Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:49:23 (3837434): wrapper (7.7.26015): starting
20:49:23 (3837434): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 20:49:23] Arguments: --nthreads 8
[2025-11-20 20:49:23] Threads: 8
[2025-11-20 20:49:23] Checking for CVMFS
[2025-11-20 20:49:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:49:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:49:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:49:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:49:25] 2.13.3.0 12846 22164 227896 153103 0 398 24353905 32935937 19823 16776704 0 97558079 99.427 129628481 37309 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-20 20:49:25] CVMFS is ok
[2025-11-20 20:49:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 20:49:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 20:49:25] Further information can be found at the LHC@home message board.
[2025-11-20 20:49:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:49:25] Checking for apptainer binary...
[2025-11-20 20:49:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:49:25] Running /usr/bin/apptainer --version
[2025-11-20 20:49:25] apptainer version 1.4.4-1.el9
[2025-11-20 20:49:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:49:26] c7-16-9.aglt2.org
[2025-11-20 20:49:26] apptainer works
[2025-11-20 20:49:26] Set ATHENA_PROC_NUMBER=8
[2025-11-20 20:49:26] Set ATHENA_CORE_NUMBER=8
[2025-11-20 20:49:26] Starting ATLAS job with PandaID=6893842401
[2025-11-20 20:49:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 09:28:43]  *** The last 200 lines of the pilot log: ***
[2025-11-21 09:28:43] 2025-11-21 14:27:48,551 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 09:28:43] 2025-11-21 14:27:48,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 09:28:43] 2025-11-21 14:27:48,563 | INFO     | fitting pss+swap vs Time
[2025-11-21 09:28:43] 2025-11-21 14:27:48,564 | INFO     | sum of square deviations: 127696180573.98778
[2025-11-21 09:28:43] 2025-11-21 14:27:48,576 | INFO     | sum of deviations: 1299572266589.5703
[2025-11-21 09:28:43] 2025-11-21 14:27:48,577 | INFO     | mean x: 1763712539.2459676
[2025-11-21 09:28:43] 2025-11-21 14:27:48,577 | INFO     | mean y: 2868288.3575268816
[2025-11-21 09:28:43] 2025-11-21 14:27:48,577 | INFO     | intersect: -17946547989.69858
[2025-11-21 09:28:43] 2025-11-21 14:27:48,577 | INFO     | chi2: 9.88474303565639
[2025-11-21 09:28:43] 2025-11-21 14:27:48,578 | INFO     | sum of square deviations: 125138980966.18657
[2025-11-21 09:28:43] 2025-11-21 14:27:48,589 | INFO     | sum of deviations: 1531222277339.9954
[2025-11-21 09:28:43] 2025-11-21 14:27:48,589 | INFO     | mean x: 1763712386.751015
[2025-11-21 09:28:43] 2025-11-21 14:27:48,589 | INFO     | mean y: 2882098.0054127197
[2025-11-21 09:28:43] 2025-11-21 14:27:48,589 | INFO     | intersect: -21578208594.617203
[2025-11-21 09:28:43] 2025-11-21 14:27:48,590 | INFO     | chi2: 7.058484246224606
[2025-11-21 09:28:43] 2025-11-21 14:27:48,590 | INFO     | current chi2=7.058484246224606 (change=28.59213212965539 %)
[2025-11-21 09:28:43] 2025-11-21 14:27:48,591 | INFO     | sum of square deviations: 122616064060.86621
[2025-11-21 09:28:43] 2025-11-21 14:27:48,601 | INFO     | sum of deviations: 1541634868589.3655
[2025-11-21 09:28:43] 2025-11-21 14:27:48,602 | INFO     | mean x: 1763712234.253406
[2025-11-21 09:28:43] 2025-11-21 14:27:48,602 | INFO     | mean y: 2882719.3528610356
[2025-11-21 09:28:43] 2025-11-21 14:27:48,602 | INFO     | intersect: -22172028042.201214
[2025-11-21 09:28:43] 2025-11-21 14:27:48,602 | INFO     | chi2: 6.940259776422365
[2025-11-21 09:28:43] 2025-11-21 14:27:48,603 | INFO     | current chi2=6.940259776422365 (change=1.6749271611036933 %)
[2025-11-21 09:28:43] 2025-11-21 14:27:48,603 | INFO     | right removable region: 733
[2025-11-21 09:28:43] 2025-11-21 14:27:48,603 | INFO     | sum of square deviations: 125138642416.18655
[2025-11-21 09:28:43] 2025-11-21 14:27:48,614 | INFO     | sum of deviations: 1006006659353.6678
[2025-11-21 09:28:43] 2025-11-21 14:27:48,614 | INFO     | mean x: 1763712691.751015
[2025-11-21 09:28:43] 2025-11-21 14:27:48,614 | INFO     | mean y: 2885790.4438430313
[2025-11-21 09:28:43] 2025-11-21 14:27:48,614 | INFO     | intersect: -14175841729.925987
[2025-11-21 09:28:43] 2025-11-21 14:27:48,615 | INFO     | chi2: 5.755704170934292
[2025-11-21 09:28:43] 2025-11-21 14:27:48,615 | INFO     | current chi2=5.755704170934292 (change=41.771838173514155 %)
[2025-11-21 09:28:43] 2025-11-21 14:27:48,616 | INFO     | sum of square deviations: 122615476995.84737
[2025-11-21 09:28:43] 2025-11-21 14:27:48,626 | INFO     | sum of deviations: 795603218426.3796
[2025-11-21 09:28:43] 2025-11-21 14:27:48,627 | INFO     | mean x: 1763712844.2561307
[2025-11-21 09:28:43] 2025-11-21 14:27:48,627 | INFO     | mean y: 2898501.4713896457
[2025-11-21 09:28:43] 2025-11-21 14:27:48,627 | INFO     | intersect: -11441134908.09276
[2025-11-21 09:28:43] 2025-11-21 14:27:48,627 | INFO     | chi2: 3.7598219006123546
[2025-11-21 09:28:43] 2025-11-21 14:27:48,628 | INFO     | current chi2=3.7598219006123546 (change=34.67659579171799 %)
[2025-11-21 09:28:43] 2025-11-21 14:27:48,628 | INFO     | sum of square deviations: 120126496402.99054
[2025-11-21 09:28:43] 2025-11-21 14:27:48,639 | INFO     | sum of deviations: 689956707013.5262
[2025-11-21 09:28:43] 2025-11-21 14:27:48,639 | INFO     | mean x: 1763712996.7599452
[2025-11-21 09:28:43] 2025-11-21 14:27:48,639 | INFO     | mean y: 2904964.16872428
[2025-11-21 09:28:43] 2025-11-21 14:27:48,639 | INFO     | intersect: -10127130022.277077
[2025-11-21 09:28:43] 2025-11-21 14:27:48,640 | INFO     | chi2: 3.223181457310745
[2025-11-21 09:28:43] 2025-11-21 14:27:48,640 | INFO     | current chi2=3.223181457310745 (change=14.273028283978235 %)
[2025-11-21 09:28:43] 2025-11-21 14:27:48,640 | INFO     | left removable region: 30
[2025-11-21 09:28:43] 2025-11-21 14:27:48,640 | INFO     | sum of square deviations: 107726003298.12805
[2025-11-21 09:28:43] 2025-11-21 14:27:48,650 | INFO     | sum of deviations: 803768137825.2594
[2025-11-21 09:28:43] 2025-11-21 14:27:48,650 | INFO     | mean x: 1763713118.7709816
[2025-11-21 09:28:43] 2025-11-21 14:27:48,650 | INFO     | mean y: 2928377.1009957325
[2025-11-21 09:28:43] 2025-11-21 14:27:48,650 | INFO     | intersect: -13156535129.674868
[2025-11-21 09:28:43] 2025-11-21 14:27:48,651 | INFO     | chi2: 0.10520796641337558
[2025-11-21 09:28:43] 2025-11-21 14:27:48,651 | INFO     | current memory leak: 7.46 B/s (using 703 data points, chi2=0.11)
[2025-11-21 09:28:43] 2025-11-21 14:27:48,652 | INFO     | could have reported an average CPU frequency of 3167 MHz (28 samples)
[2025-11-21 09:28:43] 2025-11-21 14:27:48,652 | INFO     | ..............................
[2025-11-21 09:28:43] 2025-11-21 14:27:48,652 | INFO     | . Timing measurements:
[2025-11-21 09:28:43] 2025-11-21 14:27:48,652 | INFO     | . get job = 0 s
[2025-11-21 09:28:43] 2025-11-21 14:27:48,652 | INFO     | . initial setup = 3 s
[2025-11-21 09:28:43] 2025-11-21 14:27:48,652 | INFO     | . payload setup = 21 s
[2025-11-21 09:28:43] 2025-11-21 14:27:48,653 | INFO     | . stage-in = 0 s
[2025-11-21 09:28:43] 2025-11-21 14:27:48,653 | INFO     | . payload execution = 45376 s
[2025-11-21 09:28:43] 2025-11-21 14:27:48,653 | INFO     | . stage-out = 3 s
[2025-11-21 09:28:43] 2025-11-21 14:27:48,653 | INFO     | . log creation = 0 s
[2025-11-21 09:28:43] 2025-11-21 14:27:48,653 | INFO     | ..............................
[2025-11-21 09:28:43] 2025-11-21 14:27:48,734 | INFO     | 
[2025-11-21 09:28:43] 2025-11-21 14:27:48,735 | INFO     | job summary report
[2025-11-21 09:28:43] 2025-11-21 14:27:48,735 | INFO     | --------------------------------------------------
[2025-11-21 09:28:43] 2025-11-21 14:27:48,735 | INFO     | PanDA job id: 6893842401
[2025-11-21 09:28:43] 2025-11-21 14:27:48,735 | INFO     | task id: 47523449
[2025-11-21 09:28:43] 2025-11-21 14:27:48,735 | INFO     | errors: (none)
[2025-11-21 09:28:43] 2025-11-21 14:27:48,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 09:28:43] 2025-11-21 14:27:48,735 | INFO     | pilot state: finished 
[2025-11-21 09:28:43] 2025-11-21 14:27:48,735 | INFO     | transexitcode: 0
[2025-11-21 09:28:43] 2025-11-21 14:27:48,735 | INFO     | exeerrorcode: 0
[2025-11-21 09:28:43] 2025-11-21 14:27:48,735 | INFO     | exeerrordiag: 
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | exitcode: 0
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | exitmsg: OK
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | cpuconsumptiontime: 192270 s
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | nevents: 1000
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | neventsw: 0
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | pid: 3875413
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | pgrp: 3875413
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | corecount: 8
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | event service: False
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | sizes: {0: 2298808, 1: 2298808, 12: 2298836, 14: 2299126, 22: 2299154, 45401: 2345259, 45402: 2345386, 45406: 2354438, 45409: 2354494, 45427: 2354740}
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | --------------------------------------------------
[2025-11-21 09:28:43] 2025-11-21 14:27:48,736 | INFO     | 
[2025-11-21 09:28:43] 2025-11-21 14:27:48,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-11-21 09:28:43] 2025-11-21 14:27:48,777 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,777 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,777 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,777 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,777 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,777 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,777 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,777 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,777 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,778 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 09:28:43] 2025-11-21 14:27:48,779 | INFO     | job 6893842401 has completed (purged errors)
[2025-11-21 09:28:43] 2025-11-21 14:27:48,779 | INFO     | overall cleanup function is called
[2025-11-21 09:28:43] 2025-11-21 14:27:49,798 | INFO     | --- collectZombieJob: --- 10, [3875413]
[2025-11-21 09:28:43] 2025-11-21 14:27:49,798 | INFO     | zombie collector waiting for pid 3875413
[2025-11-21 09:28:43] 2025-11-21 14:27:49,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 09:28:43] 2025-11-21 14:27:49,798 | INFO     | collected zombie processes
[2025-11-21 09:28:43] 2025-11-21 14:27:49,798 | INFO     | will attempt to kill all subprocesses of pid=3875413
[2025-11-21 09:28:43] 2025-11-21 14:27:50,717 | INFO     | process IDs to be killed: [3875413] (in reverse order)
[2025-11-21 09:28:43] 2025-11-21 14:27:50,984 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 09:28:43] 2025-11-21 14:27:50,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 09:28:43] 2025-11-21 14:27:51,029 | INFO     | did not find any defunct processes belonging to 3875413
[2025-11-21 09:28:43] 2025-11-21 14:27:51,081 | INFO     | did not find any defunct processes belonging to 3875413
[2025-11-21 09:28:43] 2025-11-21 14:27:51,085 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 09:28:43] 2025-11-21 14:27:51,085 | INFO     | ready for new job
[2025-11-21 09:28:43] 2025-11-21 14:27:51,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 09:28:43] 2025-11-21 14:27:51,094 | INFO     | ***************************************
[2025-11-21 09:28:43] 2025-11-21 14:27:51,094 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 09:28:43] 2025-11-21 14:27:51,094 | INFO     | ***************************************
[2025-11-21 09:28:43] 2025-11-21 14:27:51,094 | INFO     | 
[2025-11-21 09:28:43] 2025-11-21 14:27:51,103 | INFO     | architecture information:
[2025-11-21 09:28:43] 2025-11-21 14:27:51,104 | INFO     | executing command: cat /etc/os-release
[2025-11-21 09:28:43] 2025-11-21 14:27:51,153 | INFO     | cat /etc/os-release:
[2025-11-21 09:28:43] NAME="CentOS Linux"
[2025-11-21 09:28:43] VERSION="7 (Core)"
[2025-11-21 09:28:43] ID="centos"
[2025-11-21 09:28:43] ID_LIKE="rhel fedora"
[2025-11-21 09:28:43] VERSION_ID="7"
[2025-11-21 09:28:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 09:28:43] ANSI_COLOR="0;31"
[2025-11-21 09:28:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 09:28:43] HOME_URL="https://www.centos.org/"
[2025-11-21 09:28:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 09:28:43] 
[2025-11-21 09:28:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 09:28:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 09:28:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 09:28:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 09:28:43] 
[2025-11-21 09:28:43] 2025-11-21 14:27:51,153 | INFO     | ***************************************
[2025-11-21 09:28:43] 2025-11-21 14:27:51,660 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-11-21 09:28:43] 2025-11-21 14:27:51,788 | INFO     | sufficient remaining disk space (66207088640 B)
[2025-11-21 09:28:43] 2025-11-21 14:27:51,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 09:28:43] 2025-11-21 14:27:51,788 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 09:28:43] 2025-11-21 14:27:51,789 | INFO     | update_server=False
[2025-11-21 09:28:43] 2025-11-21 14:27:51,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 09:28:43] 2025-11-21 14:27:51,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 09:28:43] 2025-11-21 14:27:51,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 09:28:43] 2025-11-21 14:27:52,300 | INFO     | all data control threads have been joined
[2025-11-21 09:28:43] 2025-11-21 14:27:52,416 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:28:43] 2025-11-21 14:27:52,416 | INFO     | aborting loop
[2025-11-21 09:28:43] 2025-11-21 14:27:52,731 | INFO     | all job control threads have been joined
[2025-11-21 09:28:43] 2025-11-21 14:27:52,794 | INFO     | [job] retrieve thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:52,907 | INFO     | [job] validate thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:52,976 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:53,225 | INFO     | [payload] failed_post thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:53,251 | INFO     | [data] copytool_in thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:53,301 | INFO     | all payload control threads have been joined
[2025-11-21 09:28:43] 2025-11-21 14:27:53,305 | INFO     | [data] control thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:53,419 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:53,422 | INFO     | [job] job monitor thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:53,688 | INFO     | [payload] validate_post thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:53,722 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:53,737 | INFO     | [job] control thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:53,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:28:43] 2025-11-21 14:27:53,797 | INFO     | [data] copytool_out thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:53,827 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:54,308 | INFO     | [payload] control thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:54,756 | INFO     | [job] queue monitor thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:27:55,799 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 09:28:43] 2025-11-21 14:28:20,910 | INFO     | [monitor] cgroup control has ended
[2025-11-21 09:28:43] 2025-11-21 14:28:21,599 | INFO     | PID=3850683 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 09:28:43] 2025-11-21 14:28:21,599 | INFO     | .. there are 39 such processes running
[2025-11-21 09:28:43] 2025-11-21 14:28:21,602 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 09:28:43] 2025-11-21 14:28:21,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 09:28:43] 2025-11-21 14:28:21,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 09:28:43] 2025-11-21 14:28:22,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140556327225152)>', '<ExcThread(monitor, started 140555984021248)>']
[2025-11-21 09:28:43] 2025-11-21 14:28:22,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 09:28:43] 2025-11-21 14:28:22,608 | INFO     | [monitor] control thread has ended
[2025-11-21 09:28:43] 2025-11-21 14:28:27,614 | INFO     | all workflow threads have been joined
[2025-11-21 09:28:43] 2025-11-21 14:28:27,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 09:28:43] 2025-11-21 14:28:27,616 | INFO     | traces error code: 0
[2025-11-21 09:28:43] 2025-11-21 14:28:27,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 09:28:43] 2025-11-21 14:28:27,746 [wrapper] ==== pilot stdout END ====
[2025-11-21 09:28:43] 2025-11-21 14:28:27,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 09:28:43] 2025-11-21 14:28:27,762 [wrapper] pilotpid: 3850683
[2025-11-21 09:28:43] 2025-11-21 14:28:27,772 [wrapper] Pilot exit status: 0
[2025-11-21 09:28:43] 2025-11-21 14:28:27,813 [wrapper] pandaids: 6893842401
[2025-11-21 09:28:43] 2025-11-21 14:28:27,973 [wrapper] cleanup supervisor_pilot 3542999 3850684
[2025-11-21 09:28:43] 2025-11-21 14:28:28,002 [wrapper] Test setup, not cleaning
[2025-11-21 09:28:43] 2025-11-21 14:28:28,015 [wrapper] apfmon messages muted
[2025-11-21 09:28:43] 2025-11-21 14:28:28,027 [wrapper] ==== wrapper stdout END ====
[2025-11-21 09:28:43] 2025-11-21 14:28:28,040 [wrapper] ==== wrapper stderr END ====
[2025-11-21 09:28:43]  *** Error codes and diagnostics ***
[2025-11-21 09:28:43]     "exeErrorCode": 0,
[2025-11-21 09:28:43]     "exeErrorDiag": "",
[2025-11-21 09:28:43]     "pilotErrorCode": 0,
[2025-11-21 09:28:43]     "pilotErrorDiag": "",
[2025-11-21 09:28:43]  *** Listing of results directory ***
[2025-11-21 09:28:43] total 1316704
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 09:28:43] -rwx------. 1 boincer umatlas     36292 Nov 20 05:17 runpilot2-wrapper.sh
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:17 queuedata.json
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas       100 Nov 20 20:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 09:28:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 20:49 run_atlas
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas       105 Nov 20 20:49 job.xml
[2025-11-21 09:28:43] -rw-r--r--. 2 boincer umatlas 406534406 Nov 20 20:49 EVNT.47493127._000187.pool.root.1
[2025-11-21 09:28:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 20:49 start_atlas.sh
[2025-11-21 09:28:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 20:49 shared
[2025-11-21 09:28:43] -rw-r--r--. 2 boincer umatlas    590102 Nov 20 20:49 input.tar.gz
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas         0 Nov 20 20:49 boinc_lockfile
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas      2786 Nov 20 20:49 pandaJob.out
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas        57 Nov 20 20:49 setup.sh.local
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas    989817 Nov 20 20:50 agis_schedconf.cvmfs.json
[2025-11-21 09:28:43] drwx------. 5 boincer umatlas      4096 Nov 20 20:50 pilot3
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas       533 Nov 21 09:19 boinc_task_state.xml
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas      6948 Nov 21 09:20 init_data.xml
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas 922072423 Nov 21 09:26 HITS.47523449._001865.pool.root.1
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas      1044 Nov 21 09:27 memory_monitor_summary.json
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas   1526164 Nov 21 09:27 agis_ddmendpoints.agis.ALL.json
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas   1955334 Nov 21 09:27 log.47523449._001865.job.log.tgz.1
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas      8581 Nov 21 09:27 heartbeat.json
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas        95 Nov 21 09:28 pilot_heartbeat.json
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas      4825 Nov 21 09:28 pilotlog.txt
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas   5928674 Nov 21 09:28 log.47523449._001865.job.log.1
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas       353 Nov 21 09:28 output.list
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas       620 Nov 21 09:28 runtime_log
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas   7905280 Nov 21 09:28 result.tar.gz
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas       659 Nov 21 09:28 QlhLDmhuGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvKGKDm4LJMIn.diag
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas      9356 Nov 21 09:28 runtime_log.err
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas        29 Nov 21 09:28 wrapper_checkpoint.txt
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 09:28 boinc_mmap_file
[2025-11-21 09:28:43] -rw-r--r--. 1 boincer umatlas     21170 Nov 21 09:28 stderr.txt
[2025-11-21 09:28:43] HITS file was successfully produced:
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas 922072423 Nov 21 09:26 shared/HITS.pool.root.1
[2025-11-21 09:28:43]  *** Contents of shared directory: ***
[2025-11-21 09:28:43] total 1305796
[2025-11-21 09:28:43] -rw-r--r--. 2 boincer umatlas 406534406 Nov 20 20:49 ATLAS.root_0
[2025-11-21 09:28:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 20:49 start_atlas.sh
[2025-11-21 09:28:43] -rw-r--r--. 2 boincer umatlas    590102 Nov 20 20:49 input.tar.gz
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas 922072423 Nov 21 09:26 HITS.pool.root.1
[2025-11-21 09:28:43] -rw-------. 1 boincer umatlas   7905280 Nov 21 09:28 result.tar.gz
09:28:45 (3837434): run_atlas exited; CPU time 193439.436455
09:28:45 (3837434): called boinc_finish(0)

</stderr_txt>
]]>

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