Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:25:46 (2706563): wrapper (7.7.26015): starting
19:25:46 (2706563): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 19:25:46] Arguments: --nthreads 4
[2025-11-23 19:25:46] Threads: 4
[2025-11-23 19:25:46] Checking for CVMFS
[2025-11-23 19:25:46] No cvmfs_config command found, will try listing directly
[2025-11-23 19:25:46] CVMFS is ok
[2025-11-23 19:25:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 19:25:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 19:25:46] Further information can be found at the LHC@home message board.
[2025-11-23 19:25:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 19:25:46] Checking for apptainer binary...
[2025-11-23 19:25:46] which: no apptainer in ((null))
[2025-11-23 19:25:46] apptainer is not installed, using version from CVMFS
[2025-11-23 19:25:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 19:25:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-11-23 19:25:46] apptainer works
[2025-11-23 19:25:46] Set ATHENA_PROC_NUMBER=4
[2025-11-23 19:25:46] Set ATHENA_CORE_NUMBER=4
[2025-11-23 19:25:46] Starting ATLAS job with PandaID=6893853428
[2025-11-23 19:25:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 11:23:55]  *** The last 200 lines of the pilot log: ***
[2025-11-24 11:23:55] 2025-11-24 10:22:49,198 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2686.7022500000003
[2025-11-24 11:23:55] 2025-11-24 10:22:49,228 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6893853428/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 11:23:55] 2025-11-24 10:22:49,229 | INFO     | extracted standard info from prmon json
[2025-11-24 11:23:55] 2025-11-24 10:22:49,229 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 11:23:55] 2025-11-24 10:22:49,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 11:23:55] 2025-11-24 10:22:49,244 | INFO     | fitting pss+swap vs Time
[2025-11-24 11:23:55] 2025-11-24 10:22:49,246 | INFO     | sum of square deviations: 258372964207.9829
[2025-11-24 11:23:55] 2025-11-24 10:22:49,265 | INFO     | sum of deviations: 550001332664.7506
[2025-11-24 11:23:55] 2025-11-24 10:22:49,265 | INFO     | mean x: 1763951065.0042508
[2025-11-24 11:23:55] 2025-11-24 10:22:49,265 | INFO     | mean y: 2269870.3124335813
[2025-11-24 11:23:55] 2025-11-24 10:22:49,265 | INFO     | intersect: -3752671903.4204416
[2025-11-24 11:23:55] 2025-11-24 10:22:49,266 | INFO     | chi2: 4.6915835562890695
[2025-11-24 11:23:55] 2025-11-24 10:22:49,267 | INFO     | sum of square deviations: 254276218847.98364
[2025-11-24 11:23:55] 2025-11-24 10:22:49,286 | INFO     | sum of deviations: 761200251768.5305
[2025-11-24 11:23:55] 2025-11-24 10:22:49,287 | INFO     | mean x: 1763950912.5042734
[2025-11-24 11:23:55] 2025-11-24 10:22:49,287 | INFO     | mean y: 2277726.2425213675
[2025-11-24 11:23:55] 2025-11-24 10:22:49,287 | INFO     | intersect: -5278278531.786126
[2025-11-24 11:23:55] 2025-11-24 10:22:49,288 | INFO     | chi2: 2.2112040916216946
[2025-11-24 11:23:55] 2025-11-24 10:22:49,288 | INFO     | current chi2=2.2112040916216946 (change=52.86870488200994 %)
[2025-11-24 11:23:55] 2025-11-24 10:22:49,289 | INFO     | sum of square deviations: 250223009187.9827
[2025-11-24 11:23:55] 2025-11-24 10:22:49,308 | INFO     | sum of deviations: 832573606183.3446
[2025-11-24 11:23:55] 2025-11-24 10:22:49,308 | INFO     | mean x: 1763950760.0042965
[2025-11-24 11:23:55] 2025-11-24 10:22:49,309 | INFO     | mean y: 2280411.663802363
[2025-11-24 11:23:55] 2025-11-24 10:22:49,309 | INFO     | intersect: -5866959392.271707
[2025-11-24 11:23:55] 2025-11-24 10:22:49,310 | INFO     | chi2: 1.9069406545144356
[2025-11-24 11:23:55] 2025-11-24 10:22:49,310 | INFO     | current chi2=1.9069406545144356 (change=13.760079327825073 %)
[2025-11-24 11:23:55] 2025-11-24 10:22:49,310 | INFO     | right removable region: 930
[2025-11-24 11:23:55] 2025-11-24 10:22:49,311 | INFO     | sum of square deviations: 254276216407.98367
[2025-11-24 11:23:55] 2025-11-24 10:22:49,330 | INFO     | sum of deviations: 385314694244.1201
[2025-11-24 11:23:55] 2025-11-24 10:22:49,330 | INFO     | mean x: 1763951217.5042734
[2025-11-24 11:23:55] 2025-11-24 10:22:49,330 | INFO     | mean y: 2275988.84508547
[2025-11-24 11:23:55] 2025-11-24 10:22:49,330 | INFO     | intersect: -2670708270.6959977
[2025-11-24 11:23:55] 2025-11-24 10:22:49,331 | INFO     | chi2: 2.913007753195031
[2025-11-24 11:23:55] 2025-11-24 10:22:49,331 | INFO     | current chi2=2.913007753195031 (change=37.909924906055586 %)
[2025-11-24 11:23:55] 2025-11-24 10:22:49,332 | INFO     | sum of square deviations: 250223004307.9827
[2025-11-24 11:23:55] 2025-11-24 10:22:49,351 | INFO     | sum of deviations: 375360506781.4682
[2025-11-24 11:23:55] 2025-11-24 10:22:49,351 | INFO     | mean x: 1763951370.0042965
[2025-11-24 11:23:55] 2025-11-24 10:22:49,351 | INFO     | mean y: 2276362.8829215895
[2025-11-24 11:23:55] 2025-11-24 10:22:49,351 | INFO     | intersect: -2643833981.822722
[2025-11-24 11:23:55] 2025-11-24 10:22:49,352 | INFO     | chi2: 2.9120638887713652
[2025-11-24 11:23:55] 2025-11-24 10:22:49,352 | INFO     | current chi2=2.9120638887713652 (change=0.0324017134053506 %)
[2025-11-24 11:23:55] 2025-11-24 10:22:49,352 | INFO     | left removable region: 20
[2025-11-24 11:23:55] 2025-11-24 10:22:49,353 | INFO     | sum of square deviations: 233669680229.48257
[2025-11-24 11:23:55] 2025-11-24 10:22:49,371 | INFO     | sum of deviations: 657324034420.7296
[2025-11-24 11:23:55] 2025-11-24 10:22:49,371 | INFO     | mean x: 1763951339.5043957
[2025-11-24 11:23:55] 2025-11-24 10:22:49,372 | INFO     | mean y: 2287264.8175824177
[2025-11-24 11:23:55] 2025-11-24 10:22:49,372 | INFO     | intersect: -4959792581.6826935
[2025-11-24 11:23:55] 2025-11-24 10:22:49,373 | INFO     | chi2: 0.09700738564495617
[2025-11-24 11:23:55] 2025-11-24 10:22:49,373 | INFO     | current memory leak: 2.81 B/s (using 910 data points, chi2=0.10)
[2025-11-24 11:23:55] 2025-11-24 10:22:49,374 | INFO     | could have reported an average CPU frequency of 2677 MHz (35 samples)
[2025-11-24 11:23:55] 2025-11-24 10:22:49,374 | INFO     | ..............................
[2025-11-24 11:23:55] 2025-11-24 10:22:49,374 | INFO     | . Timing measurements:
[2025-11-24 11:23:55] 2025-11-24 10:22:49,374 | INFO     | . get job = 0 s
[2025-11-24 11:23:55] 2025-11-24 10:22:49,374 | INFO     | . initial setup = 1 s
[2025-11-24 11:23:55] 2025-11-24 10:22:49,374 | INFO     | . payload setup = 9 s
[2025-11-24 11:23:55] 2025-11-24 10:22:49,374 | INFO     | . stage-in = 0 s
[2025-11-24 11:23:55] 2025-11-24 10:22:49,375 | INFO     | . payload execution = 57364 s
[2025-11-24 11:23:55] 2025-11-24 10:22:49,375 | INFO     | . stage-out = 2 s
[2025-11-24 11:23:55] 2025-11-24 10:22:49,375 | INFO     | . log creation = 0 s
[2025-11-24 11:23:55] 2025-11-24 10:22:49,375 | INFO     | ..............................
[2025-11-24 11:23:55] 2025-11-24 10:22:49,504 | INFO     | 
[2025-11-24 11:23:55] 2025-11-24 10:22:49,504 | INFO     | job summary report
[2025-11-24 11:23:55] 2025-11-24 10:22:49,504 | INFO     | --------------------------------------------------
[2025-11-24 11:23:55] 2025-11-24 10:22:49,504 | INFO     | PanDA job id: 6893853428
[2025-11-24 11:23:55] 2025-11-24 10:22:49,504 | INFO     | task id: 47523449
[2025-11-24 11:23:55] 2025-11-24 10:22:49,504 | INFO     | errors: (none)
[2025-11-24 11:23:55] 2025-11-24 10:22:49,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 11:23:55] 2025-11-24 10:22:49,505 | INFO     | pilot state: finished 
[2025-11-24 11:23:55] 2025-11-24 10:22:49,505 | INFO     | transexitcode: 0
[2025-11-24 11:23:55] 2025-11-24 10:22:49,505 | INFO     | exeerrorcode: 0
[2025-11-24 11:23:55] 2025-11-24 10:22:49,505 | INFO     | exeerrordiag: 
[2025-11-24 11:23:55] 2025-11-24 10:22:49,505 | INFO     | exitcode: 0
[2025-11-24 11:23:55] 2025-11-24 10:22:49,505 | INFO     | exitmsg: OK
[2025-11-24 11:23:55] 2025-11-24 10:22:49,505 | INFO     | cpuconsumptiontime: 225905 s
[2025-11-24 11:23:55] 2025-11-24 10:22:49,505 | INFO     | nevents: 1000
[2025-11-24 11:23:55] 2025-11-24 10:22:49,505 | INFO     | neventsw: 0
[2025-11-24 11:23:55] 2025-11-24 10:22:49,505 | INFO     | pid: 2717979
[2025-11-24 11:23:55] 2025-11-24 10:22:49,506 | INFO     | pgrp: 2717979
[2025-11-24 11:23:55] 2025-11-24 10:22:49,506 | INFO     | corecount: 4
[2025-11-24 11:23:55] 2025-11-24 10:22:49,506 | INFO     | event service: False
[2025-11-24 11:23:55] 2025-11-24 10:22:49,506 | INFO     | sizes: {0: 2298597, 1: 2298796, 7: 2299058, 11: 2299086, 57376: 2353431, 57377: 2353430, 57380: 2362632, 57383: 2362688, 57391: 2362934}
[2025-11-24 11:23:55] 2025-11-24 10:22:49,506 | INFO     | --------------------------------------------------
[2025-11-24 11:23:55] 2025-11-24 10:22:49,506 | INFO     | 
[2025-11-24 11:23:55] 2025-11-24 10:22:49,506 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-11-24 11:23:55] 2025-11-24 10:22:49,537 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,538 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,538 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,538 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,538 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,539 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 11:23:55] 2025-11-24 10:22:49,540 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,540 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 11:23:55] 2025-11-24 10:22:49,540 | INFO     | job 6893853428 has completed (purged errors)
[2025-11-24 11:23:55] 2025-11-24 10:22:49,540 | INFO     | overall cleanup function is called
[2025-11-24 11:23:55] 2025-11-24 10:22:49,638 | INFO     | PID=2710535 has CPU usage=22.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 11:23:55] 2025-11-24 10:22:49,638 | INFO     | .. there are 9 such processes running
[2025-11-24 11:23:55] 2025-11-24 10:22:50,565 | INFO     | --- collectZombieJob: --- 10, [2717979]
[2025-11-24 11:23:55] 2025-11-24 10:22:50,566 | INFO     | zombie collector waiting for pid 2717979
[2025-11-24 11:23:55] 2025-11-24 10:22:50,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 11:23:55] 2025-11-24 10:22:50,566 | INFO     | collected zombie processes
[2025-11-24 11:23:55] 2025-11-24 10:22:50,566 | INFO     | will attempt to kill all subprocesses of pid=2717979
[2025-11-24 11:23:55] 2025-11-24 10:22:51,406 | INFO     | process IDs to be killed: [2717979] (in reverse order)
[2025-11-24 11:23:55] 2025-11-24 10:22:51,683 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 11:23:55] 2025-11-24 10:22:51,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 11:23:55] 2025-11-24 10:22:51,718 | INFO     | did not find any defunct processes belonging to 2717979
[2025-11-24 11:23:55] 2025-11-24 10:22:51,749 | INFO     | did not find any defunct processes belonging to 2717979
[2025-11-24 11:23:55] 2025-11-24 10:22:51,750 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 11:23:55] 2025-11-24 10:22:51,751 | INFO     | ready for new job
[2025-11-24 11:23:55] 2025-11-24 10:22:51,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 11:23:55] 2025-11-24 10:22:51,757 | INFO     | ***************************************
[2025-11-24 11:23:55] 2025-11-24 10:22:51,758 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 11:23:55] 2025-11-24 10:22:51,758 | INFO     | ***************************************
[2025-11-24 11:23:55] 2025-11-24 10:22:51,758 | INFO     | 
[2025-11-24 11:23:55] 2025-11-24 10:22:51,767 | INFO     | architecture information:
[2025-11-24 11:23:55] 2025-11-24 10:22:51,768 | INFO     | executing command: cat /etc/os-release
[2025-11-24 11:23:55] 2025-11-24 10:22:51,788 | INFO     | cat /etc/os-release:
[2025-11-24 11:23:55] NAME="CentOS Linux"
[2025-11-24 11:23:55] VERSION="7 (Core)"
[2025-11-24 11:23:55] ID="centos"
[2025-11-24 11:23:55] ID_LIKE="rhel fedora"
[2025-11-24 11:23:55] VERSION_ID="7"
[2025-11-24 11:23:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 11:23:55] ANSI_COLOR="0;31"
[2025-11-24 11:23:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 11:23:55] HOME_URL="https://www.centos.org/"
[2025-11-24 11:23:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 11:23:55] 
[2025-11-24 11:23:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 11:23:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 11:23:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 11:23:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 11:23:55] 
[2025-11-24 11:23:55] 2025-11-24 10:22:51,788 | INFO     | ***************************************
[2025-11-24 11:23:55] 2025-11-24 10:22:52,291 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-11-24 11:23:55] 2025-11-24 10:22:52,316 | INFO     | sufficient remaining disk space (3299917955072 B)
[2025-11-24 11:23:55] 2025-11-24 10:22:52,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 11:23:55] 2025-11-24 10:22:52,317 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 11:23:55] 2025-11-24 10:22:52,317 | INFO     | update_server=False
[2025-11-24 11:23:55] 2025-11-24 10:22:52,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 11:23:55] 2025-11-24 10:22:52,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 11:23:55] 2025-11-24 10:22:52,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 11:23:55] 2025-11-24 10:22:52,369 | INFO     | all data control threads have been joined
[2025-11-24 11:23:55] 2025-11-24 10:22:52,771 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 11:23:55] 2025-11-24 10:22:52,772 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 11:23:55] 2025-11-24 10:22:52,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:23:55] 2025-11-24 10:22:52,772 | INFO     | will abort loop
[2025-11-24 11:23:55] 2025-11-24 10:22:53,047 | INFO     | all job control threads have been joined
[2025-11-24 11:23:55] 2025-11-24 10:22:53,142 | INFO     | all payload control threads have been joined
[2025-11-24 11:23:55] 2025-11-24 10:22:53,323 | INFO     | [job] retrieve thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:53,374 | INFO     | [data] control thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:53,572 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:53,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:53,777 | INFO     | [job] job monitor thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:53,851 | INFO     | [job] validate thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:53,933 | INFO     | [data] copytool_in thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:54,053 | INFO     | [job] control thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:54,149 | INFO     | [payload] control thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:54,209 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:54,253 | INFO     | [payload] validate_post thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:54,319 | INFO     | [data] copytool_out thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:54,361 | INFO     | [payload] failed_post thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:54,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:23:55] 2025-11-24 10:22:54,716 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:55,517 | INFO     | [job] queue monitor thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:22:56,325 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 11:23:55] 2025-11-24 10:23:22,765 | INFO     | PID=2710535 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 11:23:55] 2025-11-24 10:23:22,765 | INFO     | .. there are 9 such processes running
[2025-11-24 11:23:55] 2025-11-24 10:23:22,766 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 11:23:55] 2025-11-24 10:23:22,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 11:23:55] 2025-11-24 10:23:22,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 11:23:55] 2025-11-24 10:23:34,427 | INFO     | [monitor] cgroup control has ended
[2025-11-24 11:23:55] 2025-11-24 10:23:36,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22770245904192)>', '<ExcThread(monitor, started 22770008164096)>']
[2025-11-24 11:23:55] 2025-11-24 10:23:36,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 11:23:55] 2025-11-24 10:23:36,836 | INFO     | [monitor] control thread has ended
[2025-11-24 11:23:55] 2025-11-24 10:23:41,373 | INFO     | all workflow threads have been joined
[2025-11-24 11:23:55] 2025-11-24 10:23:41,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 11:23:55] 2025-11-24 10:23:41,374 | INFO     | traces error code: 0
[2025-11-24 11:23:55] 2025-11-24 10:23:41,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 11:23:55] 2025-11-24 10:23:41,535 [wrapper] ==== pilot stdout END ====
[2025-11-24 11:23:55] 2025-11-24 10:23:41,539 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 11:23:55] 2025-11-24 10:23:41,543 [wrapper] pilotpid: 2710535
[2025-11-24 11:23:55] 2025-11-24 10:23:41,548 [wrapper] Pilot exit status: 0
[2025-11-24 11:23:55] 2025-11-24 10:23:41,564 [wrapper] pandaids: 6893853428
[2025-11-24 11:23:55] 2025-11-24 10:23:41,761 [wrapper] cleanup supervisor_pilot   65034 2710536
[2025-11-24 11:23:55] 2025-11-24 10:23:41,765 [wrapper] Test setup, not cleaning
[2025-11-24 11:23:55] 2025-11-24 10:23:41,769 [wrapper] apfmon messages muted
[2025-11-24 11:23:55] 2025-11-24 10:23:41,773 [wrapper] ==== wrapper stdout END ====
[2025-11-24 11:23:55] 2025-11-24 10:23:41,776 [wrapper] ==== wrapper stderr END ====
[2025-11-24 11:23:55]  *** Error codes and diagnostics ***
[2025-11-24 11:23:55]     "exeErrorCode": 0,
[2025-11-24 11:23:55]     "exeErrorDiag": "",
[2025-11-24 11:23:55]     "pilotErrorCode": 0,
[2025-11-24 11:23:55]     "pilotErrorDiag": "",
[2025-11-24 11:23:55]  *** Listing of results directory ***
[2025-11-24 11:23:55] total 1318132
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:21 queuedata.json
[2025-11-24 11:23:55] -rwx------ 1 boinc boinc     36292 Nov 20 13:21 runpilot2-wrapper.sh
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc       100 Nov 23 19:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 11:23:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 19:25 run_atlas
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc       105 Nov 23 19:25 job.xml
[2025-11-24 11:23:55] -rw-r--r-- 2 boinc boinc 409602656 Nov 23 19:25 EVNT.47493127._000414.pool.root.1
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc      6687 Nov 23 19:25 init_data.xml
[2025-11-24 11:23:55] -rw-r--r-- 2 boinc boinc     15847 Nov 23 19:25 start_atlas.sh
[2025-11-24 11:23:55] drwxrwx--x 2 boinc boinc      4096 Nov 23 19:25 shared
[2025-11-24 11:23:55] -rw-r--r-- 2 boinc boinc    590098 Nov 23 19:25 input.tar.gz
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc         0 Nov 23 19:25 boinc_lockfile
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc      2785 Nov 23 19:25 pandaJob.out
[2025-11-24 11:23:55] -rw------- 1 boinc boinc    989786 Nov 23 19:25 agis_schedconf.cvmfs.json
[2025-11-24 11:23:55] drwx------ 5 boinc boinc      4096 Nov 23 19:26 pilot3
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc       532 Nov 24 11:10 boinc_task_state.xml
[2025-11-24 11:23:55] -rw------- 1 boinc boinc 917029429 Nov 24 11:21 HITS.47523449._004132.pool.root.1
[2025-11-24 11:23:55] -rw------- 1 boinc boinc      1038 Nov 24 11:22 memory_monitor_summary.json
[2025-11-24 11:23:55] -rw------- 1 boinc boinc   1526164 Nov 24 11:22 agis_ddmendpoints.agis.ALL.json
[2025-11-24 11:23:55] -rw------- 1 boinc boinc   1686630 Nov 24 11:22 log.47523449._004132.job.log.tgz.1
[2025-11-24 11:23:55] -rw------- 1 boinc boinc        95 Nov 24 11:22 pilot_heartbeat.json
[2025-11-24 11:23:55] -rw------- 1 boinc boinc      8591 Nov 24 11:22 heartbeat.json
[2025-11-24 11:23:55] -rw------- 1 boinc boinc      5021 Nov 24 11:23 pilotlog.txt
[2025-11-24 11:23:55] -rw------- 1 boinc boinc   7920732 Nov 24 11:23 log.47523449._004132.job.log.1
[2025-11-24 11:23:55] -rw------- 1 boinc boinc       353 Nov 24 11:23 output.list
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc       620 Nov 24 11:23 runtime_log
[2025-11-24 11:23:55] -rw------- 1 boinc boinc   9625600 Nov 24 11:23 result.tar.gz
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc      9223 Nov 24 11:23 runtime_log.err
[2025-11-24 11:23:55] -rw------- 1 boinc boinc       670 Nov 24 11:23 9JeMDmUqIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9kHKDmvTLpem.diag
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc        28 Nov 24 11:23 wrapper_checkpoint.txt
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc      8192 Nov 24 11:23 boinc_mmap_file
[2025-11-24 11:23:55] -rw-r--r-- 1 boinc boinc     21226 Nov 24 11:23 stderr.txt
[2025-11-24 11:23:55] HITS file was successfully produced:
[2025-11-24 11:23:55] -rw------- 1 boinc boinc 917029429 Nov 24 11:21 shared/HITS.pool.root.1
[2025-11-24 11:23:55]  *** Contents of shared directory: ***
[2025-11-24 11:23:55] total 1305548
[2025-11-24 11:23:55] -rw-r--r-- 2 boinc boinc 409602656 Nov 23 19:25 ATLAS.root_0
[2025-11-24 11:23:55] -rw-r--r-- 2 boinc boinc     15847 Nov 23 19:25 start_atlas.sh
[2025-11-24 11:23:55] -rw-r--r-- 2 boinc boinc    590098 Nov 23 19:25 input.tar.gz
[2025-11-24 11:23:55] -rw------- 1 boinc boinc 917029429 Nov 24 11:21 HITS.pool.root.1
[2025-11-24 11:23:55] -rw------- 1 boinc boinc   9625600 Nov 24 11:23 result.tar.gz
11:23:56 (2706563): run_atlas exited; CPU time 228765.916709
11:23:56 (2706563): called boinc_finish(0)

</stderr_txt>
]]>

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