Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:39:37 (2486333): wrapper (7.7.26015): starting
03:39:37 (2486333): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 03:39:37] Arguments: --nthreads 4
[2025-11-21 03:39:37] Threads: 4
[2025-11-21 03:39:37] Checking for CVMFS
[2025-11-21 03:39:37] No cvmfs_config command found, will try listing directly
[2025-11-21 03:39:37] CVMFS is ok
[2025-11-21 03:39:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 03:39:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 03:39:37] Further information can be found at the LHC@home message board.
[2025-11-21 03:39:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 03:39:37] Checking for apptainer binary...
[2025-11-21 03:39:37] which: no apptainer in ((null))
[2025-11-21 03:39:37] apptainer is not installed, using version from CVMFS
[2025-11-21 03:39:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 03:39:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-11-21 03:39:38] apptainer works
[2025-11-21 03:39:38] Set ATHENA_PROC_NUMBER=4
[2025-11-21 03:39:38] Set ATHENA_CORE_NUMBER=4
[2025-11-21 03:39:38] Starting ATLAS job with PandaID=6893864490
[2025-11-21 03:39:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:52:11]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:52:11] 2025-11-21 21:50:11,412 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2669.590765625001
[2025-11-21 22:52:11] 2025-11-21 21:50:11,424 | INFO     | using path: /scratch/boinc/var/slot64/slots/1/PanDA_Pilot-6893864490/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,425 | INFO     | extracted standard info from prmon json
[2025-11-21 22:52:11] 2025-11-21 21:50:11,425 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 22:52:11] 2025-11-21 21:50:11,425 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 22:52:11] 2025-11-21 21:50:11,445 | INFO     | fitting pss+swap vs Time
[2025-11-21 22:52:11] 2025-11-21 21:50:11,447 | INFO     | sum of square deviations: 448606864304.8009
[2025-11-21 22:52:11] 2025-11-21 21:50:11,473 | INFO     | sum of deviations: 1055140376145.275
[2025-11-21 22:52:11] 2025-11-21 21:50:11,473 | INFO     | mean x: 1763727281.0132625
[2025-11-21 22:52:11] 2025-11-21 21:50:11,474 | INFO     | mean y: 2284258.248452697
[2025-11-21 22:52:11] 2025-11-21 21:50:11,474 | INFO     | intersect: -4146069266.3681374
[2025-11-21 22:52:11] 2025-11-21 21:50:11,475 | INFO     | chi2: 3.7815838931997274
[2025-11-21 22:52:11] 2025-11-21 21:50:11,477 | INFO     | sum of square deviations: 442683436887.3001
[2025-11-21 22:52:11] 2025-11-21 21:50:11,489 | INFO     | monitor loop #4914: job 0:6893864490 is in state 'finished'
[2025-11-21 22:52:11] 2025-11-21 21:50:11,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,504 | INFO     | sum of deviations: 1274073422174.3438
[2025-11-21 22:52:11] 2025-11-21 21:50:11,504 | INFO     | mean x: 1763727128.5133214
[2025-11-21 22:52:11] 2025-11-21 21:50:11,504 | INFO     | mean y: 2289891.210479574
[2025-11-21 22:52:11] 2025-11-21 21:50:11,505 | INFO     | intersect: -5073838265.305065
[2025-11-21 22:52:11] 2025-11-21 21:50:11,506 | INFO     | chi2: 2.000655405729069
[2025-11-21 22:52:11] 2025-11-21 21:50:11,506 | INFO     | current chi2=2.000655405729069 (change=47.094776627149045 %)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,508 | INFO     | sum of square deviations: 436812382544.79846
[2025-11-21 22:52:11] 2025-11-21 21:50:11,534 | INFO     | sum of deviations: 1339595310526.3516
[2025-11-21 22:52:11] 2025-11-21 21:50:11,534 | INFO     | mean x: 1763726976.013381
[2025-11-21 22:52:11] 2025-11-21 21:50:11,534 | INFO     | mean y: 2291592.1097234613
[2025-11-21 22:52:11] 2025-11-21 21:50:11,534 | INFO     | intersect: -5406621892.3289585
[2025-11-21 22:52:11] 2025-11-21 21:50:11,536 | INFO     | chi2: 1.7908303661361835
[2025-11-21 22:52:11] 2025-11-21 21:50:11,536 | INFO     | current chi2=1.7908303661361835 (change=10.487815092595726 %)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,536 | INFO     | right removable region: 1120
[2025-11-21 22:52:11] 2025-11-21 21:50:11,537 | INFO     | sum of square deviations: 442683427737.3001
[2025-11-21 22:52:11] 2025-11-21 21:50:11,564 | INFO     | sum of deviations: 860618682508.4731
[2025-11-21 22:52:11] 2025-11-21 21:50:11,564 | INFO     | mean x: 1763727433.5133214
[2025-11-21 22:52:11] 2025-11-21 21:50:11,564 | INFO     | mean y: 2289258.435168739
[2025-11-21 22:52:11] 2025-11-21 21:50:11,564 | INFO     | intersect: -3426564601.969664
[2025-11-21 22:52:11] 2025-11-21 21:50:11,566 | INFO     | chi2: 2.1220051282150827
[2025-11-21 22:52:11] 2025-11-21 21:50:11,566 | INFO     | current chi2=2.1220051282150827 (change=43.885811127157574 %)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,567 | INFO     | sum of square deviations: 436812364244.79846
[2025-11-21 22:52:11] 2025-11-21 21:50:11,593 | INFO     | sum of deviations: 844113715580.2532
[2025-11-21 22:52:11] 2025-11-21 21:50:11,593 | INFO     | mean x: 1763727586.013381
[2025-11-21 22:52:11] 2025-11-21 21:50:11,594 | INFO     | mean y: 2289686.78322926
[2025-11-21 22:52:11] 2025-11-21 21:50:11,594 | INFO     | intersect: -3406008172.356123
[2025-11-21 22:52:11] 2025-11-21 21:50:11,595 | INFO     | chi2: 2.1204580166464027
[2025-11-21 22:52:11] 2025-11-21 21:50:11,595 | INFO     | current chi2=2.1204580166464027 (change=0.07290800328938814 %)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,595 | INFO     | left removable region: 20
[2025-11-21 22:52:11] 2025-11-21 21:50:11,597 | INFO     | sum of square deviations: 412720583214.79626
[2025-11-21 22:52:11] 2025-11-21 21:50:11,622 | INFO     | sum of deviations: 1117910364232.8037
[2025-11-21 22:52:11] 2025-11-21 21:50:11,623 | INFO     | mean x: 1763727555.5136364
[2025-11-21 22:52:11] 2025-11-21 21:50:11,623 | INFO     | mean y: 2297191.6463636365
[2025-11-21 22:52:11] 2025-11-21 21:50:11,623 | INFO     | intersect: -4775001043.962923
[2025-11-21 22:52:11] 2025-11-21 21:50:11,624 | INFO     | chi2: 0.1124971932417522
[2025-11-21 22:52:11] 2025-11-21 21:50:11,625 | INFO     | current memory leak: 2.71 B/s (using 1100 data points, chi2=0.11)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,626 | INFO     | could have reported an average CPU frequency of 2522 MHz (42 samples)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,626 | INFO     | ..............................
[2025-11-21 22:52:11] 2025-11-21 21:50:11,626 | INFO     | . Timing measurements:
[2025-11-21 22:52:11] 2025-11-21 21:50:11,626 | INFO     | . get job = 0 s
[2025-11-21 22:52:11] 2025-11-21 21:50:11,626 | INFO     | . initial setup = 1 s
[2025-11-21 22:52:11] 2025-11-21 21:50:11,627 | INFO     | . payload setup = 6 s
[2025-11-21 22:52:11] 2025-11-21 21:50:11,627 | INFO     | . stage-in = 0 s
[2025-11-21 22:52:11] 2025-11-21 21:50:11,627 | INFO     | . payload execution = 68989 s
[2025-11-21 22:52:11] 2025-11-21 21:50:11,627 | INFO     | . stage-out = 3 s
[2025-11-21 22:52:11] 2025-11-21 21:50:11,627 | INFO     | . log creation = 0 s
[2025-11-21 22:52:11] 2025-11-21 21:50:11,627 | INFO     | ..............................
[2025-11-21 22:52:11] 2025-11-21 21:50:11,728 | INFO     | 
[2025-11-21 22:52:11] 2025-11-21 21:50:11,728 | INFO     | job summary report
[2025-11-21 22:52:11] 2025-11-21 21:50:11,728 | INFO     | --------------------------------------------------
[2025-11-21 22:52:11] 2025-11-21 21:50:11,728 | INFO     | PanDA job id: 6893864490
[2025-11-21 22:52:11] 2025-11-21 21:50:11,728 | INFO     | task id: 47523449
[2025-11-21 22:52:11] 2025-11-21 21:50:11,728 | INFO     | errors: (none)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | pilot state: finished 
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | transexitcode: 0
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | exeerrorcode: 0
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | exeerrordiag: 
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | exitcode: 0
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | exitmsg: OK
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | cpuconsumptiontime: 272095 s
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | nevents: 1000
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | neventsw: 0
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | pid: 2497356
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | pgrp: 2497356
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | corecount: 4
[2025-11-21 22:52:11] 2025-11-21 21:50:11,729 | INFO     | event service: False
[2025-11-21 22:52:11] 2025-11-21 21:50:11,730 | INFO     | sizes: {0: 2298647, 1: 2298846, 5: 2299108, 11: 2299164, 68996: 2355381, 69001: 2364581, 69007: 2364771}
[2025-11-21 22:52:11] 2025-11-21 21:50:11,730 | INFO     | --------------------------------------------------
[2025-11-21 22:52:11] 2025-11-21 21:50:11,730 | INFO     | 
[2025-11-21 22:52:11] 2025-11-21 21:50:11,730 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2025-11-21 22:52:11] 2025-11-21 21:50:11,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 22:52:11] 2025-11-21 21:50:11,754 | INFO     | job 6893864490 has completed (purged errors)
[2025-11-21 22:52:11] 2025-11-21 21:50:11,754 | INFO     | overall cleanup function is called
[2025-11-21 22:52:11] 2025-11-21 21:50:12,767 | INFO     | --- collectZombieJob: --- 10, [2497356]
[2025-11-21 22:52:11] 2025-11-21 21:50:12,768 | INFO     | zombie collector waiting for pid 2497356
[2025-11-21 22:52:11] 2025-11-21 21:50:12,768 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 22:52:11] 2025-11-21 21:50:12,768 | INFO     | collected zombie processes
[2025-11-21 22:52:11] 2025-11-21 21:50:12,768 | INFO     | will attempt to kill all subprocesses of pid=2497356
[2025-11-21 22:52:11] 2025-11-21 21:50:13,190 | INFO     | process IDs to be killed: [2497356] (in reverse order)
[2025-11-21 22:52:11] 2025-11-21 21:50:13,312 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 22:52:11] 2025-11-21 21:50:13,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 22:52:11] 2025-11-21 21:50:13,326 | INFO     | did not find any defunct processes belonging to 2497356
[2025-11-21 22:52:11] 2025-11-21 21:50:13,339 | INFO     | did not find any defunct processes belonging to 2497356
[2025-11-21 22:52:11] 2025-11-21 21:50:13,340 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 22:52:11] 2025-11-21 21:50:13,341 | INFO     | ready for new job
[2025-11-21 22:52:11] 2025-11-21 21:50:13,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 22:52:11] 2025-11-21 21:50:13,347 | INFO     | ***************************************
[2025-11-21 22:52:11] 2025-11-21 21:50:13,347 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 22:52:11] 2025-11-21 21:50:13,347 | INFO     | ***************************************
[2025-11-21 22:52:11] 2025-11-21 21:50:13,347 | INFO     | 
[2025-11-21 22:52:11] 2025-11-21 21:50:13,351 | INFO     | architecture information:
[2025-11-21 22:52:11] 2025-11-21 21:50:13,352 | INFO     | executing command: cat /etc/os-release
[2025-11-21 22:52:11] 2025-11-21 21:50:13,367 | INFO     | cat /etc/os-release:
[2025-11-21 22:52:11] NAME="CentOS Linux"
[2025-11-21 22:52:11] VERSION="7 (Core)"
[2025-11-21 22:52:11] ID="centos"
[2025-11-21 22:52:11] ID_LIKE="rhel fedora"
[2025-11-21 22:52:11] VERSION_ID="7"
[2025-11-21 22:52:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 22:52:11] ANSI_COLOR="0;31"
[2025-11-21 22:52:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 22:52:11] HOME_URL="https://www.centos.org/"
[2025-11-21 22:52:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 22:52:11] 
[2025-11-21 22:52:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 22:52:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 22:52:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 22:52:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 22:52:11] 
[2025-11-21 22:52:11] 2025-11-21 21:50:13,367 | INFO     | ***************************************
[2025-11-21 22:52:11] 2025-11-21 21:50:13,870 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2025-11-21 22:52:11] 2025-11-21 21:50:13,889 | INFO     | sufficient remaining disk space (666656309248 B)
[2025-11-21 22:52:11] 2025-11-21 21:50:13,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:52:11] 2025-11-21 21:50:13,889 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:52:11] 2025-11-21 21:50:13,890 | INFO     | update_server=False
[2025-11-21 22:52:11] 2025-11-21 21:50:13,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:52:11] 2025-11-21 21:50:13,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:52:11] 2025-11-21 21:50:14,006 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 22:52:11] 2025-11-21 21:50:14,007 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 22:52:11] 2025-11-21 21:50:14,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:52:11] 2025-11-21 21:50:14,007 | INFO     | will abort loop
[2025-11-21 22:52:11] 2025-11-21 21:50:14,566 | INFO     | all payload control threads have been joined
[2025-11-21 22:52:11] 2025-11-21 21:50:14,824 | INFO     | all data control threads have been joined
[2025-11-21 22:52:11] 2025-11-21 21:50:14,894 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:14,902 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:14,915 | INFO     | [job] validate thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:15,010 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:15,054 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:15,085 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:15,214 | INFO     | all job control threads have been joined
[2025-11-21 22:52:11] 2025-11-21 21:50:15,567 | INFO     | [payload] control thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:15,623 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:15,624 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:15,830 | INFO     | [data] control thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:15,896 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:16,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:52:11] 2025-11-21 21:50:16,032 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:16,218 | INFO     | [job] control thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:16,284 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:16,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:52:11] 2025-11-21 21:50:17,744 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:20,025 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:52:11] 2025-11-21 21:50:43,033 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:52:11] 2025-11-21 21:50:43,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22367337158464)>', '<ExcThread(monitor, started 22367099127552)>']
[2025-11-21 22:52:11] 2025-11-21 21:50:44,606 | INFO     | PID=2490131 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-21 22:52:11] 2025-11-21 21:50:44,606 | INFO     | .. there are 3 such processes running
[2025-11-21 22:52:11] 2025-11-21 21:50:44,607 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:52:11] 2025-11-21 21:50:44,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:52:11] 2025-11-21 21:50:44,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:52:11] 2025-11-21 21:50:44,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:52:11] 2025-11-21 21:50:44,607 | INFO     | [monitor] control thread has ended
[2025-11-21 22:52:11] 2025-11-21 21:50:48,663 | INFO     | all workflow threads have been joined
[2025-11-21 22:52:11] 2025-11-21 21:50:48,663 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:52:11] 2025-11-21 21:50:48,663 | INFO     | traces error code: 0
[2025-11-21 22:52:11] 2025-11-21 21:50:48,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:52:11] 2025-11-21 21:50:48,819 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:52:11] 2025-11-21 21:50:48,822 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:52:11] 2025-11-21 21:50:48,825 [wrapper] pilotpid: 2490131
[2025-11-21 22:52:11] 2025-11-21 21:50:48,828 [wrapper] Pilot exit status: 0
[2025-11-21 22:52:11] 2025-11-21 21:50:48,839 [wrapper] pandaids: 6893864490
[2025-11-21 22:52:11] 2025-11-21 21:50:48,918 [wrapper] cleanup supervisor_pilot 3557041 2490132
[2025-11-21 22:52:11] 2025-11-21 21:50:48,921 [wrapper] Test setup, not cleaning
[2025-11-21 22:52:11] 2025-11-21 21:50:48,924 [wrapper] apfmon messages muted
[2025-11-21 22:52:11] 2025-11-21 21:50:48,926 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:52:11] 2025-11-21 21:50:48,929 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:52:11]  *** Error codes and diagnostics ***
[2025-11-21 22:52:11]     "exeErrorCode": 0,
[2025-11-21 22:52:11]     "exeErrorDiag": "",
[2025-11-21 22:52:11]     "pilotErrorCode": 0,
[2025-11-21 22:52:11]     "pilotErrorDiag": "",
[2025-11-21 22:52:11]  *** Listing of results directory ***
[2025-11-21 22:52:11] total 1343020
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:06 pilot3.tar.gz
[2025-11-21 22:52:11] -rwx------ 1 boinc boinc     36292 Nov 20 15:27 runpilot2-wrapper.sh
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:27 queuedata.json
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc       100 Nov 21 02:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:52:11] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 02:22 run_atlas
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc       105 Nov 21 02:22 job.xml
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc      6633 Nov 21 03:39 init_data.xml
[2025-11-21 22:52:11] -rw-r--r-- 2 boinc boinc 409481476 Nov 21 03:39 EVNT.47493127._000609.pool.root.1
[2025-11-21 22:52:11] -rw-r--r-- 2 boinc boinc     15847 Nov 21 03:39 start_atlas.sh
[2025-11-21 22:52:11] drwxrwx--x 2 boinc boinc      4096 Nov 21 03:39 shared
[2025-11-21 22:52:11] -rw-r--r-- 2 boinc boinc    590095 Nov 21 03:39 input.tar.gz
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc         0 Nov 21 03:39 boinc_lockfile
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc      2786 Nov 21 03:39 pandaJob.out
[2025-11-21 22:52:11] -rw------- 1 boinc boinc    989817 Nov 21 03:39 agis_schedconf.cvmfs.json
[2025-11-21 22:52:11] drwx------ 5 boinc boinc      4096 Nov 21 03:39 pilot3
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc       530 Nov 21 22:39 boinc_task_state.xml
[2025-11-21 22:52:11] -rw------- 1 boinc boinc 938923166 Nov 21 22:49 HITS.47523449._006088.pool.root.1
[2025-11-21 22:52:11] -rw------- 1 boinc boinc      1045 Nov 21 22:50 memory_monitor_summary.json
[2025-11-21 22:52:11] -rw------- 1 boinc boinc   1526164 Nov 21 22:50 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:52:11] -rw------- 1 boinc boinc   1837174 Nov 21 22:50 log.47523449._006088.job.log.tgz.1
[2025-11-21 22:52:11] -rw------- 1 boinc boinc      8630 Nov 21 22:50 heartbeat.json
[2025-11-21 22:52:11] -rw------- 1 boinc boinc        95 Nov 21 22:50 pilot_heartbeat.json
[2025-11-21 22:52:11] -rw------- 1 boinc boinc      5020 Nov 21 22:50 pilotlog.txt
[2025-11-21 22:52:11] -rw------- 1 boinc boinc   9622844 Nov 21 22:50 log.47523449._006088.job.log.1
[2025-11-21 22:52:11] -rw------- 1 boinc boinc       353 Nov 21 22:50 output.list
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc       620 Nov 21 22:50 runtime_log
[2025-11-21 22:52:11] -rw------- 1 boinc boinc  11479040 Nov 21 22:50 result.tar.gz
[2025-11-21 22:52:11] -rw------- 1 boinc boinc       671 Nov 21 22:50 sbKMDmCoKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDms4HKDm0DLcLn.diag
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc      9206 Nov 21 22:50 runtime_log.err
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc        28 Nov 21 22:52 wrapper_checkpoint.txt
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc      8192 Nov 21 22:52 boinc_mmap_file
[2025-11-21 22:52:11] -rw-r--r-- 1 boinc boinc     21126 Nov 21 22:52 stderr.txt
[2025-11-21 22:52:11] HITS file was successfully produced:
[2025-11-21 22:52:11] -rw------- 1 boinc boinc 938923166 Nov 21 22:49 shared/HITS.pool.root.1
[2025-11-21 22:52:11]  *** Contents of shared directory: ***
[2025-11-21 22:52:11] total 1328624
[2025-11-21 22:52:11] -rw-r--r-- 2 boinc boinc 409481476 Nov 21 03:39 ATLAS.root_0
[2025-11-21 22:52:11] -rw-r--r-- 2 boinc boinc     15847 Nov 21 03:39 start_atlas.sh
[2025-11-21 22:52:11] -rw-r--r-- 2 boinc boinc    590095 Nov 21 03:39 input.tar.gz
[2025-11-21 22:52:11] -rw------- 1 boinc boinc 938923166 Nov 21 22:49 HITS.pool.root.1
[2025-11-21 22:52:11] -rw------- 1 boinc boinc  11479040 Nov 21 22:50 result.tar.gz
22:52:13 (2486333): run_atlas exited; CPU time 274868.578322
22:52:13 (2486333): called boinc_finish(0)

</stderr_txt>
]]>

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