:29:05,561 [wrapper] ==== wrapper stdout END ====
[2025-11-21 17:29:06] 2025-11-21 22:29:05,590 [wrapper] ==== wrapper stderr END ====
[2025-11-21 17:29:06]  *** Error codes and diagnostics ***
[2025-11-21 17:29:06]     "exeErrorCode": 0,
[2025-11-21 17:29:06]     "exeErrorDiag": "",
[2025-11-21 17:29:06]     "pilotErrorCode": 0,
[2025-11-21 17:29:06]     "pilotErrorDiag": "",
[2025-11-21 17:29:06]  *** Listing of results directory ***
[2025-11-21 17:29:06] total 1327100
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 09:50 pilot3.tar.gz
[2025-11-21 17:29:06] -rwx------. 1 boincer umatlas     36292 Nov 20 09:55 runpilot2-wrapper.sh
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 09:55 queuedata.json
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas       100 Nov 21 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 17:29:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 03:57 run_atlas
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas       105 Nov 21 03:57 job.xml
[2025-11-21 17:29:06] -rw-r--r--. 2 boincer umatlas 409427006 Nov 21 03:57 EVNT.47493127._000653.pool.root.1
[2025-11-21 17:29:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 03:57 start_atlas.sh
[2025-11-21 17:29:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 03:57 shared
[2025-11-21 17:29:06] -rw-r--r--. 2 boincer umatlas    590098 Nov 21 03:57 input.tar.gz
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas         0 Nov 21 03:57 boinc_lockfile
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 03:57 pandaJob.out
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas        57 Nov 21 03:57 setup.sh.local
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas    989817 Nov 21 03:57 agis_schedconf.cvmfs.json
[2025-11-21 17:29:06] drwx------. 5 boincer umatlas      4096 Nov 21 03:57 pilot3
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas       533 Nov 21 15:59 boinc_task_state.xml
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas      6615 Nov 21 17:18 init_data.xml
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas 928398772 Nov 21 17:25 HITS.47523449._006529.pool.root.1
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas      1063 Nov 21 17:27 memory_monitor_summary.json
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas   1526164 Nov 21 17:27 agis_ddmendpoints.agis.ALL.json
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas   2225547 Nov 21 17:28 log.47523449._006529.job.log.tgz.1
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas        95 Nov 21 17:28 pilot_heartbeat.json
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas      8637 Nov 21 17:28 heartbeat.json
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas       823 Nov 21 17:29 pilotlog.txt
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas   6379985 Nov 21 17:29 log.47523449._006529.job.log.1
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas       353 Nov 21 17:29 output.list
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas        29 Nov 21 17:29 wrapper_checkpoint.txt
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas       620 Nov 21 17:29 runtime_log
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas   8622080 Nov 21 17:29 result.tar.gz
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 17:29 boinc_mmap_file
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas      9345 Nov 21 17:29 runtime_log.err
[2025-11-21 17:29:06] -rw-------. 1 boincer umatlas       661 Nov 21 17:29 13iLDmAFLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEAIKDmPe5Jam.diag
[2025-11-21 17:29:06] -rw-r--r--. 1 boincer umatlas     21770 Nov 21 17:29 stderr.txt
[2025-11-21 17:29:07] HITS file was successfully produced:
[2025-11-21 17:29:07] -rw-------. 1 boincer umatlas 928398772 Nov 21 17:25 shared/HITS.pool.root.1
[2025-11-21 17:29:07]  *** Contents of shared directory: ***
[2025-11-21 17:29:07] total 1315492
[2025-11-21 17:29:07] -rw-r--r--. 2 boincer umatlas 409427006 Nov 21 03:57 ATLAS.root_0
[2025-11-21 17:29:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 03:57 start_atlas.sh
[2025-11-21 17:29:07] -rw-r--r--. 2 boincer umatlas    590098 Nov 21 03:57 input.tar.gz
[2025-11-21 17:29:07] -rw-------. 1 boincer umatlas 928398772 Nov 21 17:25 HITS.pool.root.1
[2025-11-21 17:29:07] -rw-------. 1 boincer umatlas   8622080 Nov 21 17:29 result.tar.gz
17:29:08 (4101336): run_atlas exited; CPU time 323872.960104
17:29:08 (4101336): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN