Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:03:51 (2672990): wrapper (7.7.26015): starting
21:03:51 (2672990): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 21:03:51] Arguments: --nthreads 8
[2025-11-20 21:03:51] Threads: 8
[2025-11-20 21:03:51] Checking for CVMFS
[2025-11-20 21:03:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 21:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 21:03:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 21:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 21:03:52] 2.13.2.0 7688 25086 173672 153103 2 173 21929461 39288833 7127 16776704 0 13714023 99.649 10112087 30422 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 21:03:52] CVMFS is ok
[2025-11-20 21:03:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 21:03:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 21:03:52] Further information can be found at the LHC@home message board.
[2025-11-20 21:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 21:03:52] Checking for apptainer binary...
[2025-11-20 21:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 21:03:52] Running /usr/bin/apptainer --version
[2025-11-20 21:03:52] apptainer version 1.4.4-1.el9
[2025-11-20 21:03:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 21:03:52] c-210-1.aglt2.org
[2025-11-20 21:03:52] apptainer works
[2025-11-20 21:03:52] Set ATHENA_PROC_NUMBER=8
[2025-11-20 21:03:52] Set ATHENA_CORE_NUMBER=8
[2025-11-20 21:03:52] Starting ATLAS job with PandaID=6893846229
[2025-11-20 21:03:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 09:34:30]  *** The last 200 lines of the pilot log: ***
[2025-11-21 09:34:30] 2025-11-21 14:33:40,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 09:34:30] 2025-11-21 14:33:41,208 | INFO     | time since job start (44972s) is within the limit (172800.0s)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,430 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 09:34:30] 2025-11-21 14:33:42,437 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2619.856375000001
[2025-11-21 09:34:30] 2025-11-21 14:33:42,443 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6893846229/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,444 | INFO     | extracted standard info from prmon json
[2025-11-21 09:34:30] 2025-11-21 14:33:42,444 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 09:34:30] 2025-11-21 14:33:42,444 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 09:34:30] 2025-11-21 14:33:42,458 | INFO     | fitting pss+swap vs Time
[2025-11-21 09:34:30] 2025-11-21 14:33:42,460 | INFO     | sum of square deviations: 124124773079.26482
[2025-11-21 09:34:30] 2025-11-21 14:33:42,473 | INFO     | sum of deviations: 931690892114.6753
[2025-11-21 09:34:30] 2025-11-21 14:33:42,474 | INFO     | mean x: 1763713130.8738127
[2025-11-21 09:34:30] 2025-11-21 14:33:42,474 | INFO     | mean y: 2865426.7706919946
[2025-11-21 09:34:30] 2025-11-21 14:33:42,474 | INFO     | intersect: -13235712333.116419
[2025-11-21 09:34:30] 2025-11-21 14:33:42,475 | INFO     | chi2: 6.211721300606236
[2025-11-21 09:34:30] 2025-11-21 14:33:42,476 | INFO     | sum of square deviations: 121615657330.4207
[2025-11-21 09:34:30] 2025-11-21 14:33:42,490 | INFO     | sum of deviations: 1155971814247.4568
[2025-11-21 09:34:30] 2025-11-21 14:33:42,490 | INFO     | mean x: 1763712978.3797815
[2025-11-21 09:34:30] 2025-11-21 14:33:42,491 | INFO     | mean y: 2879045.9767759563
[2025-11-21 09:34:30] 2025-11-21 14:33:42,491 | INFO     | intersect: -16761430222.937397
[2025-11-21 09:34:30] 2025-11-21 14:33:42,492 | INFO     | chi2: 3.4604350661538597
[2025-11-21 09:34:30] 2025-11-21 14:33:42,492 | INFO     | current chi2=3.4604350661538597 (change=44.291849252539116 %)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,493 | INFO     | sum of square deviations: 119140588731.524
[2025-11-21 09:34:30] 2025-11-21 14:33:42,507 | INFO     | sum of deviations: 1260720333686.2288
[2025-11-21 09:34:30] 2025-11-21 14:33:42,507 | INFO     | mean x: 1763712825.885832
[2025-11-21 09:34:30] 2025-11-21 14:33:42,507 | INFO     | mean y: 2885494.0027510314
[2025-11-21 09:34:30] 2025-11-21 14:33:42,507 | INFO     | intersect: -18660347968.676353
[2025-11-21 09:34:30] 2025-11-21 14:33:42,508 | INFO     | chi2: 2.7373309679321842
[2025-11-21 09:34:30] 2025-11-21 14:33:42,508 | INFO     | current chi2=2.7373309679321842 (change=20.896334836456788 %)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,508 | INFO     | right removable region: 726
[2025-11-21 09:34:30] 2025-11-21 14:33:42,509 | INFO     | sum of square deviations: 121615309204.1791
[2025-11-21 09:34:30] 2025-11-21 14:33:42,524 | INFO     | sum of deviations: 715551630302.6047
[2025-11-21 09:34:30] 2025-11-21 14:33:42,524 | INFO     | mean x: 1763713283.3784153
[2025-11-21 09:34:30] 2025-11-21 14:33:42,524 | INFO     | mean y: 2878541.6079234974
[2025-11-21 09:34:30] 2025-11-21 14:33:42,524 | INFO     | intersect: -10374334027.814362
[2025-11-21 09:34:30] 2025-11-21 14:33:42,525 | INFO     | chi2: 3.6733867584108157
[2025-11-21 09:34:30] 2025-11-21 14:33:42,526 | INFO     | current chi2=3.6733867584108157 (change=40.86362570625457 %)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,527 | INFO     | sum of square deviations: 119140160143.60947
[2025-11-21 09:34:30] 2025-11-21 14:33:42,541 | INFO     | sum of deviations: 660759140834.6134
[2025-11-21 09:34:30] 2025-11-21 14:33:42,541 | INFO     | mean x: 1763713435.874828
[2025-11-21 09:34:30] 2025-11-21 14:33:42,541 | INFO     | mean y: 2881915.90784044
[2025-11-21 09:34:30] 2025-11-21 14:33:42,541 | INFO     | intersect: -9778788455.88262
[2025-11-21 09:34:30] 2025-11-21 14:33:42,542 | INFO     | chi2: 3.5956592727220356
[2025-11-21 09:34:30] 2025-11-21 14:33:42,542 | INFO     | current chi2=3.5956592727220356 (change=2.1159624836892132 %)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,542 | INFO     | left removable region: 20
[2025-11-21 09:34:30] 2025-11-21 14:33:42,543 | INFO     | sum of square deviations: 109111287698.26662
[2025-11-21 09:34:30] 2025-11-21 14:33:42,557 | INFO     | sum of deviations: 910264655083.9202
[2025-11-21 09:34:30] 2025-11-21 14:33:42,557 | INFO     | mean x: 1763713405.3796034
[2025-11-21 09:34:30] 2025-11-21 14:33:42,557 | INFO     | mean y: 2907573.216713881
[2025-11-21 09:34:30] 2025-11-21 14:33:42,557 | INFO     | intersect: -14710931924.804861
[2025-11-21 09:34:30] 2025-11-21 14:33:42,558 | INFO     | chi2: 0.04653552250457049
[2025-11-21 09:34:30] 2025-11-21 14:33:42,558 | INFO     | current memory leak: 8.34 B/s (using 706 data points, chi2=0.05)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,559 | INFO     | could have reported an average CPU frequency of 2600 MHz (28 samples)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,559 | INFO     | ..............................
[2025-11-21 09:34:30] 2025-11-21 14:33:42,559 | INFO     | . Timing measurements:
[2025-11-21 09:34:30] 2025-11-21 14:33:42,560 | INFO     | . get job = 0 s
[2025-11-21 09:34:30] 2025-11-21 14:33:42,560 | INFO     | . initial setup = 3 s
[2025-11-21 09:34:30] 2025-11-21 14:33:42,560 | INFO     | . payload setup = 9 s
[2025-11-21 09:34:30] 2025-11-21 14:33:42,560 | INFO     | . stage-in = 0 s
[2025-11-21 09:34:30] 2025-11-21 14:33:42,560 | INFO     | . payload execution = 44936 s
[2025-11-21 09:34:30] 2025-11-21 14:33:42,560 | INFO     | . stage-out = 3 s
[2025-11-21 09:34:30] 2025-11-21 14:33:42,560 | INFO     | . log creation = 0 s
[2025-11-21 09:34:30] 2025-11-21 14:33:42,560 | INFO     | ..............................
[2025-11-21 09:34:30] 2025-11-21 14:33:42,666 | INFO     | 
[2025-11-21 09:34:30] 2025-11-21 14:33:42,666 | INFO     | job summary report
[2025-11-21 09:34:30] 2025-11-21 14:33:42,666 | INFO     | --------------------------------------------------
[2025-11-21 09:34:30] 2025-11-21 14:33:42,666 | INFO     | PanDA job id: 6893846229
[2025-11-21 09:34:30] 2025-11-21 14:33:42,667 | INFO     | task id: 47523449
[2025-11-21 09:34:30] 2025-11-21 14:33:42,667 | INFO     | errors: (none)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 09:34:30] 2025-11-21 14:33:42,667 | INFO     | pilot state: finished 
[2025-11-21 09:34:30] 2025-11-21 14:33:42,667 | INFO     | transexitcode: 0
[2025-11-21 09:34:30] 2025-11-21 14:33:42,667 | INFO     | exeerrorcode: 0
[2025-11-21 09:34:30] 2025-11-21 14:33:42,667 | INFO     | exeerrordiag: 
[2025-11-21 09:34:30] 2025-11-21 14:33:42,667 | INFO     | exitcode: 0
[2025-11-21 09:34:30] 2025-11-21 14:33:42,667 | INFO     | exitmsg: OK
[2025-11-21 09:34:30] 2025-11-21 14:33:42,668 | INFO     | cpuconsumptiontime: 291801 s
[2025-11-21 09:34:30] 2025-11-21 14:33:42,668 | INFO     | nevents: 1000
[2025-11-21 09:34:30] 2025-11-21 14:33:42,668 | INFO     | neventsw: 0
[2025-11-21 09:34:30] 2025-11-21 14:33:42,668 | INFO     | pid: 2683107
[2025-11-21 09:34:30] 2025-11-21 14:33:42,668 | INFO     | pgrp: 2683107
[2025-11-21 09:34:30] 2025-11-21 14:33:42,668 | INFO     | corecount: 8
[2025-11-21 09:34:30] 2025-11-21 14:33:42,668 | INFO     | event service: False
[2025-11-21 09:34:30] 2025-11-21 14:33:42,668 | INFO     | sizes: {0: 2298807, 1: 2298807, 6: 2299097, 11: 2299125, 44949: 2345126, 44953: 2354304, 44956: 2354494}
[2025-11-21 09:34:30] 2025-11-21 14:33:42,668 | INFO     | --------------------------------------------------
[2025-11-21 09:34:30] 2025-11-21 14:33:42,669 | INFO     | 
[2025-11-21 09:34:30] 2025-11-21 14:33:42,669 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-21 09:34:30] 2025-11-21 14:33:42,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 09:34:30] 2025-11-21 14:33:42,688 | INFO     | job 6893846229 has completed (purged errors)
[2025-11-21 09:34:30] 2025-11-21 14:33:42,688 | INFO     | overall cleanup function is called
[2025-11-21 09:34:30] 2025-11-21 14:33:43,700 | INFO     | --- collectZombieJob: --- 10, [2683107]
[2025-11-21 09:34:30] 2025-11-21 14:33:43,701 | INFO     | zombie collector waiting for pid 2683107
[2025-11-21 09:34:30] 2025-11-21 14:33:43,701 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 09:34:30] 2025-11-21 14:33:43,701 | INFO     | collected zombie processes
[2025-11-21 09:34:30] 2025-11-21 14:33:43,701 | INFO     | will attempt to kill all subprocesses of pid=2683107
[2025-11-21 09:34:30] 2025-11-21 14:33:43,936 | INFO     | process IDs to be killed: [2683107] (in reverse order)
[2025-11-21 09:34:30] 2025-11-21 14:33:44,001 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 09:34:30] 2025-11-21 14:33:44,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 09:34:30] 2025-11-21 14:33:44,009 | INFO     | did not find any defunct processes belonging to 2683107
[2025-11-21 09:34:30] 2025-11-21 14:33:44,014 | INFO     | did not find any defunct processes belonging to 2683107
[2025-11-21 09:34:30] 2025-11-21 14:33:44,016 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 09:34:30] 2025-11-21 14:33:44,016 | INFO     | ready for new job
[2025-11-21 09:34:30] 2025-11-21 14:33:44,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 09:34:30] 2025-11-21 14:33:44,020 | INFO     | ***************************************
[2025-11-21 09:34:30] 2025-11-21 14:33:44,020 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 09:34:30] 2025-11-21 14:33:44,020 | INFO     | ***************************************
[2025-11-21 09:34:30] 2025-11-21 14:33:44,021 | INFO     | 
[2025-11-21 09:34:30] 2025-11-21 14:33:44,022 | INFO     | architecture information:
[2025-11-21 09:34:30] 2025-11-21 14:33:44,023 | INFO     | executing command: cat /etc/os-release
[2025-11-21 09:34:30] 2025-11-21 14:33:44,035 | INFO     | cat /etc/os-release:
[2025-11-21 09:34:30] NAME="CentOS Linux"
[2025-11-21 09:34:30] VERSION="7 (Core)"
[2025-11-21 09:34:30] ID="centos"
[2025-11-21 09:34:30] ID_LIKE="rhel fedora"
[2025-11-21 09:34:30] VERSION_ID="7"
[2025-11-21 09:34:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 09:34:30] ANSI_COLOR="0;31"
[2025-11-21 09:34:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 09:34:30] HOME_URL="https://www.centos.org/"
[2025-11-21 09:34:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 09:34:30] 
[2025-11-21 09:34:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 09:34:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 09:34:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 09:34:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 09:34:30] 
[2025-11-21 09:34:30] 2025-11-21 14:33:44,036 | INFO     | ***************************************
[2025-11-21 09:34:30] 2025-11-21 14:33:44,539 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-21 09:34:30] 2025-11-21 14:33:44,552 | INFO     | sufficient remaining disk space (48391782400 B)
[2025-11-21 09:34:30] 2025-11-21 14:33:44,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 09:34:30] 2025-11-21 14:33:44,553 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 09:34:30] 2025-11-21 14:33:44,553 | INFO     | update_server=False
[2025-11-21 09:34:30] 2025-11-21 14:33:44,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 09:34:30] 2025-11-21 14:33:44,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:34:30] 2025-11-21 14:33:44,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 09:34:30] 2025-11-21 14:33:44,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:34:30] 2025-11-21 14:33:44,554 | INFO     | aborting loop
[2025-11-21 09:34:30] 2025-11-21 14:33:44,645 | INFO     | all payload control threads have been joined
[2025-11-21 09:34:30] 2025-11-21 14:33:45,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 09:34:30] 2025-11-21 14:33:45,334 | INFO     | all data control threads have been joined
[2025-11-21 09:34:30] 2025-11-21 14:33:45,558 | INFO     | [job] retrieve thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:45,558 | INFO     | [job] queue monitor thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:45,559 | INFO     | [job] job monitor thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:45,586 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:45,650 | INFO     | [payload] control thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:45,692 | INFO     | all job control threads have been joined
[2025-11-21 09:34:30] 2025-11-21 14:33:45,718 | INFO     | [payload] failed_post thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:45,801 | INFO     | [data] copytool_in thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:45,887 | INFO     | [payload] validate_post thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:46,164 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:46,285 | INFO     | [job] validate thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:46,339 | INFO     | [data] control thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:46,469 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:46,559 | INFO     | [data] copytool_out thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:46,695 | INFO     | [job] control thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:46,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:33:49,061 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 09:34:30] 2025-11-21 14:34:07,605 [wrapper] supervise_pilot (15 min periods counter: 51)
[2025-11-21 09:34:30] 2025-11-21 14:34:14,573 | INFO     | PID=2676666 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 09:34:30] 2025-11-21 14:34:14,574 | INFO     | .. there are 5 such processes running
[2025-11-21 09:34:30] 2025-11-21 14:34:14,575 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 09:34:30] 2025-11-21 14:34:14,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 09:34:30] 2025-11-21 14:34:14,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 09:34:30] 2025-11-21 14:34:24,619 | INFO     | [monitor] cgroup control has ended
[2025-11-21 09:34:30] 2025-11-21 14:34:25,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140281649760064)>', '<ExcThread(monitor, started 140280476989184)>']
[2025-11-21 09:34:30] 2025-11-21 14:34:25,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 09:34:30] 2025-11-21 14:34:25,624 | INFO     | [monitor] control thread has ended
[2025-11-21 09:34:30] 2025-11-21 14:34:30,035 | INFO     | all workflow threads have been joined
[2025-11-21 09:34:30] 2025-11-21 14:34:30,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 09:34:30] 2025-11-21 14:34:30,036 | INFO     | traces error code: 0
[2025-11-21 09:34:30] 2025-11-21 14:34:30,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 09:34:30] 2025-11-21 14:34:30,144 [wrapper] ==== pilot stdout END ====
[2025-11-21 09:34:30] 2025-11-21 14:34:30,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 09:34:30] 2025-11-21 14:34:30,151 [wrapper] pilotpid: 2676666
[2025-11-21 09:34:30] 2025-11-21 14:34:30,153 [wrapper] Pilot exit status: 0
[2025-11-21 09:34:30] 2025-11-21 14:34:30,162 [wrapper] pandaids: 6893846229
[2025-11-21 09:34:30] 2025-11-21 14:34:30,205 [wrapper] cleanup supervisor_pilot 3772832 2676667
[2025-11-21 09:34:30] 2025-11-21 14:34:30,208 [wrapper] Test setup, not cleaning
[2025-11-21 09:34:30] 2025-11-21 14:34:30,210 [wrapper] apfmon messages muted
[2025-11-21 09:34:30] 2025-11-21 14:34:30,212 [wrapper] ==== wrapper stdout END ====
[2025-11-21 09:34:30] 2025-11-21 14:34:30,214 [wrapper] ==== wrapper stderr END ====
[2025-11-21 09:34:30]  *** Error codes and diagnostics ***
[2025-11-21 09:34:30]     "exeErrorCode": 0,
[2025-11-21 09:34:30]     "exeErrorDiag": "",
[2025-11-21 09:34:30]     "pilotErrorCode": 0,
[2025-11-21 09:34:30]     "pilotErrorDiag": "",
[2025-11-21 09:34:30]  *** Listing of results directory ***
[2025-11-21 09:34:30] total 1314064
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 09:34:30] -rwx------. 1 boincer umatlas     36292 Nov 20 05:22 runpilot2-wrapper.sh
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:25 queuedata.json
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas       100 Nov 20 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 09:34:30] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 21:03 run_atlas
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas       105 Nov 20 21:03 job.xml
[2025-11-21 09:34:30] -rw-r--r--. 2 boincer umatlas 410100891 Nov 20 21:03 EVNT.47493127._000219.pool.root.1
[2025-11-21 09:34:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 21:03 start_atlas.sh
[2025-11-21 09:34:30] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 21:03 shared
[2025-11-21 09:34:30] -rw-r--r--. 2 boincer umatlas    590103 Nov 20 21:03 input.tar.gz
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas         0 Nov 20 21:03 boinc_lockfile
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas      2786 Nov 20 21:03 pandaJob.out
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas        57 Nov 20 21:03 setup.sh.local
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas    989817 Nov 20 21:04 agis_schedconf.cvmfs.json
[2025-11-21 09:34:30] drwx------. 5 boincer umatlas      4096 Nov 20 21:04 pilot3
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas       533 Nov 21 09:22 boinc_task_state.xml
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas      6663 Nov 21 09:31 init_data.xml
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas 915043085 Nov 21 09:32 HITS.47523449._002189.pool.root.1
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas      1053 Nov 21 09:33 memory_monitor_summary.json
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas   1526164 Nov 21 09:33 agis_ddmendpoints.agis.ALL.json
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas   1988784 Nov 21 09:33 log.47523449._002189.job.log.tgz.1
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas      8614 Nov 21 09:33 heartbeat.json
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas        95 Nov 21 09:34 pilot_heartbeat.json
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 09:34 boinc_mmap_file
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas        29 Nov 21 09:34 wrapper_checkpoint.txt
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas      4823 Nov 21 09:34 pilotlog.txt
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas   6273537 Nov 21 09:34 log.47523449._002189.job.log.1
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas       353 Nov 21 09:34 output.list
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas       620 Nov 21 09:34 runtime_log
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas   8284160 Nov 21 09:34 result.tar.gz
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas       659 Nov 21 09:34 uGlNDmgzGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsPHKDmoILPim.diag
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas      9338 Nov 21 09:34 runtime_log.err
[2025-11-21 09:34:30] -rw-r--r--. 1 boincer umatlas     21308 Nov 21 09:34 stderr.txt
[2025-11-21 09:34:30] HITS file was successfully produced:
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas 915043085 Nov 21 09:32 shared/HITS.pool.root.1
[2025-11-21 09:34:30]  *** Contents of shared directory: ***
[2025-11-21 09:34:30] total 1302788
[2025-11-21 09:34:30] -rw-r--r--. 2 boincer umatlas 410100891 Nov 20 21:03 ATLAS.root_0
[2025-11-21 09:34:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 21:03 start_atlas.sh
[2025-11-21 09:34:30] -rw-r--r--. 2 boincer umatlas    590103 Nov 20 21:03 input.tar.gz
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas 915043085 Nov 21 09:32 HITS.pool.root.1
[2025-11-21 09:34:30] -rw-------. 1 boincer umatlas   8284160 Nov 21 09:34 result.tar.gz
09:34:31 (2672990): run_atlas exited; CPU time 292307.490613
09:34:31 (2672990): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN