Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:39:38 (4137350): wrapper (7.7.26015): starting
20:39:38 (4137350): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 20:39:38] Arguments: --nthreads 4
[2025-11-25 20:39:38] Threads: 4
[2025-11-25 20:39:38] Checking for CVMFS
[2025-11-25 20:39:38] No cvmfs_config command found, will try listing directly
[2025-11-25 20:39:38] CVMFS is ok
[2025-11-25 20:39:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:39:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:39:38] Further information can be found at the LHC@home message board.
[2025-11-25 20:39:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:39:38] Checking for apptainer binary...
[2025-11-25 20:39:38] which: no apptainer in ((null))
[2025-11-25 20:39:38] apptainer is not installed, using version from CVMFS
[2025-11-25 20:39:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:39:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-11-25 20:39:38] apptainer works
[2025-11-25 20:39:39] Set ATHENA_PROC_NUMBER=4
[2025-11-25 20:39:39] Set ATHENA_CORE_NUMBER=4
[2025-11-25 20:39:39] Starting ATLAS job with PandaID=6893854869
[2025-11-25 20:39:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 15:48:03]  *** The last 200 lines of the pilot log: ***
[2025-11-26 15:48:03] 2025-11-26 14:42:50,207 | INFO     | time since job start (68580s) is within the limit (172800.0s)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,207 | INFO     | monitor loop #4844: job 0:6893854869 is in state 'finished'
[2025-11-26 15:48:03] 2025-11-26 14:42:50,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,290 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 15:48:03] 2025-11-26 14:42:50,300 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2425.2393437500004
[2025-11-26 15:48:03] 2025-11-26 14:42:50,314 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6893854869/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,315 | INFO     | extracted standard info from prmon json
[2025-11-26 15:48:03] 2025-11-26 14:42:50,315 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 15:48:03] 2025-11-26 14:42:50,315 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 15:48:03] 2025-11-26 14:42:50,335 | INFO     | fitting pss+swap vs Time
[2025-11-26 15:48:03] 2025-11-26 14:42:50,337 | INFO     | sum of square deviations: 440329684946.56915
[2025-11-26 15:48:03] 2025-11-26 14:42:50,365 | INFO     | sum of deviations: 961194913425.8254
[2025-11-26 15:48:03] 2025-11-26 14:42:50,366 | INFO     | mean x: 1764133870.519573
[2025-11-26 15:48:03] 2025-11-26 14:42:50,366 | INFO     | mean y: 2304378.5533807827
[2025-11-26 15:48:03] 2025-11-26 14:42:50,366 | INFO     | intersect: -3848620419.1953454
[2025-11-26 15:48:03] 2025-11-26 14:42:50,368 | INFO     | chi2: 5.064213871903653
[2025-11-26 15:48:03] 2025-11-26 14:42:50,369 | INFO     | sum of square deviations: 434479516851.56757
[2025-11-26 15:48:03] 2025-11-26 14:42:50,397 | INFO     | sum of deviations: 1261088050477.416
[2025-11-26 15:48:03] 2025-11-26 14:42:50,397 | INFO     | mean x: 1764133718.0196605
[2025-11-26 15:48:03] 2025-11-26 14:42:50,398 | INFO     | mean y: 2312196.890080429
[2025-11-26 15:48:03] 2025-11-26 14:42:50,398 | INFO     | intersect: -5118131609.8980055
[2025-11-26 15:48:03] 2025-11-26 14:42:50,399 | INFO     | chi2: 1.996376268159326
[2025-11-26 15:48:03] 2025-11-26 14:42:50,399 | INFO     | current chi2=1.996376268159326 (change=60.578752820151294 %)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,401 | INFO     | sum of square deviations: 428681396244.0646
[2025-11-26 15:48:03] 2025-11-26 14:42:50,428 | INFO     | sum of deviations: 1323449747387.7493
[2025-11-26 15:48:03] 2025-11-26 14:42:50,429 | INFO     | mean x: 1764133565.5197487
[2025-11-26 15:48:03] 2025-11-26 14:42:50,429 | INFO     | mean y: 2313835.1023339317
[2025-11-26 15:48:03] 2025-11-26 14:42:50,429 | INFO     | intersect: -5444020300.461841
[2025-11-26 15:48:03] 2025-11-26 14:42:50,430 | INFO     | chi2: 1.7773225778053032
[2025-11-26 15:48:03] 2025-11-26 14:42:50,431 | INFO     | current chi2=1.7773225778053032 (change=10.972565334890097 %)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,431 | INFO     | right removable region: 1113
[2025-11-26 15:48:03] 2025-11-26 14:42:50,432 | INFO     | sum of square deviations: 434479503431.5676
[2025-11-26 15:48:03] 2025-11-26 14:42:50,460 | INFO     | sum of deviations: 765588467245.511
[2025-11-26 15:48:03] 2025-11-26 14:42:50,461 | INFO     | mean x: 1764134023.0196605
[2025-11-26 15:48:03] 2025-11-26 14:42:50,461 | INFO     | mean y: 2309469.6586237713
[2025-11-26 15:48:03] 2025-11-26 14:42:50,461 | INFO     | intersect: -3106239154.6886334
[2025-11-26 15:48:03] 2025-11-26 14:42:50,462 | INFO     | chi2: 3.4148542316467743
[2025-11-26 15:48:03] 2025-11-26 14:42:50,463 | INFO     | current chi2=3.4148542316467743 (change=32.568917545278936 %)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,464 | INFO     | sum of square deviations: 428681369404.06464
[2025-11-26 15:48:03] 2025-11-26 14:42:50,491 | INFO     | sum of deviations: 752493652446.8203
[2025-11-26 15:48:03] 2025-11-26 14:42:50,492 | INFO     | mean x: 1764134175.5197487
[2025-11-26 15:48:03] 2025-11-26 14:42:50,492 | INFO     | mean y: 2309813.644524237
[2025-11-26 15:48:03] 2025-11-26 14:42:50,492 | INFO     | intersect: -3094395254.2443643
[2025-11-26 15:48:03] 2025-11-26 14:42:50,494 | INFO     | chi2: 3.4135134318745184
[2025-11-26 15:48:03] 2025-11-26 14:42:50,494 | INFO     | current chi2=3.4135134318745184 (change=0.03926374835652322 %)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,494 | INFO     | left removable region: 20
[2025-11-26 15:48:03] 2025-11-26 14:42:50,495 | INFO     | sum of square deviations: 404892346105.55707
[2025-11-26 15:48:03] 2025-11-26 14:42:50,522 | INFO     | sum of deviations: 1106208857797.9895
[2025-11-26 15:48:03] 2025-11-26 14:42:50,522 | INFO     | mean x: 1764134145.020128
[2025-11-26 15:48:03] 2025-11-26 14:42:50,522 | INFO     | mean y: 2319471.6367795058
[2025-11-26 15:48:03] 2025-11-26 14:42:50,523 | INFO     | intersect: -4817482227.100159
[2025-11-26 15:48:03] 2025-11-26 14:42:50,524 | INFO     | chi2: 0.10019086139967301
[2025-11-26 15:48:03] 2025-11-26 14:42:50,524 | INFO     | current memory leak: 2.73 B/s (using 1093 data points, chi2=0.10)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,525 | INFO     | could have reported an average CPU frequency of 2491 MHz (41 samples)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,526 | INFO     | ..............................
[2025-11-26 15:48:03] 2025-11-26 14:42:50,526 | INFO     | . Timing measurements:
[2025-11-26 15:48:03] 2025-11-26 14:42:50,526 | INFO     | . get job = 0 s
[2025-11-26 15:48:03] 2025-11-26 14:42:50,526 | INFO     | . initial setup = 1 s
[2025-11-26 15:48:03] 2025-11-26 14:42:50,526 | INFO     | . payload setup = 6 s
[2025-11-26 15:48:03] 2025-11-26 14:42:50,526 | INFO     | . stage-in = 0 s
[2025-11-26 15:48:03] 2025-11-26 14:42:50,526 | INFO     | . payload execution = 68542 s
[2025-11-26 15:48:03] 2025-11-26 14:42:50,526 | INFO     | . stage-out = 2 s
[2025-11-26 15:48:03] 2025-11-26 14:42:50,526 | INFO     | . log creation = 0 s
[2025-11-26 15:48:03] 2025-11-26 14:42:50,526 | INFO     | ..............................
[2025-11-26 15:48:03] 2025-11-26 14:42:50,629 | INFO     | 
[2025-11-26 15:48:03] 2025-11-26 14:42:50,630 | INFO     | job summary report
[2025-11-26 15:48:03] 2025-11-26 14:42:50,630 | INFO     | --------------------------------------------------
[2025-11-26 15:48:03] 2025-11-26 14:42:50,630 | INFO     | PanDA job id: 6893854869
[2025-11-26 15:48:03] 2025-11-26 14:42:50,630 | INFO     | task id: 47523449
[2025-11-26 15:48:03] 2025-11-26 14:42:50,630 | INFO     | errors: (none)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,630 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 15:48:03] 2025-11-26 14:42:50,630 | INFO     | pilot state: finished 
[2025-11-26 15:48:03] 2025-11-26 14:42:50,630 | INFO     | transexitcode: 0
[2025-11-26 15:48:03] 2025-11-26 14:42:50,630 | INFO     | exeerrorcode: 0
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | exeerrordiag: 
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | exitcode: 0
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | exitmsg: OK
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | cpuconsumptiontime: 268896 s
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | nevents: 1000
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | neventsw: 0
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | pid: 4148360
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | pgrp: 4148360
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | corecount: 4
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | event service: False
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | sizes: {0: 2284155, 1: 2284354, 6: 2284616, 12: 2284644, 68553: 2341049, 68555: 2350065, 68556: 2350249, 68564: 2350591}
[2025-11-26 15:48:03] 2025-11-26 14:42:50,631 | INFO     | --------------------------------------------------
[2025-11-26 15:48:03] 2025-11-26 14:42:50,632 | INFO     | 
[2025-11-26 15:48:03] 2025-11-26 14:42:50,632 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-11-26 15:48:03] 2025-11-26 14:42:50,653 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,654 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,654 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,654 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,655 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,655 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 15:48:03] 2025-11-26 14:42:50,656 | INFO     | job 6893854869 has completed (purged errors)
[2025-11-26 15:48:03] 2025-11-26 14:42:50,656 | INFO     | overall cleanup function is called
[2025-11-26 15:48:03] 2025-11-26 14:42:51,670 | INFO     | --- collectZombieJob: --- 10, [4148360]
[2025-11-26 15:48:03] 2025-11-26 14:42:51,670 | INFO     | zombie collector waiting for pid 4148360
[2025-11-26 15:48:03] 2025-11-26 14:42:51,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 15:48:03] 2025-11-26 14:42:51,670 | INFO     | collected zombie processes
[2025-11-26 15:48:03] 2025-11-26 14:42:51,671 | INFO     | will attempt to kill all subprocesses of pid=4148360
[2025-11-26 15:48:03] 2025-11-26 14:42:52,102 | INFO     | process IDs to be killed: [4148360] (in reverse order)
[2025-11-26 15:48:03] 2025-11-26 14:42:52,228 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 15:48:03] 2025-11-26 14:42:52,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 15:48:03] 2025-11-26 14:42:52,244 | INFO     | did not find any defunct processes belonging to 4148360
[2025-11-26 15:48:03] 2025-11-26 14:42:52,258 | INFO     | did not find any defunct processes belonging to 4148360
[2025-11-26 15:48:03] 2025-11-26 14:42:52,260 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 15:48:03] 2025-11-26 14:42:52,260 | INFO     | ready for new job
[2025-11-26 15:48:03] 2025-11-26 14:42:52,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 15:48:03] 2025-11-26 14:42:52,267 | INFO     | ***************************************
[2025-11-26 15:48:03] 2025-11-26 14:42:52,267 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 15:48:03] 2025-11-26 14:42:52,267 | INFO     | ***************************************
[2025-11-26 15:48:03] 2025-11-26 14:42:52,267 | INFO     | 
[2025-11-26 15:48:03] 2025-11-26 14:42:52,272 | INFO     | architecture information:
[2025-11-26 15:48:03] 2025-11-26 14:42:52,272 | INFO     | executing command: cat /etc/os-release
[2025-11-26 15:48:03] 2025-11-26 14:42:52,289 | INFO     | cat /etc/os-release:
[2025-11-26 15:48:03] NAME="CentOS Linux"
[2025-11-26 15:48:03] VERSION="7 (Core)"
[2025-11-26 15:48:03] ID="centos"
[2025-11-26 15:48:03] ID_LIKE="rhel fedora"
[2025-11-26 15:48:03] VERSION_ID="7"
[2025-11-26 15:48:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 15:48:03] ANSI_COLOR="0;31"
[2025-11-26 15:48:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 15:48:03] HOME_URL="https://www.centos.org/"
[2025-11-26 15:48:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 15:48:03] 
[2025-11-26 15:48:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 15:48:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 15:48:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 15:48:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 15:48:03] 
[2025-11-26 15:48:03] 2025-11-26 14:42:52,290 | INFO     | ***************************************
[2025-11-26 15:48:03] 2025-11-26 14:42:52,793 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-11-26 15:48:03] 2025-11-26 14:42:52,812 | INFO     | sufficient remaining disk space (688048308224 B)
[2025-11-26 15:48:03] 2025-11-26 14:42:52,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 15:48:03] 2025-11-26 14:42:52,813 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 15:48:03] 2025-11-26 14:42:52,813 | INFO     | update_server=False
[2025-11-26 15:48:03] 2025-11-26 14:42:52,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 15:48:03] 2025-11-26 14:42:52,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 15:48:03] 2025-11-26 14:42:52,901 | INFO     | all job control threads have been joined
[2025-11-26 15:48:03] 2025-11-26 14:42:53,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 15:48:03] 2025-11-26 14:42:53,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:48:03] 2025-11-26 14:42:53,718 | INFO     | aborting loop
[2025-11-26 15:48:03] 2025-11-26 14:42:53,768 | INFO     | all payload control threads have been joined
[2025-11-26 15:48:03] 2025-11-26 14:42:53,819 | INFO     | [job] retrieve thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:53,904 | INFO     | all data control threads have been joined
[2025-11-26 15:48:03] 2025-11-26 14:42:53,908 | INFO     | [job] control thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:53,968 | INFO     | [data] copytool_in thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:54,051 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:54,074 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:54,440 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:54,616 | INFO     | [job] validate thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:54,724 | INFO     | [job] job monitor thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:54,774 | INFO     | [payload] control thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:54,804 | INFO     | [payload] failed_post thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:54,818 | INFO     | [data] copytool_out thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:54,909 | INFO     | [data] control thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:55,081 | INFO     | [payload] validate_post thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:55,138 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:55,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:48:03] 2025-11-26 14:42:56,643 | INFO     | [job] queue monitor thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:42:57,549 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 15:48:03] 2025-11-26 14:43:23,760 | INFO     | PID=4141179 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 15:48:03] 2025-11-26 14:43:23,760 | INFO     | .. there are 4 such processes running
[2025-11-26 15:48:03] 2025-11-26 14:43:23,760 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 15:48:03] 2025-11-26 14:43:23,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 15:48:03] 2025-11-26 14:43:23,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 15:48:03] 2025-11-26 14:43:43,807 | INFO     | [monitor] cgroup control has ended
[2025-11-26 15:48:03] 2025-11-26 14:43:44,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23376111109952)>', '<ExcThread(monitor, started 23375875380992)>']
[2025-11-26 15:48:03] 2025-11-26 14:43:44,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 15:48:03] 2025-11-26 14:43:44,862 | INFO     | [monitor] control thread has ended
[2025-11-26 15:48:03] 2025-11-26 14:43:49,147 | INFO     | all workflow threads have been joined
[2025-11-26 15:48:03] 2025-11-26 14:43:49,148 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 15:48:03] 2025-11-26 14:43:49,148 | INFO     | traces error code: 0
[2025-11-26 15:48:03] 2025-11-26 14:43:49,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 15:48:03] 2025-11-26 14:43:49,393 [wrapper] ==== pilot stdout END ====
[2025-11-26 15:48:03] 2025-11-26 14:43:49,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 15:48:03] 2025-11-26 14:43:49,400 [wrapper] pilotpid: 4141179
[2025-11-26 15:48:03] 2025-11-26 14:43:49,402 [wrapper] Pilot exit status: 0
[2025-11-26 15:48:03] 2025-11-26 14:43:49,414 [wrapper] pandaids: 6893854869
[2025-11-26 15:48:03] 2025-11-26 14:43:49,504 [wrapper] cleanup supervisor_pilot  833616 4141180
[2025-11-26 15:48:03] 2025-11-26 14:43:49,508 [wrapper] Test setup, not cleaning
[2025-11-26 15:48:03] 2025-11-26 14:43:49,512 [wrapper] apfmon messages muted
[2025-11-26 15:48:03] 2025-11-26 14:43:49,515 [wrapper] ==== wrapper stdout END ====
[2025-11-26 15:48:03] 2025-11-26 14:43:49,518 [wrapper] ==== wrapper stderr END ====
[2025-11-26 15:48:03]  *** Error codes and diagnostics ***
[2025-11-26 15:48:03]     "exeErrorCode": 0,
[2025-11-26 15:48:03]     "exeErrorDiag": "",
[2025-11-26 15:48:03]     "pilotErrorCode": 0,
[2025-11-26 15:48:03]     "pilotErrorDiag": "",
[2025-11-26 15:48:03]  *** Listing of results directory ***
[2025-11-26 15:48:03] total 1332724
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:26 queuedata.json
[2025-11-26 15:48:03] -rwx------ 1 boinc boinc     36292 Nov 20 13:26 runpilot2-wrapper.sh
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc       100 Nov 25 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 15:48:03] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 20:39 run_atlas
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc       105 Nov 25 20:39 job.xml
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc      6635 Nov 25 20:39 init_data.xml
[2025-11-26 15:48:03] -rw-r--r-- 2 boinc boinc 408810051 Nov 25 20:39 EVNT.47493127._000427.pool.root.1
[2025-11-26 15:48:03] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:39 start_atlas.sh
[2025-11-26 15:48:03] drwxrwx--x 2 boinc boinc      4096 Nov 25 20:39 shared
[2025-11-26 15:48:03] -rw-r--r-- 2 boinc boinc    590099 Nov 25 20:39 input.tar.gz
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc         0 Nov 25 20:39 boinc_lockfile
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc      2786 Nov 25 20:39 pandaJob.out
[2025-11-26 15:48:03] -rw------- 1 boinc boinc    991893 Nov 25 20:39 agis_schedconf.cvmfs.json
[2025-11-26 15:48:03] drwx------ 5 boinc boinc      4096 Nov 25 20:39 pilot3
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc       532 Nov 26 15:32 boinc_task_state.xml
[2025-11-26 15:48:03] -rw------- 1 boinc boinc 929224652 Nov 26 15:41 HITS.47523449._004266.pool.root.1
[2025-11-26 15:48:03] -rw------- 1 boinc boinc      1046 Nov 26 15:42 memory_monitor_summary.json
[2025-11-26 15:48:03] -rw------- 1 boinc boinc   1516240 Nov 26 15:42 agis_ddmendpoints.agis.ALL.json
[2025-11-26 15:48:03] -rw------- 1 boinc boinc   1834362 Nov 26 15:42 log.47523449._004266.job.log.tgz.1
[2025-11-26 15:48:03] -rw------- 1 boinc boinc        95 Nov 26 15:42 pilot_heartbeat.json
[2025-11-26 15:48:03] -rw------- 1 boinc boinc      8644 Nov 26 15:42 heartbeat.json
[2025-11-26 15:48:03] -rw------- 1 boinc boinc      4833 Nov 26 15:43 pilotlog.txt
[2025-11-26 15:48:03] -rw------- 1 boinc boinc   9543468 Nov 26 15:43 log.47523449._004266.job.log.1
[2025-11-26 15:48:03] -rw------- 1 boinc boinc       353 Nov 26 15:43 output.list
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc       620 Nov 26 15:43 runtime_log
[2025-11-26 15:48:03] -rw------- 1 boinc boinc  11397120 Nov 26 15:43 result.tar.gz
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc      9206 Nov 26 15:43 runtime_log.err
[2025-11-26 15:48:03] -rw------- 1 boinc boinc       671 Nov 26 15:43 92uKDmXvIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTcGKDmZK3YQm.diag
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc        28 Nov 26 15:48 wrapper_checkpoint.txt
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc      8192 Nov 26 15:48 boinc_mmap_file
[2025-11-26 15:48:03] -rw-r--r-- 1 boinc boinc     21133 Nov 26 15:48 stderr.txt
[2025-11-26 15:48:03] HITS file was successfully produced:
[2025-11-26 15:48:03] -rw------- 1 boinc boinc 929224652 Nov 26 15:41 shared/HITS.pool.root.1
[2025-11-26 15:48:03]  *** Contents of shared directory: ***
[2025-11-26 15:48:03] total 1318416
[2025-11-26 15:48:03] -rw-r--r-- 2 boinc boinc 408810051 Nov 25 20:39 ATLAS.root_0
[2025-11-26 15:48:03] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:39 start_atlas.sh
[2025-11-26 15:48:03] -rw-r--r-- 2 boinc boinc    590099 Nov 25 20:39 input.tar.gz
[2025-11-26 15:48:03] -rw------- 1 boinc boinc 929224652 Nov 26 15:41 HITS.pool.root.1
[2025-11-26 15:48:03] -rw------- 1 boinc boinc  11397120 Nov 26 15:43 result.tar.gz
15:48:05 (4137350): run_atlas exited; CPU time 271737.712097
15:48:05 (4137350): called boinc_finish(0)

</stderr_txt>
]]>

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